TWI250209B - A novel G protein-coupled receptor, GAVE8 - Google Patents
A novel G protein-coupled receptor, GAVE8 Download PDFInfo
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- TWI250209B TWI250209B TW091116166A TW91116166A TWI250209B TW I250209 B TWI250209 B TW I250209B TW 091116166 A TW091116166 A TW 091116166A TW 91116166 A TW91116166 A TW 91116166A TW I250209 B TWI250209 B TW I250209B
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/705—Receptors; Cell surface antigens; Cell surface determinants
- C07K14/72—Receptors; Cell surface antigens; Cell surface determinants for hormones
- C07K14/723—G protein coupled receptor, e.g. TSHR-thyrotropin-receptor, LH/hCG receptor, FSH receptor
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P1/00—Drugs for disorders of the alimentary tract or the digestive system
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P11/00—Drugs for disorders of the respiratory system
- A61P11/08—Bronchodilators
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P9/00—Drugs for disorders of the cardiovascular system
- A61P9/04—Inotropic agents, i.e. stimulants of cardiac contraction; Drugs for heart failure
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P9/00—Drugs for disorders of the cardiovascular system
- A61P9/08—Vasodilators for multiple indications
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
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Abstract
Description
1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(彳) 發明背景 與G蛋白質偶合的受體(GPCR)是屬於一群負責細胞訊 息傳遞的完整型膜蛋白。G P C R會對各種細胞外的信號, 包括:神經傳送素、荷爾蒙、氣味劑及光產生反應,並能 將信號跨越細胞膜轉導,在細胞內引發二級傳訊者反應。 目前使用的許多治療藥物係標定GPCR,因爲該受體可間 接中介各種生理反應,包括:血管舒張、心跳速率、支氣 管擴張、內分泌分泌及腸蠕動。 GPCR之特徵在於具有細胞外的配體結合結構區、橫 越細胞膜之結構區及與信號相關的細胞元件交互作用的細 胞內結構區。受體的功能(例如結合配體與G蛋白質)係與 某些關鍵位置上的胺基酸相關。 經分子選殖可確認一個G P C R次類群,即爲習知的內 皮分化基因(Edg)。Edg GPCR次類群之胺基酸序列與該類 群有31%至34%之相似性,但含有二個結構及功能非常相 似的同源結構區。其中一個同源結構區,包括 Edg-2、 Edg-4、Edg-7及Edg-8蛋白質,可結合溶血磷脂酸(LP A) 但無法結合鞘類磷脂。第二個同源結構區,包含Edg-1、 Edg-3以及Edg-5,可結合鞘胺醇-1-磷酸鹽(SIP或SPP), 但無法結合 LPA(Goetzl et a I., Ad v Exp Med Biol(1 999)469 : 259-264) 〇 s I P爲有效力的、細胞外的溶血脂質磷酸中介物,其係 於(例如)血小板活化期間釋出(Moser et al.,J Cell Bi 01(1 992)1 1 6 : 1 51 7-1 526)。SIP 可引起細胞各種反應, (請先閲讀背面之注意事項再填寫本頁) 裝· 訂 P. 本纸張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -4- 1250209 A7 B7 五、發明説明(2) 其中最顯著的 是細胞增 殖 (Zhang et a I. ,J Cell B i ο I (1 9 9 1 ) 1 1 4 : 1 5 5-1 67; Bornfeldt et a I., J Cell Bi 〇1(1995)130 : 1 93-206; 以 及 Berger et a I., Mol1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Office Staff Consumer Cooperative Printed V. Inventive Note (彳) Background of the Invention The G protein-coupled receptor (GPCR) is a group of intact membrane proteins responsible for cellular signaling. G P C R reacts to a variety of extracellular signals, including: neurotransmitters, hormones, odorants, and light, and transduces signals across cell membranes, triggering a secondary messenger response within the cell. Many of the currently used therapeutic drugs calibrate GPCRs because the receptor can indirectly mediate a variety of physiological responses including: vasodilation, heart rate, bronchodilation, endocrine secretion, and bowel movements. GPCRs are characterized by an extracellular ligand binding domain, a structural region that traverses the cell membrane, and an intracellular domain that interacts with signal-related cellular elements. The function of the receptor (e.g., binding ligand to G protein) is associated with amino acids at certain critical positions. A G P C R subgroup can be identified by molecular selection, which is a known endodermal differentiation gene (Edg). The amino acid sequence of the Edg GPCR subgroup has 31% to 34% similarity to this group, but contains two structural regions with similar structures and functions. One of the homologous structural regions, including Edg-2, Edg-4, Edg-7, and Edg-8 proteins, binds to lysophosphatidic acid (LP A) but does not bind to sphingolipids. The second homologous structural region, including Edg-1, Edg-3, and Edg-5, binds to sphingosine-1-phosphate (SIP or SPP) but does not bind to LPA (Goetzl et a I., Ad v Exp Med Biol (1 999) 469: 259-264) 〇s IP is a potent, extracellular lysate lipid phosphate mediator that is released during, for example, platelet activation (Moser et al., J Cell Bi) 01(1 992)1 1 6 : 1 51 7-1 526). SIP can cause various reactions of cells. (Please read the notes on the back and fill out this page.) Packing and P. This paper scale applies to Chinese National Standard (CNS) A4 size (210X 297 mm) -4- 1250209 A7 B7 V. INSTRUCTIONS (2) The most notable of which is cell proliferation (Zhang et a I., J Cell B i ο I (1 9 9 1 ) 1 1 4 : 1 5 5-1 67; Bornfeldt et a I., J Cell Bi 〇 1 (1995) 130 : 1 93-206; and Berger et a I., Mol
Pharmaco 丨(1996)50 : 451-457)以及抗細胞凋亡(Cuvillier et a I. , N ature( 1 996)381 800-803; Edsall et al., J Neurosci(1 997)1 7 : 6952-6960) 〇 各種硏究結果顯示,G P C R胺基酸序列之差異性可造 成彼對天然配體或小分子促效劑或拮抗劑在親和力上之差 異。換言之,微小的序列差異可造成結合親和力及活性上Pharmaco 丨 (1996) 50: 451-457) and anti-apoptosis (Cuvillier et a I., Nature (1 996) 381 800-803; Edsall et al., J Neurosci (1 997) 167: 6952- 6960) 〇 Various studies have shown that differences in GPCR amino acid sequences can cause differences in affinity for natural ligands or small molecule agonists or antagonists. In other words, small sequence differences can cause binding affinity and activity.
之不 同。(參閱 ,例如: Meng et al .,J Bio C h e m (1996)271(50) :32016-20; B urd et a I .,J Bio C h e m (1 998)273(51 ) :34488-95; 以及 Hurley e t a I ·, J 'r—I (請先閲讀背面之注意事項再填寫本頁) 訂 經濟部智慧財產局員工消費合作社印製Different. (See, for example: Meng et al., J Bio C hem (1996) 271(50): 32016-20; B urd et a I., J Bio C hem (1 998) 273(51): 34488-95; And Hurley eta I ·, J 'r-I (please read the notes on the back and fill out this page). Printed by the Intellectual Property Office of the Ministry of Economic Affairs.
Neurochem(1999)72(1): 413-21)。特定言之,經硏究顯示 在第三個細胞內的結構區上胺基酸序列之差異可導致活性 不同。由Myburgh et al.硏究促性腺激素釋放荷爾蒙受體 之結果顯示受體之細胞內回路Ml的丙胺酸261在G蛋白 質偶合及受體攝入上非常重要(Biochem J(1 998)331 (Part 3 ) : 8 9 3 - 6)。W ο n e r o w e t a I.對促甲狀腺激素受體之硏究則 說明刪除第三個細胞內的回路,結果會造成受體之組成型 活化(J Bio Chem(1 99 8)27 3(1 4) : 790 0-5)。此報告首度提 出有關與G蛋白質耦合偶合之受體,在其第三細胞內回路 內刪除胺基酸會造成受體之組成型活化。 由於G P C R在疾病中扮演重要的角色且調控G P C R活 性後有治療疾病之能力,因此藉由鑑定及性狀化先前未知 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -5- 1250209 經濟部智慧財產局員工消費合作社印製 A7 ___B7五、發明説明(3) 的GPCR可提供新的組成物及方法來治療涉及GPCR活性 之疾病狀態。本發明係確認及性狀化新穎GPCR(GA\/E8)的 表現,並應用上述之發現,提供組成物及方法以鑑定及治 療相關的疾病。 本發明槪要 本發明係關於新近確認之與G蛋白質偶合的受體。特 定言之,本發明之與G蛋白質偶合的受體係特別表現於脾 臟及腦。進一步地其係表現於腦的白質。本文及其它資料 均暗示此新穎的受體(GAVE8)涉及各種發炎性疾病,包括 :多發性硬化症以及各種免疫系統紊亂與神經系統(尤其是 中樞神經系統)之病症。 在特色之一中,本發明係關於分離的核酸,其係選自 :編碼脊椎動物序列確認號碼:2蛋白質的胺基酸之分離的 核酸、其變型、突變及斷片,以及包含序列確認號碼:1之 核苷酸序列之分離的核酸、其變型、突變及斷片。此外, 本發明係關於結合至序列確認號碼:1之核酸雜化作用探針 及互補斷片或結合至編碼序列確認號碼:2之胺基酸序列的 核酸之雜交探針及互補斷片。此外,本發明係關於與序列 確認號碼:1具有約90%-99%相似性之核酸,包括與編碼 序列確認號碼:2之胺基酸序列具有約90%·99%相似性之 分離的核酸。在相關特色中,包含至少 8個核苷酸之寡核 苷酸及雜交的方法係包含在容許補體與核酸雜交之條件下 ,接觸互補的寡核苷酸與包含序列確認號碼:1之核苷酸的 本紙張尺度適用中國國家榇準(CNS ) Α4規格(2】0Χ 297公釐) ' -6 - (請先閱讀背面之注意事項再填寫本頁) 裝* Ρ. 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(4) 核酸步驟。此外,此互補斷片可爲在活體內及活體外進行 抑制GAVE8表現之方法中所使用之反義寡核苷酸。該方法 之步驟包含提供與序列確認號碼:1互補的寡核苷酸序列, 提供一種內含序列確認號碼:1之核苷酸序列的傳訊RNA 之人類細胞,並將此寡核苷酸引入細胞,在內細胞經由包 括抑制轉譯作用、形成三螺旋及/或活化核酸酶導致傳訊 RNA降解等機制以抑制GAVE8之表現 。 本發明亦關於分離的多胜肽,其係選自:序列確認號 碼·· 2胺基酸序列之純化的多胜肽、其變型、突變及斷片, 以及具有多肽功能性質及額外胺基酸殘基之純化的多胜肽 〇 本發明進一步的係關於操作性聯結於表現控制元件之 核酸’包括含有分離核酸的載體。本發明進一步的係關於 轉形入包含本發明核酸的培養細胞以及包含生長包含本發 明核酸之轉形細胞的步驟,以及可從細胞或培養細胞的培 養液中表現及純化多肽以產生多肽之方法。 本發明進一步的特色包括結合至本發明多肽之分離的 抗體’包括··單株及多株的抗體,在相關的特色中本發明 係進一步的揭示產生抗體之方法以及用結合至GAVE8之抗 體治療與GAVE8相關的疾病之方法。 本發明的另一特色包括測定生物的及/或組織樣品中 GAVE8是否存在(提供診斷用途)之方法^ 在本發明另一特色中,揭示調控GAVE8訊息傳遞的治 療方法’包括對須要彼的病人投用肽類、促效劑、拮抗劑 (請先閲讀背面之注意事項再填寫本頁) it 裝 P. 本紙張尺度適用中國國家標準(CNS ) A4規格(2丨0X 297公釐) 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(5) 、逆向促效劑及/或抗體。 在本發明另一特色中,揭示確認GAVE8調節劑之方法 ,其係包含提供化學部份、提供表現G A V E 8細胞之步驟並 決定化學部份是否可調控GAVE8之信號活性,包括在內生 性配體存在或不存在下決定該調控是否發生。於相關的特 色中,化學部份可包括(但非限於):肽類、抗體、促效劑、 逆向促效劑以及拮抗劑。 本發明之另一特色包括治療的組成物,該組成物包括 :核酸、抗體、多胜肽、促效劑、逆向促效劑以及拮抗劑 。本發明進一步的方法亦包括治療疾病狀態及調控GAVE8 信號活性之方法,其係對對需要彼的病人投用該治療的組 成物。 因爲GAVE8存在於血細胞及神經細胞中,因此本發明 係關於測試周邊血細胞以推斷及決定神經細胞的G A V E 8結 構及功能之方法。 本發明的種種特色將由以下之詳細描述及附圖解說。 此外’以下之各種參考文獻將更詳細的描述某些程序或組 成物。各參考文獻全文在此倂入參考文獻。 圖形簡述 圖1爲GAVE8之核酸序列(序列確認號碼:1)。 圖2爲GAVE8之胺基酸序列(序列確認號碼:2)。 圖3爲得自各種人類組織RNA之電腦化的北方墨點圖 (請先閲讀背面之注意事項再填寫本頁) b 裝 訂 本紙張尺度適用中國國家標準(CNS ) A4規格(2⑴χ297公釐) -8- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(6) 圖4爲腦部各部份表現GAVE8之電腦化的北方墨點圖 〇 圖5a爲腦部各區域之GAVE8TaqMan®表現分布圖。 圖5b爲下視丘之GAVE8TaqMan®表現分布圖。 圖6a爲周邊組織之GAVE8TaqMan®表現分布圖。 圖6b爲供周邊組織之GAVE8TaqMan®表現分布圖。 圖7描述使用表現G A V E 8之細胞(Η E K轉形株,一種 經修飾之293細胞株其係表現Gqi5蛋白質及虫螢光素酶報 導基因)經S1P(SPP)(第一組棒條,S1P濃度介於0.01-10) 以及LPA(第二組棒條,LPA濃度介於 0.26-26)刺激後測 定虫螢光素酶計讀的變化。LPA爲負控制組。 發明之詳細描述 本發明係基於發現編碼人類GAVE8之互補DNA分子 ,其爲G蛋白質偶合的受體超級類群之一員,其可結合至 內生性配體鞘胺醇-1 -磷酸鹽(SIP、SPP-1或SSP)。編碼人 類GAVE8蛋白質之核苷酸序列展示於圖1 (序列確認號碼: 1 )。GAVE8蛋白質之胺基酸序列展示於圖2(序列確認號碼 ·· 2卜 圖1之GAVE8互補DNA(序列確認號碼:1),包括未 轉譯的區域大約有2589個核苷酸長,編碼之蛋白質其分子 量大約爲41.8 kDa(不計入後轉譯的修飾)。 使用TaqMan®測定,可在月|及脾臟表現特定的傳訊 RNA斷片。此外,已知GAVE8可在周邊血細胞表現。 本紙張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) (請先閲讀背面之注意事項再填寫本頁) b 裝· 訂 -9- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(7) 此類及其它組織中存在有GAVE8代表GAVE8涉及包 含免疫功能及各種神經隨年老或器官退化而發生的疾病之 各種疾病狀態,例如:多發性硬化症。在此類組織中鑑定 GAVE8及選殖編碼GAVE8之基因,可提供各種治療方法 以調控GAVE8之表現及活性並提供治療涉及GAVE8之疾 病的治療方法。 人類的GAVE8爲具有某些Edg類群之守恆構造及功 能特色的相關分子。本文術語之"類群”當用於本發明之蛋白 質及核酸分子時,係指兩種或多種蛋白質或核酸分子,其 具有整體共同的構造結構區,並具有充分的本文定義之胺 基酸或核苷酸序列的相似性。該類群成員可爲天然的蛋白 質及核酸分子並可來自相同或不同的物種。例如該類群可 含有源自人類及源自鼠科動物蛋白質同系物的第一種蛋白 質,以及另一種源自人類的蛋白質及源自鼠科動物同系物 的第二種蛋白質。類群成員亦帶有共同的功能特性。 Hla & Maciag最先用大戟二萜醇酯類刺激人類內皮細 胞株後確認涉及細胞分化基因,分離出Edg-1受體(J Biol Chem(1 990)265 : 9308-931 3)。當時因爲找不到可活化受 體的配體所以將Edg-1歸類成孤兒GPCR。隨後Lee et al 確認在血淸中之磷脂質(被稱爲鞘胺醇-1-磷酸鹽)是Edg-1 受體的內生性配體(Science( 1 998)279 : 1 552-1 555)。 GAVE8顯著的組織分佈直接的顯示出彼在免疫系統及 神經系統上的功能。 受體亦具有守恆性,並發現於例如:人類、小鼠及大 (請先閱讀背面之注意事項再填寫本頁) -裝·Neurochem (1999) 72(1): 413-21). In particular, it has been shown that differences in amino acid sequences in the structural regions within the third cell can result in different activities. The release of gonadotropin-releasing hormone receptors by Myburgh et al. showed that the intracellular loop M1 of the receptor, alanine 261, is important for G protein coupling and receptor uptake (Biochem J (1 998) 331 (Part 3) : 8 9 3 - 6). W ο neroweta I. Studies on thyroid stimulating hormone receptors indicate that the deletion of the circuit within the third cell results in constitutive activation of the receptor (J Bio Chem (1 99 8) 27 3(1 4): 790 0-5). This report is the first to mention a receptor that is coupled to a G protein, and the deletion of an amino acid in its third intracellular loop results in constitutive activation of the receptor. Since GPCR plays an important role in disease and regulates GPCR activity and has the ability to treat diseases, it is not known by the identification and characterization of the paper. The Chinese National Standard (CNS) A4 specification (210X 297 mm) -5- 1250209 Ministry of Economic Affairs Intellectual Property Office Staff Consumer Cooperatives Print A7 ___B7 V. Inventive Note (3) GPCRs can provide new compositions and methods to treat disease states involving GPCR activity. The present invention recognizes and characterizes the performance of novel GPCRs (GA\/E8) and applies the above findings to provide compositions and methods for identifying and treating diseases associated with them. SUMMARY OF THE INVENTION The present invention relates to newly recognized receptors coupled to G proteins. Specifically, the system of the present invention coupled to the G protein is particularly expressed in the spleen and the brain. Further, it is expressed in the white matter of the brain. This and other sources suggest that this novel receptor (GAVE8) is involved in a variety of inflammatory diseases including: multiple sclerosis and various immune system disorders and disorders of the nervous system, especially the central nervous system. In one of the features, the present invention relates to an isolated nucleic acid selected from the group consisting of a nucleic acid encoding a vertebrate sequence confirmation number: 2 protein amino acid, variants, mutations and fragments thereof, and a sequence confirmation number comprising: An isolated nucleic acid of the nucleotide sequence of 1, a variant, a mutation, and a fragment. Furthermore, the present invention relates to a hybridization probe and a complementary fragment of a nucleic acid hybridization probe and a complementary fragment or a nucleic acid which binds to a sequence identification number: 2 amino acid sequence. Furthermore, the present invention relates to nucleic acids having about 90%-99% similarity to sequence confirmation number: 1, including isolated nucleic acids having about 90% 99% similarity to the amino acid sequence encoding the sequence confirmation number: 2. . In a related feature, an oligonucleotide comprising at least 8 nucleotides and a method of hybridization comprises contacting a complementary oligonucleotide with a nucleoside comprising a sequence confirmation number of 1: under conditions allowing hybridization of the complement to the nucleic acid. The paper size of the acid is applicable to China National Standard (CNS) Α4 specifications (2) 0Χ 297 mm) ' -6 - (Please read the back note and then fill out this page) Pack * Ρ. 1250209 A7 B7 Ministry of Economics The Property Bureau employee consumption cooperative printed five, the invention instructions (4) nucleic acid steps. Furthermore, the complementary fragment can be an antisense oligonucleotide used in a method of inhibiting GAVE8 expression in vivo and in vitro. The method comprises the steps of: providing an oligonucleotide sequence complementary to the sequence confirmation number: 1, providing a human cell comprising a signaling sequence comprising a nucleotide sequence of sequence number: 1 and introducing the oligonucleotide into the cell The internal cells inhibit the expression of GAVE8 via mechanisms including inhibition of translation, formation of triple helix and/or activation of nucleases resulting in degradation of the signaling RNA. The invention also relates to an isolated multi-peptide selected from the group consisting of: a purified polypeptide of the sequence confirmation number 2 amino acid sequence, a variant thereof, a mutation and a fragment, and a functional property of the polypeptide and an additional amino acid residue Purified Polypeptides of the Invention The invention further relates to nucleic acids that are operably linked to a performance control element, including vectors comprising isolated nucleic acids. Further, the present invention relates to a method of transforming into a cultured cell comprising the nucleic acid of the present invention and comprising the step of growing a transformed cell comprising the nucleic acid of the present invention, and a method of expressing and purifying the polypeptide from the culture medium of the cell or cultured cell to produce a polypeptide. . Further features of the invention include isolated antibodies 'incorporated with single and multiple strains of antibodies to the polypeptides of the invention. In a related feature, the invention further discloses methods for producing antibodies and treatment with antibodies that bind to GAVE8 A method of disease associated with GAVE8. Another feature of the invention includes a method for determining the presence or absence (providing diagnostic use) of GAVE8 in a biological and/or tissue sample. In another feature of the invention, a method of treating GAVE8 signaling is disclosed, including for a patient in need thereof Use peptides, agonists, antagonists (please read the notes on the back and fill out this page). It is installed on P. This paper scale applies to Chinese National Standard (CNS) A4 specification (2丨0X 297 mm) 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printed five, invention instructions (5), reverse agonists and / or antibodies. In another feature of the invention, a method of confirming a GAVE8 modulator is disclosed which comprises providing a chemical moiety, providing a step of expressing GAVE 8 cells and determining whether the chemical moiety can modulate GAVE8 signaling activity, including endogenous ligands The presence or absence of this determines whether this regulation occurs. Among the relevant features, chemical moieties can include, but are not limited to, peptides, antibodies, agonists, retro-activators, and antagonists. Another feature of the invention includes a therapeutic composition comprising: a nucleic acid, an antibody, a multi-peptide, an agonist, a retro-activator, and an antagonist. Further methods of the invention also include methods of treating disease states and modulating GAVE8 signaling activity, which are compositions for administering the treatment to a patient in need thereof. Since GAVE8 is present in blood cells and nerve cells, the present invention relates to methods for testing peripheral blood cells to infer and determine the G A V E 8 structure and function of nerve cells. The various features of the invention are set forth in the detailed description and the drawings. Further, certain procedures or compositions will be described in more detail in the following various references. The entire contents of each of the references are hereby incorporated by reference. BRIEF DESCRIPTION OF THE FIGURES Figure 1 shows the nucleic acid sequence of GAVE8 (sequence confirmation number: 1). Figure 2 is the amino acid sequence of GAVE8 (sequence confirmation number: 2). Figure 3 is a computerized northern ink dot map from various human tissue RNAs (please read the back note first and then fill out this page) b Binding paper scale applies to China National Standard (CNS) A4 specification (2(1)χ297 mm) - 8- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 5, Invention Description (6) Figure 4 shows the computerized northern ink dot map of each part of the brain showing GAVE8. Figure 5a shows the GAVE8TaqMan in various regions of the brain. ® Performance Profile. Figure 5b is a GAVE8TaqMan® performance profile for the lower view. Figure 6a is a GAVE8TaqMan® performance profile for surrounding tissue. Figure 6b is a GAVE8TaqMan® performance profile for surrounding tissue. Figure 7 depicts the use of cells expressing GAVE 8 (Η EK transformant, a modified 293 cell line expressing Gqi5 protein and luciferase reporter gene) via S1P (SPP) (first set of bars, S1P) Changes in luciferase reading were determined after stimulation at concentrations ranging from 0.01 to 10) and LPA (second group of bars, LPA concentrations between 0.26 and 26-26). LPA is the negative control group. DETAILED DESCRIPTION OF THE INVENTION The present invention is based on the discovery of a complementary DNA molecule encoding human GAVE8, a member of the G protein-coupled receptor supergroup, which binds to the endogenous ligand sphingosine-1 -phosphate (SIP, SPP -1 or SSP). The nucleotide sequence encoding the human GAVE8 protein is shown in Figure 1 (sequence confirmation number: 1). The amino acid sequence of the GAVE8 protein is shown in Figure 2 (SEQ ID NO: 2) GAVE8 complementary DNA of Figure 1 (sequence confirmation number: 1), including untranslated regions of approximately 2589 nucleotides in length, encoding the protein Its molecular weight is approximately 41.8 kDa (not included in the post-translational modification). Using TaqMan® assay, specific subscript RNA fragments can be expressed in the month and spleen. In addition, GAVE8 is known to be expressed in peripheral blood cells. National Standard (CNS) A4 Specification (210X297 mm) (Please read the note on the back and fill out this page) b Installation · Order -9- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 5, Invention Description ( 7) GAVE8 is present in this and other tissues. GAVE8 is involved in various disease states including immune function and diseases in which various nerves occur with age or organ degeneration, such as multiple sclerosis. GAVE8 is identified in such tissues. The selection of the gene encoding GAVE8 provides various treatments to regulate the performance and activity of GAVE8 and to provide a treatment for diseases involving GAVE8. Human GAVE8 A related molecule having a conserved structure and functional characteristics of certain Edg groups. The term "group" as used herein refers to two or more proteins or nucleic acid molecules which are collectively common when used in the proteins and nucleic acid molecules of the present invention. Constructing structural regions and having sufficient similarity to the amino acid or nucleotide sequences defined herein. Members of this group may be native proteins and nucleic acid molecules and may be derived from the same or different species. For example, such a group may contain Humans and the first protein derived from murine protein homologs, and another human-derived protein and a second protein derived from murine homologs. Group members also share common functional properties. Hla & Maciag was the first to stimulate human endothelial cell lines with sterol esters and confirmed the genes involved in cell differentiation, and isolated the Edg-1 receptor (J Biol Chem (1 990) 265: 9308-931 3). Less than the ligand of the activatable receptor, Edg-1 was classified as an orphan GPCR. Subsequently Lee et al confirmed that the phospholipid (called sphingosine-1-phosphate) in blood sputum is Edg- 1 Endogenous ligand of the receptor (Science (1 998) 279: 1 552-1 555). The remarkable tissue distribution of GAVE8 directly shows its function in the immune system and nervous system. The receptor is also conserved. And found in, for example, humans, mice and large (please read the notes on the back and fill out this page) -
、1T Ρ 本纸張尺度適用中國國家標準(CNS ) Α4規格(210X297公釐) -10- 1250209 A7 B7 經濟部智慧財產局員工涓費合作社印製 五、發明説明(8) 白鼠。某些結構區在種系間亦具有守恆性。 GAVE8亦可調控相關細胞凋亡的表現。因此,GAVE8 可誘發或去除程序化的細胞死亡。 具體實施例之一中,G A V E 8蛋白質包括一個第三細胞 內的環形結構區,約從胺基酸214至約252,與序列確認 號碼:2之第三細胞內的環形結構區至少有約65 %,較佳 者少有約75%,及更佳者約85%、95%或98%的胺基酸序 列相似性。 本文術語之”相當的胺基酸殘基11係指當兩種或多種序列 經調準分析後蛋白質序列內實質上佔有相同位置之胺基酸 。本發明較佳的GAVE8多胜肽的胺基酸序列與序列確認號 碼:2中第三細胞內的環形結構區之一致胺基酸序列有充分 的相似性。本文術語之”充分的相似性”意指第一個胺基酸 或核苷酸序列與第二個胺基酸或核苷酸序列含有充分的或 最小數目之相同或相當(例如相似的側鏈)之胺基酸殘基或核 苷酸,因此使第一及第二胺基酸或核苷酸序列具有共同構 造的結構區及/或共同的功能活性。例如,本文定義之充分 相似性的胺基酸或核苷酸序列’其共同的構造結構區含有 約65%之相似性,較佳者75%之相似性,更佳者85%、 95。/。或98%之相似性。 其它重要的結構區包括(但非限於):橫越細胞膜(TM)之 結構區(於序列確認號碼:2中,TM 1約從胺基酸殘基3 8 至約62 ; TM2約從胺基酸殘基70至約95 ; TM3約從胺基 酸殘基112至約131 ; TIVI4約從胺基酸殘基151至約176 (請先閱讀背面之注意事項再填寫本頁) •裝· 、*?口 本纸張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) -11 - 1250209 A7 B7 五、發明説明(9) ;T Μ 5約從胺基酸殘基1 9 3至約2 1 3 ; T Μ 6約從2 53至約 273 ;而ΤΜ7約從胺基酸殘基290至約310);細胞質(細胞 內的環形)結構區(於序列確認號碼:2中,約從胺基酸殘基 63至約69 ;約從胺基酸殘基1 32至約1 50 ;約從胺基酸殘 基214至約252 ;以及約從胺基酸殘基31 1至約398);以 及細胞外的結構區(於序列確認號碼:2中,約從胺基酸殘 基1至約37 ;約從胺基酸殘基96至約1 1 1 ;約從胺基酸 177至約192 ;以及約從胺基酸殘基274至約290)。在相 關的特色中,重要的結構區亦包括(但非限於)一致的糖基化 作用位點、脂質結合部位及磷酸化作用位點。 本文中"GAVE8活性"、"GAVE8的生物活性"或"GAVE8 功能的活性”可互通,意指依據標準技藝在活體內或活體外 測定之GAVE8蛋白質、多肽或核酸分子在GAVE8反應細 胞中展現的活性。GAVE8活性可爲直接活性,例如可聯結 或活化第二個蛋白質,或間接的活性,例如爲經G A V Ε 8蛋 白質與第二個蛋白質交互作用調節的細胞信號活性。在較 佳的具體實施例中,GAVE8的活性包括至少一個或多個下 列之活性:(i)能與GAVE8信號路徑之蛋白質交互作用; (ii)能與GAVE8配體交互作用;以及(Mi)能與細胞內的目標 蛋白質交互作用。例如,GAVE8之活性包括(但並非限制於 )··結合鞘胺醇-1 -憐酸鹽(S -1 - P ),其可藉由例如螢光之改 變(FUPR®分析)測定,或其在以包含序列確認號碼:1之 表現載體轉形的細胞中與標記的S-1 -P之結合而測定。 因此’本發明特色之另一具體實施例爲具有GAVE 8活 本纸張尺度適用中.國國家標準(CNS ) A4規格(210X297公釐) (請先閲讀背面之注意事項再填寫本頁) 裝_ 經濟部智慧財產局員工消費合作社印製 -12- 1250209 A7 B7 五、發明説明(^ 性之分離的GAVE8蛋白質及其多胜肽。 本發明之各種特色將於以下次章節進一步的詳述。 I.分離的核酸分子 本發明特色之一係關於編碼GAVE8蛋白質或其生物活 性部份之分離的核酸分子;以及足以作爲雜交探針確認編 碼GAVE8核酸(例如GAVE8傳訊RNA)的核酸分子,以及 可作爲 PCR引子放大或突變GAVE8核酸分子之斷片。本 文術語之"核酸分子"包括DNA分子(例如互補DNA或基因 體DNA)以及RNA分子(例如傳訊RNA)以及使用核苷酸類 似物產生的DNA或RNA類似物。核酸分子可爲單股或雙 股分子。 "分離”的核酸分子係分離自其它天然核酸分子之核酸。 較佳者,π分離"的核酸不含生物體天然基因體DNA序列(較 佳者爲編碼蛋白質之序列)鄰接的核酸(即位於核酸5’及3’ 端之序列)。例如於各種具體實施例之中,分離的GAVE8 核酸分子可含有少於約5仟驗基、4仟驗基、3仟驗基、2 仟鹼基、1仟鹼基、0.5仟鹼基或0.1仟鹼基之天然基因體 DNA核酸分子鄰接的核苷酸序列。此外,”分離”的核酸分 子,例如重組技藝製作之互補DNA分子,可實質上不含其 他細胞內的物質,或培養液當,或化學合成的分子可實質 上不含化學的前驅物或其它化學藥品。 本發明之核酸分子’例如具有序列確認號碼:1之核苷 酸序列的核酸分子,或那些核苷酸序列之任何補體,可使 本纸張尺度適用中國國家標準(CNS ) Α4規格(2】0X 297公釐) (請先閲讀背面之注意事項再填寫本頁) -装· 訂 經濟部智慧財產局員工消費合作社印製 -13- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(U 用標準分子生物學技藝以及本文提供之序列資料加以分離 。可使用序列確認號碼:1之所有或部分之核酸序列作爲雜 交探針,使用標準雜交以及選殖技藝分離GAVE8核酸分子 (例如,f苗述於 Sambrook et al., eds., "Molecular Cloning :A Laboratory Manual," 2nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1989)。 本發明之核酸分子可使用互補DNA、傳訊RNA或基因 體DNA作爲模版以適當的寡核苷酸引子,依據標準PCR 放大技藝放大。例如,該引子可包含(但非限於)5’-CCATGGAGTCGGGGCTGC-3’(序歹!J 確認號碼:3)以及 5·-TCAGTCTGCAGCCGGTTC-3·(序歹U確認號碼A)。放大的核 酸可選殖入適當的載體並經DNA序列分析特徵化。此外, 對應至GAVE8核苷酸序列之寡核苷酸可用標準的合成技藝 製備,例如使用自動化的DNA合成儀。 另一較佳的具體實施例中,本發明之分離的核酸分子 包含與序列確認號碼:1之核苷酸序列互補之核酸分子、或 其部分。互補於給定之核苷酸序列的核酸分子可充分的與 給定之核苷酸序列互補,與給定之核苷酸序列雜交後可形 成穩定的雙股互補體。 此外,本發明之核酸分子可僅包含編碼GAVE8之核酸 序列部分,例如可作爲探針或引子之斷片,或編碼GAVE8 之生物活性部分的斷片。例如,該斷片可包含(但並非限 制於)編碼序列確認號碼:2中胺基酸殘基1 -398的區域。 從選殖的人類GAVE8基因中測定核苷酸序列可產生並設計 '裝-- (請先閱讀背面之注意事項再填寫本頁) 本紙張尺度適用中國國家標準(CNS ) A4規格(210X29*7公釐) •14- 1250209 A7 B7 五、發明説明(d 探針及引子,應用於確認及/或選殖其他細胞類型(例如其它 組織)以及其它哺乳動物之GAVE8同系物。探針/引子通常 包含相當純的寡核苷酸。寡核苷酸包含通常在迫切條件下 至少雜交成約1 2,較佳者約2 5,更佳者約5 0、7 5、1 0 〇、 125、150、175、200、250、300、350 或 400 個連續不斷 的與序列確認號碼:1同股或反股之核苷酸序列區域或序列 確認號碼:1之天然突變。基於人類G A V E 8核苷酸序列之 探針可用以偵測轉錄產物或編碼相似的或相同蛋白質的基 因序列。探針可包含附著於其上之標記基團,例如:放射 性同位素、螢光化合物、酵素或酵素輔助因子。該探針可 作爲確認細胞或組織中不適當的表現GAVE8蛋白質之診斷 檢驗組套的一部分,例如從患者之細胞樣品中測量編碼 GAVE8核酸之含量,例如偵測GAVE8傳訊RNA之含量或 決定GAVE8的基因是否已突變或刪除。 編碼"GAVE8之生物活性部分"的核酸斷片,其製備方 法係分離編碼具有GAVE8之生物活性之多肽部分的序列確 認號碼:1,表現GAVE8蛋白質編碼之部分(例如在活體外 進行重組表現)並評估GAVE8編碼部分之活性。例如編碼 GAVE8生物活性部分的核酸斷片可包括第三細胞內的環形 結構區,例如在序列確認號碼:2中之胺基酸殘基從約2 1 4 至約2 52。本發明進一步的包含由於遺傳密碼退化現象所 造成之不同於序列確認號碼·· 1之核苷酸序列,但與序列確 認號碼:1之核苷酸序列編碼相同GAVE8蛋白質的核酸分 子。 本紙張尺度適用中國國家榡準(CNS ) A4規格(210X297公釐) (請先閲讀背面之注意事項再填寫本頁) *裝· 訂 經濟部智慧財產局員工消費合作社印製 -15- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(j 除了序列確認號碼:1之人類G Av E 8核苷酸序列之外 ,熟悉此技藝的專業人士將認知在族群(例如人類族群)中 DNA序列之多型現象可導致GAVE8胺基酸序列之改變。該 GAVE8基因之遺傳多型性可由於天然的對偶基因的變異而 存在於族群之個體中。對偶基因是給定基因的基因座的另 一個基因。本文術語之n基因”以及"重組型基因"意指包含編 碼GAVE8蛋白質(較佳者爲哺乳動物的GAVE8蛋白質)之 開放編閱架構的核酸分子。本文之”對偶基因的變型"意指發 生在GAVE8基因座或核苷酸序列編碼之多肽的核苷酸序列 。另一對偶基因可經對許多不同個體之重要的基因定序而 加以確認。其可在個別個體使用雜交探針輕易的確認相同 之基因的基因座。在GAVE8中任何以及所有之該核苷酸變 異以及產生的胺基酸多型現象或變異,造成天然的對偶基 因變異的結果並不改變GAVE8的功能活性均屬於本發明之 範圍。 此外,其它物種編碼GAVE8蛋白質核酸分子(GAVE8 同系物),其核苷酸序列不同於人類G A V E 8,亦均屬於本發 明之範圍。利用本文揭示之人類G A V E 8核酸的特性,使用 人類互補D N A (或其部分)作爲雜交探針,依據標準雜交技 藝在迫切的雜交條件下可分離對應至本發明天然對偶基因 的變型及GAVE8互補DNA同系物的核酸分子。 據此,另一具體實施例中,本發明的分離核酸分子長 度至少爲 300、325、350、375' 400、425、450、500、 550、600、650、700、800、900、1000 或 1100 個核苷酸 本紙張尺度適用中國國家標準(CNS) A4規格(210X 297公釐) " ' -16- (請先閲讀背面之注意事項再填寫本頁) -裝 Ρ. 1250209 ΑΊ B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(^ ’並在迫切的條件下可與包含核苷酸序列,較佳者爲編碼 序列確認號碼:1之序列,或其互補序列之核酸分子雜交。 本文術語之”在迫切的條件下"是指至少60%(65%、 70%、較佳者75%或75%以上)相同之核苷酸序列在淸洗之 下仍相互保持雜交之條件。該迫切的條件爲熟知此技藝之 專家所熟知且可參見"Current Protocols in Molecular Biology)" John Wiley & Sons, N. Y.(1 989), 6.3.1 -6.3.6。 迫切的雜交條件的較佳非限制實施例是在6X氯化鈉/檸檬 酸鈉(SSC)、約45°c下雜交,接著用0.2X SSC、0.1 %SDS 在50-65°C下淸洗一次或多次。較佳者,本發明之分離的核 酸分子可在迫切的條件下與序列確認號碼:1之序列或相當 於其補體之天然發生的核酸分子雜交。本文之”天然發生的π 核酸分子意指其具有天然核苷酸序列之RNA或DNA分子( 例如編碼天然的蛋白質)。 族群中除了天然發生的GAVE8序列對偶基因的變型之 外,熟悉此技藝之專業人士將進一步的認知在序列確認號 碼:1之核苷酸序列上製作突變,可改變編碼GAVE8蛋白 質之胺基酸序列,而不改變GAVE8蛋白質的生物活性。例 如可在”非必要的"胺基酸殘基上進行核苷酸取代造成胺基酸 之取代。”非必要的"胺基酸殘基係指可從野生型GAVE 8序 歹U (例如序列確認號碼:2之序列)改變而不改變生活性物的 殘基,而"必須的"胺基酸殘基是生物活性須要的殘基。例如 ,在G A V E8之中各不守恆或僅半守恆的胺基酸殘基是在活 性上非必須的殘基,其可爲上述改變之目標殘基。此外, 本紙張尺度適用中國國家標準(CNS ) A4規格(2丨0X 297公釐) (請先閲讀背面之注意事項再填寫本頁) •裝· 訂 P. -17- 1250209 Α7 Β7 經濟部智慧財產局員工消費合作社印髮 五、發明説明(d 在GAVE8蛋白質之中各守恆之胺基酸殘基可爲活性上所須 要的殘基,所以將不是改變之目標物。 據此,本發明之另一特色係關於含有改變在活性上非 必須的殘基之編碼GAVE8蛋白質之核酸分子。該GAVE8 蛋白質與序列確認號碼:2之胺基酸序列不同但仍保留生物 的活性。在具體實施例之一中,分離的核酸分子包括至少 與編碼序列確認號碼:2之蛋白質的胺基酸序列約有87 % 相同、90%、93%、95%、98%或99%相同之核苷酸序列。 在序列確認號碼:1中引入一個或多個核苷酸進行取代 、加入或刪除可在編碼之蛋白質中取代、加入或刪除一個 或多個胺基酸,創造出與序列確認號碼:2不同之編碼 GAVE8蛋白質之分離的核酸分子。 可由標準技藝製作突變,例如:定點突變及經P C R調 節的誘變。較佳者,可在一個或多個預測之非必需胺基酸 殘基上進行保留性胺基酸取代。”保留性胺基酸取代”是用具 有相似側鏈的胺基酸殘基進行胺基酸殘基之取代。具有相 似側鏈的胺基酸殘基類群已定義於此技藝中。該類群包括 鹼性側鏈的胺基酸(例如:離胺酸、精胺酸、組織胺酸)、酸 性側鏈的胺基酸(例如:天門冬胺酸、麩胺酸)、未帶電價的 極性側鏈胺基酸(例如:甘胺酸、天門冬醯胺酸、麩胺醯胺 酸、絲胺酸、蘇胺酸、酪胺酸、半胱胺酸)、非極性側鏈胺 基酸(例如:丙胺酸、纈胺酸、白胺酸、異白胺酸、腩胺酸 、苯丙胺酸、甲硫胺酸、色胺酸)、β ·分支側鏈的胺基酸(例 如:蘇胺酸、纈胺酸、異白胺酸)及芳香族側鏈胺基酸(例如 本紙張尺度適用中國國家標準(CNS ) Α4規格(2)0X297公釐) ~ ' •18- (請先閱讀背面之注意事項再填寫本頁) 1250209 A7 B7 五、發明説明(β (請先閲讀背面之注意事項再填寫本頁) ••酪胺酸、苯丙胺酸、色胺酸、組織胺酸)。因此’較佳者 是在GAVE8預測之非必需胺基酸殘基位置上用相同側鏈類 群之另一胺基酸殘基取代。此外,可沿GAVE8編碼序列之 全部或部分隨機地引入突變,例如經飽和誘變法,產生之 突變體可經GAVE8的生物活性篩選後確認仍保留活性之突 變體。誘變後,可重組表現編碼之蛋白質並可測定蛋白質 之活性。 較佳的具體實施例之一中,可測定突變GAVE8蛋白質 :(1 )與GAVE8信號路徑之蛋白質形成蛋白質:蛋白質間 交互作用之能力;(2)結合GAVE8配體(例如SIP)之能力; 或(3)結合細胞內目標蛋白質的能力。在另一較佳的具體實 施例中,可測定突變GAVE8調控細胞增殖或細胞分化的能 力。 經濟部智慧財產局員工消費合作社印製 本發明包含反股核酸分子,即與編碼蛋白質之正股互 補的核酸分子,例如互補至雙股互補D NA分子的密碼股或 互補至傳訊RNA序列。據此,反股核酸可經氫鍵與正股核 酸鍵結。反股核酸可互補至全部的GAVE8密碼股,或僅互 補至其部分,例如全部或部分之蛋白質編碼區(或開放編閱 架構)。反股核酸分子可爲編碼GAVE8之密碼股的非編碼 區之反股核苷酸序列。非編碼區(”5·及3,未轉譯的或側翼區 Ί是鄰接編碼區及非轉譯成胺基酸之5·及3,序列。 給定編碼GAVE8之密碼股序列(例如序列確認號碼:, 1T Ρ This paper scale applies to China National Standard (CNS) Α 4 specifications (210X297 mm) -10- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau staff levy cooperatives printed five, invention description (8) white rat. Certain structural areas are also conserved across germ lines. GAVE8 also regulates the expression of related apoptosis. Therefore, GAVE8 can induce or remove programmed cell death. In one embodiment, the GAVE 8 protein comprises a circular structural region within a third cell, from about amino acid 214 to about 252, and at least about 65 of the circular structural region within the third cell of sequence confirmation number: %, preferably less than about 75%, and more preferably about 85%, 95% or 98% amino acid sequence similarity. The term "equivalent amino acid residue 11" as used herein refers to an amino acid that substantially occupies the same position within a protein sequence when two or more sequences have been subjected to the alignment assay. Preferred amine groups of the GAVE8 polypeptide of the present invention The acid sequence is sufficiently similar to the consensus amino acid sequence of the circular structural region in the third cell in the sequence confirmation number: 2. The "sufficient similarity" of the term means the first amino acid or nucleotide. The sequence and the second amino acid or nucleotide sequence contain a sufficient or minimum number of amino acid residues or nucleotides of the same or equivalent (eg, similar side chains), thereby allowing the first and second amine groups The acid or nucleotide sequence has a commonly constructed structural region and/or a common functional activity. For example, a sufficiently similar amino acid or nucleotide sequence as defined herein has a common structural region containing about 65% similarity. Sexuality, preferably 75% similarity, better 85%, 95% or 98% similarity. Other important structural regions include (but are not limited to): the structural region across the cell membrane (TM) ( In sequence confirmation number: 2, TM 1 is approximately from amino acid From about 3 to about 62; TM2 is from about 70 to about 95 amino acid residues; TM3 is from about 112 amino acid residues to about 131; TIVI4 is from about 151 to about 176 amino acid residues (please read the back) Note: Please fill out this page again) • Install the paper size for the Chinese version (CNS) A4 size (210X297 mm) -11 - 1250209 A7 B7 V. Invention description (9) ; T Μ 5 About from amino acid residue 1 9 3 to about 2 1 3 ; T Μ 6 from about 2 53 to about 273; and ΤΜ7 from about amino acid residue 290 to about 310); cytoplasmic (intracellular ring) structure The region (in sequence confirmation number: 2, from about amino acid residue 63 to about 69; from about amino acid residue 1 32 to about 1 50; from about amino acid residue 214 to about 252; From amino acid residue 31 1 to about 398); and extracellular structural regions (in sequence number: 2, from about 1 to about 37 amino acid residues; from about 96 amino acid residues to about amino acid residues) 1 1 1 ; about from amino acid 177 to about 192; and about from amino acid residue 274 to about 290). Among related features, important structural regions also include, but are not limited to, consistent glycosylation. Site of action, lipid binding site and Acidification site. In this article, "GAVE8 activity", "GAVE8 biological activity" or "GAVE8 functional activity" is interoperable, meaning GAVE8 protein, polypeptide measured in vivo or in vitro according to standard techniques Or the activity exhibited by the nucleic acid molecule in GAVE8-reactive cells. The GAVE8 activity can be direct activity, e.g., can bind or activate a second protein, or indirect activity, e.g., cellular signaling activity mediated by interaction of a G A V Ε 8 protein with a second protein. In a preferred embodiment, the activity of GAVE8 comprises at least one or more of the following activities: (i) interaction with a protein of the GAVE8 signaling pathway; (ii) interaction with a GAVE8 ligand; and (Mi) It can interact with target proteins in cells. For example, the activity of GAVE8 includes, but is not limited to, binding to sphingosine-1 - p-acid salt (S-1 - P), which can be determined, for example, by a change in fluorescence (FUPR® analysis), or It was determined by binding to the labeled S-1 -P in cells transformed with the expression vector containing the sequence confirmation number: 1. Therefore, another specific embodiment of the present invention is a GAVE 8 paper size applicable to the National Standard (CNS) A4 specification (210X297 mm) (please read the back note first and then fill out this page) _ Ministry of Economic Affairs Intellectual Property Bureau Employees Consumption Cooperative Printed -12-1250209 A7 B7 V. INSTRUCTION DESCRIPTION (Gorg8 protein and its multi-peptide) isolated. The various features of the present invention will be further detailed in the following sections. I. Isolated Nucleic Acid Molecules One of the features of the invention relates to an isolated nucleic acid molecule encoding a GAVE8 protein or a biologically active portion thereof; and a nucleic acid molecule sufficient to recognize a GAVE8 nucleic acid (eg, GAVE8 signaling RNA) as a hybridization probe, and Amplification or mutation of a fragment of a GAVE8 nucleic acid molecule as a PCR primer. The term "nucleic acid molecule" includes DNA molecules (such as complementary DNA or genomic DNA) and RNA molecules (such as signaling RNA) and the use of nucleotide analogs. DNA or RNA analogs. Nucleic acid molecules can be single or double stranded molecules. "Isolated" nucleic acid molecules are isolated from other natural nucleic acid molecules. Preferably, the π-isolated nucleic acid does not contain a nucleic acid adjacent to the organism's native gene DNA sequence (preferably a protein-encoding sequence) (ie, a sequence located at the 5' and 3' ends of the nucleic acid). In various embodiments, an isolated GAVE8 nucleic acid molecule can contain less than about 5 仟 test, 4 仟 test, 3 仟 test, 2 仟 base, 1 仟 base, 0.5 仟 base, or 0.1 仟 base. a nucleotide sequence adjacent to a natural genomic DNA nucleic acid molecule. Further, an "isolated" nucleic acid molecule, such as a complementary DNA molecule made by recombinant techniques, may be substantially free of other intracellular substances, or culture fluids, or The chemically synthesized molecule may be substantially free of chemical precursors or other chemicals. The nucleic acid molecule of the invention 'for example, a nucleic acid molecule having a nucleotide sequence of sequence number: 1, or any complement of those nucleotide sequences, This paper scale can be applied to China National Standard (CNS) Α4 specifications (2) 0X 297 mm) (please read the notes on the back and fill out this page) - Installed and subscribed to the Ministry of Economic Affairs, Intellectual Property Bureau, employee consumption cooperatives -13- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Employees Consumption Cooperatives Printed V. Description of the invention (U is separated by standard molecular biology techniques and sequence data provided herein. Sequence identification number: 1 or all of the nucleic acids can be used. Sequences are used as hybridization probes to isolate GAVE8 nucleic acid molecules using standard hybridization and selection techniques (eg, f-miao described in Sambrook et al., eds., " Molecular Cloning: A Laboratory Manual, " 2nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1989). The nucleic acid molecules of the present invention can be amplified using standard DNA amplification techniques using complementary DNA, signaling RNA or genetic DNA as a template with appropriate oligonucleotide primers. For example, the primer may include, but is not limited to, 5'-CCATGGAGTCGGGGCTGC-3' (sequence 歹!J confirmation number: 3) and 5·-TCAGTCTGCAGCCGGTTC-3 (sequence 歹U confirmation number A). The amplified nucleic acid can be optionally ligated into an appropriate vector and characterized by DNA sequence analysis. Furthermore, oligonucleotides corresponding to the GAVE8 nucleotide sequence can be prepared using standard synthetic techniques, for example using an automated DNA synthesizer. In another preferred embodiment, the isolated nucleic acid molecule of the present invention comprises a nucleic acid molecule complementary to the nucleotide sequence of Sequence Number: 1 or a portion thereof. A nucleic acid molecule complementary to a given nucleotide sequence is sufficiently complementary to a given nucleotide sequence to hybridize to a given nucleotide sequence to form a stable double-stranded complement. Furthermore, the nucleic acid molecule of the present invention may comprise only a portion of the nucleic acid sequence encoding GAVE8, such as a fragment which may serve as a probe or primer, or a fragment encoding a biologically active portion of GAVE8. For example, the fragment may comprise, but is not limited to, a region of the amino acid residue 1 - 398 in the coding sequence confirmation number: 2. The nucleotide sequence can be generated and designed from the selected human GAVE8 gene. (Please read the back note and fill out this page.) This paper size applies to the Chinese National Standard (CNS) A4 specification (210X29*7). • 14- 1250209 A7 B7 V. INSTRUCTIONS (d probes and primers for the identification and/or selection of other cell types (eg other tissues) and other mammalian GAVE8 homologs. Probes/introductions usually A relatively pure oligonucleotide is included. The oligonucleotide comprises at least hybridization to about 12 in an urgent condition, preferably about 25, more preferably about 50, 75, 10, 125, 150, 175, 200, 250, 300, 350 or 400 consecutive sequence confirmation numbers: 1 nucleotide sequence of the same strand or counter-strand or sequence confirmation number: 1 natural mutation. Based on human GAVE 8 nucleotide sequence The probe can be used to detect a transcription product or a gene sequence encoding a similar or identical protein. The probe can comprise a labeling group attached thereto, such as a radioisotope, a fluorescent compound, an enzyme or an enzyme cofactor. Needle As part of a diagnostic test set that identifies inappropriate GAVE8 proteins in cells or tissues, for example, measuring the amount of GAVE8 nucleic acid encoded in a cell sample from a patient, such as detecting the amount of GAVE8 signaling RNA or determining whether the GAVE8 gene has been mutated Or deletion. A nucleic acid fragment encoding the "biologically active portion" of GAVE8, which is prepared by isolating a sequence confirmation number encoding a portion of the polypeptide having the biological activity of GAVE8: 1, representing a portion encoded by the GAVE8 protein (e.g., in vitro) Recombinant performance) and assessment of the activity of the GAVE8 coding portion. For example, a nucleic acid fragment encoding a biologically active portion of GAVE8 can comprise a circular structural region within a third cell, such as an amino acid residue at sequence confirmation number: 2 from about 2 1 4 Up to about 2 52. The present invention further comprises a nucleic acid sequence which differs from the sequence confirmation number of the nucleotide sequence due to degradation of the genetic code, but which encodes the same GAVE8 protein as the nucleotide sequence of the sequence confirmation number: Molecular. This paper scale applies to China National Standard (CNS) A4 specification (210X297 mm) (Please read the note on the back and fill out this page) *Installation · Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing -15- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention description (j In addition to the human G Av E 8 nucleotide sequence of sequence confirmation number: 1, those skilled in the art will recognize that polymorphisms in the DNA sequence in a population (e.g., a human population) can result in changes in the GAVE8 amino acid sequence. The genetic polymorphism of the GAVE8 gene can occur in individuals of the ethnic group due to variations in the natural dual gene. A dual gene is another gene at the locus of a given gene. The term "n gene" and "recombinant gene" as used herein mean a nucleic acid molecule comprising an open-reading architecture encoding a GAVE8 protein, preferably a mammalian GAVE8 protein. "The variant of a dual gene" Refers to the nucleotide sequence of a polypeptide that occurs at the GAVE8 locus or nucleotide sequence. Another dual gene can be confirmed by sequencing the genes important to many different individuals. It can easily confirm the locus of the same gene in individual individuals using hybridization probes. Any and all of this nucleotide variation in GAVE8 and the resulting amino acid polymorphism or variation, resulting in a natural dual gene mutation that does not alter the functional activity of GAVE8, is within the scope of the invention. Furthermore, other species encoding a GAVE8 protein nucleic acid molecule (GAVE8 homolog) having a nucleotide sequence different from human G A V E 8, are also within the scope of the invention. Using the characteristics of the human GAVE 8 nucleic acid disclosed herein, using human complementary DNA (or a portion thereof) as a hybridization probe, the variant corresponding to the natural dual gene of the present invention and the GAVE8 complementary DNA can be isolated under stringent hybridization conditions according to standard hybridization techniques. A nucleic acid molecule of a homologue. Accordingly, in another embodiment, the isolated nucleic acid molecule of the invention has a length of at least 300, 325, 350, 375' 400, 425, 450, 500, 550, 600, 650, 700, 800, 900, 1000 or 1100. The nucleotide size of this paper is applicable to the Chinese National Standard (CNS) A4 specification (210X 297 mm) " ' -16- (Please read the note on the back and fill out this page) - Decoration. 1250209 ΑΊ B7 Ministry of Economic Affairs The Intellectual Property Office employee consumption cooperative printed five, the invention description (^ ' and under urgent conditions can be hybridized with a nucleic acid molecule comprising a nucleotide sequence, preferably a sequence of the coding sequence confirmation number: 1, or its complementary sequence The term "under urgent conditions" as used herein means that at least 60% (65%, 70%, preferably 75% or more) of the same nucleotide sequences remain hybridized to each other under rinsing. Conditions. This urgent condition is well known to those skilled in the art and can be found in "Current Protocols in Molecular Biology"" John Wiley & Sons, NY (1 989), 6.3.1 -6.3.6. Urgent hybridization A preferred non-limiting example of the conditions is in 6X sodium chloride / Sodium citrate (SSC), hybridization at about 45 ° C, followed by one or more washes with 0.2X SSC, 0.1% SDS at 50-65 ° C. Preferably, the isolated nucleic acid molecule of the invention can be Under stringent conditions, it hybridizes to a sequence of sequence confirmation number: 1 or a naturally occurring nucleic acid molecule corresponding to its complement. The "naturally occurring π nucleic acid molecule" herein refers to an RNA or DNA molecule having a native nucleotide sequence (eg Encoding natural proteins). In addition to the naturally occurring variant of the GAVE8 sequence dual gene in the population, those skilled in the art will further recognize that mutations can be made in the nucleotide sequence of sequence confirmation number: 1, which can alter the amino acid sequence encoding the GAVE8 protein. Without altering the biological activity of the GAVE8 protein. For example, a nucleotide substitution on an "non-essential" amino acid residue results in the substitution of an amino acid. "Non-essential " amino acid residues refer to the wild type GAVE 8 sequence 歹U ( For example, the sequence confirmation number: the sequence of 2) changes without changing the residue of the living property, and the "must" amino acid residue is the residue required for biological activity. For example, each of the non-conserved or only semi-conserved amino acid residues in G A V E8 is a non-essential residue which may be the target residue of the above alteration. In addition, the paper size applies to the Chinese National Standard (CNS) A4 specification (2丨0X 297 mm) (please read the notes on the back and fill out this page) • Install P. -17- 1250209 Α7 Β7 Ministry of Economics The property bureau employee consumption cooperative issued 5, the invention description (d in the GAVE8 protein, each of the conserved amino acid residues may be the residue required for the activity, so it will not be the target of the change. Accordingly, the present invention Another feature relates to a nucleic acid molecule encoding a GAVE8 protein that contains residues that alter the activity that are not essential. The GAVE8 protein differs from the amino acid sequence of sequence number: 2 but retains the activity of the organism. In one embodiment, the isolated nucleic acid molecule comprises at least 87% identical, 90%, 93%, 95%, 98% or 99% identical nucleotide sequence to the amino acid sequence encoding the protein of sequence number:2. Introducing one or more nucleotides in sequence confirmation number: 1 for substitution, addition or deletion to replace, add or delete one or more amino acids in the encoded protein to create a sequence confirmation number 2 different isolated nucleic acid molecules encoding GAVE8 proteins. Mutations can be made by standard techniques, such as site-directed mutagenesis and PCR-mediated mutagenesis. Preferably, one or more predicted non-essential amino acid residues can be used. A retentive amino acid substitution is made. "Reserved amino acid substitution" is the substitution of an amino acid residue with an amino acid residue having a similar side chain. A group of amino acid residues having similar side chains has been defined. In this art, the group includes amino acids of a basic side chain (eg, aminic acid, arginine, histidine), amino acids of an acidic side chain (eg, aspartic acid, glutamic acid) ), uncharged polar side chain amino acids (eg, glycine, aspartic acid, glutamine proline, serine, threonine, tyrosine, cysteine), non Polar side chain amino acids (eg, alanine, valine, leucine, isoleucine, valine, phenylalanine, methionine, tryptophan), amine groups of the β-branched side chain Acids (eg, sulphate, valine, isoleucine) and aromatic side chain amino acids ( For example, this paper scale applies Chinese National Standard (CNS) Α4 Specifications (2) 0X297 mm) ~ ' •18- (Please read the back note first and then fill out this page) 1250209 A7 B7 V. Invention Description (β Read the precautions on the back and fill out this page. •• tyrosine, phenylalanine, tryptophan, histidine. Therefore, the better one is the same side of the non-essential amino acid residue predicted by GAVE8. Another amino acid residue of the chain group is substituted. In addition, mutations can be introduced randomly along all or part of the GAVE8 coding sequence, for example, by saturation mutagenesis, the resulting mutant can be confirmed by GAVE8 biological activity screening. Active mutants. After mutagenesis, the encoded protein can be expressed recombinantly and the activity of the protein can be determined. In one preferred embodiment, the mutant GAVE8 protein can be assayed: (1) the ability to form a protein:protein interaction with a protein of the GAVE8 signaling pathway; (2) the ability to bind to a GAVE8 ligand (eg, SIP); (3) The ability to bind to a target protein in a cell. In another preferred embodiment, the ability of the mutant GAVE8 to modulate cell proliferation or cell differentiation can be determined. Printed by the Ministry of Economic Affairs Intellectual Property Office Employees' Consumption Cooperative The present invention comprises an anti-nuclear nucleic acid molecule, i.e., a nucleic acid molecule complementary to the positive strand of the encoded protein, e.g., a crypto strand complementary to a double-stranded complementary NA molecule or complementary to a subsense RNA sequence. Accordingly, the anti-strand nucleic acid can be bonded to the positive-nuclear acid via a hydrogen bond. The anti-strand nucleic acid can be complementary to all of the GAVE8 cryptophores, or only to portions thereof, such as all or part of the protein coding region (or open-architecture architecture). The anti-strand nucleic acid molecule can be an anti-nuclear nucleotide sequence encoding a non-coding region of a crypto-bank of GAVE8. Non-coding regions ("5· and 3, untranslated or flanking regions Ί are contiguous coding regions and non-translated to amino acids 5 and 3, sequences. Given a crypto-cap sequence encoding GAVE8 (eg sequence confirmation number:
1 )後’本發明之反股核酸可依據Watson以及Crick之鹼基 配對法則設計。反股核酸分子可互補至GAV E 8傳訊R N A 本纸張尺度適用中國國家插準(CMS ) A4規格(2]Οχ 297公麓) -19- 1250209 A7 B7 五、發明説明(d (請先閲讀背面之注意事項再填寫本頁} 的全部編碼區,但更佳之反股寡核苷酸僅互補至G A V E 8傳 訊RN A編碼或非編碼區部分。例如,反股寡核苷酸可互補 至GAVE8傳訊RNA之轉譯作用起始位點周圍的區域,例 如序歹IJ 5 ’ - G C A G C A G C C C C G A C TC C AT G - 3 ’(序歹[j 確認、號石馬 ·· 5)及 5’-(:0八丁000(:0〇06(:(:(:0八八60-3’(序歹[」確認號碼 :6)之寡核苷酸。反股寡核苷酸之長度可爲例如:約5、] 〇 、15、20、25、30、35、40、45或50個核苷酸。本發明 之反股核酸可使用技藝上已知的化學合成以及酵素的聯結 反應構築。例如,反股核酸(例如反股寡核苷酸)可使用天然 核苷酸或各種經修飾之核苷酸(例如:偶磷基硫代酸酯衍生 物、贄酸鹽衍生物以及經吖啶取代的核苷酸)化學地合成, 以增加分子的生物穩定性或增加反股及正股核酸之間形成 雙股核酸之物理穩定性。 經濟部智慧財產局員工消費合作社印製 可用以產生反股核酸之經修飾的核苷酸之實施例,包 括 5 -氟尿嘧啶、5 -溴尿嘧啶、5 -氯尿嘧啶、5 -碘尿嘧啶、 次黃嘌呤、黃嘌呤、4-乙醯基胞嘧啶、5-(羧基羥甲基)尿嘧 啶' 5-羧甲基胺甲基-2-硫尿苷、5-羧甲基胺甲基尿嘧啶、 二氫尿嘧啶、對-D-半乳糖基奎辛(queosine)、肌苷、|^6_異 戊烯基腺嘌呤、1 -甲基鳥糞嘌呤、1-甲基肌苷' 2,2-二甲基 鳥糞嘌呤、2-甲基腺嘌呤、2-甲基鳥糞嘌呤、3-甲基胞嘧啶 、5-甲基胞嘧啶、N6-腺嘌呤、7-甲基鳥糞嘌呤、5-甲胺基 甲基尿嘧啶、5-甲氧基胺甲基-2-硫尿嘧啶、β-D-甘露糖基 奎辛(queosine)、5-甲氧基羧甲基尿嘧啶、5-甲氧基尿嘧啶 、2-甲硫基-N6-異戊烯基腺嘌呤、尿嘧啶-5-氧基乙酸、丁 本紙張尺度適用中國國家標準(CNS ) A4規格(2】0X297公釐) 一 -20- 1250209 Μ Β7 經濟部智慧財產局員工消費合作社印製 五、發明説明(d 酮辛(butoxosine)、僞尿嘧啶、奎辛(queosine)、2-硫胞嘧 啶、5-甲基-2-硫尿嘧啶、2-硫尿嘧啶、4-硫尿嘧啶、5-甲 基尿嘧啶、尿嘧啶-5-氧基乙酸甲酯、5-甲基-2-硫尿嘧啶、 3-(3-胺基-3-N-2-羧丙基)尿嘧啶以及2,6-二胺基嘌呤。此 外,反股核酸可使用表現反股方向之載體以生物性方式製 作(即插入反股目標核酸後轉錄RNA,在以下之次小節中會 作進一步的描述)。 本發明之反股核酸分子一般係投用至患者或在細胞的 傳訊RNA及/或編碼GAVE8蛋白質之基因體DNA的原位產 生雜交或結合,從而抑制蛋白質之表現,例如抑制轉錄及/ 或轉譯作用。雜交可爲習見的核苷酸互補以形成穩定的雙 股體,或例如反股核酸分子在雙螺旋的主要溝槽經由特定 的交互作用結合至DNA雙股體。本發明反股核酸分子投藥 路徑之實施例包括在組織位點直接地注射。此外,反股核 酸分子可經修飾後標定選擇的細胞,然後全身性的投用。 例如在全身的投藥時,反股分子可經修飾使彼可專一地結 合至表現在選擇的細胞表面之受體或抗原,例如可將反股 核酸分子聯結於可結合至細胞表面受體或抗原肽類之抗體 。反股核酸分子亦可使用描述在此之載體運送至細胞。爲 了使反股分子在細胞內達到充分的濃度,在載體構築體中 的反股核酸分子較佳者係置於受強烈的RNA聚合酶(po丨)丨丨 或pol III啓動子控制的位置。 本發明之反股核酸分子可爲^ -變旋異構的核酸分子。 α -變旋異構的核酸分子可與互補的RNA形成相互平行的 (請先閲讀背面之注意事項再填寫本頁} -裝· f 本紙張尺度適用中國國家標準(CMS ) A4規格(210 X 297公釐) -21 - 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(d 特定之雙股雜交(Gaultier et a丨.,Nucleic Acids Res (1 987)1 5:6625-6641)。反股核酸分子亦可包含甲基核糖核 音酸(Inoue et a I., (1987) Nucleic Acids Res 15:6131-6148)或嵌合的 RNA-DNA 類似物(Inoue et a I.,( 1 9 8 7 ) F E B S Left 215: 327-330)〇 本發明亦包含核糖酶。核糖酶爲具有核糖核酸酶活性 、能切斷具有互補區域的單股核酸(例如傳訊RNA)的催化 性 RNA分子。因此,核糖酶(例如鎚頭核糖酶,描述於 Haselhoff et a 丨.,Nature(1988)334: 585-591)可用以催化 分解GAVE8傳訊RNA轉錄本,從而抑制GAVE8傳訊RNA 之轉譯作用。可基於揭示於此之GAVE8互補DNA核苷酸 序列(例如序列確認號碼:1 )設計具有編碼G A V E 8核酸特 異性之核糖酶。例如,可構築四膜蟲屬L-1 9 IVS_ RNA衍生 物,其中活性部位之核苷酸序列互補至編碼GAVE8傳訊 RNA中之被分解的核苷酸序列。參閱例如:Cech et al.之 美國專利第4,987,07 1號;以及Cech et al·之美國專利第 5,116,742號。此外,GAVE8傳訊RNA可用以從RNA分 子群中選擇具有專一性核糖核酸酶活性之催化型RNA。參 閱例如,Bartel et al., Science (1993) 261:1411-1418 ° 本發明亦包含形成三倍螺旋狀構造的核酸分子。例如 ,使用互補至GAVE8調控區域(例如GAVE8啓動子及/或 增強子)的導向核苷酸序列可形成三倍螺旋狀構造以預防 GAVE8基因在標的細胞中轉錄,可抑制GAVE8基因表現 。參閱 Helene, Anticancer Drug D i s (1 991) 6(6): 569; 本&張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) — -22- (讀先閲讀背面之注意事項再填寫本頁) 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製1) The anti-stock nucleic acid of the present invention can be designed according to the base pairing rules of Watson and Crick. Anti-nuclear nucleic acid molecules can be complementary to GAV E 8 communication RNA. This paper scale is applicable to China National Interpolation (CMS) A4 specification (2) 297 297 麓) -19- 1250209 A7 B7 V. Invention description (d (please read first) Note on the back side of the full coding area of this page, but better anti-strand oligonucleotides are only complementary to the GAVE 8 signaling RN A coding or non-coding region. For example, anti-strand oligonucleotides can be complementary to GAVE8 The region surrounding the start site of the translation of the RNA, such as the sequence 歹IJ 5 ' - GCAGCAGCCCCGAC TC C AT G - 3 ' (preface j [j confirm, number Shima·· 5) and 5'-(:0 octa 000(:0〇06(:(:(:0八八60-3'(序歹[" confirmation number: 6)) oligonucleotide. The length of the anti-strand oligonucleotide can be, for example, about 5, 〇, 15, 20, 25, 30, 35, 40, 45 or 50 nucleotides. The anti-nucleic acid of the present invention can be constructed using chemical synthesis and enzyme binding reactions known in the art. For example, anti-nucleic acid Natural nucleotides or various modified nucleotides (eg, phosphonothioate derivatives) can be used (eg, anti-strand oligonucleotides) Chemical synthesis of thiocyanate derivatives and acridine-substituted nucleotides to increase the biostability of the molecule or increase the physical stability of the formation of double-stranded nucleic acids between the anti-strand and the nucleus. The Property Bureau Staff Consumer Cooperative prints examples of modified nucleotides that can be used to generate anti-nuclear nucleic acids, including 5-fluorouracil, 5-bromouracil, 5-chlorouracil, 5-iodouracil, and hypoxanthine. , Astragalus, 4-ethionylcytosine, 5-(carboxylhydroxymethyl)uracil' 5-carboxymethylaminemethyl-2-thiouridine, 5-carboxymethylaminemethyluracil, II Hydrouracil, p-D-galactosyl quinosine, inosine, |6-isopentenyl adenine, 1-methylguanine, 1-methylinosine 2,2- Dimethylguanosper, 2-methyladenine, 2-methylguanine, 3-methylcytosine, 5-methylcytosine, N6-adenine, 7-methylguanine, 5 -Methylaminomethyluracil, 5-methoxyaminemethyl-2-thiouracil, β-D-mannosyl quinosine, 5-methoxycarboxymethyluracil, 5- Methoxyuracil, 2-methylthio -N6-isopentenyl adenine, uracil-5-oxyacetic acid, Dingben paper scale applicable to China National Standard (CNS) A4 specification (2) 0X297 mm) -20- 1250209 Μ Β7 Ministry of Economics intellectual property Bureau employee consumption cooperative printing 5, invention instructions (d oxin (butoxosine), pseudo-uracil, quesine (queosine), 2-thiocytosine, 5-methyl-2-thiouracil, 2-thiouracil , 4-thiouracil, 5-methyluracil, methyl uracil-5-oxyacetate, 5-methyl-2-thiouracil, 3-(3-amino-3-N-2- Carboxypropyl) uracil and 2,6-diaminoguanidine. In addition, anti-nuclear nucleic acids can be made biologically using a vector that exhibits anti-stranding (i.e., transcribed RNA after insertion of a counter-stranded target nucleic acid, as further described in the next subsection). The anti-stranded nucleic acid molecule of the present invention is generally administered to a patient or to in situ hybridization or binding of a cell-sending RNA and/or a genotype DNA encoding a GAVE8 protein, thereby inhibiting protein expression, such as inhibition of transcription and/or translation. effect. Hybridization can be a complementary nucleotide complement to form a stable duplex, or for example, a counter-nucleic acid molecule can bind to a DNA duplex via a particular interaction in the major groove of the duplex. Examples of the administration route of the anti-nucleic acid molecule of the present invention include direct injection at a tissue site. In addition, anti-nuclear acid molecules can be modified to calibrate selected cells and then administered systemically. For example, when administered systemically, the anti-strand molecule can be modified such that it can specifically bind to a receptor or antigen present on the surface of the selected cell, for example, the anti-strand nucleic acid molecule can be linked to a cell surface receptor or antigen. An antibody to a peptide. Anti-nuclear nucleic acid molecules can also be delivered to cells using the vectors described herein. In order to achieve sufficient concentration of the anti-strand molecule within the cell, the anti-nuclear nucleic acid molecule in the vector construct is preferably placed under the control of a strong RNA polymerase (po丨) or pol III promoter. The anti-nucleic acid molecule of the present invention may be a mutameric amino acid molecule. The α-raceomeric nucleic acid molecule can be parallel to the complementary RNA (please read the back of the note first and then fill out this page) - Loading · f This paper size applies to the Chinese National Standard (CMS) A4 specification (210 X 297 mm) -21 - 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Employees Consumption Cooperative Printed 5, Invention Description (d Specific twin crosses (Gaultier et a丨., Nucleic Acids Res (1 987) 1 5: 6625- 6641). The anti-nuclear nucleic acid molecule may also comprise methylribose nuclear acid (Inoue et a I., (1987) Nucleic Acids Res 15: 6131-6148) or chimeric RNA-DNA analog (Inoue et a I. (1 9 8 7 ) FEBS Left 215: 327-330) The present invention also encompasses a ribozyme which is a catalytic activity of having a ribonuclease activity and capable of cleaving a single-stranded nucleic acid having a complementary region (for example, a signaling RNA). RNA molecules. Thus, ribozymes (such as hammerhead ribozymes, described in Haselhoff et al., Nature (1988) 334: 585-591) can be used to catalyze the breakdown of GAVE8 signaling RNA transcripts, thereby inhibiting the translation of GAVE8 signaling RNA. Based on the GAVE8 complementary DNA nucleotide sequence disclosed herein (eg sequence confirmation number: 1) designed with a ribozyme encoding a GAVE 8 nucleic acid specificity. For example, a Tetrahymena L-1 9 IVS_ RNA derivative can be constructed in which the nucleotide sequence of the active site is complementary to the coding GAVE8 message. For the decomposed nucleotide sequence in the RNA, see, for example, U.S. Patent No. 4,987,07, to Cech et al., and U.S. Patent No. 5,116,742 to Cech et al. In addition, GAVE8 signaling RNA can be used from RNA molecules. A catalytic RNA having specific ribonuclease activity is selected from the population. See, for example, Bartel et al., Science (1993) 261: 1411-1418 ° The present invention also encompasses nucleic acid molecules that form a triple helical structure. For example, The targeting nucleotide sequence complementary to the GAVE8 regulatory region (eg, the GAVE8 promoter and/or enhancer) forms a triple-coiled construct to prevent transcription of the GAVE8 gene in the target cell and inhibits GAVE8 gene expression. See Helene, Anticancer Drug D is (1 991) 6(6): 569; This & Zhang scale applies Chinese National Standard (CNS) A4 specification (210X297 mm) — -22- (Read the first note on the back and refill Write this page) 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing
五、發明説明(j Helene, Ann NY Acad Sci (1 992) 660:27 ;及 Maher, Bioassays (1 992) 1 4(1 2):807 〇 在較佳的具體實施例中,本發明之核酸分子可修飾鹼 基部份、醣側鍵或磷酸鹽骨幹以改良(例如)分子之穩定性、 雜交或溶解度。例如,核酸之去氧核醣磷酸鹽骨幹可經修 飾以產生肽核酸(參閱 Hyrup et al·, Bioorganic & Medicinal Chemistry (1 996) 4:5)。本文術語之"肽核酸''或 "PNA"意指核酸模仿劑,例如DNA模仿劑,其中去氧核醣 磷酸鹽骨幹被僞肽骨幹取代,僅保留四種天然的核酸鹼基 。中性的PNA骨幹已展示在低離子強度之條件下可允許 DNA與RNA專一的雜交。合成PNA寡聚物可使用標準固 相肽合成準則進行,描述於H y「u p e t a丨.(1 9 9 6),s u p r a ; Perry-OKeefe et al., Proc Natl Acad Sci USA(1 996)93: 14670° P N A化之G A V E 8可用於治療以及診斷用途。例如 p N A可作爲序列專一性調控基因表現之反股或抗原劑,例 如,誘導轉錄或遏止轉譯作用或抑制複製。p NA化之 G A V Ε 8亦可用於例如分析基因之單一的鹼基對突變,例如 P N A定向的P C R夾;用於結合其它酵素(例如s 1核酸酶) 作爲人造的限制酶(H y r u p (1 9 9 6),s u p r a),或作爲d N A序 列及雜交之探針或引子(Hyrup(1 996), sUpra ; per「y一 O’Keefe et al.(1 996), supra)。 另一具體實施例中PNA化之GAVE8可經修飾,例如 在PNA上黏附親脂的或其它輔助基團,以形成pma-DNA 本紙張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) (請先閲讀背面之注意事項再填寫本頁) 袭· 訂 P. -23- 經濟部智慧財產局員工消費合作社印製 1250209 kl B7五、發明説明(2) 嵌合體,或使用脂球體或其它藥物傳輸技藝上已知的技藝 ,以增進其穩定性、專一性或細胞的攝入。合成PNA-DNA 嵌合體之技藝描述於 Hyrup(1 996),supra,Finn et al., Nucleic Acids Res (1 996) 2 4(1 7):3357-63, Mag et al., Nucleic Acids Res ( 1 989) 1 7:5973 ;及 Peterser et a I., Bioorganic Med C· hem Lett (1975) 5:1119。 II.分離GAVE8蛋白質以及抗-GAVE8抗體 本發明特色之一係關於分離GAVE8蛋白質,及其生物 活性的部份、與適當的多肽斷片,例如作爲免疫原引發抗-GAVE8抗體。在具體實施例之一中,天然的GAVE8蛋白 質可使用標準蛋白質純化技藝經適當的純化,分離自細胞 或組織。另一具體實施例中,GAVE8蛋白質可經重組DNA 技藝進行製作。重組表現之外,GAVE8蛋白質或多肽可使 用標準肽合成技藝化學地合成。 ’’分離”或”純化的"GAVE8蛋白質或其生物活性的部分 實質上不含細胞的材料或其它細胞或組織蛋白質,或實質 上不含合成時之化學前驅物或其它化學藥品的污染。"實質 上不含細胞的材料”包括分離自細胞成份或重組製作蛋白質 的細胞之GAVE8蛋白質製劑。因此,實質上不含細胞的材 料之G A V E 8蛋白質,包括少於約30 %、2 0 %、1 0 %或5 % ( 乾重)之非GAVE8蛋白質(本文中亦稱爲"污染蛋白質”)之 G A V E 8蛋白質製齊ij。當G A V E 8蛋白質或其生物活性的咅5 分係重組製作時,較佳者實質上亦不含培養基,即培養基 (請先閱讀背面之注意事項再填寫本頁) 裝 訂 本纸張尺度適用中國國家標準(CNS ) A4規格(210X297公楚) -24 - !25〇2〇9 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(2) 少於約20%、1 〇°/。或5°/◦之蛋白質製劑體積。當GAVE8蛋 白質係以化學合成製作時,較佳者實質上不含化學的前驅 物或其它化學藥品,表示將合成蛋白質之化學前驅物或其 它化學藥品分離。據此,該GAVE8蛋白質製劑少於約30% 、20%、1 0%或5%(乾重)之化學前驅物或非GAVE8之化學 藥品。 GAVE8蛋白質生物活性的部份包括包含充分的相同於 或源自 GAVE8蛋白質胺基酸序列之肽類(例如展示於序列 確認號碼:2之胺基酸序列),其可比全長GAVE8蛋白質包 括較少之胺基酸,並展現至少一個GAVE8蛋白質之活性。 生物活性的部份通常包含至少一個GAVE8蛋白質活性之結 構區或基元。GAVE8蛋白質生物活性的部分可爲多肽,即 例如:1 0、25、50、1 00或更多長度之胺基酸。較佳的生 物活性的胜肽包括一個或多個確認的GAVE8構造的結構區 ,例如第三細胞內的環形結構區(例如序列確認號碼:2)。 此外,刪除蛋白質之其它區域的其它生物活性的部份 ,可用重組技藝製備並評估天然的GAVE8蛋白質之一種或 多種功能的活性。 較佳的GAVE8蛋白質其胺基酸序列展示於序列確認號 碼·· 2。其它適用的GAVE8蛋白質則爲由於天然的對偶基 因的變異或誘變使胺基酸序列與序列確認號碼:2不同’但 仍保留蛋白質功能的活性之實質上相同於序列確認號碼‘ :2 的蛋白質。例如該GAVE8蛋白質以及多胜肽具有至少一個 描述在此的生物活性。 (請先閱讀背面之注意事項再填寫本頁) 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -25- 1250209 經濟部智慧財產局員工消費合作社印製 kl B7五、發明説明( 據此,適用的GAVE8蛋白質,包括胺基酸序列與序列 確認號碼:2之至少約8 8 %、較佳者 9 0 %、9 3 %、9 5 %或 99%相同之胺基酸序列且保留序列確認號碼:2之GAVE8 蛋白質功能活性的蛋白質。其它實例中,爲與GAVE8第三 細胞內的環形結構區(序列確認號碼:2)之胺基酸序列有 55%、65%、75%、85%、95% 或 99%相同之 GAVE8 蛋白 質。較佳的具體實施例中GAVE8蛋白質仍保留序列確認號 碼:2之GAVE8蛋白質的功能活性。 爲了測定二種胺基酸序列或二種核酸之相似百分比, 可將序列調準以進行最理想的比對(例如’可在第一胺基酸 序列或核酸序列引入間隙與第二胺基或核酸序列進行最理 想的校整)。然後比較對應於胺基酸位置或核苷酸位置之胺 基酸殘基或核苷酸。當第一序列位置與對應的第二序列位 置有相同之胺基酸殘基或核苷酸,則表示該分子在該位置 相同。二種序列間之相似百分比是序列中分享相同位置數 目之函數(即相似百分比=相同位置數目/位置總數(例如重 疊位置)x 1 00)。在具體實施例之一中,二種序列之長度相 同。 可使用數學算則測定二種序列間之相似百分比。數學 算則較佳之非限制的實施例是利用Ka「lin et al., Proc Natl Acad Sci USA (1 990) 87:2264、經修飾之 Karlin et al., Proc Natl Acad Sci USA (1993) 90:5873-5877 算貝ij 比較二 種序列。該算則已倂入NBLAST及XBBLAST程式,參見 Altschul et al., J Mol Bio(1990)215: 403 〇 BLAST 核苷酸 本紙張尺度適用中國國家標準(CNsYa4規格(210X 297公釐) ~ ' -26- (請先閲讀背面之注意事項再填寫本頁) 裝. 125〇2〇9 kl B7 五、發明説明(2) 搜尋可用NBLAST程式進行(分數 =100,字長度 =12)以 取得本發明GAVE8核酸分子同源的核苷酸序列。BLAST蛋 白質搜尋可用XBLAST程式進行(分數 =50,字長度 =3) 以取得本發明GAVE8蛋白質分子同源的胺基酸序列。比對 時爲了得到間隙的校整,可利用間隙的 B LAST,描述於 Altschul et al., Nucleic Acids Res (1 997) 25:3389 〇 此外 ’可用PSI-BLAST進行反覆的搜尋,偵測分子間之親疏關 係。Altschul et al.,(1 997) supra。當利用 BLAST、間隙的 BLAST、及PS卜BLAST程式時,各程式(例如XBLAST及 NBLAST)可用預設之參數。參閱 http : "w w w. n c b i · η 丨 m . n i h · g 〇 v。 數學算則另一較佳的非限制的實施例爲利用Myers et al·,CABI〇S(1 988)4 : 1 1-17算則比較序列。該算則已倂入 校整程式(version 2.0)爲GCG序列校整套裝軟體的一部分 。當利用校整程式比較胺基酸序列時,可使用PAM 120加 權殘基表,間隙長度處罰爲1 2,間隙處罰爲4。 二種序列間之相似百分可使用相似於說明如上之技藝( 含或不含間隙)測定。計算相似百分比,僅計數精確的配對 〇 本發明亦提供GAVE8嵌合型或融合型蛋白。本文之 GAVE8”嵌合型蛋白質”或”融合型蛋白”包含操作性聯結於非 GAVE8多狀之GAVE8多肽。"GAVE8多肽••意指具有對應 至GAVE8胺基酸序列之多肽,而”非GAVE8多肽"意指具 有對應至與GAVE8蛋白質實質上不相同的胺基酸序列之多 本紙張尺度適用中國國家標準(CNS ) A4規袼(210X 297公釐) (請先閱讀背面之注意事項再填寫本頁) ip 裝· 經濟部智慧財產局員工消費合作社印製 -27- 1250209 A7 B7 五、發明説明( 肽,例如與GAVE8蛋白質不同的蛋白質,其可源自相同或 不同的生物體。在GAVE8融合型蛋白中,GAVE8多肽可 相應至所有或部分之GAVE8蛋白質,較佳者至少一個 GAVE8蛋白質的生物活性部分。在融合型蛋白中,本文術 語之”操作地聯結的”意指GAVE8多肽以及非GAVE8多肽 相互融合在相同的框架上。非 GAVE8多肽可融合至 GAVE8多肽的 N-端或C-端。適用的融合型蛋白爲GST-GAVE8融合型蛋白,其中GAVE8序列融合至谷胱甘肽-s-轉移酶(GST)序列的 C-端。該融合型蛋白可增進重組型 GAVE8之純化。 在較佳具體實施例中,本發明的第三細胞內回路(丨L3 )( 即從序列確認號碼·· 2之大約214至約252)係藉由 PCR 放大IL3,並將其產物次選殖於載體上(例如,pGEX-2T)而 與GST融合。所產生的構築體可引入宿主細胞(例如大腸桿 菌),該構築體可經適當的小分子(例如異丙基-1 -硫基-冷· D-哌喃半乳糖苷)誘發及表現,並予以純化(參閱例如,Lee et al., J Biol C he m (1 996 )2 7 1 (1 9): 1 1272-1 1279)。 在某些宿主細胞(例如哺乳動物的宿主細胞)中,使周異 性的信號序列可增加GAVE8表現及/或分泌。例如,可使 用桿狀病毒被膜蛋白質之gpe®分泌序列作爲異性的信號序 歹IJ (Current Protocols in Molecular Biology, Ausubel et al.,eds.,John Wiley & Sons, 1992)。其它真核的異性信 號序列的實施例包括:蜂毒素及人類胎盤的鹼性磷酯酶的 分泌序列(Stratagene; La Jolla,California)。另一實施例 本紙張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) (請先閲讀背面之注意事項再填寫本頁) im, 裝 經濟部智慧財產局員工涓費合作社印製 -28- 1250209 A7 五、發明説明( 中,適用的原核異性信號序列包括 PhoA分泌型信號 (Sambrook et al·,supra)以及蛋白質 A的分泌型信號 (Pharmacia Biotech; Piscataway, New Jersey)。 在另一具體實施例中,融合型蛋白爲GAVE8-免疫球蛋 白融合型蛋白,其中所有或部分GAVE8係融合至源自免疫 球蛋白之蛋白質類群序列。本發明之GAVE8-免疫球蛋白融 合型蛋白可倂入藥學組成物並投用於患者以抑制細胞表面 之GAVE8配體與GAVE8蛋白質之間的交互作用,從而抑 制活體內經GAVE8-調節的訊息傳遞。GAVE8-免疫球蛋白 融合型蛋白可用以影響GAVE8同源配體的生物效性。抑制 GAVE8配體-GAVE8之交互作用,在治療上適於治療增殖 及分化性病症並調控(例如促進或抑制)細胞之倖存。此外, 本發明之GAVE8-免疫球蛋白融合型蛋白可作爲免疫原以使 患者產生抗-GAVE8抗體,用於純化GAVE8配體及篩選測 定確認能抑制GAVE8配體分子與GAVE8交互作用之分子 〇 本發明之較佳GAVE8嵌合型或融合型蛋白係可用標準 重組D N A技藝製作。例如,依據習見的技藝將編碼不同多 肽序列之D N A斷片聯結在共同框架上,例如使用鈍端或黏 性端進行聯結,以限制酶水解提供適當的聯結端,充塡補 平黏性端,以鹼性磷酯酶處理避開不令人滿意的聯結,以 及進行酵素的聯結。在另一具體實施例中,可用習見的技 藝(包括自動化DNA合成儀)合成融合基因。此外,以pc R 進行放大基因斷片時,可使用在二個連續不斷的基因斷片 本纸張尺度適用中國國家標準( ^NS ) A4規格(210X297^7 -— -29- (請先閱讀背面之注意事項再填寫本頁) -裝· 訂V. INSTRUCTIONS (j Helene, Ann NY Acad Sci (1 992) 660:27; and Maher, Bioassays (1 992) 1 4(1 2): 807 较佳 In a preferred embodiment, the nucleic acid of the invention The molecule may modify the base moiety, the sugar side bond or the phosphate backbone to improve, for example, the stability, hybridization or solubility of the molecule. For example, the deoxyribose phosphate backbone of the nucleic acid may be modified to produce a peptide nucleic acid (see Hyrup et Al·, Bioorganic & Medicinal Chemistry (1 996) 4:5). The term "peptide nucleic acid" or "PNA" in this context means a nucleic acid mimicking agent, such as a DNA mimetic, wherein the deoxyribose phosphate backbone is Pseudopeptide backbone substitution, retaining only four natural nucleic acid bases. Neutral PNA backbone has been shown to allow DNA-RNA specific hybridization at low ionic strength. Synthetic PNA oligomers can be synthesized using standard solid phase peptides The guidelines are described in H y "upeta丨. (1 9 9 6), supra; Perry-OKeefe et al., Proc Natl Acad Sci USA (1 996) 93: 14670° PNAized GAVE 8 for treatment and diagnosis Use, for example, p NA can be used as a sequence specific An anti-femoral or antigenic agent that modulates gene expression, for example, inducing transcription or suppressing translation or inhibiting replication. The pNA-derived GAV Ε8 can also be used, for example, to analyze single base pair mutations of a gene, such as PNA-directed PCR clamps; Used to bind other enzymes (such as s 1 nuclease) as an artificial restriction enzyme (H yrup (1 9 9 6 ), supra), or as a probe or primer for d NA sequences and hybridization (Hyrup (1 996), sUpra Per "y-O'Keefe et al. (1 996), supra). In another embodiment, PNA-formed GAVE8 may be modified, for example by attaching a lipophilic or other ancillary group on the PNA to form a pma; -DNA This paper size is applicable to China National Standard (CNS) A4 specification (210X297 mm) (please read the note on the back and fill out this page). Attack P. -23- Printed by the Intellectual Property Office of the Ministry of Economic Affairs 1250209 kl B7 V. INSTRUCTIONS (2) Chimeras, or techniques known in the art of using lipid globules or other drugs to enhance their stability, specificity or cellular uptake. Techniques for synthesizing PNA-DNA chimeras Described in Hyrup (1 996), supr a, Finn et al., Nucleic Acids Res (1 996) 2 4(1 7): 3357-63, Mag et al., Nucleic Acids Res (1 989) 1 7:5973; and Peterser et a I., Bioorganic Med C. hem Lett (1975) 5:1119. II. Isolation of GAVE8 Protein and Anti-GAVE8 Antibody One of the features of the present invention relates to the isolation of the GAVE8 protein, and its biologically active portion, with appropriate polypeptide fragments, e.g., as an immunogen to elicit an anti-GAVE8 antibody. In one embodiment, the native GAVE8 protein can be isolated from cells or tissues by appropriate purification using standard protein purification techniques. In another embodiment, the GAVE8 protein can be produced by recombinant DNA techniques. In addition to recombinant expression, GAVE8 proteins or polypeptides can be chemically synthesized using standard peptide synthesis techniques. The 'isolated" or "purified" GAVE8 protein or a biologically active portion thereof is substantially free of cellular material or other cellular or tissue proteins, or substantially free of contamination by chemical precursors or other chemicals upon synthesis. "Substantially cell-free material" includes GAVE8 protein preparations isolated from cellular components or cells that recombinantly make proteins. Thus, GAVE 8 proteins of substantially cell-free materials, including less than about 30%, 20% The GAVE 8 protein of 10% or 5% (dry weight) of non-GAVE8 protein (also referred to herein as "contaminating protein") is prepared. When the GAVE 8 protein or its biologically active 咅5 line is recombinantly produced, it is preferable that the medium is substantially free of the medium, that is, the medium (please read the note on the back and then fill in the page). The bound paper size applies to the Chinese country. Standard (CNS) A4 specification (210X297 public Chu) -24 - !25〇2〇9 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention description (2) less than about 20%, 1 〇 ° /. Or a protein preparation volume of 5 ° / ◦. When the GAVE8 protein is produced by chemical synthesis, it is preferably substantially free of chemical precursors or other chemicals, indicating the separation of chemical precursors or other chemicals that synthesize proteins. Accordingly, the GAVE8 protein formulation is less than about 30%, 20%, 10% or 5% (dry weight) of chemical precursors or non-GAVE8 chemicals. The portion of the biological activity of the GAVE8 protein comprises a peptide comprising substantially the same or derived from the GAVE8 protein amino acid sequence (eg, the amino acid sequence shown in SEQ ID NO: 2), which may comprise less than the full length GAVE8 protein. Amino acid and exhibiting at least one GAVE8 protein activity. The biologically active portion typically comprises at least one structural region or motif of GAVE8 protein activity. The portion of the biological activity of the GAVE8 protein may be a polypeptide, i.e., an amino acid of, for example, 10, 25, 50, 100 or more. Preferred bioactive peptides include one or more structural regions of a confirmed GAVE8 construct, such as a circular structural region within a third cell (e.g., sequence confirmation number: 2). In addition, other biologically active portions of other regions of the protein can be deleted and the activity of one or more functions of the native GAVE8 protein can be prepared and evaluated using recombinant techniques. A preferred GAVE8 protein has its amino acid sequence shown in the sequence confirmation number. Other suitable GAVE8 proteins are proteins whose amino acid sequence differs from the sequence confirmation number: 2 due to mutation or mutagenesis of the native dual gene but retains protein function substantially identical to the sequence confirmation number ':2 . For example, the GAVE8 protein as well as the multi-peptide have at least one biological activity described herein. (Please read the notes on the back and fill out this page.) This paper scale applies to China National Standard (CNS) A4 specification (210X 297 mm) -25- 1250209 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printed kl B7 V. Invention Description (According to this, a suitable GAVE8 protein comprising an amino acid having an amino acid sequence of at least about 8 8 %, preferably 90%, 93%, 95 % or 99% identical to the sequence confirmation number: Sequence and retention sequence confirmation number: 2 GAVE8 protein functionally active protein. In other examples, 55%, 65% of the amino acid sequence with the circular structural region (sequence confirmation number: 2) in the third cell of GAVE8 75%, 85%, 95% or 99% identical GAVE8 protein. In a preferred embodiment, the GAVE8 protein retains the functional activity of the sequence confirmation number: 2 of the GAVE8 protein. To determine the two amino acid sequences or two A similar percentage of nucleic acid, the sequences can be aligned for optimal alignment (eg, 'the optimal alignment can be performed with the second amino group or nucleic acid sequence in the first amino acid sequence or the nucleic acid sequence introduction gap.) Comparison An amino acid residue or nucleotide at the amino acid position or nucleotide position. When the first sequence position has the same amino acid residue or nucleotide as the corresponding second sequence position, The molecules are identical at this position. The percent similarity between the two sequences is a function of the number of identical positions shared in the sequence (ie, similar percentage = number of identical positions / total number of positions (eg, overlapping positions) x 1 00). In one of the specific embodiments The lengths of the two sequences are the same. The mathematical algorithm can be used to determine the similarity percentage between the two sequences. The preferred non-limiting example of the mathematical calculation is to use Ka "lin et al., Proc Natl Acad Sci USA (1 990) 87:2264, Modified Karlin et al., Proc Natl Acad Sci USA (1993) 90:5873-5877 Calculate the two sequences. The algorithm has been incorporated into the NBLAST and XBBLAST programs, see Altschul et al. J Mol Bio (1990) 215: 403 〇BLAST nucleotides This paper scale applies to Chinese national standards (CNsYa4 specification (210X 297 mm) ~ ' -26- (please read the back note before filling this page). 125〇2〇9 kl B7 V. Invention (2) The search can be performed with the NBLAST program (score=100, word length=12) to obtain the nucleotide sequence homologous to the GAVE8 nucleic acid molecule of the present invention. The BLAST protein search can be performed by the XBLAST program (score=50, word length=3) To obtain the amino acid sequence homologous to the GAVE8 protein molecule of the present invention. In order to obtain the correction of the gap, B LAST can be used for gap detection, described in Altschul et al., Nucleic Acids Res (1 997) 25:3389 〇In addition, 'PSI-BLAST can be used for repeated searches to detect intermolecular The relationship between the two. Altschul et al., (1 997) supra. When using BLAST, gap BLAST, and PS BuLAST programs, various programs (such as XBLAST and NBLAST) can use preset parameters. See http : "w w w. n c b i · η 丨 m . n i h · g 〇 v. Another preferred non-limiting embodiment of the mathematical algorithm is to compare sequences using Myers et al., CABI(R) S (1 988) 4: 1 1-17. The algorithm has been incorporated into the calibration program (version 2.0) as part of the GCG sequence calibration package. When using the calibration procedure to compare amino acid sequences, the PAM 120 weighted residue table can be used with a gap length penalty of 12 and a gap penalty of 4. The percent similarity between the two sequences can be determined using techniques similar to those described above (with or without gaps). Calculate the percent similarity and count only the exact pairings. 〇 The invention also provides GAVE8 chimeric or fusion proteins. The GAVE8 "chimeric protein" or "fusion protein" herein comprises a GAVE8 polypeptide operably linked to a non-GAVE8 polymorph. "GAVE8 polypeptide•• means a polypeptide having a corresponding amino acid sequence to GAVE8, and “non-GAVE8 polypeptide" means having multiple paper sizes corresponding to amino acid sequences substantially different from GAVE8 protein for China National Standard (CNS) A4 Regulation (210X 297 mm) (Please read the note on the back and fill out this page) ip Packing · Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Print -27-1250209 A7 B7 V. Invention Description (Peptide, for example a protein different from the GAVE8 protein, which may be derived from the same or different organisms. In the GAVE8 fusion protein, the GAVE8 polypeptide may correspond to all or part of the GAVE8 protein, preferably at least one GAVE8 protein organism Active moiety. In a fusion protein, the term "operably linked" means that the GAVE8 polypeptide and the non-GAVE8 polypeptide are fused to each other on the same framework. The non-GAVE8 polypeptide can be fused to the N-terminus or C-terminus of the GAVE8 polypeptide. A suitable fusion protein is a GST-GAVE8 fusion protein in which the GAVE8 sequence is fused to the C-terminus of the glutathione-s-transferase (GST) sequence. Purification of recombinant GAVE8 can be enhanced. In a preferred embodiment, the third intracellular loop of the invention (丨L3) (i.e., from about 214 to about 252 of sequence confirmation number 2) is amplified by PCR. And subsequencing the product into a vector (eg, pGEX-2T) to fuse with GST. The resulting construct can be introduced into a host cell (eg, E. coli), which can be passed through a suitable small molecule (eg, isoform) Propyl-1 -thio-cold·D-galactopyranoside is induced and expressed and purified (see, for example, Lee et al., J Biol C he m (1 996 ) 2 7 1 (1 9) : 1 1272-1 1279). In certain host cells (eg, mammalian host cells), the heterologous signal sequence can increase GAVE8 expression and/or secretion. For example, glutamate envelope protein gpe® can be used. Secretory sequences serve as signal sequences for heterosexuality IJ (Current Protocols in Molecular Biology, Ausubel et al., eds., John Wiley & Sons, 1992). Examples of other eukaryotic heterosexual signal sequences include: melittin and human placenta Secretion sequence of alkaline phosphatase (Stratagene; La Jolla, California). Another embodiment of this paper scale applies to the Chinese National Standard (CNS) A4 specification (210X297 mm) (please read the note on the back and fill out this page) im, install the Ministry of Economic Affairs Intellectual Property Office staff fee Co-operative Printing -28-1250209 A7 V. INSTRUCTIONS (in the case, suitable prokaryotic signal sequences include PhoA secretory signals (Sambrook et al., supra) and protein A secretory signals (Pharmacia Biotech; Piscataway, New Jersey) . In another specific embodiment, the fusion protein is a GAVE8-immunoglobulin fusion protein in which all or a portion of the GAVE8 line is fused to a protein group sequence derived from an immunoglobulin. The GAVE8-immunoglobulin fusion protein of the present invention can be incorporated into a pharmaceutical composition and administered to a patient to inhibit the interaction between the GAVE8 ligand on the cell surface and the GAVE8 protein, thereby inhibiting GAVE8-regulated signaling in vivo. The GAVE8-immunoglobulin fusion protein can be used to affect the bioavailability of GAVE8 cognate ligands. Inhibition of the interaction of GAVE8 ligand-GAVE8 is therapeutically suitable for treating proliferative and differentiated disorders and modulating (e.g., promoting or inhibiting) cell survival. In addition, the GAVE8-immunoglobulin fusion protein of the present invention can be used as an immunogen to enable an anti-GAVE8 antibody to be produced in a patient, and is used for purifying a GAVE8 ligand and a molecular assay which confirms the interaction between the GAVE8 ligand molecule and GAVE8. Preferred GAVE8 chimeric or fusion protein lines of the invention can be made using standard recombinant DNA techniques. For example, according to conventional techniques, DNA fragments encoding different polypeptide sequences are linked to a common framework, for example, using a blunt end or a viscous end to bind to limit enzymatic hydrolysis to provide a suitable binding end, filling the viscous end, Alkaline phosphatase treatment avoids unsatisfactory linkages and the binding of enzymes. In another embodiment, the fusion gene can be synthesized using conventional techniques, including automated DNA synthesizers. In addition, when using PD R for amplification of gene fragments, it can be used in two consecutive gene fragments. The Chinese National Standard ( ^NS ) A4 specification (210X297^7 - -29- (Read the back) Precautions to fill out this page) - Loading · Booking
P 經濟部智慧財產局員工消費合作社印製 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(2) 之間產生互補的突出部分的固定引子,經後續退火及再放 大’即可產生嵌合的基因序列(參閱例如 Ausubel et al·, supra)。此外,許多已編碼融合部份(例如GST多肽)之表 現載體可市售得之。編碼GAVE8之核酸可選殖入該表現載 體,該融合部份可同框架的聯結於GAVE8蛋白質。 本發明亦關於GAVE8蛋白質變型(即其序列與GAVE8 胺基酸序列不同之蛋白質)。該變型的功能可作爲GAVE8 促效劑或GAVE8拮抗劑。GAVE8蛋白質變型可經誘變產 生,例如不連接的點突變或截斷GAVE8蛋白質。GAVE8 蛋白質促效劑可保留與天然形式GAVE8蛋白質實質上相同 的生物活性(或其次活性)。GAVE8蛋白質之拮抗劑可抑制 一種或多種天然形式GAVE8蛋白質之活性。例如競爭型結 合至包括GAVE8蛋白質之細胞信號串聯反應之下游或上游 元件。因此,在限制功能之變型處理下可引起專一的生物 效應。用具有天然形式蛋白質之次生物活性的變型治療患 者,其副作用低於以天然形式GAVE8蛋白質治療患者。 確認功能爲GAVE8促效劑或GAVE8拮抗劑之GAVE 8 蛋白質變型,係可篩選突變體(例如截斷突變體)之組合基因 庫中具有GAVE8蛋白質促效劑或拮抗劑活性之GAVE8蛋 白質。在具體實施例之一中,各種GAVE8變型之基因庫可 在核酸的層次上經組合性誘變產生並編碼各種基因庫。製 作GAVE8變型之各種基因庫的方法爲(例如)使用酵素聯結 合成的寡核苷酸混合物與基因序列,因而產生一組退化的 GAVE8序列,並用以表現各個多胜肽,或者表現內含本文 (請先閲讀背面之注意事項再填寫本頁) 裝- 本纸張尺度適用中國國家標準(CNS ) A4規格(2】OX 297公釐) -30- 經濟部智慧財產局員工消費合作社印製 1250209 A7 _____B7五、發明説明(j GAVE8序列之一組較大的融合型蛋白(例如由噬菌體顯示) 。有各種方法可從退化的寡核苷酸序列中產生G A V E 8變型 之基因庫。化學合成退化的基因序列可用自動DNA合成儀 進行,然後將合成的基因連結至適當的表現載體。使用退 化基因組的優點是只用一種混合物即可找到編碼所要求的 GAVE8序列組之所有序列。退化寡核苷酸之合成方法爲技 藝上已知的方法(參閱例如:Narang,Tetrahedron (1 983) 39:3; Itakura e t a I., Ann Rev Biochem (1984) 53:323; Itakura et al·,Science (1 984) 1 98:1 056; Ike et al., Nucleic Acid Res (1983) 11:477) 〇 此外’ GAVE8蛋白質編碼序列斷片之基因庫可用以產 生多種GAVE8斷片族群以篩選及後續的選擇GAVE8蛋白 質變型。在具體實施例之一中,編碼產生序列斷片之基因 庫的方法是將GAVE8編碼序列雙股的PCR斷片與核酸酶 在每分子僅約發生一個缺口之條件下反應,將雙股的DNA 變性分開,使D N A回復本性以形成雙股的D N A (其可包括 來自不同缺口產物之正股/反股對),將再形成之雙股體用 S1核酸酶處理以去除單股部份,再將所產生的斷片基因庫 聯結於表現載體。在該方法中,表現型基因庫可源自 GAVE8蛋白質編碼 N-端以及內部各種大小的斷片的序列 〇 有許多技藝上已知的技藝可篩選點突變或截斷法製作 的組合基因庫的基因產物,以及篩選互補D NA基因庫中具 有選擇性質的基因產物。該技藝可快速篩選GAVE8蛋白質 (請先閲讀背面之注意事項再填寫本頁) 本纸張尺度適用中國國家標準(CMS ) A4規格(210X 297公釐) -31 · 經濟部智慧財產局員工消費合作社印製 1250209 A7 ___B7五、發明説明( 經組合誘變產生的基因基因庫。最常用的技藝係能進行高 效能之分析、用於篩選一般將基因庫選殖入可複製的表現 載體之龐大的基因庫、將載體產生的基因庫轉形入適當的 細胞、以及在表現組合的基因之條件下偵測到所要求的活 性以增進編碼偵測到產物之載體的分離。總體遞歸誘變 (REM)是提高基因庫中具有功能之突變體的頻率之技術,可 用於結合篩選測定以確認GAVE8變型(Arkin et al.,Proc Natl Acad Sci USA (1 992) 8 9:781 1 -781 5; Delgrave et a I., Protein Engineering (1993) 6(3):327-331) 〇 分離的GAVE8蛋白質(或其部分或斷片)可作爲抗原, 使用製備多株及單株抗體的標準技藝,以產生結合GAVE8 之抗體。可使用全長GAVE8蛋白質,或者以本發明提供 GAVE8之免疫肽斷片作爲免疫原。GAVE8抗原型肽包含至 少 8個(較佳者 10、15、20、或30個)如序列確認號碼: 2之胺基酸序列的胺基酸殘基,且包含GAVE8之抗原決定 部位,因此產生抗體可與GAVE8形成專一的免疫複合體。 在具體實施例之一中,抗原決定部位可爲包含序列確認號 碼:2殘基之8合體。 相關特色中,抗原性肽包含的抗原決定部位是位於 GAVE8蛋白質表面之區域,例如親水性區域。由人類 GAVE8蛋白質序列之拒水性分析結果顯示序列確認號碼: 2中,特別在介於約胺基酸1至約37之間、介於約胺基酸 96至約1 1 1之間、介於約胺基酸1 77至約1 92之間以及介 於約胺基酸274以及約29之間的區域是親水性區域’因此 (請先閲讀背面之注意事項再填寫本頁) 裝·P Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperatives Printed 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperatives Printed V. Invention Description (2) A fixed primer that produces complementary protruding parts, which are subsequently annealed and re-amplified. A chimeric gene sequence can be generated (see, for example, Ausubel et al., supra). In addition, a number of expression vectors encoding a fusion moiety (e.g., a GST polypeptide) are commercially available. A nucleic acid encoding GAVE8 can be optionally incorporated into the expression vector, and the fusion moiety can be linked to the framework to the GAVE8 protein. The invention also relates to a GAVE8 protein variant (i.e., a protein whose sequence differs from the GAVE8 amino acid sequence). This variant functions as a GAVE8 agonist or a GAVE8 antagonist. GAVE8 protein variants can be produced by mutagenesis, such as point mutations that are not ligated or truncated GAVE8 proteins. The GAVE8 protein agonist retains substantially the same biological activity (or its secondary activity) as the native form of the GAVE8 protein. Antagonists of the GAVE8 protein inhibit the activity of one or more native form of the GAVE8 protein. For example, a competitive binding to a downstream or upstream element of a tandem reaction of a cell signal comprising a GAVE8 protein. Therefore, a specific biological effect can be caused by the modification of the restriction function. Treatment of a patient with a modification of the sub-biological activity of the native form of the protein has a lower side effect than treating the patient with the native form of GAVE8 protein. A GAVE 8 protein variant having a function as a GAVE8 agonist or a GAVE8 antagonist is identified as a GAVE8 protein having a GAVE8 protein agonist or antagonist activity in a combinatorial gene pool of a selectable mutant (e.g., a truncation mutant). In one embodiment, a library of various GAVE8 variants can be generated by combinatorial mutagenesis at the nucleic acid level and encode various gene repertoires. Methods for making various gene repertoires of the GAVE8 variant are, for example, the use of enzyme-linked oligonucleotide mixtures and gene sequences, thereby producing a set of degenerate GAVE8 sequences that are used to represent individual multi-peptides, or to express the inclusions herein ( Please read the notes on the back and fill out this page. Loading - This paper scale applies to China National Standard (CNS) A4 specification (2) OX 297 mm) -30- Ministry of Economic Affairs Intellectual Property Office Staff Consumer Cooperative Printed 1250209 A7 _____B7 V. INSTRUCTIONS (a large fusion protein of a group of j GAVE8 sequences (for example, shown by phage). There are various methods for generating a gene bank of GAVE 8 variants from degenerate oligonucleotide sequences. Chemical synthesis degradation The gene sequence can be performed using an automated DNA synthesizer, and the synthetic gene is then ligated into an appropriate expression vector. The advantage of using a degenerate genome is that all sequences encoding the desired GAVE8 sequence set can be found using only one mixture. Degenerate oligonucleotides The synthesis method is a method known in the art (see for example: Narang, Tetrahedron (1 983) 39:3; Itakura eta I., Ann Rev Biochem (1984) 53:323; Itakura et al., Science (1 984) 1 98:1 056; Ike et al., Nucleic Acid Res (1983) 11:477) In addition to the 'GAVE8 protein coding sequence fragment The gene pool can be used to generate a variety of GAVE8 fragment populations for screening and subsequent selection of GAVE8 protein variants. In one embodiment, the method for encoding a gene bank that produces sequence fragments is to double-strand the PCR fragments of the GAVE8 coding sequence with a nuclease. The reaction is carried out under the condition that only one gap occurs per molecule, and the double-stranded DNA is denatured to separate the DNA to restore the nature to form double-stranded DNA (which may include a positive/anti-strand pair from different gap products), which will be reformed. The double-strand is treated with S1 nuclease to remove the single-stranded portion, and the resulting fragment gene pool is linked to the expression vector. In this method, the phenotype gene library can be derived from the GAVE8 protein encoding N-terminal and various internal Sequences of Size Fragments There are a number of techniques known in the art for screening gene products of combinatorial gene banks made by point mutation or truncation, as well as for screening for complementary DNA libraries. Gene product. This technology can quickly screen GAVE8 protein (please read the back note first and then fill out this page) This paper scale applies to Chinese National Standard (CMS) A4 specification (210X 297 mm) -31 · Ministry of Economics intellectual property Bureau employee consumption cooperative printed 1250209 A7 ___B7 V. Invention description (gene gene library generated by combined mutagenesis. The most commonly used techniques are capable of performing high-performance analysis, screening large gene banks for gene library selection into replicable expression vectors, translating gene banks generated by vectors into appropriate cells, and performing combinations The desired activity is detected under the conditions of the gene to enhance the isolation of the vector encoding the detected product. Total Recursive Mutagenesis (REM) is a technique for increasing the frequency of functional mutants in a gene bank and can be used in conjunction with screening assays to confirm GAVE8 variants (Arkin et al., Proc Natl Acad Sci USA (1 992) 8 9:781 1 -781 5; Delgrave et a I., Protein Engineering (1993) 6(3): 327-331) 〇Isolated GAVE8 protein (or a portion or fragment thereof) can be used as an antigen, using multiple strains and monoclonal antibodies Standard skill to produce antibodies that bind to GAVE8. The full-length GAVE8 protein can be used, or the immunopeptide fragment of GAVE8 can be used as an immunogen in the present invention. The GAVE8 antigenic peptide comprises at least 8 (preferably 10, 15, 20, or 30) amino acid residues such as the amino acid sequence of the sequence confirmation number: 2, and comprises an epitope of GAVE8, thus resulting in The antibody forms a specific immune complex with GAVE8. In one embodiment, the epitope can be an 8-mer comprising a sequence confirmation number: 2 residues. In a related feature, the antigenic peptide comprises an epitope which is located in a region of the surface of the GAVE8 protein, such as a hydrophilic region. The results of water repellency analysis by human GAVE8 protein sequence showed sequence number: 2, especially between about 1 to about 37 of about amino acid, between about 96 to about 11 of about amino acid, between The region between 1 77 and about 1 92 of about amino acid and between about amino acid 274 and about 29 is a hydrophilic region 'so (please read the back note first and then fill out this page)
、1T mr. 本紙張尺度適用中國國家摞準(CNS ) A4規格(2】〇X 297公釐) -32- 1250209 A7 _____B7, 1T mr. This paper scale applies to China National Standard (CNS) A4 specifications (2) 〇 X 297 mm) -32- 1250209 A7 _____B7
五、發明説明(3(J 可編碼用於抗體產生之表面殘基。 (請先閲讀背面之注意事項再填寫本頁) GAVE8通常用於作爲抗原,以抗原免疫適當的動物(例 如:兔子、山羊、老鼠或其它哺乳動物)可製備出抗體。產 生免疫性的合適製劑可含有,例如:重組表現的GAVE8蛋 白質或化學合成的GAVE8多肽。製劑可進一步的包括佐劑 ,例如完全或不完全的F「eund佐劑、或相似的免疫刺激劑 。用產生免疫性的GAVE8製劑免疫適當的動物可誘發多株 抗-GAVE8抗體反應。 經濟部智慧財產局員工消費合作社印製 據此,本發明之另一特色係關於抗-GAVE 8抗體。本文 術語之”抗體”意指免疫球蛋白分子及免疫球蛋白分子之免疫 活性的部份,即含有專一結合GAVE8之抗原結合部位的分 子。專一結合於GAVE8的分子爲可結合於樣品(例如含有 天然的GAVE8之生物樣品)中之GAVE8、但實質上不結合 於樣品中其它分子之分子。免疫球蛋白分子中免疫活性部 份的實施例包括 F(ab)以及F(ab^2斷片,其係將抗體與酵素 (例如胃蛋白酶)反應而產生。本發明提供結合GAVE8的多 株及單株抗體。本文術語之”單株抗體"或”單株抗體組成物i 意指僅含有一種抗原結合部位,能與GAVE8的特定抗原決 定部位進行免疫反應的抗體分子族群。因此單株抗體組成 物通常在其免疫反應位點上對特定的GAVE8蛋白質呈現單 一的結合親和性。 對適當的動物用GAVE8抗原免疫可製備上述之多株的 抗-GAVE8抗體。免疫的動物中抗-GAVE8抗體之效價可在 一段時間內用標準技藝監測,例如使用固定化之GAVE8用 本纸張尺度適用中國國家標準(CNS ) A4規格(2】0X297公釐) -33- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印焚 五、發明説明(y 酵素聯結的免疫吸附測定(酵素聯結免疫抗體檢測法)。 視須要,直接對抗GAVE8的抗體分子可分離自哺乳動 物(例如血液)並用已知的技藝(例如蛋白質A色層分析法) 進一步的純化,以取得免疫球蛋白G溶析份。於免疫適當 的時間之後,例如當抗-GAVE8抗體之效價最高時,可自動 物取得產生抗體之細胞,並用標準技藝製備單株抗體,該 技藝例如融合瘤技術,最初描述於K 〇 h I e r e t a I.,N a t u r e (1 975) 256:495-497、人類 B 細胞融合瘤技術(Kohler et a I., Immunol Today (1 983) 4:72)、EBV-融合瘤技術(Cole e t a I., Monoclonal Antibodies and Cancer Therapy, (1 985),Alan R. Liss,Inc., pp. 77-96)或 Trioma 技藝。產 生融合瘤之技藝爲熟知的技藝(參閱Current Protocols in Immunology (1 994) Coligan e t a I., (eds.) John Wiley & Sons, I nc.,New York,NY)。簡言之,將永生性細胞株(一 般爲骨髓癌細胞株)融合於用上述GAVE8抗原免疫的哺乳 動物的淋巴細胞(一般爲脾細胞)上,篩選所產生的融合瘤細 胞之培養懸浮液,確認產生結合GAVE8之單株抗體的融合 瘤。 可使用任何許多淋巴細胞及永生性細胞株之熟知的實 驗準則產生抗-GAVE8單株抗體(參閱例如:Current Protocols in Immunology, supra; G a If re et a I., Nature (1977) 266:55052. Kenneth, in Monoclonal Antibodies: A New Dimension In Biological Analyses, Plenum Publishing Corp., New York, N.Y. (1 980);及 Lerner, (請先閲讀背面之注意事項再填寫本頁) 裝· 訂V. Description of the invention (3 (J can encode surface residues for antibody production. (Please read the back note first and then fill out this page) GAVE8 is usually used as an antigen to immunize appropriate animals with antigen (eg rabbit, Antibodies may be prepared by goats, mice or other mammals. Suitable formulations for producing immunity may contain, for example, recombinantly expressed GAVE8 protein or chemically synthesized GAVE8 polypeptide. The formulation may further comprise an adjuvant, such as complete or incomplete F "eund adjuvant, or a similar immunostimulant. Immunization of an appropriate animal with an immunogenic GAVE8 preparation can induce multiple anti-GAVE8 antibody responses. Printed by the Ministry of Economic Affairs, Intellectual Property Office, Staff Consumer Cooperative, accordingly, the present invention Another feature relates to anti-GAVE 8 antibodies. The term "antibody" as used herein refers to immunoglobulin molecules and immunologically active portions of immunoglobulin molecules, ie, molecules that contain a specific binding site for the antigen binding of GAVE8. The molecule of GAVE8 is GAVE8 which can be bound to a sample (for example, a biological sample containing natural GAVE8), but does not substantially bind Molecules of other molecules in the sample. Examples of immunologically active portions of immunoglobulin molecules include F(ab) and F(ab^2 fragments, which are produced by reacting an antibody with an enzyme (eg, pepsin). Providing a multi-strain and monoclonal antibody that binds GAVE8. The term "monoclonal antibody" or "monoclonal antibody composition i" as used herein means an antibody that contains only one antigen-binding site and can immunoreact with a specific epitope of GAVE8. Therefore, the monoclonal antibody composition usually exhibits a single binding affinity to a specific GAVE8 protein at its immunoreactive site. The anti-GAVE8 antibody of the above-mentioned multiple strains can be prepared by immunizing an appropriate animal with the GAVE8 antigen. The potency of the anti-GAVE8 antibody in animals can be monitored by standard techniques for a period of time, for example, using the immobilized GAVE8 with the paper size applicable to the Chinese National Standard (CNS) A4 specification (2) 0X297 mm) -33- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumption Cooperatives Printing and Burning Five, Invention Description (y enzyme-linked immunosorbent assay (enzyme-linked immunosorbent assay) As needed, antibody molecules directed against GAVE8 can be isolated from mammals (eg, blood) and further purified using known techniques (eg, protein A chromatography) to obtain immunoglobulin G lysates. After the time, for example, when the titer of the anti-GAVE8 antibody is highest, the antibody-producing cells can be obtained automatically, and monoclonal antibodies are prepared using standard techniques, such as fusion tumor technology, originally described in K 〇h I ereta I. , Nature (1 975) 256:495-497, Human B Cell Fusion Tumor Technology (Kohler et a I., Immunol Today (1 983) 4:72), EBV-fusion tumor technology (Cole eta I., Monoclonal Antibodies And Cancer Therapy, (1 985), Alan R. Liss, Inc., pp. 77-96) or Trioma skills. The art of producing fusion tumors is a well-known technique (see Current Protocols in Immunology (1 994) Coligan et al., (eds.) John Wiley & Sons, I nc., New York, NY). Briefly, an immortalized cell line (generally a bone marrow cancer cell line) is fused to lymphocytes (generally spleen cells) of a mammal immunized with the above GAVE8 antigen, and the resulting culture suspension of the fusion tumor cells is screened. A fusion tumor producing a monoclonal antibody that binds to GAVE8 was confirmed. Anti-GAVE8 monoclonal antibodies can be produced using well-known experimental guidelines for any of a number of lymphocytes and immortalized cell lines (see, for example, Current Protocols in Immunology, supra; G a If re et a I., Nature (1977) 266:55052 Kenneth, in Monoclonal Antibodies: A New Dimension In Biological Analyses, Plenum Publishing Corp., New York, NY (1 980); and Lerner, (please read the notes on the back and fill out this page)
P 本紙張尺度適用中國國家標準(CMS ) A4規格(210X297公釐) -34- 經濟部智慧財產局員工消費合作社印製 1250209 A7 __ B7五、發明説明(3) Yale J Biol M e d (1 9 8 1 ) 54 : 3 8 7-4 02 )。此外,一般熟悉此 技藝的熟手將認知亦可適用該方法的許多變異。通常永生 性細胞株(例如骨髓癌細胞株)係源自相同哺乳動物的淋巴細 胞。例如,鼠科動物融合瘤可使用本發明產生免疫性的製 劑免疫的老鼠之淋巴細胞與永生性老鼠細胞株(例如對內含 次黃嘌呤、胺基蝶呤以及胸腺嘧啶之培養液("hat培養液”) 具有敏感性之骨髓癌細胞株)加以製作。依據標準技藝許多 骨髓癌細胞株可作爲融合之伙伴,例如:P3-NS1/1-Ag4-1 、P3-x63-Ag8.653或Sp2/0-Ag14骨髓癌細胞株。以上之 骨髓癌細胞株可購自 ATCC。一般對HAT具有敏感性之老 鼠骨髓癌細胞可使用聚乙二醇("PEG")融合至老鼠脾細胞。 源於融合的融合瘤細胞可使用Η AT培養液加以選擇,其可 殺死未融合的以及非生產性的融合骨髓癌細胞(未融合的脾 細胞因爲彼未經轉形所以死於數天之後)。例如使用標準酵 素聯結免疫抗體檢測法測定,篩選融合瘤培養懸浮液中結 合GAVE8之抗體,可偵測產生本發明抗體之單株的融合瘤 細胞。 另一製備單分泌株抗體之融合瘤的方法中,用GAVE8 篩選重組型組合性免疫球蛋白基因庫(例如抗體噬菌體顯示 基因庫),從而分離結合GAVE 8之免疫球蛋白基因庫成員 ,可確認及分離單株的抗-GAVE8抗體。產生及篩選噬菌體 顯示基因庫之組套可市售得之(例如:Pharmacia重組型噬 菌體抗體系統,目錄號碼27-9400-01 ;以及Stratagene SurfZAP®Phage Display Kit,目錄號碼 24061 2卜 (請先閱讀背面之注意事項再填寫本頁) 本纸張尺度適用中國國家標準(CNS)A4規格(210X297公釐) -35- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(3$ 此外,尤其是可應用於產生及篩選抗體顯示基因庫之 方法及試劑的實施例可參見,例如:美國專利第5,223,409 號;PCT 公布號碼 WO 92/1 861 9 ; PCT 公布號碼 W0 91/1 7271 ; PCT 公布號碼 WO92/20791 ; PCT 公布號碼 W0 92/1 5679 ; PCT 公布號碼 W0 93/01 288 ; PCT 公布號碼 W092/01 047 ; PCT 公布號碼 W092/09690 ; PCT 公布號碼 W0 90/02809 ; Fuchs et a I., B io/Technology (1991) 9:1 370-1 372; Hay e t a I., Hum Anti bod Hybridomas (1 992) 3:81 -85; Huse et a I., Science (1 989) 246:1 275-1281; and Griffiths et al., EMBO J (1 993) 25 1 2:725-734 c 此外,可使用標準重組型D N A技藝製作包含人類及非 人類部份的重組型抗-GAVE8抗體(例如嵌合型及人類化的 單株抗體),彼係屬於本發明之範圍。該嵌合型及人類化的 單株抗體可使用技藝上已知的重組DNA技藝製作,該方法 例如描述於 PCT公布號碼WO87/0267 1 ;歐洲專利申請案 第1 84,1 87號;歐洲專利申請案第1 71,496號;歐洲專利 申請案第1 73,494號;PCT公布號碼WO86/01 533 ;美國 專利第4,81 6,567號;歐洲專利申請案第1 25,023號; Better et a I., Science(1988)240 : 1041-1043; Liu et a I., Proc Natl Acad Sci USA(1987)84 ·· 3439-3443 ; Lin et a I., J Immunol (1 987) 1 39:3521 -3526; Sun et a I., Proc Natl Acad Sci USA (1 987) 84:214-21 8; Nishimura e t a i., Cane Res (1 987) 47:999-1 005; Wood et al., Nature (請先閲讀背面之注意事項再填寫本頁) ip 裝· 訂 本纸張尺度適用中國國家標準(CNS ) Α4規格(210X297公釐) -36- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(3) (1985) 314:446-449; Shaw et a I., J Natl Cancer Inst (1988) 80:1 553-1559; Morrison, Science (1 985) 229:1202-1207; 0 i e t a I. , Bio/Techniques (1 9 86) 4:21 4; U.S. Patent No. 5,225,539; Jones e t a I., Nature (1 986) 321:552-525; Verhoeyan et a I., Science (1 988) 239:1 534;及 Beidler et al., J Immunol (1 988) 1 41:4053-4 0 60 〇 完全之人類抗體尤其是適合用於治療人類病患。該抗 體係使用不能表現內生性免疫球蛋白重及輕鏈基因,但可 表現人類重及輕鏈基因之導入外來基因的老鼠進行製作。 將導入外來基因的老鼠用選擇的抗原(例如所有或部分之 GAVE8)以正常的方法進行免疫。使用習見的融合瘤技藝可 得到直接對抗抗原的單株抗體。於B細胞分化期間,人類 免疫球蛋白導入基因可經重組進入導入外來基因的老鼠, 接著進行類別轉換及體染色體的突變。因此,可使用該抗 原決定部位(例如抑制GAVE8活性之抗體)加以確認。非人 類抗體之重鏈及輕鏈已被選殖並用以創造噬菌體展示之 Fab斷片。例如’重鏈基因可選殖入質體載體而使重鏈可 分泌自細菌。輕鏈基因可選殖入噬菌體披覆蛋白質基因, 而使輕鏈可表現於噬菌體之表面。使用融合人類輕鏈之噬 园體群(隨機收集體)感染表現非人類重鍵之細菌。產生的後 代噬菌體可展示雜種抗體(人類輕鏈/非人類重鏈)。使用選 擇性的抗原淘洗篩選可結合選擇性抗原的噬菌體。經數次 之選擇後可確認該噬菌體。接著,將結合選擇抗原的人類 (請先閱讀背面之注意事項再填寫本頁) 0, 裝· 訂 f 本纸張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -37 - χ25〇2〇9 Α7 Β7 五、發明説明(35) (請先閱讀背面之注意事項再填寫本頁) 輕鏈基因分離自選擇的噬菌體。然後此類選擇的人類輕鏈 基因可用以選擇人類之重鏈基因。其係將選擇的人類輕鏈 基因插入細菌表現載體。將表現選擇的人類輕鏈之細菌感 染融合人類重鏈之噬菌體群。產生的後代噬菌體可顯示人 類抗體(人類輕鏈/人類重鏈)。 接著,使用選擇的抗原淘洗篩選結合選擇抗原的噬菌 體。此步驟選擇的噬菌體(顯示完整地人類抗體)確認之抗原 決定部位與原始的選擇性非人類單株抗體相同。分離編碼 重鏈及輕鏈之基因並可進一步的操作產生人類抗體。該技 藝描述於 Jespers et al.( Bio/Technology (1 994) 12:899-903) 〇 可用標準技藝(例如親和層析法或免疫沈澱)以抗_ GAVE8抗體(例如單株抗體)分離GAVE8。抗-GAVE8抗體 可增進細胞之天然的GAVE8及宿主細胞表現製作的重組型 GAVE8之純化。此外,抗-GAVE8抗體可用以偵測GAVE8 經濟部智慧財產局員工消費合作社印製 蛋白質(例如細胞的溶解液或細胞上淸液),以評估G A V E 8 蛋白質表現之生物豐度及模式。抗-GAVE8抗體可用在診斷 上監視組織中蛋白質之含量,其爲臨床測試程序的一部分 ’例如測定一個治療療程之功效。將抗體偶合至可偵測的 物質上可促進偵測。可偵測物質的實施例包括:各種酵素 、輔基、螢光材料、發冷光的材料、生物冷光材料及放射 性物質。適當酵素的實施例,包括:辣根過氧化酶、鹼性 磷醋酶、半?L糖甘酶或乙醯膽驗醋酶;適當的輔基複合物 之貫施例,包括·抗生蛋白鏈菌素/生物素以及卵白素/生物 本紙張尺度適用中國國家摞準(CNS ) A4規格(2j〇X29^i7---- -38- 1250209 Α7 Β7 五、發明説明(30> 素;適當的螢光材料之實施例包括··傘形花內酯、螢光素 、螢光素異硫氰酸酯、若丹明、二氯三晾基胺螢光素、丹 思(dansyl)氯、給定的螢光蛋白質或藻紅蛋白;發冷光的材 料之實施例包括露明諾;生物冷光材料之實施例包括:虫 螢光素酶、蟲螢光素以及水母發光蛋白,適當的放射性物 質之實施例包括1251、1311、35S或3H。 111.重組型表現載體以及宿主細胞 本發明另一特色係關於載體,較佳者爲內含編碼 GAVE8核酸(或其部分)之表現載體。本文術語之”載體”意 指能運送另一個已聯結的核酸之核酸分子。載體類型之一 是n質體",其爲可連結額外DNA斷片的圓形雙股之環形 DNA。另一類型之載體是病毒性的載體,其中額外的DNA 斷片可連結至病毒基因體。某些載體(例如具有細菌複製起 始點的細菌載體及基因附體的哺乳動物載體)能在引入彼之 宿主細胞中自主的複製。其它載體(例如非基因附體的哺乳 動物載體)在引入宿主細胞後可插入宿主細胞之基因組,從 而隨者宿主基因組一起複製。此外,某些載體(表現載體)係 操作性地聯結,能直接地表現基因。一般而言,用於重組 D N A技藝之表現載體經常爲質體(載體)的形式。然而,本 發明包括其它形式之表現載體,例如功能適用的病毒性載 體(例如:有複製缺陷的反轉錄病毒、腺病毒及腺病毒相關 的病毒)。 本發明之重組型表現載體爲適於在宿主細胞內表現本 本紙張尺度適用中國國家標準(CNS ) A4規格(210Χ 29Τ^"ϊ ' ---- -39- (請先閱讀背面之注意事項再填寫本頁) 裝· 訂 經濟部智慧財產局員工消費合作社印製 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(37) 發明核酸之形式。因此重組型表現載體包括一個或多個調 控的序列(視用於表現之宿主細胞而定),其可操作性聯結於 表現的核酸。在重組型表現載體中,”操作地聯結"係指將重 要的核苷酸序列以允許表現核苷酸序列之方式(例如:活體 內轉錄/轉譯作用系統或引入載體之宿主細胞)聯結於調控的 序列。本文術語之"調控的序列"包括啓動子、增強子以及其 它表現控制元件(例如:聚腺苷酸化作用信號)。該調控的序 歹ij 描述方令例如:Goeddel, Gene Expression Technology: Methods in Enzymology Vo 1. 185, Academic Press, San Diego,CA (1 990)。調控的序列包括在許多類型之宿主細胞 中可直接組成性的表現之核苷酸序列(例如組織專一的調控 序列)。熟悉此技藝的專業人士均認知設計表現載體之取決 因素爲:選擇轉形的宿主細胞、所要求的蛋白質之表現水 準等。本發明之表現載體可引入宿主細胞,從而產生本文 描述之核酸編碼的蛋白質或肽類(例如:GAVE8蛋白質、突 變形式之GAVE8、融合型蛋白等)。 本發明之重組型表現載體可設計成在原核的或真核細 胞中表現GAVE8,例如:細菌的細胞,例如大腸桿菌、昆 蟲細胞(使用桿狀病毒表現載體)、酵母菌細胞或哺乳動物的 細胞。適當的宿主細胞進一步討論於G 〇 e d d e丨,s u p r a。此 外,重組型表現載體可於活體外轉錄及轉譯,例如:使用 T7啓動子調控的序列及T7聚合酶。 在原核生物中表現蛋白質,大部分是用內含控制融合 或非融合型蛋白表現之組成性或可誘發性啓動子的載體在 本纸張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) ~ 一 -40- (讀先閱讀背面之注意事項再填寫本頁) 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(38) 大腸桿菌中進行。融合載體通常在重組型蛋白質之胺基端 加上許多胺基酸之編碼。該融合載體一般之目的爲:1 )增 加重組型蛋白質表現 ;2 )增加重組型蛋白質之溶解度;以 及3)在親和性純化中作爲配體以協助重組型蛋白質純化。 融合表現載體中經常在融合部份與重組型蛋白質之間的接 合點引入蛋白質水解切除位點,純化融合型蛋白之後可從 融合部份分離重組型蛋白質。該酵素,及其同源的辨視序 列包括因子Xa、凝血酶以及腸激酶。代表性的融合表現載 體包括:pGEX(Pharmacia Biotech Inc. ; Smith et al., Gene (1988) 67:31-40)、pMAL (New England Biolabs, Beverly,MA)及 pRITS(Pharmacia,Piscataway,NJ),其係 分別融合谷胱甘肽 5-轉移酶(GST)、麥芽糖 E結合蛋白 質或蛋白質A至重組型蛋白質。 適當的可誘發性非融合大腸桿菌表現載之體實施例包 括· pTrc(Amann et al., Gene (1 988) 69:301 -31 5)¾ pET 11d (Studier et a I., Gene Expression Technology: Methods in E nzymology, Academic Press, San Diego, California (1 990) 1 85:60-89)。從 pTrc 載體表現目標基因 時’是罪佰主R N A聚合酶轉錄與t r p -丨a c融合啓動子之雜 交啓動轉錄之進行。從P E T 1 1 d載體表現目標基因時,是 靠共同表現的病毒型RNA聚合酶(T7 gnl)啓動T7 gnMac 融合啓動子進行轉錄。病毒型聚合酶可由插入λ原噬菌體 Τ7 gnl基因在lacUV 5啓動子控制轉錄下的宿主品系 BL21(DE3)或 HMS 174(DE3)供應。 (請先閱讀背面之注意事項再填寫本頁} 本紙張尺度適用中國國家標準(CMS ) A4規格(210X 297公釐) -41 - 1250209 kl B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(g 在大腸桿菌中最適化重組型蛋白質表現的策略之一是 在水解重組型蛋白質的能力損害的宿主細菌中表現蛋白質 (Gottesman,Gene Expression Technology: Methods in Enzy mology, Academic Press, San Diego, California (1 990) 1 85: 1 1 9-1 28)。另一策略是改變插入表現載體的核 酸之核酸序列,而使各胺基酸之密碼子是大腸桿菌優先利 用之密碼子(Wads et a I., Nucleic Acids Res (1 992) 212111-2118)。本發明該核酸序列之改變可用標準 DNA 合成技藝進行。 另一具體實施例之一中,GAVE8之表現載體是酵母菌 表現載體。在釀酒酵母菌中表現之載體實施例,包括·· pYepsecl(Baldari et al., EMBO J( 1 987)6 : 229-234)、 pMFa(Kurjan et al., Cell(1 982)30 : 933-943)、 pJRY88(Schultz et al., Gene(1 987)54 : 113-123)、 pYES2(lnvitrogen Corporation, San Diego, C A)、及 pPicZ(lnvitrogen Corp, San Diego, CA) 〇 此外,可使用桿狀病毒表現載體在昆蟲細胞中表現 GAVE8。在培養的昆蟲細胞(例如Sf9細胞)中表現蛋白質 之桿狀病毒載體包括:pAc系列(Smith et al.,Mol Cell Biol (1 983) 3:2 1 56-21 65)以及 pVL 系列(Lucklow et al·, Virology (1 989) 1 70:31 -39卜另一具體實施例中,可使用哺乳動物的表現載體在哺 乳動物的細胞中表現本發明之核酸。哺乳動物的表現載體 實方洹例,包 ί.舌:pC DM8 (Seed, Nature (1 987) 329:840)及 I--------ί ^-- (讀先閱讀背面之注意事項再填寫本頁) "口 本紙張尺度適用中.國國家標準(CNS ) A4規格(2IOX 297公釐) -42 - 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(4C) pMT2PC (Kaufman et al., EMBO J (1 987) 6: 1 87-1 95。當 使用哺乳動物的細胞時,經常使用控制表現載體功能之病 毒性的調控元。例如,通常使用之啓動子係源自:多瘤、 腺病毒 2、巨細胞病毒以及猴子病毒40。其它原核的及 真核細胞的適當表現系統可參閱Sam brook et al·, supra之 第16及17章。 另一具體實施例,重組型哺乳動物的表現載體能優先 地在特定的細胞類型直接進行核酸表現(例如用於表現核酸 之組織專一的調控元)。組織專一的調控元是技藝上已知的 技藝。適當的組織專一的啓動子非限制的實施例,包括: 白蛋白啓動子(具肝專一性);Pinkert et al·,Genes Dev (1 987) 1:268-277)、淋巴專一的啓動子(Calame et al., Adv Immunol (1 988) 43:235-275),尤其是 T 細胞受體啓 動子(Winoto et al.,EMBO J (1 989) 8:729-733)及免疫球 蛋白啓動子(Banerji et al., Cell (1 983) 33:729-740; Queen et al., Cell (1 983) 33: 741-748)、神經元專一的啓 動子(例如神經絲狀體啓動子;Byme et al.,Proc Natl Acad Sci USA(1989)86: 5473-5477)、胰臟專一的啓動子 (Edlund et al.,Science(1 985) 230·· 912-916)及乳腺專一 的啓動子(例如:牛奶乳淸啓動子;美國專利第4,8 7 3,3 1 6 號以及歐洲申請案公布號碼264,1 66)。亦可包含調控發生 之啓動子,例如··鼠科動物之hox啓動子(Kessel et al·, Science( 1 990)249 : 374-379)及 α _胎蛋白啓動子(Campes et al.,Genes Dev (1 989) 3:537-54)。 (請先閱讀背面之注意事項再填寫本頁) •裝· 訂 本紙張尺度適用中國國家標準(CNS ) A4规格(2】0X 297公釐) -43- 1250209 A7 ___B7 五、發明説明( (請先閲讀背面之注意事項再填寫本頁) 本發明進一步的提供包含反股方向選殖入本發明DN A 分子之重組型表現載體。即以允許表現(轉錄D ΝΑ分子 )GAVE8傳訊RNA反股的RNA分子的方式操作性聯結於調 控序列的D N A分子。在各種細胞類型中可以反股方向與核 酸操作地聯結表現反股R N A分子之調控的序列爲,例如: 病毒性啓動子及/或增強子,或可選擇直接地組成性、組織 專一性或細胞類型專一性的表現反股R N A的調控序列。反 股表現載體可爲重組型質體、噬菌質體或衰減病毒的形式 ’其中反股核酸之製作受高效率調控區域的控制,細胞引 入載體後可測定其活性。使用反義基因調節基因表現之討 論可參閱 Weintraub et al.( Re views-T rends in Genetics, Vol. 1 (1 )1 986。 經濟部智慧財產局員工消費合作社印製 本發明另一特色係關於已引入本發明重組型表現載體 之宿主細胞。本文術語之”宿主細胞”以及"重組型宿主細胞·· 可相互通用。據瞭解該術語不僅是指特定的細胞,但亦是 該細胞後代或可能的後代。由於突變或環境的影響力,某 些修飾可發生在後代,事實上該後代可能與母體細胞不相 同,但仍包含本文術語之範圍內。 宿主細胞可爲任何的原核或真核細胞。例如,GAVE8 蛋白質可表現於細菌的細胞,例如:大腸桿菌、昆蟲細胞 、酵母菌或哺乳動物的細胞(例如中國倉鼠卵巢細胞(C Η 0) 或C 0 S細胞)。其它適當的宿主細胞爲那些熟悉此技藝的 專業人士所習知。載體 D Ν Α可經習見的轉形作用或轉染作 用技藝引入原核的或真核細胞。本文術語之"轉形作用"及" 本纸張尺度適用中國國家榇準(CNS ) A4規格(210X 297公釐) -44 - 1250209 A7 ____ B7 五、發明説明( 轉染作用"意指各種經確認可引入外來的核酸(例如DNA)至 宿主細胞的技藝,包括:磷酸鈣或氯化鈣共沉澱、 DEAE-右旋聚醣調節的轉染作用、轉脂作用或電穿透作用 〇 爲了穩定的轉染哺乳動物的細胞,目前已知取決於表 現載體以及使用之轉染作用技術,僅一小部份之細胞可將 外來的D N A倂入基因組。爲了確認及選擇倂入之細胞,一 般而言編碼可選擇的標識(例如抗生素抗性)之基因可隨著重 要的基因引入宿主細胞。較佳的可選擇的標識包括賦予對 藥物(例如:G4 1 8、潮黴素以及甲胺蝶呤)抗性之標識。編 碼可選擇標識的核酸可與編碼GAVE8之載體相同或爲分離 載體一起引入宿主細胞。引入核酸穩定轉染地細胞可用藥 物選擇加以確認(例如,倂入可選擇標識基因的細胞將會生 存,而其他細胞將會死亡)。 本發明之宿主細胞,例如培養之原核的或真核的宿主 細胞,可用於產生(即表現)GAVE8蛋白質《據此,本發明 進一步的提供使用本發明宿主細胞產生GAVE8蛋白質之方 法。在具體實施例之一中,該方法包含在製作G A V E 8蛋白 質之適當的培養液中培養本發明之宿主細胞(已引入編碼 G A V E 8之重組型表現載體)。另一具體實施例中,該方法進 一步的包含自培養液或宿主細胞中分離GAVE8。 本發明之宿主細胞亦可用以產生非人類之基因轉殖動 物。例如,具體實施例之一中,本發明之宿主細胞是已引 入GAVE8-編碼序列之受精的卵母細胞或胚胎的幹細胞。然 本紙張尺度適用中國國家摞準(CNS) A4規格(2)0X 297公釐) " ' 一 -45 - (請先閲讀背面之注意事項再填寫本頁) -裝·P This paper scale applies to China National Standard (CMS) A4 specification (210X297 mm) -34- Ministry of Economic Affairs Intellectual Property Office Staff Consumer Cooperative Printed 1250209 A7 __ B7 V. Invention Description (3) Yale J Biol M ed (1 9 8 1 ) 54 : 3 8 7-4 02 ). Moreover, those skilled in the art will recognize that many variations of the method can be applied. Usually, immortalized cell lines (e.g., myeloid cancer cell lines) are derived from lymphocytes of the same mammal. For example, a murine fusion tumor can use a lymphocyte of a mouse immunized with an immunogenic preparation of the present invention and an immortalized mouse cell strain (for example, a culture solution containing hypoxanthine, aminopterin, and thymine) (" Hat culture medium") a sensitive bone marrow cancer cell line). Many bone marrow cancer cell lines can be used as fusion partners according to standard techniques, for example: P3-NS1/1-Ag4-1, P3-x63-Ag8.653 Or Sp2/0-Ag14 bone marrow cancer cell line. The above bone marrow cancer cell line can be purchased from ATCC. Generally, mouse bone marrow cancer cells sensitive to HAT can be fused to mouse spleen cells using polyethylene glycol ("PEG") The fusion-derived tumor cells can be selected using Η AT broth, which kills unfused and non-productive fused bone marrow cancer cells (unfused spleen cells die for several days because they have not been transformed) Thereafter, for example, a fusion cell of a single cell strain producing the antibody of the present invention can be detected by screening a fusion culture suspension of GAVE8 using a standard enzyme-linked immunosorbent assay. In the method of secreting a fusion cell antibody, the recombinant immunoglobulin gene library (for example, an antibody phage display gene library) is screened by GAVE8, thereby isolating the immunoglobulin gene library member that binds to GAVE 8, and the individual plant can be confirmed and isolated. Anti-GAVE8 antibody. A set of phage display gene banks for production and screening is commercially available (eg Pharmacia recombinant phage antibody system, catalog number 27-9400-01; and Stratagene SurfZAP® Phage Display Kit, catalog number 24061 2 Bu (please read the note on the back and fill in this page) This paper scale applies to China National Standard (CNS) A4 specification (210X297 mm) -35- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printed five Description of the Invention (3$ In addition, examples of methods and reagents that are particularly applicable to the production and screening of antibody display gene banks can be found, for example, in U.S. Patent No. 5,223,409; PCT Publication No. WO 92/1 861 9; PCT Publication No. W0 91/1 7271 ; PCT publication number WO92/20791 ; PCT publication number W0 92/1 5679 ; PCT publication number W0 93/01 288 ; PCT Cloth number W092/01 047; PCT publication number W092/09690; PCT publication number W0 90/02809; Fuchs et a I., B io/Technology (1991) 9:1 370-1 372; Hay eta I., Hum Anti Bod Hybridomas (1 992) 3:81 -85; Huse et a I., Science (1 989) 246:1 275-1281; and Griffiths et al., EMBO J (1 993) 25 1 2:725-734 c In addition, recombinant anti-GAVE8 antibodies (e.g., chimeric and humanized monoclonal antibodies) comprising human and non-human portions can be made using standard recombinant DNA techniques, and are within the scope of the invention. The chimeric and humanized monoclonal antibodies can be made using recombinant DNA techniques known in the art, for example, as described in PCT Publication No. WO 87/0267 1; European Patent Application No. 1 84,1 87; European Patent Application No. 1 71,496; European Patent Application No. 1 73,494; PCT Publication No. WO 86/01 533; US Patent No. 4,81 6,567; European Patent Application No. 1 25,023; Better et a I., Science ( 1988) 240: 1041-1043; Liu et a I., Proc Natl Acad Sci USA (1987) 84 · 3439-3443; Lin et a I., J Immunol (1 987) 1 39:3521 -3526; Sun et a I., Proc Natl Acad Sci USA (1 987) 84:214-21 8; Nishimura eta i., Cane Res (1 987) 47:999-1 005; Wood et al., Nature (please read the back) Note: Please fill in this page again) ip Packing · Book size is applicable to China National Standard (CNS) Α4 size (210X297 mm) -36- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention description ( 3) (1985) 314:446-449; Shaw et a I., J Natl Cancer Inst (1988) 80:1 553-1559; Morrison, Science (1 985) 229:1202-1207; Ieta I. , Bio/Techniques (1 9 86) 4:21 4; US Patent No. 5,225,539; Jones eta I., Nature (1 986) 321:552-525; Verhoeyan et a I., Science (1 988) 239:1 534; and Beidler et al., J Immunol (1 988) 1 41:4053-4 0 60 〇 Complete human antibodies are especially suitable for the treatment of human patients. This anti-system was produced using a mouse that does not express endogenous immunoglobulin heavy and light chain genes, but which can express foreign heavy and light chain genes and introduce foreign genes. Mice that are introduced with a foreign gene are immunized in a normal manner with a selected antigen (for example, all or part of GAVE8). Monoclonal antibodies directed against the antigen can be obtained using the fusion fusion technique of the prior art. During B cell differentiation, the human immunoglobulin-introduced gene can be recombined into a mouse into which a foreign gene is introduced, followed by class switching and mutation of a somatic chromosome. Therefore, it can be confirmed using the antigen-determining site (e.g., an antibody that inhibits GAVE8 activity). The heavy and light chains of non-human antibodies have been cloned and used to create phage-displayed Fab fragments. For example, the heavy chain gene can be optionally ligated into a plastid vector such that the heavy chain can be secreted from the bacterium. The light chain gene can optionally be introduced into the phage coat protein gene, and the light chain can be expressed on the surface of the phage. Bacterial flora (random collection) fused to the human light chain is used to infect bacteria that exhibit non-human heavy bonds. The resulting phage can display hybrid antibodies (human light chain/non-human heavy chain). Phages that bind to selective antigens are screened using a selective antigen panning. The phage can be confirmed after several selections. Next, the humans who select the antigen will be combined (please read the notes on the back and fill out this page). 0, Packing and binding f The paper size applies to the Chinese National Standard (CNS) A4 specification (210X 297 mm) -37 - χ25 〇2〇9 Α7 Β7 V. Description of the invention (35) (Please read the notes on the back and fill out this page) The light chain gene is isolated from the selected phage. Such selected human light chain genes can then be used to select human heavy chain genes. It inserts the selected human light chain gene into a bacterial expression vector. Bacteria expressing the selected human light chain are infected with a phage population that is fused to the human heavy chain. The resulting progeny phage can display human antibodies (human light chain/human heavy chain). Next, the phage that binds to the selected antigen is screened using the selected antigen panning. The phage selected at this step (showing intact human antibodies) confirmed the same epitope as the original selective non-human monoclonal antibody. The genes encoding the heavy and light chains are isolated and can be further manipulated to produce human antibodies. This technique is described in Jespers et al. (Bio/Technology (1 994) 12: 899-903). GAVE8 can be isolated by anti-GAVE8 antibodies (e.g., monoclonal antibodies) using standard techniques (e.g., affinity chromatography or immunoprecipitation). The anti-GAVE8 antibody enhances the purification of the recombinant GAVE8 produced by the natural GAVE8 and host cell expression of the cells. In addition, anti-GAVE8 antibodies can be used to detect proteins (such as cell lysates or cell sputum) printed by the GAVE8 Ministry of Economic Intelligence, Inc., and to assess the biological abundance and pattern of G A V E 8 protein expression. Anti-GAVE8 antibodies can be used to diagnostically monitor the amount of protein in a tissue that is part of a clinical testing procedure', e.g., to determine the efficacy of a therapeutic regimen. Coupling antibodies to detectable substances facilitates detection. Examples of detectable substances include various enzymes, prosthetic groups, fluorescent materials, luminescent materials, biological luminescent materials, and radioactive materials. Examples of suitable enzymes include: horseradish peroxidase, alkaline phosphatase, half? L-glycosidase or acetamidine test; appropriate examples of prosthetic complexes, including streptavidin/biotin and avidin/biological paper scales applicable to China National Standard (CNS) A4 Specifications (2j〇X29^i7-----38- 1250209 Α7 Β7 V. Inventive Note (30>Prime; Examples of suitable fluorescent materials include umbelliferone, luciferin, luciferin Isothiocyanate, rhodamine, dichlorotrimethylamine luciferin, dansyl chloride, a given fluorescent protein or phycoerythrin; examples of luminescent materials include Rummin; Examples of biological luminescent materials include: luciferase, luciferin, and aequorin. Examples of suitable radioactive materials include 1251, 1311, 35S, or 3H. 111. Recombinant Expression Vectors and Host Cells of the Invention Another feature relates to a vector, preferably an expression vector containing a GAVE8 nucleic acid (or a portion thereof). The term "vector" as used herein means a nucleic acid molecule capable of carrying another linked nucleic acid. One of the types of vectors is n plastid ", which can link additional DNA fragments Round double-stranded circular DNA. Another type of vector is a viral vector in which additional DNA fragments can be linked to viral genomes. Certain vectors (eg bacterial vectors and gene-containing organisms with bacterial origins of replication) The mammalian vector can replicate autonomously in the host cell into which it is introduced. Other vectors (e.g., non-gene-available mammalian vectors) can be inserted into the genome of the host cell upon introduction into the host cell, thereby replicating along with the host genome. In addition, certain vectors (expression vectors) are operatively linked to express genes directly. In general, expression vectors for recombinant DNA techniques are often in the form of plastids (vectors). However, the invention includes other forms. A performance vector, such as a functionally applicable viral vector (eg, a replication-defective retrovirus, an adenovirus, and an adenovirus-associated virus). The recombinant expression vector of the present invention is suitable for expressing a native paper scale in a host cell. Applicable to China National Standard (CNS) A4 specification (210Χ 29Τ^"ϊ ' ---- -39- (Please read the back In addition, please fill out this page. Packing · Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 5, Invention Description (37) Invented nucleic acid form. Including one or more regulatory sequences (depending on the host cell used for expression) operably linked to the nucleic acid of expression. In a recombinant expression vector, "operably linked" means an important nucleoside The acid sequence is linked to a regulated sequence in a manner that allows expression of the nucleotide sequence (eg, an in vivo transcription/translation system or a host cell into which the vector is introduced). The term "regulated sequence" includes promoters, enhancers And other performance control elements (eg, polyadenylation signals). The sequence of this regulation 描述 ij describes the order such as: Goeddel, Gene Expression Technology: Methods in Enzymology Vo 1. 185, Academic Press, San Diego, CA (1 990). Regulatory sequences include nucleotide sequences that are directly constitutive in many types of host cells (e.g., tissue-specific regulatory sequences). Professionals familiar with this skill are aware of the factors that characterize the design performance carrier: the choice of the transformed host cell, the level of performance of the desired protein, and the like. The expression vector of the present invention can be introduced into a host cell to produce a protein or peptide encoded by the nucleic acid described herein (e.g., GAVE8 protein, mutant form of GAVE8, fusion protein, etc.). The recombinant expression vector of the present invention can be designed to express GAVE8 in prokaryotic or eukaryotic cells, for example, bacterial cells such as Escherichia coli, insect cells (using a baculovirus expression vector), yeast cells or mammalian cells. . Suitable host cells are further discussed in G 〇 e d d e丨, s u p r a. In addition, recombinant expression vectors can be transcribed and translated in vitro, for example, using the T7 promoter-regulated sequence and T7 polymerase. Proteins expressed in prokaryotes, mostly using a constitutive or inducible promoter containing a control for fusion or non-fusion proteins, are applicable to the Chinese National Standard (CNS) A4 specification (210X297 mm) on this paper scale. ) ~ -40- (Read the first note on the back and fill out this page) 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention instructions (38) E. coli. The fusion vector is typically encoded by a number of amino acids at the amine end of the recombinant protein. The general purpose of the fusion vector is to: 1) increase the expression of the recombinant protein; 2) increase the solubility of the recombinant protein; and 3) act as a ligand in the affinity purification to assist in the purification of the recombinant protein. In the fusion expression vector, a proteolytic excision site is often introduced at the junction between the fusion portion and the recombinant protein, and the recombinant protein can be isolated from the fusion portion after purification of the fusion protein. The enzyme, and its homologous sequence of recognition, includes Factor Xa, thrombin, and enterokinase. Representative fusion expression vectors include: pGEX (Pharmacia Biotech Inc.; Smith et al., Gene (1988) 67: 31-40), pMAL (New England Biolabs, Beverly, MA) and pRITS (Pharmacia, Piscataway, NJ). It is a fusion of glutathione 5-transferase (GST), maltose E-binding protein or protein A to recombinant protein, respectively. Examples of suitable inducible non-fusion E. coli manifestations include: pTrc (Amann et al., Gene (1 988) 69:301 -31 5) 3⁄4 pET 11d (Studier et a I., Gene Expression Technology: Methods in E nzymology, Academic Press, San Diego, California (1 990) 1 85:60-89). When the target gene is expressed from the pTrc vector, it is the initiation of transcription of the sin-primary R N A polymerase transcription and the t r p -丨a c fusion promoter. When the target gene is expressed from the P E T 1 1 d vector, the T7 gnMac fusion promoter is transcribed by a co-presented viral RNA polymerase (T7 gnl). The viral polymerase can be supplied by the host strain BL21 (DE3) or HMS 174 (DE3) inserted under the lacUV 5 promoter-controlled transcription of the λ spp phage Τ7 gnl gene. (Please read the notes on the back and fill out this page.) This paper scale applies to China National Standard (CMS) A4 specification (210X 297 mm) -41 - 1250209 kl B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention Description (g) One of the strategies for optimizing the expression of recombinant proteins in E. coli is to express proteins in host bacteria that impair the ability to hydrolyze recombinant proteins (Gottesman, Gene Expression Technology: Methods in Enzy mology, Academic Press, San Diego, California (1 990) 1 85: 1 1 9-1 28). Another strategy is to change the nucleic acid sequence of the nucleic acid inserted into the expression vector, so that the codons of each amino acid are codons that are preferentially utilized by E. coli (Wads et a I., Nucleic Acids Res (1 992) 212111-2118). The alteration of the nucleic acid sequence of the present invention can be carried out by standard DNA synthesis techniques. In another embodiment, the expression vector of GAVE8 is a yeast expression vector. Examples of vectors for expression in Saccharomyces cerevisiae include: · pYepsecl (Baldari et al., EMBO J (1 987) 6: 229-234), pMFa (Kurjan et al., Cell (1 982) 30 933-943), pJRY88 (Schultz et al., Gene (1 987) 54: 113-123), pYES2 (lnvitrogen Corporation, San Diego, CA), and pPicZ (lnvitrogen Corp, San Diego, CA) GAVE8 is expressed in insect cells using a baculovirus expression vector. Baculovirus vectors expressing proteins in cultured insect cells (eg, Sf9 cells) include: pAc series (Smith et al., Mol Cell Biol (1 983) 3: 2 1 56-21 65) and the pVL series (Lucklow et al., Virology (1 989) 1 70: 31-39. In another specific embodiment, mammalian expression vectors can be used to express the expression in mammalian cells. Nucleic acid of the invention. Examples of mammalian expression vectors, including: pC DM8 (Seed, Nature (1 987) 329: 840) and I-------- ί ^-- (read first Read the notes on the back and fill out this page.) "The standard of the paper size is applicable. National Standard (CNS) A4 Specification (2IOX 297 mm) -42 - 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed Five , Invention Description (4C) pMT2PC (Kaufman et al., EMBO J (1 987) 6: 1 87-1 95. When mammalian cells are used, regulatory elements that control the pathogenesis of the function of the vector are often used. For example, commonly used promoters are derived from: polyoma, adenovirus 2, cytomegalovirus, and monkey virus 40. Suitable profiling systems for other prokaryotic and eukaryotic cells can be found in Chapters 16 and 17 of Sam Brook et al., supra. In another embodiment, a recombinant mammalian expression vector can preferentially perform nucleic acid expression directly on a particular cell type (e.g., a tissue-specific regulatory element for expressing a nucleic acid). Organizing a specific regulatory element is a skill known in the art. Non-limiting examples of appropriate tissue-specific promoters include: albumin promoter (with liver specificity); Pinkert et al., Genes Dev (1 987) 1:268-277), lymphoid-specific promoter ( Calame et al., Adv Immunol (1 988) 43:235-275), in particular the T cell receptor promoter (Winoto et al., EMBO J (1 989) 8: 729-733) and immunoglobulin promoters (Banerji et al., Cell (1 983) 33: 729-740; Queen et al., Cell (1 983) 33: 741-748), a neuron-specific promoter (eg neurofilament promoter; Byme) Et al., Proc Natl Acad Sci USA (1989) 86: 5473-5477), a pancreatic-specific promoter (Edlund et al., Science (1 985) 230·912-916) and a breast-specific promoter ( For example: milk chyle promoter; US Patent No. 4, 8 7 3, 3 16 and European Application Publication No. 264, 1 66). It may also contain a promoter that regulates development, such as the mux promoter of the murine (Kessel et al., Science (1 990) 249: 374-379) and the alpha-fetoprotein promoter (Campes et al., Genes). Dev (1 989) 3:537-54). (Please read the precautions on the back and fill out this page) • Loading and setting the paper size for the Chinese National Standard (CNS) A4 specification (2) 0X 297 mm) -43- 1250209 A7 ___B7 V. Invention description ( (please The invention of the present invention further provides a recombinant expression vector comprising a DN A molecule of the present invention comprising a counter-stranding direction, that is, to allow expression (transcription of D ΝΑ molecules) GAVE8 signaling RNA anti-strand The RNA molecule is operatively linked to the DNA molecule of the regulatory sequence. In various cell types, the sequence that can be operably linked to the nucleic acid in the anti-strand direction to express the regulation of the anti-strand RNA molecule is, for example: a viral promoter and/or enhancer Alternatively, a direct or constitutive, tissue-specific or cell type-specific expression of the anti-strand RNA may be selected. The anti-strand expression vector may be in the form of recombinant plastid, phage or attenuating virus. The production of nucleic acids is controlled by highly efficient regulatory regions, and the activity can be measured after the cells are introduced into the vector. For discussion of the use of antisense genes to regulate gene expression, see Weintraub et a l.( Re views-T rends in Genetics, Vol. 1 (1 ) 1 986. Printed by the Ministry of Economic Affairs, Intellectual Property Office, Staff Consumer Cooperatives Another feature of the present invention relates to host cells into which the recombinant expression vector of the present invention has been introduced. The terms "host cell" and "recombinant host cell" are mutually versatile. It is understood that the term refers not only to a particular cell, but also to the progeny or progeny of the cell. Due to mutation or environmental influence, Some modifications may occur in the offspring, in fact the progeny may be different from the parent cell, but still fall within the scope of the term. The host cell may be any prokaryotic or eukaryotic cell. For example, the GAVE8 protein may be expressed in the cells of the bacteria, For example: E. coli, insect cells, yeast or mammalian cells (e.g., Chinese hamster ovary cells (C Η 0) or C 0 S cells). Other suitable host cells are known to those skilled in the art. The vector D Ν 引入 can be introduced into prokaryotic or eukaryotic cells by the conventional transformation or transfection technique. The term "transformation" "&&q Uot; This paper scale applies to China National Standard (CNS) A4 specification (210X 297 mm) -44 - 1250209 A7 ____ B7 V. Invention Description (Transfection effect) means various nucleic acids that have been confirmed to be introduced into foreign countries ( Techniques such as DNA) to host cells include: calcium phosphate or calcium chloride co-precipitation, DEAE-dextran-mediated transfection, lipofection or electroporation, for stable transfection of mammalian cells It is currently known that depending on the performance vector and the transfection technique used, only a small fraction of the cells can invade the foreign DNA into the genome. To identify and select invading cells, genes encoding alternative markers (e.g., antibiotic resistance) can be introduced into host cells with important genes. Preferred selectable markers include markers that confer resistance to drugs (e.g., G4 18, hygromycin, and methotrexate). The nucleic acid encoding the selectable marker can be introduced into the host cell either as the vector encoding GAVE8 or as an isolated vector. Cells that are stably transfected with the introduced nucleic acid can be identified by drug selection (for example, cells that enter the selectable marker gene will survive and other cells will die). A host cell of the invention, e.g., a cultured prokaryotic or eukaryotic host cell, can be used to produce (i.e., express) a GAVE8 protein. Accordingly, the present invention further provides a method of producing a GAVE8 protein using the host cell of the present invention. In one embodiment, the method comprises culturing a host cell of the invention in a suitable culture medium in which the G A V E 8 protein is produced (a recombinant expression vector encoding G A V E 8 has been introduced). In another embodiment, the method further comprises isolating GAVE8 from the culture broth or host cell. Host cells of the invention can also be used to produce non-human gene transgenic animals. For example, in one of the specific embodiments, the host cell of the present invention is a stem cell of a fertilized oocyte or embryo that has been introduced into the GAVE8-encoding sequence. However, the paper size is applicable to China National Standard (CNS) A4 specification (2) 0X 297 mm) " ' One-45 - (Please read the note on the back and fill in this page) - Install·
P 經濟部智慧財產局員工消費合作社印製 1250209 A7 B7 經濟部智慧財產局8工消費合作社印製 五、發明説明( 後可用該宿主細胞創造基因組引入外生性GAVE8序列之非 人類基因轉殖動物或已改變內生性GAVE8序列之同源重組 型動物。該動物可用於硏究GAVE8之功能及/或活性及確 認及/或評估GAVE8活性之調節劑。本文之"導入外來基因 的動物"較佳者爲哺乳動物,更佳者爲齧齒動物,例如大白 鼠或小鼠,其中該動物之一種或多種細胞包括導入基因。 基因轉殖動物之其它實施例,包括:非人類靈長類、羊 、 狗 '牛、山羊、雞、兩棲動物等。導入基因是在細胞基因 組插入外生性DNA,發育成導入外來基因的動物並在成熟 的動物中保持此基因組,從而在導入外來基因動物的一種 或多種細胞類型或組織中直接表現編碼之基因產物。本文 之"同源的重組型動物”較佳者爲哺乳動物,更佳者爲老鼠 ’其中內生性GAVE8基因經內生性基因與引入動物細胞( 例如在發生成動物之前的動物胚胎細胞)之外生性DNA分子 間之同源重組作用加以改變。 引入編碼GAVE8之核酸至受精的卵母細胞之雄性前細 胞核(例如:經顯微注射、反病毒感染),並允許卵母細胞在 僞懷孕的雌性養育動物中進行發生,可創造本發明導入外 來基因的動物。GAVE8之互補DNA序列(例如序列確認號 碼:1 )可作爲導入基因引入非人類動物之基因組。此外, 基於與人類GAVE8互補DNA雜交之特性,可分離人類 GAVE8基因之非人類同系物(例如小鼠之GAVE8基因)作爲 導入基因。導入基因中亦可包括內子的序列以及聚腺苷酸 化作用信號,以增加導入基因表現之效率。組織專一的調 •裝-- (請先閱讀背面之注意事項再填寫本頁) 訂 本紙張尺度適用中國國家標準(CNS ) Α4規格(2!0Χ 297公釐) -46 - 1250209 A7 B7 經濟部智慈財產局員工消費合作社印製 五、發明説明( 控的序列可操作性聯結於GAVE8導入基因,以在特定的細 胞中直接地表現GAVE8蛋白質。經胚胎操作及顯微注射產 生基因轉殖動物(尤其是動物,例如小鼠)之方法是習見的技 藝,描述於例如:美國專利第4,7 3 6,8 6 6以及4,8 7 0,0 0 9 號、美國專利第 4,873,191 號以及 Hogan, Manipulating the Mouse Embryo, (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N. Y., 1986)。可用相似的方法 產生其它之基因轉殖動物。然後可用導入外來基因的起始 建基動物培育攜帶額外的導入基因之動物。此外,攜帶編 碼GAVE8導入基因之基因轉殖動物可進一步的與攜帶其它 導入基因之其它基因轉殖動物交配。 爲了創造同源的重組型動物,可製備含有至少一部分 之G A V E 8基因(例如··人類或非人類同質性之G A V E 8基因 ,例如鼠科動物之GAVE8基因)經引入刪除、添加入或取 代,從而改變GAVE8基因(例如破壞其功能)之載體。較佳 的具體實施例中,設計同源重組作用載體時,係功能性的 中斷內生性GAVE8基因(即不再編碼功能性的蛋白質;亦 稱爲"去除基因(knock out)”動物)。此外,設計同源重組作 用載體時,係將內生性GAVE8基因突變或作其它改變但仍 保留功能性蛋白質的編碼(例如··可改變上游調控的區域, 從而改變內生性GAVE8蛋白質之表現)。在同源重組作用 之載體中,在GAX/E8基因改變的部分之5’及3’端可鄰接額 外的GAVE8基因核酸,以允許載體帶有之外生性GAVE8 基因與胚胎幹細胞的內生性G A V E 8基因之間發生同源重組 (請先閱讀背面之注意事項再填寫本頁) 本纸張尺度適用中國國家標準(CN’S ) A4規格(210X 297公釐) -47 - 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(y 作用。鄰接GAVE8之額外的核酸要有充分的長度以成功的 與內生性基因進行同源重組作用。載體包含之鄰接的 DNA( 5’及3’端)一般長度爲數個仟驗基(同源重組作用載體 之描述可參閱例如:Thomas et a 丨.,Cell (1987) 51:503)。 將載體引入胚胎幹細胞株(例如電穿透作用)並選擇引入之 GAY/E8基因與內生性GAVE8基因同源再合倂之細胞(參閱 例如:Li et a I.,Cell (1 992) 69:915)。然後將選擇的細胞 注入動物(例如老鼠)之囊胚以形成凝集嵌合體(參閱例如: Bradley in Teratocarcinomas and Embryonic Stem Cells: A Practical Approach, Robertson, ed., IR L, Oxford, (1 987) ρρ·1 1 3-152)。然後可將嵌合的胚胎植入適當的僞懷 孕的雌性養育動物並進行懷孕生產。可用生殖細.胞帶有同 • 源再合倂之 D Ν Α的後代育種產生所有動物細胞均含有同源 再合倂之 DNA的導入基因動物之後代。構築同源重組作用 載體及同源的重組型動物之方法進一步的描述於B r a d I e y, Current Opinion in Bio/Technology (1 991) 2:823-829 及 PCT 公告 W〇 90/11354、W〇 91/01140、W〇 92/0968 以 及 W〇 93/041 69。 另一具體實施例中,可製作含有允許調控導入基因表 現之選擇系統的導入外來基因的非人類動物。該系統的實 施例之一是嗤菌體P 1之c「e /1 ο X P重組酶系統。c r e /1 ο X P 重組酶系統之描述可參閱,例如:L a k s o e t a I.,P r o c N a t丨 Acad Sci USA(1992)89: 6232-6 236。另一重組酶系統之 實施例是釀酒酵母菌之FLP重組酶系統((VGorman et al., 本纸張尺度適用中國國家標準(CNS ) A4規格(2]0X 297公釐) ~ -48- (請先閲讀背面之注意事項再填寫本頁) -裝 訂P Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau 8 Workers Consumption Cooperative Printed 5, Invention Description (The host cell can be used to create a genome to introduce an exogenous GAVE8 sequence of non-human gene-transgenic animals or A homologous recombinant animal that has altered the endogenous GAVE8 sequence. The animal can be used to study the function and/or activity of GAVE8 and to confirm and/or evaluate the modulator of GAVE8 activity. "The animal that introduces the foreign gene" Preferably, the mammal is a mammal, and more preferably a rodent, such as a rat or a mouse, wherein one or more cells of the animal include an introduced gene. Other embodiments of the genetically modified animal include: non-human primates, sheep , dog 'bovine, goat, chicken, amphibian, etc.. The introduced gene is inserted into exogenous DNA in the genome of the cell, developed into an animal that introduces a foreign gene and maintains the genome in a mature animal, thereby introducing one of the foreign gene animals or The gene product encoded directly in a variety of cell types or tissues. The homologous recombinant animal Preferably, it is a mammal, and more preferably a mouse, wherein the endogenous GAVE8 gene is homologously recombined with an endogenous gene and an introduced DNA molecule (for example, an animal embryo cell before the animal is formed). Alteration. Introduction of the nucleic acid encoding GAVE8 to the male pronuclei of the fertilized oocyte (eg, microinjection, anti-viral infection) and allowing oocytes to occur in pseudopregnant female nourishment animals, may create the present invention An animal into which a foreign gene is introduced. The complementary DNA sequence of GAVE8 (for example, sequence confirmation number: 1) can be introduced into the genome of a non-human animal as an introduced gene. Further, based on the property of hybridization with human GAVE8 complementary DNA, the non-human human GAVE8 gene can be isolated. A homologue (such as the GAVE8 gene of mouse) is used as an introduced gene. The introduced gene may also include a sequence of a neutron and a polyadenylation signal to increase the efficiency of the introduced gene. Organization-specific adjustments-- Read the notes on the back and fill out this page. The standard paper size applies to the Chinese National Standard (CNS). Α4 Specifications (2!0Χ 297 mm) -46 - 1250209 A7 B7 Ministry of Economic Affairs Zhici Property Bureau Staff Consumer Cooperative Printed 5, Invention Description (Controlled sequence operability linked to GAVE8 import gene to specific cells The GAVE8 protein is directly expressed in the medium. The method of producing a genetically transgenic animal (especially an animal such as a mouse) by embryo manipulation and microinjection is a conventional technique, and is described, for example, in U.S. Patent No. 4,7 3 6,8 6 U.S. Patent No. 4,873,191 and Hogan, Manipulating the Mouse Embryo, (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1986). A similar method can be used to generate other genetically transformed animals. The animal carrying the additional introduced gene can then be bred with the starting base animal into which the foreign gene is introduced. In addition, gene-transforming animals carrying the GAVE8-introduced gene can be further mated with other gene-transforming animals carrying other introduced genes. To create a homologous recombinant animal, a GAVE 8 gene (eg, a human or non-human homologous GAVE 8 gene, such as the GAVE8 gene of a murine) can be prepared for deletion, addition or substitution. Thus, the vector of the GAVE8 gene (for example, disrupting its function) is altered. In a preferred embodiment, when a homologous recombination vector is designed, it functionally disrupts the endogenous GAVE8 gene (i.e., no longer encodes a functional protein; also known as "knock out" animals). In addition, when the homologous recombination vector is designed, the endogenous GAVE8 gene is mutated or otherwise altered but the expression of the functional protein is retained (for example, the upstream regulatory region can be altered to alter the expression of the endogenous GAVE8 protein). In the vector of homologous recombination, the additional GAVE8 gene nucleic acid can be contiguous at the 5' and 3' ends of the GAX/E8 gene-changing portion to allow the vector to carry the endogenous GAVE8 gene and the endogenous GAVE 8 of the embryonic stem cell. Homologous recombination between genes (please read the notes on the back and fill out this page) This paper scale applies to the Chinese National Standard (CN'S) A4 specification (210X 297 mm) -47 - 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Employee consumption cooperatives printed five, invention instructions (y role. Additional nucleic acids adjacent to GAVE8 should be of sufficient length to successfully carry out with endogenous genes Homologous recombination. The vector contains contiguous DNA (5' and 3' ends) which are generally several lengths. For a description of homologous recombination vectors, see, for example, Thomas et al., Cell (1987) 51 : 503). Introduce the vector into an embryonic stem cell line (for example, electroporation) and select the cell into which the introduced GAY/E8 gene is homologously recombined with the endogenous GAVE8 gene (see, for example, Li et a I., Cell (1). 992) 69:915). The selected cells are then injected into the blastocyst of an animal (eg, a mouse) to form an agglutination chimera (see, for example, Bradley in Teratocarcinomas and Embryonic Stem Cells: A Practical Approach, Robertson, ed., IR L, Oxford, (1 987) ρρ·1 1 3-152). The chimeric embryos can then be implanted into appropriate pseudo-pregnant female fostering animals for pregnancy production. Available reproductive fine cells with the same source and source recombination The progeny breeding of D Ν 产生 produces the introduced animal progeny of all animal cells containing homologous recombination DNA. Methods for constructing homologous recombination vectors and homologous recombinant animals are further described in Brad I ey , Current Op Inion in Bio/Technology (1 991) 2:823-829 and PCT Bulletin W〇 90/11354, W〇 91/01140, W〇 92/0968 and W〇 93/041 69. In another embodiment, a non-human animal containing a foreign gene introduced to allow selection of a system for regulating the expression of the introduced gene can be made. One of the examples of the system is the c"c /1 ο XP recombinase system of the bacterium P 1 . The description of the cre /1 ο XP recombinase system can be found, for example: La aksoeta I., P roc N at丨Acad Sci USA (1992) 89: 6232-6 236. Another example of a recombinant enzyme system is the FLP recombinase system of Saccharomyces cerevisiae ((VGorman et al., this paper scale applies to the Chinese National Standard (CNS) A4 specification). (2]0X 297 mm) ~ -48- (Please read the note on the back and fill out this page) - Binding
P 1250209 經濟部智慧財產局員工消費合作社印製 A7 _ B7___五、發明説明( Science (1991) 251:1351-1355)。若用 c「e/loxP 重組酶系 統調控導入基因之表現,導入基因的動物可內含編碼c「e 重組酶及選擇的蛋白質。例如經交配內含編碼選擇蛋白質 的導入基因與內含編碼重組酶之導入基因的二種基因轉殖 動物後可構築得到"雙”基因轉殖動物。 亦可依據描述於 Wilmut et al·, Nature (1 997)385:81 0-81 3 及 PCT 公告 WO 97/07668 以及 WO 97/0 7669之方法製作在此描述之非人類基因轉殖動物的純 系。簡言之,分離導入外來基因的動物之細胞(例如體細胞) ,誘發彼脫離生長週期並進入G〇相。然後將此非活動性的 細胞與分離自和非活動性細胞同種動物之除去細胞核的卵 母細胞進行融合(例如經由使用電脈衝)。然後將再構築之卵 母細胞進行培養,發生成桑椹胚或胚細胞,然後轉移至僞 懷孕的雌性養育動物。從雌性養育動物產生的後代之細胞( 例如體細胞)中分離選殖純系。 IV.藥學組成物 本發明之GAVE 8核酸分子、GAVE8蛋白質以及抗-GAVE8抗體(在此亦稱爲”活性化合物可倂入適用於投藥 之藥學組成物。該組成物通常包含核酸分子、蛋白質或抗 體以及醫藥學上可接受的載體。本文之”醫藥學上可接受的 載體"包括與醫藥學投藥相容的任何及所有之溶劑、分散培 養液、包覆劑、抗菌性以及抗真菌的藥劑、等張劑及吸收 延緩劑等。醫藥學上活性物質使用該培養液以及藥劑爲已 ( CNS ) ( 23 0 X 297^^ ) ~~一 -49 - (請先閱讀背面之注意事項再填寫本頁) -裝 訂 P. 1250209 A7 B7 五、發明説明( (請先閲讀背面之注意事項再填寫本頁) 知的技藝。除了與活性化合物不相容的範圍之外的任何習 見的培養液或藥劑,均可考慮用於組成物。組成物中亦可 倂入補充的活性化合物。 本發明之藥學組成物可調製成與預期的投藥路徑相容 的組成物。投藥路徑之實施例包括:非經腸,例如:靜脈 內的、皮膚內的、皮下的、口服的(例如吸氣)、經皮的(塗 覆的)、經黏膜的以及直腸的投藥。作爲非經腸的、皮膚內 的或皮下的施用之溶液或懸浮液可包括下列成份:滅菌之 稀釋劑,例如··注射之水、生理食鹽水溶液、不易揮發的 油、聚乙二醇、甘油、丙二醇或其它合成的溶劑;抗菌性 藥劑’例如:苯甲醇或對氧苯甲酸甲酯;抗氧化劑,例如 :抗壞血酸或亞硫酸氫鈉;螯合劑,例如E DTA ;緩衝溶液 ,例如:乙酸鹽、檸檬酸鹽或磷酸鹽;以及調整滲透壓之 藥劑,例如:氯化鈉或右旋糖。可調整酸鹼度之酸或鹼, 例如 HCI或NaOH。非經腸的製劑可密封於安瓿、用完即 丟棄的注射器或由玻璃或塑膠製作的多重劑量管形瓶。 經濟部智慧財產局g(工消費合作社印製 適用於注射之藥學組成物可包括滅菌之水溶液(當爲水 溶性時)或分散液及可用滅菌之注射溶液或分散液即時製備 之滅菌粉末。於靜脈內的投藥時,適當的載體包括生理鹽 水、抑菌水、Cremophor E L ® ( B A S F ; Parsippany, NJ)或 磷酸鹽緩衝的生理食鹽水(PBS)。在所有的案例中,組成物 必須經過滅菌並應爲易於注射之流體。彼在製作及貯藏的 條件下必須是穩定的,且在保存下必須可對抗微生物(例如 細菌及真菌)之污染。載體可爲溶劑或分散培養液,其可內 —- ___ 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -50- 1250209 A7 B7 五、發明説明(d 含例如:水、乙醇、多元醇(例如:甘油、丙二醇、液體聚 乙:¾ (乙)二醇等)及其適當的混合物。使用塗敷劑例如卵磷 脂’當分散時可維持須要之粒度以及使用表面活性劑可維 持適當的流動性。預防微生物之作用可各種抗菌性以及抗 真菌的藥劑加以達成,例如:對氧苯甲酸、氯丁醇、酚、 抗壞血酸、局部抗菌劑等。在許多案例中較佳者在組成物 中將包括:等張的藥劑 '例如、糖、聚醇類例如甘露糖醇 、山梨糖醇、氯化鈉。組成物包括遲延吸收,例如:單硬 脂酸鋁以及明膠等藥劑可製成長期吸收之注射組成物。 製備滅菌之注射溶液可在將須要量之活性化合物(例如 :GAVE8蛋白質或抗-GAVE8抗體)倂入內含上述列舉成分 的一種或一組適當之溶劑,接著過濾滅菌。一般而言,製 備分散液係將活性化合物倂入含有鹼性的分散培養液及以 上列舉之其它成分的滅菌載劑。當製備滅菌之注射溶液的 滅菌粉末時’較佳的方法是製成真空乾燥及冷凍乾燥產生 之有效成份的粉末與來自任何額外的所要求的成分先前滅 菌過濾之溶液的粉末。 一般而言,口服組成物可包括惰性稀釋劑或可食用的 載體。彼可密封於明膠膠囊或壓製成藥片。口服投藥治療 時,活性化合物可倂入賦形劑並以藥片、喉片或膠囊的形 式使用。口服的組成物亦可使用流體載體製備,以作爲漱 口劑,其中流體載體中之化合物可口服、吸入及咳入或吞 嚥施用。 組成物中可包括醫藥學上相容的黏結劑,及/或佐劑材 本紙張尺中國國家標準(CNS ) A4規格(23 0x 297公釐) ~ " 十’ -51· (請先閲讀背面之注意事項再填寫本頁) •裝- 、11 經濟部智慧財產局員工消費合作社印製 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(d 料。藥片、藥九、膠囊、喉片及其類似者可含有下列之任 何成分,m本Μ相似的化合物:結合劑,例如:微晶粒纖 維素、特拉加康斯膠樹或明膠;賦形劑,例如:澱粉或乳 糖;崩解的藥劑,例如:藻酸、皮磨膠(Prim〇ge|)或玉米澱 粉;潤滑劑,例如:硬脂酸鎂或史多特(sterotes);滑動 ’例如·一氧化砂膠體;增甜劑,例如:蔗糖或糖精; 或調味劑,例如:薄荷、水楊酸甲酯或橙色的矯味劑。吸 氣投藥時,化合物係以氣溶膠的形式從加壓的容器或含有 適當的推進劑,例如氣體(例如二氧化碳)之分藥器、或噴 霧器噴灑運送。 亦可經黏膜或經皮的方式全身性投藥。經黏膜或經皮 的投藥時,調配物中可使用能穿過障壁之適當的穿透劑。 一般而言該穿透劑是已知技藝’包括例如經黏膜的投藥時 之兩性介面活性劑、膽鹽、及梭鏈孢酸衍生物。經黏膜的 投藥可經由使用鼻噴液或栓劑完成。經皮的投藥時活性化 合物可調製成一般技藝上已知的藥膏 '軟膏、凝膠或乳膏 〇 化合物亦可製備成栓劑的形式(例如用習見的栓劑,例 如可可油以及其它甘油酯)或滯留灌腸劑進行直腸的傳輸。 具體實施例之一中,活性化合物可與保護化合物對抗 身體快速淸除之載體共同製備,該載體爲例如控制釋放之 調配物,包括植入物及微封包的傳輸系統。可使用生物可 降解的、生物相容的聚合物於,例如:乙烯醋酸乙烯酯、 聚酐、聚乙醇酸、膠原蛋白、聚正酯類以及聚乳酸。製備 (請先閱讀背面之注意事項再填寫本頁) 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -52- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(5(^ 該調配物之方法爲熟悉此技藝的專業人士所熟知。該材料 亦可市售得自 Alza Corporation 及 Nova Pharmaceuticals, I n c。微脂粒的懸浮液(包括用病毒性抗原之單株抗體標定感 染細胞的脂球體)亦可作爲醫藥學上可接受的載體。被可依 據熟悉此技藝的專業人士習知的方法製備,例如描述於美 國專利第4,522,81 1號。 口服的或非經腸的組成物尤其是有利於形成易於投藥 及劑量均勻的劑量單位形式。本文之劑量單位形式意指由 物理上不連接的單位形成之單一劑量,內含預定量之活性 化合物的各單位可與經過計算醫藥上需要的載體產生所要 求的治療效果。不論是一種或多種分別投藥,或連續灌入 ,取決於疾病之型態及嚴重性,約1微克/公斤至15毫克/ 公斤(例如:〇· 1至20毫克/公斤)之抗體是投藥至病患起始 候選劑量。取決於上述的因素,有代表性的每日劑量介於 約1微克/公斤至1 00毫克/公斤或更多。數天或更長之重 覆投藥時,取決於症狀,治療可延長到發生抑制疾病症狀 時爲止。然而,亦可適用其它劑量給藥療程。治療的進展 可用習見的技藝輕易監測及測定。典型的投服療程揭示於 WO 94/CM188。本發明劑量單位形式之規格直接取決於活 性化合物獨特的特性及想要達成的特定治療效果,以及治 療個體對在此技藝中該活性化合物製劑與生倶來的限制。 本發明之核酸分子可插入載體並作爲基因療法之載體。基 因療法之載體可運送至患者,例如:經靜脈注射、局部的 投藥(美國專利第5,328,470號)或經立體定向的注射(參閱 (請先閱讀背面之注意事項再填寫本頁} 本紙張尺度適用中國國家標準(CNS ) A4規格(210X29?公釐) -53> 1250209 A7 B7 經濟部智慈財產局員工消費合作社印製 五、發明説明(51) 例如:Chen et al., Proc Natl Acad Sci USA( 1 994)91 : 3 0 54-30 57)。基因療法載體之醫藥學的製劑可包括基因療 法之載體與可接受的稀釋劑,或可包含包埋基因傳輸載劑 之緩釋基質。此外,由重組型細胞可製作完整的基因傳輸 載體,例如反轉錄病毒的載體,醫藥學的製劑可包括一種 或多種產生基因傳輸系統之細胞。 藥學組成物可與投藥說明共同包含於容器、剝撕式面 膜或分藥器內。 V.本發明之用途及方法 在此描述之核酸分子、蛋白質、蛋白質同系物以及抗 體可用一種或多種下列之方法進行:a)篩選測定;b)偵測測 定(例如:染色體的圖譜、組織分類、法醫的生物學);c)預 測藥物(例如··診斷的測定、預測測定、臨床的試驗以及藥 物遺傳學監測);及d)治療方法(例如治療的以及預防性的) 。與其他細胞蛋白質交互作用之G A V E 8蛋白質可用於(i)調 節細胞的增殖;(Μ )調節細胞的分化;以及(j j j)調節細胞殘 存。本發明分離的核酸分子可用以表現G A V E 8蛋白質(例 如在基因療法中於宿主細胞中經重組型表現載體進行表現) 、可用以偵測(例如生物的樣品中之)G A V E 8傳訊R N A或 GAVE8基因的基因損害、及調控GAVE8活性。此外, GAVE8蛋白質可用以篩選調控GAVE8活性或表現之藥物 或化合物與治療其特徵在於不充分的或過度的產生G A V E 8 蛋白質之病症或相較於GAVE8野生型蛋白質,GAVE8蛋 (讀先閱讀背面之注意事項再填寫本頁) 本纸張尺度適用中國國家標準(CMS ) A4規格(210>< 297公慶) -54- 1250209 A7 B7 經濟部智慈財產局員工消費合作社印製 五、發明説明( 白質活性減低或異常之病症的藥物或化合物。此外,本發 明之抗-GAVE8抗體可用以偵測以及分離GAVE8蛋白質, 並調控G AV E 8活性。本發明進一步的係關於在此描述的上 述篩選測定確認的新穎藥劑及使用彼之治療或測試。 A·篩選測定 本發明提供方法(亦稱爲"篩選測定")確認調節劑,即結 合至GAVE8蛋白質或具有刺激或抑制GAVE8蛋白質效應( 例如·· G A V E 8表現或G A V E 8活性)之候選或測試化合物或 藥劑(例如··肽類、擬肽、小分子或其它藥物)。 具體實施例之一中,本發明提供篩選結合至或調控膜 結合形式之G A V E 8蛋白質或多肽或其生物活性的部分之活 性的候選或測試化合物之測定方法。本發明之測試化合物 可得自技藝上已知的組合基因庫,包括:生物基因庫;空 間性定址的平行固相或溶相基因庫;去迥旋 (deconvolution)的合成基因庫;”一圓珠一化合物•’之基因庫 ;以及使用親和層析法進行選擇的合成基因庫。生物的基 因庫只限於肽基因庫,而其他四種基因庫則爲肽、非肽寡 聚物或小分子化合物基因庫(Lam, Anticancer Drug Des (1 997)1 2:1 45)。 合成分子基因庫之方法的實施例可參見例如:DeWitt et al., Proc Natl Acad Sci USA( 1 993)90 : 6909 ; Erb et al·, Proc Natl Acad Sci US A( 1 994)91 : 1 1 422 ; Zuckermann et al., J Med Chem(1 994)37 : 2678 ; Cho et (請先閲讀背面之注意事項再填寫本頁) -裝· 本紙張尺度適用中國國家標準(CNS ) Α4規格(2】〇Χ 297;釐) -55 - 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(53) 3 I., Science(1 993)261 : 1 3 0 3 ; Carrel I e t a I., Angew Chem Int Ed Engl(1994)33 : 2059 ; CareII et al., Angew Chem Int Ed Engl(1994)33 : 2061 ;及 Gallop et al., J Med Chem(1 994)37 : 1 233 〇 化合物基因庫可存在於溶液(例如:Η o u g h t e n, B io/Techn iques( 1 992 ) 1 3 : 4 1 2-42 1 )、或圓珠(La m,N at ure (1991) 354:82-84)、晶片(Fodor, Nature (1 993) 3 6 4:555-556)、細菌(美國專利第5,223,409號)、孢子(美國專利第 5,571,698; 5,403,4 84;以及 5,223,409 號)、質體(Cull et a I., Proc Natl Acad Sci USA(1 992)89 : 1 865-1 869)或噬菌 體(Scott et al., Science (1 990) 249 : 386-390; Devlin, Science(1990)249 : 4 0 4-406 ; C w i r I a et a I., Proc Natl Acad Sci USA(1 990)87 : 6378-6382 ;及 Felici J Mol B iol (1991)222 : 301-310卜 因爲GAVE8配體是SIP,因此可用已知的方法硏究測 定S I P與G A V E 8作用之特定的部。此特定的區域可用實行 習知的生合成方法,合倂碳水化合物合成方法及酶催化反 應合成。該SIP部分相當於”抗原決定部位”。GAVE8抗原 決定部位可使用其它單體或非碳水化合物部份修飾以產生 增強性質(例如:血淸半生期、GAVE8結合常數等)之經修 飾的抗原決定部位。任何適合的抗原決定部位變型可用本 文教示之結合及篩選測定進行測定。 具體實施例之一中,測定爲細胞測定,其中將細胞表 面表現膜-結合形式的G A V E 8蛋白質、或其生物活性的部 本紙張尺度適用中國國家標準(CNS ) A4規格(210x 297公釐) (請先閲讀背面之注意事項再填寫本頁) -裝· 、v 一口 f -56- 1250209 A7 經濟部智慧財產局員工消費合作社印製 B7五、發明説明( 分之細胞與測試化合物接觸,測定測試化合物結合至 GAVE8蛋白質之能力。細胞可爲酵母菌細胞或源自哺乳動 物的細胞。決定測試化合物結合至GAVE8蛋白質之能力, 可將測試化合物與放射性同位素或酵素的標記偶合,偵測 複合體中標記的化合物,測定測試化合物結合至G A V E 8蛋 白質或其生物活性的部分。例如,測試化合物可直接的或 間接的標記125ι、35S、14C或3H,且放射性同位素可直接 的計數放射性或計數閃爍加以偵測。此外,測試化合物可 標記酵素,例如:辣根過氧化酶、鹼性磷酯酶或虫螢光素 酶,且可用適當的受質轉化至產物偵測標記的酵素。較佳 的具體實施例之一中,該測定包含將細胞表面表現膜-結合 形式的G AV E 8蛋白質、或其生物活性的部分的細胞與習知 的結合GAVE8之化合物接觸以形成測定混合物,將測定混 合物與測試化合物接觸,並決定測試化合物與GAVE8蛋白 質交互作用之能力,其中決定測試化合物與GAVE8蛋白質 交互作用之能力包含相較於習知的化合物決定測試化合物 優先結合至GAVE8或其生物活性部分的能力。 另一具體實施例中,測定爲細胞測定,其係包含將細 胞表面表現膜-結合形式的GAVE8蛋白質、或其生物活性 部分的細胞與測試化合物接觸,決定測試化合物調控(例如 :刺激或抑制)GAVE8蛋白質或其生物活性部分的活性之能 力。決定測試化合物調控GAVE8或其生物活性部分的活性 之能力,係可用決定GAVE8蛋白質與GAVE8目標分子之 結合或交互作用之能力加以完成。本文之"目標分子"是可與 (請先閲讀背面之注意事項再填寫本頁) 裝_ 本纸張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -57- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(y GAVE8蛋白質結合或交互作用之分子,例如細胞表面表現 之G A V E 8蛋白質分子、第二個細胞表面之分子、細胞外周 圍環境的分子 '相關於細胞膜內部表面的分子或細胞質的 分子。GAVE8目標分子可爲非GAVE8分子或本發明之 GAVE8蛋白質或多肽。具體實施例中,GAVE8目標分子 爲可增進細胞外的信號(例如:經由化合物結合至膜結合的 GAVE8分子產生的信號)經由細胞膜轉導進入細胞之訊息傳 遞路徑之成份。例如目標分子可爲具有催化活性之二級細 胞間的蛋白質或爲可增進下游傳訊分子與GAVE8相聯之蛋 白質。 另一具體實施例之中,可使用已知的技藝製作G A V E 1 ,於本文教示的目標細胞中表現以進行組成地信號傳導, 參閱例如:W0 00/22131以及W0 00/22129,然後將細胞 暴露至各種候選調節劑以測定信號活性是否增強(透露其爲 候選之促效劑),或縮小(透露其爲候選之拮抗劑)、或活性 降低至基線含量以下(其爲候選之逆向促效劑)。 可用說明如上之方法直接地結合,決定GAVE8蛋白質 結合至或與GAVE8目標分子交互作用之能力。較佳的具體 實施例中,決定GAVE8蛋白質結合至或與GAVE8目標分 子交互作用之能力,可由目標分子之活性測定。例如,可 偵測目標分子誘發之細胞的二級傳訊者(例如包括(但非限於 )細胞內的Ca2+、二醯基甘油及IP3)、偵測目標分子對適當 受質的催化/活性、偵測報導基因(例如:將GAVE8反應性 的調控元件操作性聯結於編碼可偵測標識(例如虫螢光素)的 本紙張尺度i用中國國家標準(CNS ) A4規格(210X297公釐) (請先閲讀背面之注意事項再填寫本頁) -裝‘ 訂 f -58- 1250209 經濟部智慧財產局員工消費合作社印製 五、發明説明( 酶核酸)之誘發、或偵測細胞的反應(例如細胞分化或細胞增 殖)以測定目標分子活性。 另一具體實施例中,本發明之測定爲無細胞的測定, 其係包含接觸GAVE8蛋白質或其生物活性的部分與測試化 合物,決定測試化合物結合至GAVE8蛋白質或其生物活性 部分的能力。如上述的說明,可直接的或間接的測定測試 化合物結合至GAVE8蛋白質。較佳的具體實施例中,該測 定包括接觸GAVE8蛋白質或其生物活性的部分與習知的結 合GAVE8之化合物以形成測定混合物,接觸測定混合物與 測試化合物,決定測試化合物與GAVE8蛋白質交互作用之 能力,其中決定測試化合物與GAVE 8蛋白質交互作用之能 力包含相較於習知的化合物決定測試化合物優先結合至 GAVE8或其生物活性部分的能力。 另一具體實施例中,該測定爲無細胞測定,其係包含 接觸GAVE8蛋白質或其生物活性的部分與測試化合物,並 決定測試化合物調控(例如刺激或抑制)GAVE8蛋白質或其 生物活性部分的活性之能力。決定測試化合物調控GAVE8 活性之能力,可用上述說明之直接結合的方法,決定 GAX/E8蛋白質結合至GAVE8目標分子之能力加以完成。 另一具體實施例中,決定測試化合物調控GAVE8活性之能 力,可用決定GAVE8蛋白質進一步的調控GAVE8目標分 子之能力加以完成。例如目標分子對適當受質的催化/活性 可用先前描述之方法測定。 另一具體實施例中,無細胞測定包含接觸GAVE8蛋白 (請先閱讀背面之注意事項再填寫本頁) *裝· 訂 ip-· 本纸張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -59- 1250209 A7 B7 五、發明説明(57) 質或其生物活性的部分與習知的結合G A V E 8之化合物以形 成測定混合物,接觸測定混合物與測試化合物,決定測試 化合物與GAVE8蛋白質交互作用之能力,其中決定測試化 合物與GAVE8蛋白質交互作用之能力包含決定GAVE8蛋 白質優先結合至或調控GAVE8目標分子之活性的能力。 本發明之無細胞測定可使用可溶解型或膜結合型 GAVE8。當使用膜結合型GAVE8進行無細胞測定時可利用 溶解劑使膜結合型GAVE8維持在溶液狀態。該溶解劑之實 施例包括··非離子性兩性介面活性劑,例如·· η-辛基葡萄 糖苷、η-十二烷基葡萄糖苷、η-十二烷基麥牙苷、辛醯基-Ν-甲基葡萄糖胺、癸醯基-Ν-甲基葡萄糖胺、Triton Χ-100 、Triton X-1 14、Thesit®、異三癸基聚(乙烯(乙)二醇-醚)n 、3-[(3-氯醯胺基丙基)二甲基胺基]-1 -丙烷磺酸酯(CHAPS) 、3-[(3-氯醯胺基丙基)二甲基胺基】-2-羥基-1-丙烷磺酸酯 (CHAPSO)、或 N-十二烷基 -N,N-二甲基-3-銨基-1·丙烷磺 酸酯。 本發明上述測定方法中一種以上之具體實施例,可令 人滿意的固定GAVE8或目標分子,以增進複合體分離自一 種或兩種蛋白質的未複合形式,與提供自動化之測定。測 試化合物結合至GAVE8,或GAVE8與目標分子在候選化 合物存在及不存在下之交互作用,可在內含反應物之任何 適用的容器內完成。該容器之實施例包括:微量測試盤、 試管以及微離心管。在具體實施例之一中,融合型蛋白可 提供附加的結構區,可允許一種或二種蛋白質結合至基質 本纸張尺度適用中國國家標準(CNS ) A4規格(2】0X 297公釐) (讀先閱讀背面之注意事項再填寫本頁) 裝. 訂 經濟部智慧財產局員工消費合作社印製 -60 - 1250209 A7 _____ B7 五、發明説明(d (請先閲讀背面之注意事項再填寫本頁) 。例如,谷胱甘肽-S-轉移酶/GAVE8融合型蛋白或谷胱甘 月太-S-轉移酶/目標融合型蛋白,其可吸附至谷胱甘肽瓊脂糖 圓珠(Sigma Chemical, St· Louis, MO)或谷胱甘肽衍生的微 量測試盤,然後彼可合倂測試化合物或測試化合物及非吸 附的目標蛋白質或GAVE8蛋白質,混合物在進行複合體形 成之條件下反應(例如生理狀況下之鹽類及酸鹼度)。反應後 淸洗圓珠或微量測試盤孔,去除任何未結合的成份,直接 或間接的測量形成之複合體,例如用說明如上之方法。此 外’複合物可離解自基質,並可使用標準技藝測定GAVE8 結合之水準或活性。 經濟部智慧財產局員工消費合作社印紫 其它固定化蛋白質在基質上之技藝亦可用於本發明之 篩選測定。例如,GAVE8或其目標分子可利用生物素及抗 生蛋白鏈菌素之共軛作用加以固定化。生物素化的GAVE8 或目標分子可使用技藝上已知的技藝(例如生物素化組套, Pierce Chemicals, Rockford, IL)製備自生物素- NHS(N-羥 基-琥珀醯亞胺),並固定於塗覆抗生蛋白鏈菌素的96孔測 試盤(Pierce Chemicals)。此外,可與GAVE8或目標分子 反應但不干擾GAVE8蛋白質結合至目標分子的抗體,可以 共軛作用連結至平板的孔中,以用抗體捕阱孔中未結合的 目標或GAVE8。除了用說明如上之偵測GST-固定化複合 物的方法之外,亦可包括使用與GAVE8或目標分子反應的 抗體免疫偵測複合物、及與GAVE8或目標分子活性相關的 酵素聯結測定。 另一具體實施例中,可用方法確認GAVE8表現調節劑 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -61 - 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(d ,其係將細胞接觸候選化合物,並測定在細胞中表現之 GAVE8傳訊 RNA或蛋白質。比較候選化合物存在下 G A V E 8傳訊R N A或蛋白質之表現水準以及缺少候選化合物 時GAVE8傳訊RNA或蛋白質表現之水準。根據比對結果 然後可確認GAVE8表現調節劑之候選化合物。例如,當候 選化合物存在時GAVE8傳訊RNA或蛋白質之表現大於(統 計上顯著的大於)候選化合物不存在時,則可確認此候選化 合物是GAVE8傳訊RNA或蛋白質表現之刺激劑。此外, 當候選化合物存在時GAVE8傳訊RNA或蛋白質之表現小 於(統計上顯著的小於)候選化合物不存在時,則可確認此候 選化合物是GAVE8傳訊RNA或蛋白質表現的抑制劑。細 胞中GAVE8傳訊RNA或蛋白質表現之水準可用在此描述 之偵測GAVE8傳訊RNA或蛋白質的方法測定。_ 在本發明之另一特色中,GAVE8蛋白質可在二雜交測 定或三雜交測定中作爲"餌蛋白質"(參閱例如:美國專利第 5,283,31 7 號;Zervos et al., Cell (1 993)72 : 2 2 3-232 ; Madura et al., J Biol C hem( 1 993)268 : 1 2046-1 2054 ; Bartel et a I., Bio/Techniques (1 993) 14:920-924; Iwabuchi et a I., Oncogene (1 993) 8:1693-1696 ;以及 PCT公布號碼W094/1 0300),以確認可結合至或與GAVE8 交互作用("GAVE8-結合蛋白質”或”GAVE8-bp")及調控 GAVE8活性的其它蛋白質。該類GAVE8結合蛋白質亦可 能涉及GAVE8蛋白質信號之傳播,例如爲GAVE8路徑上 游或下游之元件。 (請先閱讀背面之注意事項再填寫本頁) 裝· 訂 本纸張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -62- 1250209 A7 B7 五、發明説明( 本發明進一步的係關於上述的篩選測定確認的新穎藥 劑以及使用彼進行描述於此之治療或測試。 (請先閲讀背面之注意事項再填寫本頁) B .偵測測定 本文確認之互補D N A序列部份或斷片(以及對應的完整 基因序列),在許多的用途上可作爲多核苷酸試劑。例如該 序列可用在:(i)定位染色體上各基因之圖譜^因此可定位 與先天性疾病相關的基因區域;(M)從小的生物樣品確認個 體(組織分類);以及(Mi)輔助法醫鑑定生物的樣品。該用途 描述於以下之次章節。 經濟部智慧財產局員工消費合作社印製 63 - 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(61) 內含個別人類體細胞染色體之雜種細胞’其製備係可 使用不同哺乳動物(例如:人類以及老鼠細胞)之體細胞。 當人類及老鼠細胞的雜種細胞生長及分裂後。細胞會逐步 地隨機喪失人類染色體,但仍保持老鼠染色體。使用老鼠 細胞不能生長但人類細胞可生長的培養液(由於缺少特定的 選擇酵素),將會保留含有編碼須要的酵素基因之一個人類 染色體。使用各種培養液,可建立各種雜種細胞株面板。 面板中之各細胞株中可含有單一的人類染色體或小數目之 人類染色體,以及整組之老鼠染色體,並可在人類染色體 上定位個別基因特定的圖譜。(UEustachio et al., Science( 1 983)220 : 9 1 9-924)。亦可使用易位以及刪除人 類染色體後,僅內含人類染色體斷片之雜種體細胞。 雜種體細胞之PC R圖譜定位是將特定的序列定位至特 定染色體的快速程序。使用GAVE8序列設計寡核苷酸引子 ,可與面板上特定的染色體斷片達成次定域作用。其它可 同樣地在染色體上定位GAVE8序列圖譜的策略,包括原位 雜化反應(描述於 Fan et al.,Proc Natl Acad Sci USA(1 990)87 : 622 3-27)、前篩選標記的流動分類染色體 法及雜交至染色體專一的互補DNA基因庫之前選擇法。 對細胞分裂中期散佈開之染色體進行DNA序列之螢光 原位雜化反應(FISH),可進一步的用於染色體精確的定位 。可使用化學藥品,例如:秋水仙胺,破壞有絲分裂紡綞 體,將細胞分裂停在細胞分裂中期,如此可得到散佈開之 染色體。染色體可用胰蛋白酶短暫的處理,然後進行 ---------裝-- (請先閲讀背面之注意事項再填寫本頁) 、\sx» 本纸張尺度適用中.國國家標準(CNS ) A4規格(2】0X297公釐) -64 - 1250209 A7 B7 五、發明説明(d (請先閲讀背面之注意事項再填寫本頁)P 1250209 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printed A7 _ B7___ V. Description of invention ( Science (1991) 251: 1351-1355). If the c"e/loxP recombinase system is used to regulate the expression of the introduced gene, the animal into which the gene is introduced may contain a c"e recombinase and a selected protein. For example, the introduced gene encoding the selected protein and the intron coding recombination After the two genes of the enzyme-introduced gene are transferred to the animal, a "double" gene-transforming animal can be constructed. The pure lines of the non-human gene-transforming animals described herein can also be made according to the methods described in Wilmut et al., Nature (1 997) 385:81 0-81 3 and PCT Publication WO 97/07668 and WO 97/0 7669. . Briefly, cells (e.g., somatic cells) of an animal into which a foreign gene has been introduced are isolated, induced to escape from the growth cycle and enter the G phase. This inactive cell is then fused to the nucleus-depleted oocytes isolated from the inactive and inactive cell-like animals (e.g., via the use of electrical pulses). The reconstructed oocytes are then cultured to form morula or blasts, which are then transferred to pseudopregnant female nourishment animals. The cloned line is isolated from cells (e.g., somatic cells) of progeny produced by female nourishing animals. IV. Pharmaceutical Compositions The GAVE 8 nucleic acid molecules, GAVE8 proteins, and anti-GAVE8 antibodies (also referred to herein as "active compounds" of the invention can be incorporated into pharmaceutical compositions suitable for administration. The compositions typically comprise nucleic acid molecules, proteins or An antibody and a pharmaceutically acceptable carrier. The "pharmaceutically acceptable carrier" herein includes any and all solvents, dispersion cultures, coatings, antibacterial and antifungal compatible with pharmaceutical administration. Medicament, isotonic agent, absorption delaying agent, etc. The medicinal active substance uses the culture solution and the drug is already (CNS) (23 0 X 297^^ ) ~~一-49 - (please read the precautions on the back first) Fill in this page) - Binding P. 1250209 A7 B7 V. Description of the invention ((Please read the notes on the back and fill out this page) Known techniques. Any known culture solution other than the range incompatible with the active compound Or a pharmaceutical agent may be considered for use in the composition. The composition may also be incorporated with a supplementary active compound. The pharmaceutical composition of the present invention may be adjusted to a composition compatible with the intended route of administration. Examples of routes include: parenteral, for example, intravenous, intradermal, subcutaneous, oral (e.g., inhalation), transdermal (coated), transmucosal, and rectal administration. The solution or suspension for enteral, intradermal or subcutaneous administration may comprise the following ingredients: a sterile diluent such as water for injection, physiological saline solution, non-volatile oil, polyethylene glycol, glycerol, propylene glycol. Or other synthetic solvents; antibacterial agents such as: benzyl alcohol or methyl paraben; antioxidants, such as: ascorbic acid or sodium bisulfite; chelating agents, such as E DTA; buffer solutions, such as: acetate, lemon An acid or phosphate; and an agent that adjusts the osmotic pressure, such as sodium chloride or dextrose. An acid or base that adjusts the pH, such as HCI or NaOH. The parenteral preparation can be sealed in ampoules and discarded when used. Syringe or multi-dose vial made of glass or plastic. Ministry of Economic Affairs Intellectual Property Bureau g (Medical Consumer Cooperatives printed pharmaceutical composition suitable for injection may include sterile aqueous solution When it is water-soluble) or the dispersion and the sterilized powder which can be prepared immediately by using the sterilized injection solution or dispersion. Suitable carriers include intravenous saline, bacteriostatic water, Cremophor EL ® (BASF; Parsippany, when administered intravenously). NJ) or phosphate buffered saline (PBS). In all cases, the composition must be sterilized and should be a fluid that is easy to inject. It must be stable under the conditions of manufacture and storage, and under storage. It must be resistant to contamination by microorganisms such as bacteria and fungi. The carrier can be a solvent or a dispersion culture solution, which can be used inside - ___ This paper scale applies to the Chinese National Standard (CNS) A4 specification (210X 297 mm) -50-1250209 A7 B7 V. Description of the invention (d contains, for example, water, ethanol, polyol (for example: glycerin, propylene glycol, liquid polyethylene: 3⁄4 (B) glycol, etc.) and suitable mixtures thereof. The use of a coating agent such as lecithin can maintain the required particle size when dispersed and the use of a surfactant can maintain proper fluidity. The action of preventing microorganisms can be achieved by various antibacterial and antifungal agents, for example, p-oxybenzoic acid, chlorobutanol, phenol, ascorbic acid, topical antibacterial agents and the like. Preferred in many cases will include: isotonic agents 'e.g., sugars, polyalcohols such as mannitol, sorbitol, sodium chloride. The composition includes delayed absorption, for example, an agent such as aluminum monostearate or gelatin can be used as a long-term absorption injection composition. The sterilized injection solution can be prepared by injecting the desired amount of the active compound (e.g., GAVE8 protein or anti-GAVE8 antibody) into one or a group of suitable solvents containing the above listed ingredients, followed by filter sterilization. In general, the preparation of the dispersion is carried out by introducing the active compound into a sterile carrier containing the alkaline dispersion culture solution and the other ingredients listed above. When preparing a sterilized powder of a sterilized injection solution, the preferred method is to prepare a powder of the active ingredient produced by vacuum drying and lyophilization with a powder from a previously sterilized solution of any additional desired ingredients. In general, oral compositions can include inert diluents or edible carriers. It can be sealed in gelatin capsules or compressed into tablets. In the case of oral administration, the active compound can be incorporated into the excipient and used in the form of tablets, troches or capsules. Oral compositions can also be prepared using a fluid carrier as a preparation, wherein the compound in the fluid carrier can be administered orally, inhaled, and coughed or swallowed. The composition may include a pharmaceutically compatible binder, and/or an adjuvant material. The paper size is Chinese National Standard (CNS) A4 specification (23 0x 297 mm) ~ " 十' -51· (Read first Note on the back of the page. • Installed -, 11 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printed 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention description (d material. Pills, medicine IX, Capsules, guilloche and the like may contain any of the following ingredients: a similar compound: a binding agent such as microcrystalline cellulose, Tragacons gum or gelatin; an excipient such as starch Or lactose; disintegrating agents, for example: alginic acid, skin glue (Prim〇ge|) or corn starch; lubricants, such as: magnesium stearate or sterotes; sliding 'for example, monoxide a colloid; a sweetener such as sucrose or saccharin; or a flavoring agent such as peppermint, methyl salicylate or an orange flavoring agent. In the case of inhalation administration, the compound is in the form of an aerosol from a pressurized container or contains Proper propellant, such as a gas For example, a drug dispenser or a sprayer can be sprayed and transported. It can also be administered systemically via mucosal or transdermal methods. When administered by mucosal or transdermal administration, a suitable penetrating agent that can pass through the barrier can be used in the formulation. In general, the penetrant is a known art 'including, for example, an amphoteric surfactant, a bile salt, and a fusidic acid derivative when administered via a mucosa. Transmucosal administration can be accomplished by using a nasal spray or a suppository. When the transdermal administration is carried out, the active compound can be adjusted into a generally known ointment ointment, gel or cream. The ointment can also be prepared in the form of a suppository (for example, a conventional suppository such as cocoa butter and other glycerides). Or retention of the enema to carry out the rectal delivery. In one embodiment, the active compound can be prepared with a carrier that protects against rapid elimination of the body, such as a controlled release formulation, including implants and microencapsulated Transport system. Biodegradable, biocompatible polymers can be used, for example: ethylene vinyl acetate, polyanhydride, polyglycolic acid, collagen Protein, poly-orthoester and polylactic acid. Preparation (please read the back note and fill out this page) This paper scale applies to Chinese National Standard (CNS) A4 specification (210X 297 mm) -52- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 5, Invention Description (5 (^ The method of the formulation is well known to professionals familiar with this technique. The material is also commercially available from Alza Corporation and Nova Pharmaceuticals, I nc. A suspension of granules (including lipid globules that administer infected cells with a single antibody against a viral antigen) can also be used as a pharmaceutically acceptable carrier. It can be prepared according to methods well known to those skilled in the art, for example as described in U.S. Patent No. 4,522,81. Oral or parenteral compositions are especially advantageous for forming dosage unit forms which are easy to administer and have a uniform dosage. Dosage unit form as used herein refers to a single dose formed by physically unconnected units, each unit containing a predetermined amount of active compound being capable of producing the desired therapeutic effect with a carrier which is computationally pharmaceutically required. Whether administered in one or more separate doses or continuously, depending on the type and severity of the disease, antibodies from about 1 μg/kg to 15 mg/kg (eg 〇 1 to 20 mg/kg) are administered to The patient's starting candidate dose. Depending on the factors mentioned above, representative daily doses range from about 1 microgram/kg to 100 mg/kg or more. When administered repeatedly for several days or longer, depending on the symptoms, the treatment may be prolonged until the symptoms of the disease are suppressed. However, other dosing regimens are also applicable. The progress of treatment can be easily monitored and measured using the techniques of the experience. A typical administration regimen is disclosed in WO 94/CM188. The specification of the dosage unit form of the present invention is directly dependent on the unique characteristics of the active compound and the particular therapeutic effect desired to be achieved, as well as the limitations of the treating individual in the art of the active compound formulation and in the art. The nucleic acid molecule of the invention can be inserted into a vector and used as a vector for gene therapy. The vector of gene therapy can be delivered to the patient, for example, intravenously, topically (US Patent No. 5,328,470) or stereotactic injection (see (Please read the back note first and then fill out this page). China National Standard (CNS) A4 Specification (210X29? mm) -53> 1250209 A7 B7 Ministry of Economic Affairs Zhici Property Bureau Staff Consumer Cooperative Printed 5, Invention Description (51) For example: Chen et al., Proc Natl Acad Sci USA (1 994) 91 : 3 0 54-30 57). The pharmaceutical preparation of the gene therapy vector may comprise a gene therapy carrier and an acceptable diluent, or may comprise a sustained release matrix encapsulating the gene delivery vehicle. The recombinant gene can be used to make a complete gene delivery vector, such as a retrovirus vector, and the pharmaceutical preparation can include one or more cells that produce a gene delivery system. The pharmaceutical composition can be included in the container together with the administration instructions. In the form of a mask or dispenser. V. Uses and Methods of the Invention Nucleic acid molecules, proteins, protein homologs, and antibodies described herein may be used in one or The following methods are performed: a) screening assays; b) detection assays (eg, chromosome maps, tissue classification, forensic biology); c) predictive drugs (eg, diagnostic assays, predictive assays, clinical trials) And pharmacogenetic monitoring); and d) treatment (eg, therapeutic and prophylactic). The G A V E 8 protein that interacts with other cellular proteins can be used to (i) regulate cell proliferation; (Μ) regulate cell differentiation; and (j j j) regulate cell remnant. The isolated nucleic acid molecule of the present invention can be used to express a GAVE 8 protein (for example, expressed in a host cell in a gene therapy by a recombinant expression vector), and can be used to detect (eg, in a biological sample) GAVE 8 signaling RNA or GAVE8 gene. Genetic damage, and regulation of GAVE8 activity. In addition, the GAVE8 protein can be used to screen for drugs or compounds that modulate GAVE8 activity or expression and to treat conditions characterized by insufficient or excessive production of GAVE 8 protein or GAVE8 wild-type protein, GAVE8 eggs (read first read on the back) Note: Please fill out this page again. This paper scale applies to China National Standard (CMS) A4 specification (210><297 public) -54- 1250209 A7 B7 Ministry of Economic Affairs Zhici Property Bureau employee consumption cooperative printing 5, invention description (A drug or compound having a reduced or abnormal white matter activity. Furthermore, the anti-GAVE8 antibody of the invention can be used to detect and isolate the GAVE8 protein and modulate G AV E 8 activity. The invention further relates to the above described herein. Screening assays for novel agents identified and using their treatment or testing. A. Screening assays The present invention provides methods (also known as "screening assays") to confirm modulators that bind to GAVE8 protein or have the effect of stimulating or inhibiting GAVE8 protein Candidates or test compounds or agents (eg, ···peptides, eg, GAVE 8 or GAVE 8 activity) Classes, peptidomimetics, small molecules or other drugs. In one of the embodiments, the invention provides a candidate or test compound for screening for activity of a GAVE 8 protein or polypeptide or a biologically active portion thereof that binds to or modulates a membrane-bound form. Assay method. The test compound of the present invention can be obtained from a combinatorial gene pool known in the art, including: a biological gene pool; a spatially located parallel solid phase or lytic gene library; a deconvolution synthetic gene library; a gene library of "a bead-compound"; and a synthetic gene library selected using affinity chromatography. The gene library of the organism is limited to the peptide gene pool, while the other four gene banks are peptides, non-peptide oligomers or Small molecule compound gene library (Lam, Anticancer Drug Des (1 997) 1 2:1 45). Examples of methods for synthesizing molecular gene pools can be found, for example, in DeWitt et al., Proc Natl Acad Sci USA (1 993) 90 : 6909 ; Erb et al · , Proc Natl Acad Sci US A ( 1 994 ) 91 : 1 1 422 ; Zuckermann et al . , J Med Chem (1 994 ) 37 : 2678 ; Cho et (please read the notes on the back first) Fill in again Page) - Loading · This paper scale applies to China National Standard (CNS) Α4 Specifications (2) 297 297; PCT) -55 - 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Employees Consumption Cooperative Printed 5, Invention Description (53) 3 I., Science (1 993) 261: 1 3 0 3 ; Carrel I eta I., Angew Chem Int Ed Engl (1994) 33: 2059; Care II et al., Angew Chem Int Ed Engl (1994) 33: 2061; And Gallop et al., J Med Chem (1 994) 37: 1 233 〇 compound gene library can be present in solution (eg: ought oughten, B io/Techniques (1 992 ) 1 3 : 4 1 2-42 1 ) , or ball (La m, N at ure (1991) 354: 82-84), wafer (Fodor, Nature (1 993) 3 6 4: 555-556), bacteria (US Patent No. 5, 223, 409), spores ( U.S. Patent Nos. 5,571,698; 5,403,4 84; and 5,223,409), plastids (Cull et a I., Proc Natl Acad Sci USA (1 992) 89: 1 865-1 869) or phage (Scott et al., Science) (1 990) 249: 386-390; Devlin, Science (1990) 249: 4 0 4-406; C wir I a et a I., Proc Natl Acad Sci USA (1 990) 87: 6378-6382; and Felici J Mol B iol (1991) 222 : 301-310 Bu Since the GAVE8 ligand is SIP, it is possible to investigate the specific portion of the action of S I P and G A V E 8 by a known method. This particular region can be synthesized by conventional biosynthetic methods, combined with carbohydrate synthesis methods and enzymatic reaction synthesis. This SIP portion corresponds to an "antigenic epitope". The GAVE8 antigenic epitope can be modified with other monomeric or non-carbohydrate moieties to produce a modified epitope that enhances properties (e.g., blood half-life, GAVE8 binding constant, etc.). Any suitable epitope variant can be assayed using the binding and screening assays taught herein. In one embodiment, the assay is a cellular assay wherein the cell surface-expressing membrane-bound form of the GAVE 8 protein, or a biologically active portion thereof, is applied to the Chinese National Standard (CNS) A4 specification (210 x 297 mm). (Please read the precautions on the back and fill out this page) - Packing, v, f-56- 1250209 A7 Ministry of Economic Affairs, Intellectual Property Bureau, Staff Consumer Cooperative, Printed B7 V. Invention Description (The cells are in contact with test compounds, The ability of the test compound to bind to the GAVE8 protein. The cell can be a yeast cell or a mammalian-derived cell. The ability of the test compound to bind to the GAVE8 protein is determined, and the test compound can be coupled to the label of the radioisotope or enzyme to detect the complex. a compound labeled to determine the binding of a test compound to a GAVE 8 protein or a biologically active portion thereof. For example, a test compound can be directly or indirectly labeled 125, 35S, 14C or 3H, and the radioisotope can directly count radioactivity or count scintillation. In addition, test compounds can be labeled with enzymes, such as: Root peroxidase, alkaline phosphatase, or luciferase, and can be transformed with a suitable substrate to detect the labeled enzyme. In one of the preferred embodiments, the assay comprises a cell surface representation membrane. - binding of the G AV E8 protein, or a biologically active portion thereof, to a conventional GAVE8 binding compound to form a assay mixture, contacting the assay mixture with the test compound, and determining the interaction of the test compound with the GAVE8 protein. The ability to determine the ability of a test compound to interact with a GAVE8 protein comprises determining the ability of the test compound to preferentially bind to GAVE8 or a biologically active portion thereof as compared to conventional compounds. In another embodiment, the assay is a cellular assay, the system Contacting a cell that expresses a membrane-bound form of the GAVE8 protein, or a biologically active portion thereof, with a test compound determines the ability of the test compound to modulate (eg, stimulate or inhibit) the activity of the GAVE8 protein or a biologically active portion thereof. The ability of a compound to modulate the activity of GAVE8 or its biologically active portion , can be determined by the ability to determine the binding or interaction of GAVE8 protein and GAVE8 target molecule. The "target molecule" in this article is compatible with (please read the back note before filling this page) _ this paper scale Applicable to China National Standard (CNS) A4 Specification (210X 297 mm) -57- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 5, Invention Description (y GAVE8 protein binding or interaction molecule, such as cell surface expression The GAVE 8 protein molecule, the molecule on the second cell surface, and the molecule in the extracellular environment are 'molecular or cytoplasmic molecules associated with the inner surface of the cell membrane. The GAVE8 target molecule can be a non-GAVE8 molecule or a GAVE8 protein or polypeptide of the invention. In a specific embodiment, the GAVE8 target molecule is a component of a message delivery pathway that enhances extracellular signals (e.g., signals produced by binding of the compound to the membrane-bound GAVE8 molecule) via the cell membrane into the cell. For example, the target molecule may be a protein between catalytically active secondary cells or a protein that enhances downstream signaling molecules associated with GAVE8. In another embodiment, GAVE 1 can be made using known techniques to perform signal transduction in a target cell as taught herein, see for example: W0 00/22131 and W0 00/22129, and then expose the cells. To various candidate modulators to determine whether signal activity is enhanced (disclosed as a candidate agonist), or to reduce (disclose it as a candidate antagonist), or to reduce activity below baseline (which is a candidate retro-acting agent) ). The ability to bind to or interact with a GAVE8 target molecule can be determined by direct binding of the methods described above. In a preferred embodiment, the ability to determine whether a GAVE8 protein binds to or interacts with a GAVE8 target molecule can be determined by the activity of the target molecule. For example, it can detect secondary messengers of cells induced by target molecules (including, but not limited to, intracellular Ca2+, dimercaptoglycerol, and IP3), detect the target molecule's catalysis/activity against appropriate receptors, and detect Detecting reporter genes (eg, operably linking GAVE8-reactive regulatory elements to this paper size encoding a detectable marker (eg, luciferin) using Chinese National Standard (CNS) A4 specification (210X297 mm) (please Read the precautions on the back and fill out this page) - Install ' 订 f -58- 1250209 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention instructions (enzyme nucleic acid) induced, or detect cell response (such as cells Differentiation or cell proliferation) to determine the activity of a target molecule. In another embodiment, the assay of the invention is a cell-free assay comprising contacting a GAVE8 protein or a biologically active portion thereof with a test compound, determining binding of the test compound to GAVE8 The ability of the protein or its biologically active portion. As described above, the test compound can be directly or indirectly assayed for binding to the GAVE8 protein. In a specific embodiment, the assay comprises contacting a GAVE8 protein or a biologically active portion thereof with a conventional GAVE8-binding compound to form an assay mixture, contacting the assay mixture with the test compound, and determining the ability of the test compound to interact with the GAVE8 protein, wherein The ability of a test compound to interact with a GAVE 8 protein comprises determining the ability of the test compound to preferentially bind to GAVE8 or a biologically active portion thereof as compared to conventional compounds. In another embodiment, the assay is a cell-free assay comprising Contacting a GAVE8 protein or a biologically active portion thereof with a test compound and determining the ability of the test compound to modulate (eg, stimulate or inhibit) the activity of the GAVE8 protein or a biologically active portion thereof. The ability of the test compound to modulate GAVE8 activity is determined by the above description The method of binding determines the ability of the GAX/E8 protein to bind to the GAVE8 target molecule. In another embodiment, the ability of the test compound to modulate GAVE8 activity is determined, and the GAVE8 protein can be further regulated to control the GAVE8 target molecule. The ability to complete, for example, the catalysis/activity of the target molecule to the appropriate substrate can be determined by the methods previously described. In another embodiment, the cell-free assay comprises exposure to the GAVE8 protein (please read the back note before completing this page) * Packing and ordering ip-· This paper scale is applicable to China National Standard (CNS) A4 specification (210X 297 mm) -59- 1250209 A7 B7 V. Description of invention (57) Combination of quality or biological activity with conventional knowledge The GAVE 8 compound forms the assay mixture, contacts the assay mixture and the test compound, and determines the ability of the test compound to interact with the GAVE8 protein, wherein determining the ability of the test compound to interact with the GAVE8 protein comprises determining that the GAVE8 protein preferentially binds to or modulates the GAVE8 target molecule. The ability to activate. The cell-free assay of the present invention may use a soluble or membrane-bound GAVE8. The membrane-bound GAVE8 can be maintained in a solution state by using a lysing agent when performing cell-free assay using membrane-bound GAVE8. Examples of the solubilizing agent include a nonionic amphoteric surfactant, such as η-octyl glucoside, η-dodecyl glucoside, η-dodecyl glucoside, octyl decyl-hydrazine- Methyl glucosamine, decyl-hydrazine-methyl glucosamine, Triton Χ-100, Triton X-1 14, Thesit®, isotridecyl poly(ethylene (ethylene) glycol-ether) n, 3-[ (3-Chloroaminopropyl)dimethylamino]-1 -propane sulfonate (CHAPS), 3-[(3-chloroguanidinopropyl)dimethylamino]-2-hydroxyl 1-propane sulfonate (CHAPSO), or N-dodecyl-N,N-dimethyl-3-ammonio-1·propane sulfonate. In one or more specific embodiments of the above assays of the present invention, GAVE8 or a target molecule can be satisfactorily immobilized to enhance the separation of the complex from an uncomplexed form of one or both proteins, and to provide automated assays. The binding of the test compound to GAVE8, or the interaction of GAVE8 with the target molecule in the presence and absence of the candidate compound, can be accomplished in any suitable container containing the reactants. Examples of the container include: micro test trays, test tubes, and microcentrifuge tubes. In one embodiment, the fusion protein provides an additional structural region that allows one or two proteins to bind to the matrix. The paper size applies to the Chinese National Standard (CNS) A4 specification (2) 0X 297 mm) ( Read the first note on the back and then fill out this page. Installed. Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed -60 - 1250209 A7 _____ B7 V. Invention Description (d (Please read the note on the back and fill out this page) For example, glutathione-S-transferase/GAVE8 fusion protein or glutathione-S-transferase/target fusion protein, which can be adsorbed to glutathione agarose beads (Sigma Chemical) , St. Louis, MO) or a glutathione-derived micro-test disc, which can then be combined with a test compound or test compound and a non-adsorbed target protein or GAVE8 protein, and the mixture is reacted under conditions for complex formation (eg Salts and pH under physiological conditions. After the reaction, wash the beads or micro-test disc holes, remove any unbound components, directly or indirectly measure the formed complex, for example, as explained above In addition, the 'complex can be dissociated from the matrix, and the level or activity of GAVE8 binding can be determined using standard techniques. The Ministry of Economic Affairs, Intellectual Property Office, the employee consumption cooperative, the printing technique of other immobilized proteins on the substrate can also be used in the present invention. Screening assays. For example, GAVE8 or its target molecule can be immobilized using the conjugation of biotin and streptavidin. Biotinylated GAVE8 or target molecules can be used in techniques known in the art (eg biotinylation group) The kit, Pierce Chemicals, Rockford, IL) was prepared from biotin-NHS (N-hydroxy-succinimide) and fixed in a 96-well test dish coated with streptavidin (Pierce Chemicals). An antibody that reacts with GAVE8 or a target molecule but does not interfere with binding of the GAVE8 protein to the target molecule can be conjugated to the well of the plate to capture the unbound target or GAVE8 in the well with the antibody. - In addition to the method of immobilizing the complex, it may also include the use of an antibody immunodetection complex that reacts with GAVE8 or a target molecule, and with GAVE8 or a target Molecular activity-related enzyme binding assay. In another specific example, the method can be used to confirm the GAVE8 performance modifier. The paper size is applicable to the Chinese National Standard (CNS) A4 specification (210X 297 mm) -61 - 1250209 A7 B7 Ministry of Economics Intellectual Property Bureau employee consumption cooperatives printed five, invention instructions (d, which is to contact the cells with candidate compounds, and determine the GAVE8 signaling RNA or protein expressed in the cells. Compare the performance level of GAVE 8 signaling RNA or protein in the presence of candidate compounds and lack GAVE8 signals the level of RNA or protein expression when a candidate compound is present. Based on the alignment results, candidate compounds of the GAVE8 performance modulator can then be confirmed. For example, when the expression of GAVE8 signaling RNA or protein in the presence of a candidate compound is greater than (generally significantly greater than) the absence of a candidate compound, then the candidate compound is confirmed to be a stimulator of GAVE8 signaling RNA or protein expression. Furthermore, when the GAVE8 signaling RNA or protein exhibits less than (statistically significantly less than) the candidate compound in the absence of the candidate compound, it can be confirmed that the candidate compound is an inhibitor of GAVE8 signaling RNA or protein expression. The level of GAVE8 signaling RNA or protein expression in the cells can be determined by the method described herein for detecting GAVE8 signaling RNA or protein. In another feature of the invention, the GAVE8 protein can be used as a "bait protein" in a two-hybrid assay or a three-hybrid assay (see, e.g., U.S. Patent No. 5,283,31 7; Zervos et al., Cell (1) 993) 72 : 2 2 3-232 ; Madura et al., J Biol C hem (1 993) 268: 1 2046-1 2054; Bartel et a I., Bio/Techniques (1 993) 14: 920-924; Iwabuchi et a I., Oncogene (1 993) 8:1693-1696; and PCT publication number W094/1 0300) to confirm that it can bind to or interact with GAVE8 ("GAVE8-binding protein" or "GAVE8-bp" ;) and other proteins that regulate GAVE8 activity. Such GAVE8 binding proteins may also be involved in the propagation of GAVE8 protein signals, such as elements upstream or downstream of the GAVE8 pathway. (Please read the precautions on the back and fill out this page.) Loading · The size of the paper is applicable to the Chinese National Standard (CNS) A4 specification (210X 297 mm) -62- 1250209 A7 B7 V. Invention Description ( Further invention For the novel agents identified in the above screening assays and the treatments or tests described therewith (please read the notes on the back and fill out this page) B. Detect the complementary DNA sequence portions or fragments identified herein. (and the corresponding complete gene sequence) can be used as a polynucleotide reagent for many purposes. For example, the sequence can be used to: (i) map a gene on a chromosome and thus locate a gene region associated with a congenital disease; (M) Confirmation of individuals (tissue classification) from small biological samples; and (Mi) Samples of assisted forensic identification of organisms. This use is described in the following subsections. Ministry of Economic Affairs Intellectual Property Office Staff Consumer Cooperatives Printed 63 - 1250209 A7 B7 Economy Ministry of Intellectual Property Bureau employee consumption cooperative printing 5, invention description (61) hybrid cells containing individual human somatic chromosomes The somatic cells of different mammals (for example, human and mouse cells) can be used. When the hybrid cells of human and mouse cells grow and divide, the cells gradually and randomly lose the human chromosome, but still maintain the mouse chromosome. A culture medium that cannot grow but human cells can grow (due to the lack of specific selection enzymes) will retain a human chromosome containing the enzyme gene encoding it. Various culture media can be used to create panels of various hybrid cell lines. A cell line can contain a single human chromosome or a small number of human chromosomes, as well as the entire set of mouse chromosomes, and can map individual gene-specific maps on human chromosomes (UEustachio et al., Science (1 983) 220: 9 1 9-924). It is also possible to use translocations and hybrid somatic cells containing human chromosome fragments after deletion of human chromosomes. PC R map localization of hybrid somatic cells is a rapid procedure for localizing specific sequences to specific chromosomes. GAVE8 sequence design oligonucleotide primer, which can be dyed with specific on the panel The chromosomal fragment achieves a sublocalization. Other strategies for locating the GAVE8 sequence map on the chromosome, including in situ hybridization (described in Fan et al., Proc Natl Acad Sci USA (1 990) 87: 622 3 -27), the pre-screening marker for the flow classification chromosome method and the hybridization to the chromosome-specific complementary DNA gene pool pre-selection method. The fluorescence in situ hybridization reaction (FISH) of the DNA sequence is carried out on the chromosomes dispersed in the middle of the cell division. Further for precise chromosome localization, chemicals such as colchicine can be used to destroy the mitotic spine and stop cell division in the middle of cell division, so that scattered chromosomes can be obtained. The chromosome can be treated with trypsin for a short time, then ------------- (Please read the back note first and then fill out this page), \sx» This paper scale applies to the national standard ( CNS ) A4 size (2) 0X297 mm) -64 - 1250209 A7 B7 V. Description of invention (d (please read the notes on the back and fill out this page)
Giemsa染色。各染色體可產生明亮及微黑的條帶模式,並 確認個別地染色體。FISH技術可用於500或600鹼基對之 DNA序列。然而大於1,000鹼基對時,可簡易偵測到與獨 特的染色體位點之結合,且有較高的充分之信號強度。較 佳者爲1,〇〇〇鹼基對,更佳者爲2,000鹼基對,將可在合 理的時間內得到良好的結果。該技術可參閱Verma et al., (Human Chromosomes: A Manual of Basic Techniques (Pergamon Press, New York, 1 988))。 進行染色體圖譜測試之試劑可標定個別地單一染色體 或染色體上單一的位點,或可用面板試劑標記多重位點及/ 或多重染色體。對應至基因非編碼區之試劑亦可用於定位 圖譜之目的。基因族內有一些編碼序列是守恆的序列,如 此會增加染色體圖譜定位時偶發性雜交的機會。 經濟部智慧財產局員工消費合作社印製 一旦序列被圖譜定位於染色體上精確的位置後,序列 在染色體上之物理位置可與基因的圖譜數據相比較。(該數 據可參見例如:V· McKusick, Mendel ian Inheritance in Man, available on-line through Johns Hopkins University, Welch Medical Library)。然後(定位於相同染 色體區域之)基因與疾病之間的關係可經由聯結分析確認(物 理上相鄰基因的共同遺傳),描述於例如:Egeland et al., Nature (1 987) 325:783-787 ° 此外,可測定受疾病影響及不受fe響的個人其GAVE8 基因D N A序列之間的差異。若在一些或所有受影響的個人 中觀察到突變,但在不受影響的個中沒有觀察到突變,則 本纸張尺度適用中.國國家標準(CNS ) A4規格(2]〇X 297公釐) -65- 1250209 A7 B7 五、發明説明( 可推論該突變可能是特定疾病的病因。比較受影響及不受 影響的個人,一般而言包含先視察染色體構造的改變,例 如從散佈的染色體顴察可見的刪除或易位或可使用 p c R偵 測該D N A序列。最後,對數個個人進行完整的基因定序可 證實突變之存在,並對突變與多型現象加以區別。 2.組織分類 本發明之GAVE8序列亦可從生物的樣品確認個人。例 如美軍即使用限制酶片段長度之多形性技術(RFLP)對人員 進行確認。此技術中將個人的基因體D NA用一種或多種限 制酶水解,進行南方墨點探測,以其產生的獨特條帶進行 人員確認。此方法沒有現行的n Dog Tags ”之限制,不會因 遺失、掉包或偷竊而產生正性鑑定的困難。此外,本發明 之序列可適用於作爲RFLP的DNA標識(描述於美國專利 第號.5,272,057)。 此外,本發明之序列可用於另一技術,測定基因組中 選擇部份的D N A序列實際上之鹼基-至-鹼基排列。因此, 在此描述之GAVE8序列可用於製備二個5·以及3’端序列的 PCR引子。然後可用此引子放大基因體DNA並提供其序列 〇 因爲對偶基因的差異所以每個人的該D N A序列都有獨 特的基因組,所以該方法可製備個人對應至DNA序列的面 板,並可提供獨特的個人鑑定。本發明之序列可用來從個 人及從組織取得該鑑定序列。本發明之GAVE8序列獨特的 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) (請先閱讀背面之注意事項再填寫本頁)Giemsa staining. Each chromosome produces a bright and slightly black band pattern and confirms individual chromosomes. FISH technology can be used for DNA sequences of 500 or 600 base pairs. However, when it is larger than 1,000 base pairs, it can be easily detected in combination with a unique chromosomal locus and has a high sufficient signal intensity. The better one is the 〇〇〇 base pair, and the better is 2,000 base pairs, which will give good results in a reasonable time. This technique can be found in Verma et al., (Human Chromosomes: A Manual of Basic Techniques (Pergamon Press, New York, 1 988)). The reagents for performing the chromosome mapping test can be individually labeled on a single chromosome or on a single chromosome, or multiple sites and/or multiple chromosomes can be labeled with panel reagents. Reagents corresponding to the non-coding regions of the gene can also be used for mapping purposes. Some coding sequences within the gene family are conserved sequences, thus increasing the chance of sporadic hybridization when the chromosome map is located. Printing by the Intellectual Property Office of the Ministry of Economic Affairs, the Consumer Cooperatives Once the sequence is mapped to the exact location on the chromosome, the physical location of the sequence on the chromosome can be compared to the spectral data of the gene. (See, for example, V. McKusick, Mendel ian Inheritance in Man, available on-line through Johns Hopkins University, Welch Medical Library). The relationship between the gene (located in the same chromosomal region) and the disease can then be confirmed by linkage analysis (common inheritance of physically adjacent genes) as described, for example, in Egeland et al., Nature (1 987) 325:783- 787 ° In addition, differences in the GAVE8 gene DNA sequence between individuals affected by the disease and not affected by fe can be determined. If a mutation is observed in some or all of the affected individuals, but no mutation is observed in the unaffected one, the paper size applies to the National Standard (CNS) A4 specification (2) 〇 X 297 PCT) -65- 1250209 A7 B7 V. INSTRUCTIONS (It can be inferred that the mutation may be the cause of a particular disease. The more affected and unaffected individuals generally include first-inspected changes in chromosome structure, such as from scattered chromosomes. Observe the visible deletion or translocation or use pc R to detect the DNA sequence. Finally, complete genetic sequencing of several individuals can confirm the presence of mutations and distinguish between mutations and polymorphisms. The GAVE8 sequence of the present invention can also confirm an individual from a biological sample. For example, the US military uses a polymorphic technique (RFLP) of restriction enzyme fragment length to confirm a person. In this technique, the individual's genetic DNA is restricted by one or more types. Enzymatic hydrolysis, the detection of southern ink spots, the identification of the unique strips produced by the personnel. This method has no current n Dog Tags" restrictions, will not be lost, lost Packing or theft creates difficulties in positive identification. Furthermore, the sequences of the invention are applicable to DNA markers as RFLPs (described in U.S. Patent No. 5,272,057). Furthermore, the sequences of the invention can be used in another technique for determining genomes. The DNA sequence of the selected portion is actually a base-to-base arrangement. Therefore, the GAVE8 sequence described herein can be used to prepare PCR primers for the two 5' and 3' sequences, and then the primer can be used to amplify the genome. DNA and its sequence 〇 Because of the difference in the dual gene, each person's DNA sequence has a unique genome, so the method can prepare a panel corresponding to the DNA sequence, and can provide a unique personal identification. The sequence of the present invention is available. The identification sequence is obtained from the individual and from the organization. The unique paper size of the GAVE8 sequence of the present invention is applicable to the Chinese National Standard (CNS) A4 specification (210X 297 mm) (please read the back note first and then fill out this page)
P 裝· 經濟部智慧財產局g(工消費合作社印製 -66 - 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(64) 代表人類基因組的一部份。序列編碼區可以發生一些對偶 基因的變異,而非編碼區可發生較大程度之變異。據估計 人與人之間對偶基因的變異頻率約爲500個鹼基發生一次 。在此描述之各序列在某些程度上可作爲鑑定個人D N A之 標準樣品。因爲在非編碼區可發生大量的多型現象,所以 可用較少之序列來區分個人。序列確認號碼:1之非編碼序 列可提供一組1〇至1,000個的引子,其可放大產生未編 碼的序列之1 00個鹼基,以進行正性之個人鑑定。若使用 預測的編碼序列,例如序列確認號碼:1,則進行正性個人 鑒定之更適當的引子數目爲500-2,000。 若從在此描述GAVE8序列中的一組試劑產生用以進行 個人獨特鑑定的資料庫,則那些相同的試劑可在稍後用以 _ 確認個人之組織。使用獨特的鑑定資料庫,可自極小組織 樣品中對個人(不論死活)進行正性鑑定。 3.在法醫生物學上部分的GAVE8序列的用途 DN A鑑定技藝亦可用於法醫生物學。法醫生物學是使 用在罪案現埸發現的基因類之生物證據進行正性確認(例如 犯罪者)的科學領域。進行該鑑定,可使用P C R技藝從罪 案現埸發現採集到的非常小生物的樣品,例如組織,例如 :毛髮或皮膚、或體液,例如··血液、唾液或精液,放大 DNA序列。然後可將放大的序列與標準序列相比較,從而 鑑定生物樣品的來源。 本發明之序列可用於提供多核苷酸試劑,例如P C R引 本紙張尺度適用中國"^^準(CNS ) A4規格(2】OX 297公釐) (請先閱讀背面之注意事項再填寫本頁) 0, 裝- 訂 f -67- 1250209 A7 B7 五、發明説明( 子,標定人類基因組特定的基因座,其可增進D N A法醫鑑 定的可靠度,例如,提供另一”識別記號"(即另一特定的個 人之獨特的D N A序列)。如上述所言,實際的鹼基序列資料 經限制酶產生斷片後可形成精確的另一種圖樣,以進行鑑 定。標定序列確認號碼:1非編碼區之序列,尤其是適用於 產生大量多型現象,因此使用此非編碼區之技術區別個人 會更爲容易。多核苷酸試劑之實施例包括GAVE8序列或其 部份,例如具有至少 20或30個鹼基長度源自序列確認號 碼:1之非編碼區之斷片。 在此描述之GAVE8序列可用於進一步的提供多核苷酸 試劑,例如標記的或可標記的探針,其可用於例如原位雜 化反應技術,以確認特定的組織,例如腦組織。當法醫病 理學家面對未知來源之組織時,此技術非常有用。該 GAN/E8探針可經由物種及/或器官型之面板確認組織。 在相似的方法中,可用試劑(例如G A V E 8引子或探針) 對污染之組織培養物進行篩選(即在不同細胞類型之培養混 合物中進行篩選)。 B.預測藥物 本發明亦關於預測藥物之領域,其中可使用診斷的測 定、預測測定、藥物遺傳學以及臨床監測,對個人進行預 防上地測試。據此,本發明之特色之一係關於診斷的測定 ,以決定GAVE8蛋白質及/或核酸之表現與GAVE8的活性 ’從生物的樣品(例如:血液、尿液、冀便、血淸、細胞、 本紙張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) (請先閲讀背面之注意事項再填寫本頁) -裝- 、11 經濟部智慧財產局8工消費合作社印製 -68- 1250209 A7 B7 五、發明説明(^ 組織)中測定個體是否患有與異常的GAVE8表現或活性相 關的疾病或病症,或有發展成病症之風險。本發明亦提供 預測測定,決定個體是否有發展與GAVE8蛋白質、核酸表 現或活性相關病症的風險。例如,在生物的樣品中可測定 G.AVE8基因之突變。此測定可作爲預測之目的,從而對個 體在其特徵在於或相關於GAVE8蛋白質、核酸表現或活性 之病症開始發作之前進行預防上地治療。 本發明之另一特色是提供方法決定個體中GAVE8蛋白 質、核酸表現或GAVE8之活性,從而選擇適當的治療或預 防劑(在此稱爲"藥物遺傳學")。藥物遺傳學可基於病患的基 因型選擇治療或預防性的治療病患的藥劑(例如,檢查病患 之基因型,測定病患對特定藥劑反應的能力)。 本發明另一特色係關於監測臨床的試驗上藥劑(例如藥 物或其它化合物)對GAVE8表現或活性產生之影響。 本發明藥劑及其它藥劑將在下一章中作進一步的詳細 描述。 1.診斷的測定 偵測生物樣品中GAVE8存在與否的典型方法包含:從 測試患者身上得到生物樣品,將生物樣品與能偵測GAVE8 蛋白質或編碼GAVE8蛋白質之核酸(例如:傳訊RNA、基 因體D N A)的化合物或藥劑接觸,因而偵測生物樣品中存在 的GAVE8。偵測GAVE8傳訊RNA或基因體DNA的較佳藥 劑爲能雜交至GAVE8傳訊RNA或基因體DNA的標記核酸 本紙張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) (請先閲讀背面之注意事項再填寫本頁) 裝· 、1 經濟部智慧財產局員工消費合作社印製 -69- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明( 探針。核酸探針可爲例如,全長GAVE8核酸、例如序列確 認號碼:1之核酸或其部分、例如至少1 5、30、50、1 00 ' 2 50或500核苷酸長度之寡核苷酸。以及在迫切的條件 下足以特別地雜交至GAVE8傳訊RNA或基因體DNA。本 發明應用於診斷測定的其它適當探針將描述於此。 偵測GAVE8蛋白質較佳的藥劑是能結合至GAVE8蛋 白質的抗體,較佳之抗體具有可偵測的標記。抗體可爲多 株的抗體’或更佳的單株抗體。可使用完整的抗體,或其 斷片(例如:Fab或F(at)2)。本文術語中關於探針或抗體 之”標記的”,包含經偶合(即物理聯結)可偵測的物質至探針 或抗體之直接地標記探針或抗體,以及與直接標記的另一 試劑反應之間接的標記探針或抗體。間接標記的實施例包 括:使用螢光標記的二次抗體以偵測一次抗體以及使用終 端標記生物素之DNA探針,因而可用螢光標記的抗生蛋白 鏈菌素加以偵測。本文術語之"生物的樣品"包括:分離自 患者之組織、細胞及生物的體液,以及患者體內之組織、 細胞及體液。本發明之偵測方法可用以在活體內與活體外 偵測生物樣品之G A V E 8傳訊R N A、蛋白質或基因體〇 N A 。例如’在活體內偵測G AV E 8傳訊R N A之技藝包括:北 方雜交及原位雜化反應。活體外偵測GAVE8蛋白質之技藝 包括:酵素聯結的免疫吸附測定(酵素聯結免疫抗體檢測法) 、西方轉漬法、免疫沈澱以及免疫螢光。偵測到GAVE8基 因體D N A之活體外技藝包括南方雜交。此外,偵測到 GAVE8蛋白質之活體內技藝包括對患者引入標記的抗_ (請先閲讀背面之注意事項再填寫本頁) -裝_ f 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公f ) -70- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(d GAVE8抗體。例如,抗體可標記放射性的標識後用標準影 像技藝偵測在患者中出現之位置 。 具體實施例之一中,可從測試患者中取得含有蛋白質 分子的生物樣品。此外,可從測試患者中取得含有傳訊 RNA分子的生物樣品或從測試患者中取得基因體DNA分子 。較佳的生物樣品是用一般方法分離自患者的周邊血液白 血球樣品。 另一具體實施例中,該方法進一步的包含從對照組患 者中取得對照組的生物樣品,接觸對照試樣與能偵測 GAVE 8蛋白質、傳訊RNA或基因體DNA之化合物或藥劑 ,偵測生物樣品中存在的GAVE8蛋白質、傳訊RNA或基 因體DNA,比較對照試樣與測試樣品中存在之GAVE8蛋白 質、傳訊RNA或基因體DNA。 本發明亦包含偵測生物樣品中GAVE8之組套。該組套 可用於測定患者是有患有與異常的GAVE8表現相關的病症 (例如免疫的病症)或有增加發展該病症之風險。例如,該組 套可包含能偵測生物樣品中GAVE8蛋白質或傳訊RNA之 標記的化合物或藥劑以及決定樣品中G A\/ E 8含量之方法( 例如:抗-GAVE8抗體或結合至DNA編碼GAVE8之寡核苷 酸探針’例如序列確認號碼:1 )。該組套亦可包括解釋測 試患者患有或發展與GAVE8異常表現相關之病症的風險之 說明(若GAVE8蛋白質·或傳訊RNA之含量高於或低於正常 的水準)。 於抗體組套中,組套可包含例如:(1)結合至GAVE8 (請先閲讀背面之注意事項再填寫本頁) 0, 裝 f 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -71 - 1250209 ΑΊ 五、發明説明( 蛋白質之第一抗體(例如附著至固體支持物);以及(可視需 要)(2)聯結可偵測的藥劑之第二種結合至GAVE8蛋白質之 不同的抗體或第一抗體的抗體。 寡核苷酸組套中,組套可包含例如:(1 )雜交至 GAVE8核酸序列之寡核苷酸(例如可偵測標記的寡核苷酸) 或(2)—對用於放大GAVE8核酸分子之引子。 組套亦可包含,例如:緩衝藥劑、防腐劑或蛋白質安 定劑。組套亦可包含偵測可偵測藥劑(例如酵素或受質)的必 須成份。組套亦可含有對照試樣或可測定及比較內含測試 樣品之一系列之對照試樣。組套之各成份通常密封於個別 地容器內,單一的包裝內可含有所有之各種容器以及測試 患者是否患有或有發展與異常的G A V E 8表現相關的病症之 風險的說明書。 2.預測測定 在此描述之方法更可進一步的作爲診斷的或預測測定 ,以確認患有或有發展與異常的GAVE8表現或活性相關的 病症之風險的病患。例如在此描述之測定,例如前診斷測 定或後測定,可用以確認患有或有發展與異常的GAVE8蛋 白質、核酸表現或活性相關的病症之風險的患者,例如免 疫系統或神經系統的病症,例如與多發性硬化症開始作用 相關的免疫反應。此外,預測測定可用以確認患有或有發 展與異常的G A\/ E 8表現或活性相關的病症之風險的患者。 因此,本發明提供一種方法,其中測試樣品係得自患者並 本纸張尺度適用中國國家標準(CNS ) A4規格(2】0X297公釐) ^~ -72- (請先閲讀背面之注意事項再填寫本頁) -裝- 經濟部智慧財產局員工消費合作社印製 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(g 偵測GAVE8蛋白質或核酸(例如:傳訊RNA、基因體DNA) ,若有GAVE8蛋白質或核酸之存在則可診斷出患者患有或 有發展與異常的G A V E 8表現或活性相關的病症之風險。本 文之"測試樣品"意指得自患者的生物樣品。例如,測試樣品 可爲生物的體液(例如血淸)、細胞樣品或組織。此外,在此 描述之預測測定可用於測定患者是否可投用藥劑(例如:促 效劑、拮抗劑、擬肽的,蛋白質、肽、核酸、小分子或其它 候選藥物)治療與異常的GAVE8表現或活性相關的病症。 例如,該方法可用於測定患者是否可用特定的藥劑或藥劑 群(例如降低GAVE8活性之藥劑)有效地進行治療。因此, 本發明提供方法(得到測試樣品、偵測GAVE8蛋白質或核 酸),來決定患者是否可用藥劑有效地治療與異常的GAVE8 表現或活性相關的病症,(例如,若存在G AV E 8蛋白質或 核酸,則可診斷出此患者可投用藥劑治療與異常的GAVE 8 表現或活性相關的病症)。 本發明方法亦可用以偵測GAVE8基因之基因損害或突 變’從而決定有損害基因之患者是否有其特徵在於異常的 細胞增殖及/或分化的病症之風險。較佳的具體實施例中, 本方法包括偵測患者的細胞樣品中,是否至少具有一個其 特徵在於可影響編碼GAVE8-蛋白質基因之完整性、或使 GAVE8基因表現失常之基因損害或突變存在。例如,該基 因的損害或突變之確認方法是偵測是否存在至少一種以下 之·· 1)GAVE8基因之一個或多個核苷酸的刪除;2)GAVE8 基因加入一個或多個核苷酸;3) G A V E 8基因中取代一個或 本纸張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) (請先閲讀背面之注意事項再填寫本頁) mr 裝. 訂 -73- 1250209 經濟部智慧財產局員工消費合作社印製 A7 ___B7__五、發明説明(71) 多個核苷酸;4)GAVE8基因之染色體重排作用;5)改變 GAVE8基因傳訊RNA轉錄本之含量;6)GAVE8基因異常 的修飾,例如基因體DNA之甲基化作用模式;7)GAVE8基 因之傳訊RNA轉錄本有非野生型接合模式之存在;8)非野 生型之GAVE8-蛋白質;9)GAVE8基因對偶基因的流失; 以及1 0)GAVE8蛋白質不適當的後轉譯修飾。如本文之描 述,有許多技藝上已知的測定技藝可偵測GAVE8基因之損 害。較佳的生物樣品是分離自患者之周邊血液白血球樣品 〇 在某些具體實施例中,偵測損害之技藝包含使用探針/ 引子之聚合酶連鎖反應(PC R)(參閱例如:美國專利第 4,683,1 95 及 4,683,202 號),例如定錨 PCR 或 RACE PCR 或聯結連鎖反應(LCR)(參閱例如:Landegran et al., Science (1 988) 241:1 077-1 080; and Nakazawa et al·, Proc Natl Acad Sci USA (1994) 91:360-364),後者尤其是 可用於偵測G A V E 8基因之點突變(參閱例如:a b r a v a y a e t a I., Nucleic Acids Res (1 995) 23:675-682)。本方法之步 驟包括從病患收集細胞樣品,從細胞樣分離核酸(例如:基 因、傳訊R N A或一者)’接觸核酸樣品與一個或多個在雜交 及GAVE8基因放大之條件下可特別地雜交至GAVE8基因 之引子,偵測放大產物是否存在,或偵測放大產物之大小 並與對照試樣之長度比較。預期P C R及/或L C R可用於初 步的放大步驟,並與在此描述的任何偵測突變之技藝合倂 使用。 (請先閲讀背面之注意事項再填寫本頁) 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -74 - 1250209 經濟部智慧財產局員工消費合作社印製 A7 ____ B7五、發明説明( 另一放大方法包括:自我維持之序列複製(Guate||i et al.,Proc Natl Acad Sci USA(1990)87 : 1874-1878)、轉錄 的放大系統(Kwoh et a|., PrC)C Natl Acad Sci USA( 1 9 89)86 : 1 1 73-1 1 77)、Q -万複製酶(Uzardi et al., Bio/Technology (1 988) 6:1197)、或任何其它核酸放大方 法,接著使用熟悉此技藝的專業人士熟知的技藝偵測放大 的分子。偵測技藝尤其是可用於偵測到核酸分子(若該分子 的存在量非常低)。 另一具體實施例中’樣品中GAVE 8基因之突變可用限 制酶切除圖樣之改變加以確認。例如,分離樣品及對照組 D N A,放大(可視需要),用一種或多種限制內核酸酶水解, 用膠體電泳測定及比較斷片長度大小。樣品及對照組D N A 之間斷片長度大小之差異則代表樣品D N A中有突變存在。 此外,使用序列專一的核糖酶(參閱例如:美國專利第 5,498,531號)檢查是否產生或喪失核糖酶切除位點,可測 定特定突變的存在。 其它具體實施例中GAVE8基因的突變可用樣品及對照 組核酸(例如:DNA或RNA)與內含上百或成千之寡核苷酸 探針之高密度陣列雜交而加以確認(Cronin et al.,Human Mutation (1 996) 7:244-255; Kozal et al·, Nature Medicine (1996) 2:753-759)。例如,GAVE8 的基因突變可 用內含產生光的D N A探針之二維陣列加以確認(描述於 Cmniri et al., supra)。簡言之,第一雜交探針陣列可用以 掃描樣品中伸長之D N A並用連續的重疊探針經由產生之線 本纸張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) (請先閲讀背面之注意事項再填寫本頁) -裝_P Pack· Ministry of Economic Affairs Intellectual Property Bureau g (Working Consumer Cooperatives Printed -66 - 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 5, Invention Description (64) Represents a part of the human genome. The sequence coding area can Some mutations in the dual gene occur, and the non-coding region can undergo a large degree of variation. It is estimated that the frequency of mutation of the even gene between humans occurs approximately 500 bases. The sequences described herein are to some extent. It can be used as a standard sample for the identification of individual DNA. Because a large number of polymorphisms can occur in non-coding regions, fewer sequences can be used to distinguish individuals. Sequence confirmation number: 1 non-coding sequence can provide a group of 1〇 to 1,000 Primers that can be amplified to produce 100 kb bases of uncoded sequences for positive personal identification. If a predicted coding sequence, such as sequence confirmation number: 1, is used, it is more appropriate to perform positive individual identification. The number of primers is 500-2,000. If a set of reagents in the GAVE8 sequence described herein is used to generate a database for personal identification, then the same test It can be used later to identify individual organizations. Using a unique identification database, positive identification of individuals (whether dead or alive) can be performed from very small tissue samples. 3. Use of GAVE8 sequences in forensic biology. A-identification techniques can also be used in forensic biology. Forensic biology is the scientific field of positive confirmation (such as the perpetrator) using biological evidence of the genetics found in crimes. This identification can be performed using criminal techniques from crime.埸 Find samples of very small organisms collected, such as tissues, such as hair or skin, or body fluids, such as blood, saliva, or semen, to amplify the DNA sequence. The amplified sequence can then be compared to a standard sequence to identify Source of the biological sample. The sequence of the present invention can be used to provide a polynucleotide reagent, for example, the size of the PCR paper is applicable to China"^^ (CNS) A4 specification (2) OX 297 mm) (please read the back note first) Matters fill out this page) 0, Loading - order f -67- 1250209 A7 B7 V. Description of the invention (sub, calibrating the human genome-specific locus, which can enhance D The reliability of NA forensic identification, for example, provides another "identification mark" (ie, a unique DNA sequence of another particular individual). As described above, the actual base sequence data can be formed by restriction enzymes producing fragments. Accurate another pattern for identification. Calibration sequence confirmation number: 1 sequence of non-coding regions, especially suitable for generating a large number of polymorphisms, so it is easier to distinguish individuals using the technology of this non-coding region. Examples of reagents include the GAVE8 sequence or a portion thereof, such as a fragment having a non-coding region of at least 20 or 30 bases in length from the sequence confirmation number: 1. The GAVE8 sequences described herein can be used to further provide polynucleotide reagents, such as labeled or labelable probes, which can be used, for example, in situ hybridization techniques to identify a particular tissue, such as brain tissue. This technique is very useful when forensic pathologists face organizations of unknown origin. The GAN/E8 probe can confirm tissue via a panel of species and/or organ type. In a similar method, contaminated tissue cultures can be screened with reagents (e. g., G A V E 8 primers or probes) (i.e., screened in culture mixtures of different cell types). B. Predictive Drugs The present invention is also directed to the field of predictive drugs in which individual testing can be performed using diagnostic assays, predictive assays, pharmacogenetics, and clinical monitoring. Accordingly, one of the features of the present invention relates to the determination of a diagnosis to determine the activity of GAVE8 protein and/or nucleic acid and the activity of GAVE8 'from biological samples (eg, blood, urine, sputum, blood stasis, cells, This paper scale applies to China National Standard (CNS) A4 specification (210X297 mm) (please read the note on the back and fill out this page) - Install - , 11 Ministry of Economic Affairs Intellectual Property Bureau 8 Workers Consumption Cooperative Printed -68- 1250209 A7 B7 V. Description of the invention (^ tissue) Determination of whether an individual has a disease or condition associated with abnormal GAVE8 expression or activity, or a risk of developing a disorder. The present invention also provides predictive assays to determine whether an individual has development and The risk of a GAVE8 protein, nucleic acid expression or activity-related disorder. For example, a mutation in the G.AVE8 gene can be determined in a biological sample. This assay can be used for the purpose of prediction, and thus the individual is characterized in or associated with GAVE8 protein, nucleic acid. Preventive treatment is performed prior to the onset of a manifestation or activity of the disorder. Another feature of the invention is to provide a method for determining GAVE8 protein in an individual. The nucleic acid is expressed or the activity of GAVE8, thereby selecting an appropriate therapeutic or prophylactic agent (herein referred to as "pharmaceutical genetics"). Pharmacogenetics can select a therapeutic or prophylactic agent for treating a patient based on the genotype of the patient. (For example, examining a patient's genotype and determining the patient's ability to respond to a particular agent.) Another feature of the invention relates to monitoring the effect of a clinically tested agent (e.g., drug or other compound) on GAVE8 performance or activity. The agents and other agents of the present invention are described in further detail in the next chapter. 1. Diagnostic assays A typical method for detecting the presence or absence of GAVE8 in a biological sample comprises: obtaining a biological sample from the test patient, and applying the biological sample to the detectable A GAVE8 protein or a compound or agent that encodes a nucleic acid encoding a GAVE8 protein (eg, a signaling RNA, a genomic DNA) is contacted to detect GAVE8 present in a biological sample. A preferred agent for detecting GAVE8 signaling RNA or genetic DNA is capable Labeled nucleic acids that hybridize to GAVE8 signaling RNA or genomic DNA. This paper scale applies to the Chinese National Standard (CNS) A4 specification. (210X297 mm) (Please read the note on the back and fill out this page) Packing · 1 Economic Intelligence Bureau Intellectual Property Office Staff Cooperatives Printed -69- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed V. DESCRIPTION OF THE INVENTION (Probe. The nucleic acid probe may be, for example, a full-length GAVE8 nucleic acid, such as a nucleic acid of sequence number: 1 or a portion thereof, for example at least 15, 5, 50, 100 ' 2 50 or 500 nucleotides in length Oligonucleotides, and under stringent conditions, are sufficient to specifically hybridize to GAVE8 signaling RNA or genomic DNA. Other suitable probes to which the present invention is applied for diagnostic assays will be described herein. A preferred agent for detecting the GAVE8 protein is an antibody that binds to the GAVE8 protein. Preferably, the antibody has a detectable label. The antibody may be a plurality of antibodies or a better monoclonal antibody. An intact antibody, or a fragment thereof (e.g., Fab or F(at)2) can be used. "Labeled" with respect to a probe or antibody, as used herein, includes a coupled (ie, physically linked) detectable substance to a probe or antibody directly labeled probe or antibody, and reacts with another reagent that is directly labeled. An inscribed labeled probe or antibody. Examples of indirect labeling include the use of fluorescently labeled secondary antibodies to detect primary antibodies and DNA probes that use terminally labeled biotin, and thus can be detected using fluorescently labeled streptavidin. The term "biological sample" as used herein includes: body fluids isolated from the tissues, cells, and organisms of the patient, as well as tissues, cells, and body fluids in the patient's body. The detection method of the present invention can be used to detect G A V E 8 in the living body and in vitro to detect R N A, protein or gene 〇 N A . For example, the technique of detecting G AV E 8 signaling R N A in vivo includes: northern hybridization and in situ hybridization. The technology for detecting GAVE8 protein in vitro includes: enzyme-linked immunosorbent assay (enzyme-linked immunosorbent assay), Western blotting, immunoprecipitation, and immunofluorescence. The in vitro technique for detecting the GAVE8 gene D N A includes Southern hybridization. In addition, the in vivo technique of detecting GAVE8 protein includes the introduction of labeled anti-resistance to patients (please read the note on the back and fill out this page). - _ f This paper scale applies to Chinese National Standard (CNS) A4 specification (210X) 297 public f ) -70- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention description (d GAVE8 antibody. For example, the antibody can label the radioactive label and use standard imaging techniques to detect the position in the patient In one of the specific embodiments, the biological sample containing the protein molecule can be obtained from the test patient. Further, the biological sample containing the signaling RNA molecule can be obtained from the test patient or the genetic DNA molecule can be obtained from the test patient. The biological sample is a peripheral blood leukocyte sample isolated from the patient by a general method. In another specific embodiment, the method further comprises obtaining a biological sample of the control group from the control group, contacting the control sample and detecting the GAVE 8 protein. a compound or agent that signals RNA or genomic DNA to detect GAVE8 protein and signaling RNA present in biological samples. Or genomic DNA, comparing the GAVE8 protein, the signaling RNA or the genomic DNA present in the control sample and the test sample. The invention also includes detecting a set of GAVE8 in the biological sample. The set can be used to determine whether the patient has a disease. A condition associated with abnormal GAVE8 expression (eg, an immune condition) may increase the risk of developing the condition. For example, the set may include a compound or agent that detects a marker of GAVE8 protein or signaling RNA in a biological sample and determines the sample. a method for the content of GA\/E 8 (for example: an anti-GAVE8 antibody or an oligonucleotide probe that binds to DNA encoding GAVE8) such as sequence confirmation number: 1). The kit may also include an explanation of the test patient suffering from or Description of the risk of developing a condition associated with GAVE8 abnormality (if the level of GAVE8 protein or signaling RNA is above or below normal). In an antibody set, the set may contain, for example: (1) binding to GAVE8 (Please read the notes on the back and fill out this page) 0, Install f This paper scale applies to Chinese National Standard (CNS) A4 specification (210X 297 mm) -71 - 1250209 ΑΊ V. Description (the first antibody to the protein (eg, attached to the solid support); and (as needed) (2) the second antibody that binds to the detectable agent to the different antibody or first antibody of the GAVE8 protein. In a set of nucleotides, the set may comprise, for example: (1) an oligonucleotide that hybridizes to a GAVE8 nucleic acid sequence (eg, a detectably labeled oligonucleotide) or (2) to amplify a GAVE8 nucleic acid molecule. The kit may also contain, for example, a buffering agent, a preservative or a protein stabilizer. The kit can also contain the necessary ingredients to detect detectable agents such as enzymes or receptors. The kit may also contain a control sample or a control sample that can measure and compare a series of test samples. The components of the kit are typically sealed in separate containers, and a single package can contain all of the various containers and instructions for testing whether the patient has or is at risk of developing a condition associated with abnormal G A V E 8 performance. 2. Predictive assays The methods described herein are further useful as diagnostic or predictive assays to identify patients with or at risk of developing a disorder associated with abnormal GAVE8 performance or activity. For example, assays described herein, such as pre-diagnostic assays or post-assays, can be used to identify patients suffering from or at risk of developing a disorder associated with a disordered GAVE8 protein, nucleic acid expression or activity, such as a condition of the immune system or the nervous system, For example, an immune response associated with the onset of multiple sclerosis. In addition, predictive measures can be used to identify patients who are at risk of developing or having a condition associated with abnormal G A/E 8 performance or activity. Therefore, the present invention provides a method in which a test sample is obtained from a patient and the paper size is applied to the Chinese National Standard (CNS) A4 specification (2] 0×297 mm) ^~ -72- (please read the notes on the back first) Fill in this page) - Install - Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 5, Invention Description (g Detects GAVE8 protein or nucleic acid (eg, communication RNA, genomic body) DNA), if present in the presence of a GAVE8 protein or nucleic acid, can diagnose a patient with or at risk of developing a condition associated with abnormal GAVE 8 performance or activity. "Test sample" in this article means a patient-derived organism. Samples. For example, the test sample can be a biological fluid (eg, blood sputum), cell sample, or tissue of a living being. In addition, the predictive assays described herein can be used to determine whether a patient can administer an agent (eg, an agonist, antagonist, Peptides, proteins, peptides, nucleic acids, small molecules or other drug candidates) treat conditions associated with abnormal GAVE8 expression or activity. For example, the method is available Determining whether a patient can be effectively treated with a specific agent or group of agents (eg, an agent that reduces GAVE8 activity). Accordingly, the present invention provides a method (a test sample, a GAVE8 protein or a nucleic acid is detected) to determine whether a patient is effectively available. Treating a condition associated with abnormal GAVE8 expression or activity, (eg, if a G AV E 8 protein or nucleic acid is present, it can be diagnosed that the patient can administer the agent to treat a condition associated with abnormal GAVE 8 expression or activity). The method of the invention can also be used to detect genetic damage or mutations in the GAVE8 gene to determine whether a patient having a damaged gene has a risk of a disorder characterized by abnormal cell proliferation and/or differentiation. In a preferred embodiment, the method Including detecting whether a cell sample of a patient has at least one gene damage or mutation characterized by affecting the integrity of the gene encoding the GAVE8-protein or causing the GAVE8 gene to be abnormal. For example, confirmation of damage or mutation of the gene The method is to detect whether there is at least one of the following: 1) one of the GAVE8 genes Or deletion of multiple nucleotides; 2) addition of one or more nucleotides to the GAVE8 gene; 3) substitution of one of the GAVE 8 genes or the paper size applicable to the Chinese National Standard (CNS) A4 specification (210X297 mm) ( Please read the notes on the back and fill out this page. mr Pack. Order -73- 1250209 Ministry of Economic Affairs Intellectual Property Office Staff Consumer Cooperative Print A7 ___B7__ V. Invention Description (71) Multiple Nucleotides; 4) GAVE8 Gene Chromosomal rearrangement; 5) altering the content of GAVE8 gene signaling RNA transcript; 6) modification of GAVE8 gene abnormality, such as methylation pattern of genomic DNA; 7) GAVE8 gene signaling RNA transcript has non-wild type The presence of the junction pattern; 8) non-wild type GAVE8-protein; 9) loss of the GAVE8 gene dual gene; and 10) inappropriate post-translational modification of the GAVE8 protein. As described herein, there are a number of techniques known in the art for detecting damage to the GAVE8 gene. A preferred biological sample is a peripheral blood leukocyte sample isolated from a patient. In some embodiments, the technique for detecting damage comprises polymerase chain reaction (PC R) using a probe/introduction (see, for example, U.S. Patent No. 4,683,1 95 and 4,683,202), such as anchor PCR or RACE PCR or linkage chain reaction (LCR) (see for example: Landegran et al., Science (1 988) 241:1 077-1 080; and Nakazawa et al· Proc Natl Acad Sci USA (1994) 91:360-364), the latter especially for point mutations that can be used to detect the GAVE 8 gene (see for example: abravayeta I., Nucleic Acids Res (1 995) 23: 675-682) . The steps of the method comprise collecting a cell sample from a patient, and isolating the nucleic acid (eg, gene, signaling RNA or one) from the cell sample. The contact nucleic acid sample can specifically hybridize with one or more of the hybridization and GAVE8 gene amplification conditions. To the primer of the GAVE8 gene, the presence or absence of the amplified product is detected, or the size of the amplified product is detected and compared with the length of the control sample. It is contemplated that P C R and/or L C R can be used in the initial amplification step and used in conjunction with any of the techniques described herein for detecting mutations. (Please read the precautions on the back and fill out this page.) The paper size applies to the Chinese National Standard (CNS) A4 specification (210X 297 mm) -74 - 1250209 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printed A7 ____ B7 V. DESCRIPTION OF THE INVENTION (Another method of amplification includes: self-sustained sequence replication (Guate||i et al., Proc Natl Acad Sci USA (1990) 87: 1874-1878), transcriptional amplification system (Kwoh et a|., PrC) C Natl Acad Sci USA (1 9 89) 86 : 1 1 73-1 1 77), Q-Wan replicase (Uzardi et al., Bio/Technology (1 988) 6:1197), or any other nucleic acid amplification The method then detects the amplified molecules using techniques well known to those skilled in the art. Detection techniques are especially useful for detecting nucleic acid molecules if the amount of the molecule is very low. In another embodiment, the mutation of the GAVE 8 gene in the sample can be confirmed by limiting the change in the enzyme excision pattern. For example, the sample and the control group D N A are separated, amplified (as needed), hydrolyzed with one or more restriction nucleases, and the fragment length is determined and compared by colloidal electrophoresis. The difference in the length of the fragment between the sample and the control group D N A represents the presence of a mutation in the sample D N A . In addition, the presence of a specific mutation can be determined by using a sequence-specific ribozyme (see, e.g., U.S. Patent No. 5,498,531) to examine whether a ribozyme excision site is produced or lost. In other embodiments, mutations in the GAVE8 gene can be confirmed by hybridization of a sample and control nucleic acid (eg, DNA or RNA) to a high density array containing hundreds or thousands of oligonucleotide probes (Cronin et al. , Human Mutation (1 996) 7: 244-255; Kozal et al., Nature Medicine (1996) 2: 753-759). For example, a genetic mutation in GAVE8 can be confirmed using a two-dimensional array of D N A probes that produce light (described in Cmniri et al., supra). Briefly, the first hybridization probe array can be used to scan the elongated DNA in the sample and apply the Chinese National Standard (CNS) A4 specification (210X 297 mm) via the generated line paper size with continuous overlapping probes. Read the notes on the back and fill out this page) - Install _
、1T f -75- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明( 性的排列確認鹼基之間的改變。該步驟可鑑定點突變。該 步驟後接著使用互補至所有偵測到之變型或突變的較小的 、特化的探針陣列進行第二雜交排列鑑定特定的突變。各 突變陣列由平行的探針組合組成,一個探針可互補至野生 型基因,另一個互補至突變基因。 另一具體實施例中,可用技藝上已知的任何各種定序 反應直接序列分析GAVE8基因並比較樣品之GAVE8序列 與對應的野生型對照組序列以偵測突變。定序反應之實施 Ί列包括 Maxim & Gilbert(Proc Natl Acad Sci USA(1977)74 :560)或 Sanger(Proc Natl Acad Sci U SA( 1 977)74 : 5463)發展之技藝。亦可考慮任何各種自動化的定序程序進 行診斷的測定(Bio/Techniques( 1 995) 1 9 ·· 448),包括質譜 分析法定序(參閱例如:PCT公布號碼 WO94/16101 ; Cohen et a I., Ad v Chromatogr(1996)36 : 127-162;以及 Griffin et a I., App I Biochem Biotechnol( 1 993)38 : 1 47-159)。 偵測GAVE8基因突變的其它方法包括:用藥劑保護以 避免切除之方法,用以偵測 RNA/RNA或RNA/DNA異源雙 鏈體中配對錯誤的鹼基(Myers et al.,Science(1985)230: 1 242)。一般而言,’’配對錯誤切除"技術可經雜交內含野生 型GAVE8序列之(標記的)RNA或DNA與得自組織樣品之 可能地突變RNA或DNA以形成異源雙鏈體。雙股的雙鏈 體可用切開雙鏈體中對照組及樣品股之間由於鹽鹼基對配 對錯誤而存在之單股區域的藥劑進行反應。RN A/D NA雙鏈 (請先閱讀背面之注意事項再填寫本頁), 1T f -75- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 5, Invention Description (Sexual alignment confirms the change between bases. This step can identify point mutations. This step is followed by complementary to all Smaller, specialized probe arrays that detect variants or mutations perform a second hybridization sequence to identify specific mutations. Each mutant array consists of a combination of parallel probes, one probe complementary to the wild-type gene, and the other One complementary to the mutated gene. In another embodiment, the GAVE8 gene can be directly sequenced using any of a variety of sequencing reactions known in the art and the GAVE8 sequence of the sample can be compared to the corresponding wild type control sequence to detect the mutation. The implementation of the reaction includes the development of Maxim & Gilbert (Proc Natl Acad Sci USA (1977) 74: 560) or Sanger (Proc Natl Acad Sci U SA (1 977) 74: 5463). Any various automation can also be considered. The sequencing procedure for the determination of the diagnosis (Bio/Techniques (1 995) 1 9 · 448), including the mass spectrometry legal sequence (see, for example, PCT publication number WO94/16101; Cohen et a I., Ad v Chromatogr (1996) 36: 127-162; and Griffin et a I., App I Biochem Biotechnol (1 993) 38: 1 47-159). Other methods for detecting mutations in the GAVE8 gene include: A method of protection against excision to detect mismatched bases in RNA/RNA or RNA/DNA heteroduplexes (Myers et al., Science (1985) 230: 1 242). In general, ' The 'pairing error resection" technique can hybridize a (marked) RNA or DNA containing a wild-type GAVE8 sequence to a possibly mutated RNA or DNA derived from a tissue sample to form a heteroduplex. It is possible to react the single-stranded region between the control group and the sample strands due to the mismatch of the salt base pair in the split duplex. RN A/D NA double strand (please read the back note first and then fill in the page) )
本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -76- 1250209This paper scale applies to the Chinese National Standard (CNS) A4 specification (210X 297 mm) -76- 1250209
體可用RNA酶水解切開配對錯誤的區域、dna/dna雜種 可用S彳核酸酶水解切開配對錯誤的區域。其它具體實施 例中DNA/DNA或RNA/DNA雙鏈體可用.羥胺或四氧化餓及 /、氫D比|]疋反應水解切開配對錯誤的區域。於水解切開配對 錯誤的區域之後,可將產生的材料用變性的聚丙烯醯胺凝 膠依大小分離測定突變位點。參閱例如:Cotton et al., Proc Natl Acad Sci USA (1 988) 85:4397; Saleeba et al.,The RNase can be used to hydrolyze and cleave the mismatched region, dna/dna hybrids. S彳 nuclease can be used to hydrolyze and cleave the mismatched region. In other embodiments, the DNA/DNA or RNA/DNA duplex can be hydrolyzed to cut the mismatched region by hydroxylamine or tetraoxide and/or hydrogen D. After hydrolyzing the paired erroneous region, the resulting material can be separated by size using a denatured polyamidoamide gel to determine the mutation site. See, for example, Cotton et al., Proc Natl Acad Sci USA (1 988) 85:4397; Saleeba et al.,
Methods Enzymol (1 992) 21 7:286-295。較佳的具體實施 例中可標記對照組D ΝΑ或RNA進行偵測。 於另一具體實施例中,在指定系統中配對錯誤切除反 應可使用一種或多種識別雙股D N A中配對錯誤之鹼基對的 蛋白質(所謂的"DNA配對錯誤修護"酵素),偵測及圖譜定 位得自細胞樣品之GAVE8互補DNA中之點突變,例如大 腸桿菌之mutY酵素可在G/A配對錯誤時切開A,HeLa 細胞之胸腺嘧啶 D N A糖基酶可在G/T配對錯誤時切開 T ( H s u et a I., Carcinogenesis (1 9 9 4)1 5 : 1657-1662)。依 據典型的具體實施例,基於G A V E 8序列之探針(例如野生 型GAVE8序列)可雜交至測試細胞之互補DNA或其它DNA 產物。DNA配對錯誤修護酵素處理的雙鏈體,及切除產物 ,可用電泳等方法偵測。參閱例如:美國專利第5,459,039 號。 其它具體實施例之一中,可用電泳移動性之改變確認 GAVE8基因突變。例如可使用單股構像多形性(SSCP)偵測 突變及野生型核酸之間電泳移動性的差異(Orita et al., 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) (請先閲讀背面之注意事項再填寫本頁) •裝. 經濟部智慧財產局員工消費合作社印製 -77- 經濟部智慧財產局員工消費合作社印製 1250209 A7 B7 五、發明説明(^ Proc Natl Acad Sci USA (1 989) 86:2766 ;亦可參閱 Cotton, Mutat Res (1 993) 285: 1 25-1 44; H a y a s h i, Genet Anal Tech Appl (1 992) 9:7 3-7 9)。將樣品之單鏈 DNA 斷片 及對照組G A V E 8核酸變性並回復本性。依據序列之不同產 生各種不同之單股核酸二級結構,即使單一的鹼基改變在 電泳移動性上產生的改變亦能夠加以偵測。可標記D N A斷 片或用標記的探針進行偵測。可使用RNA(而不是DNA)增 強測定敏感度,因爲其序列對二級結構之改變更敏感。較 佳的具體實施例中主要是使用雜雙鏈體分析法以電泳移動 性的改變分離雙股的雙鏈體分子(Keen et al.,Trends Genet (1 991 ) 7: 5) ° 另一具體實施例中,可使用內含變性劑梯度之聚丙烯 • 醯胺凝膠進行變性梯度膠體電泳(DGGE)測定突變或野生型 斷片之移動(Myers et al·,Nature (1 985) 31 3:495)。當進 行D GG E方法分析時,先修飾D ΝΑ以確保不完全地變性, 例如用P C R加入大約40個鹼基之富含G C之高熔點D N A 之GC夾。進一步的具體實施例中,可使用溫度梯度代替 變性梯度確認對照組及樣品樣品 D N A移動性的差異 (Rosenbaum et al., Biophys Chem (1 987) 265:1 2753)° 其它偵測點突變技藝之實施例包括(但非限於):選擇 的寡核苷酸雜交、選擇的放大或選擇的引子延伸。例如可 製備寡核苷酸引子,其中將已知的突變置於中央,然後在 容許理想配對之雜交條件下雜交至目標DNA(Saiki et al_, Nature (1 986) 324:1 63) ; Saiki et al., Proc Natl Acad Sci (請先閱讀背面之注意事項再填寫本頁) 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -78- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(g USA(1 989)86 : 6230)。當寡核苷酸附著至雜交膜且與標記 的目標DNA雜交時,該對偶基因專一的寡核苷酸可雜交至 PCR放大的目標DNA或許多不同突變。 此外,選擇性P C R放大之對偶基因專一的放大技藝可 與本發明合倂使用。進行專一性放大的寡核苷酸引子在分 子中心或在引子的 3’遠端可帶有重要的突變(而使放大取 決於雜交之差異)(Gibbs et al.,Nucleic Acids Res (1989) 1 7:243 7-244 8),在適當的條件下,配對錯誤可預防或降低 聚合酶延伸(Prossner,Tibtech(1 993)1 1 : 238)。此外,在 突變的區域可令人滿意的引進新穎的限制點以進行鹼基切 除偵測(Gasparini et al·,Mol Cell Probes (1992) 6:1)〇 在 某些具體實施例中,亦可使用 Taq 連接酶進行放大 (Barany, Proc Natl Acad Sci USA (1 991 ) 88:189)。在此 案例中,只有在特定的位點存在已知的突變時,5’序列之 3^端才會進行理想配對,並發生聯結作進,而以放大之存在 與否進行偵測。 進行在此描述之方法,例如可利用包含至少一個核酸 探針或抗體試劑之前包裝的診斷組套,方便地利用包含 GAVE8基因症狀或該疾病或疾病類群病史之病人的臨床的 設定數據進行疹斷。 此外,可使用表現GAVE8的任何細胞類型或組織進行 在此描述之預測測定。 3.藥物遺傳學 (請先閱讀背面之注意事項再填寫本頁) -裝· 、-口 f 本纸張尺度適用中國國家標準(CMS ) A4規格(210X 297公釐) -79- 1250209 A7 ____B7 五、發明説明( (請先閲讀背面之注意事項再填寫本頁) 經在此描述之篩選測定確認之對GAVE8活性(例如 GAVE8基因表現)具有朿fj激或抑制效應之藥齊[J、或調節齊ij, 可投用至病人以治療(預防上地或治療上)與GAVE8活性相 關的病症(例如包括,但非限於,相關於多發性硬化症的免 疫反應)。合倂使用該治療要考慮到個體之藥物遺傳學(即硏 究病人病人之基因型及病人對外來化合物或藥物的反應之 間的關係)。治療劑代謝之差異可造成劑量與血液濃度中藥 理上活性的藥物間關係的改變,可導致嚴重的毒性或治療 上的成敗。因此,病人之藥物遺傳學係基於病人之基因型 選擇有效的藥劑(例如藥物)進行預防性的或治療的治療或測 試。進一步的該藥物遺傳學可用於測定適當的劑量及治療 的療程。據此,可測定病人GAVE8蛋白質之活性、GAVE8 核酸之表現或GAVE8基因之突變量,從而選擇適當的藥劑 對病人進行治療的或預防性的治療。 由於藥物遺傳學可使病人在藥物淸除及異常的作用上 發生改變,所以在臨床上是藥物反應顯著的遺傳變數。參 閱例如:Under, Clin Chem( 1 997)43(2) : 254-2 66。一般 經濟部智慧財產局員工消費合作社印製 而言,二種藥物遺傳學狀況之型態是可以區分的。單一因 子的基因傳輸狀況可改變藥物在身體上之作用方式,稱爲” 改變之藥物作用”。單一因子的基因傳輸狀況可改變藥物在 身體上之作用方式,稱爲"改變之藥物代謝·’。藥物遺傳學的 狀況可爲少見的缺陷或多型現象。例如6-磷酸蔔萄糖脫氫 酶缺乏症(GOD或蠢豆病)是一般遺傳上的酵素病,其中主 要的臨床的倂發症是於攝取氧化劑藥物(抗瘧疾藥物、磺酸 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公麓) -80- 1250209 kl B7 經濟部智慧財產局員工消費合作社印製 五、發明説明( 類藥物、止痛藥、硝基呋喃)及食用蠶豆之後發生溶血。 在說明的具體實施例中,藥物代謝酵素之活性是決定 藥物作用強度及持續期間的主要因子。發現藥物代謝酵素( 例如N-乙醯基轉移酶 2(ΝΑΤ2)及細胞色素 P450酵素、 C.YP2D6及CYP2C19)之遺傳多型性可解釋爲什麼一些病人 沒有預期的藥物效應或顯示擴大的藥物反應以及服用標準 及安全劑量的藥物之後會有嚴重的毒性。多型現象是族群 中表現的二種表現型,分別爲廣泛的代謝者(Ε Μ)及不良的 代謝者(ΡΜ)。ΡΜ之流行率在不同族群之中並不相同。例如 ,編碼CYP2D6之基因爲高度多形的基因,在ΡΜ中已確 認許多突變,所有突變均可導致缺少功能性的 C 丫 Ρ 2 D 6。 當彼服用標準劑量時,CYP2D6及CYP2C1 9的不良代謝者 經常有擴大藥物反應及副作用之經歷。若代謝物是活性的 治療部份(例如可待因鹼之鎭痛效應受到CYP2D6形成之代 謝物(嗎啡)之調節),則ΡΜ將顯示無治療的反應。其他的 極端例子是所謂的超快速代謝者,彼對標準劑量無反應。 最近,已確認超快速代謝在分子上是由於CYP2D6基因擴 增。 因此,可測定GAVE8蛋白質之活性、GAX/E8核酸之 表現或病人GAVE8基因之突變量,從而選擇適當的藥劑對 病人進行治療的或預防性的治療。此外,藥物遺傳學的硏 究可用於編碼藥物代謝酵素多形的對偶基因之基因分類, 以鑑定病人藥物反應之表現型。將該知識應用在投服藥物 或藥物選擇時(例如用在此描述之一種典型的篩選測定確認 (請先閲讀背面之注意事項再填寫本頁) if 裝· 訂Methods Enzymol (1 992) 21 7:286-295. In a preferred embodiment, the control D ΝΑ or RNA can be labeled for detection. In another embodiment, the paired error resection reaction in the designated system may use one or more proteins that recognize pairs of mismatched base pairs in the double-stranded DNA (so-called "DNA pairing error repair" enzymes), Measure and map the point mutations from the GAVE8 complementary DNA of the cell sample. For example, the mutY enzyme of E. coli can cut A when the G/A pairing error occurs, and the thymidine DNA glycosylase of HeLa cells can be mismatched in G/T. T (H su et a I., Carcinogenesis (1 9 9 4) 1 5 : 1657-1662). According to a typical embodiment, a probe based on the G A V E 8 sequence (e.g., the wild-type GAVE8 sequence) can hybridize to complementary DNA or other DNA products of the test cells. The DNA pairing error repairs the enzyme-treated duplex and the excised product, which can be detected by electrophoresis. See, for example, U.S. Patent No. 5,459,039. In one of the other specific embodiments, the GAVE8 gene mutation can be confirmed by a change in electrophoretic mobility. For example, single-strand conformal polymorphism (SSCP) can be used to detect differences in electrophoretic mobility between mutant and wild-type nucleic acids (Orita et al., this paper scale applies Chinese National Standard (CNS) A4 specification (210X 297 mm) (Please read the precautions on the back and fill out this page) • Installed. Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed -77- Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed 1250209 A7 B7 V. Invention Description (^ Proc Natl Acad Sci USA (1 989) 86:2766; see also Cotton, Mutat Res (1 993) 285: 1 25-1 44; H ayashi, Genet Anal Tech Appl (1 992) 9:7 3-7 9) The single-stranded DNA fragment of the sample and the control GAVE 8 nucleic acid are denatured and returned to the original. Different single-stranded nucleic acid secondary structures are produced depending on the sequence, even if the single base change can be changed in electrophoretic mobility. Detection can be performed by labeling DNA fragments or by using labeled probes. RNA (rather than DNA) can be used to enhance assay sensitivity because its sequence is more sensitive to changes in secondary structure. In a preferred embodiment Mainly to make Heteroduplex analysis separates double-stranded duplex molecules by electrophoretic mobility changes (Keen et al., Trends Genet (1 991 ) 7: 5) ° In another embodiment, an internal denaturing agent can be used. Gradient Polypropylene • Melamine Gel for Denaturing Gradient Colloidal Electrophoresis (DGGE) for the Determination of Mutations in Mutant or Wild Type Fragments (Myers et al., Nature (1 985) 31 3:495). When performing D GG E method analysis First, modify D ΝΑ to ensure incomplete denaturation, such as PCR to add a GC clamp of approximately 40 bases of GC-rich high melting point DNA. In a further embodiment, a temperature gradient can be used instead of the denaturation gradient to confirm the control group. And differences in DNA mobility of sample samples (Rosenbaum et al., Biophys Chem (1 987) 265:1 2753). Other examples of detection point mutation techniques include, but are not limited to, selection of oligonucleotide hybridization, Selected amplification or selection of primer extensions. For example, oligonucleotide primers can be prepared in which known mutations are placed centrally and then hybridized to the target DNA under hybridization conditions that allow ideal pairing (Saiki et al_, Nature (1 986) ) 324:1 63) ; S Aiki et al., Proc Natl Acad Sci (Please read the note on the back and fill out this page) This paper size applies to the Chinese National Standard (CNS) A4 specification (210X 297 mm) -78- 1250209 A7 B7 Ministry of Economics Intellectual Property Bureau employee consumption cooperatives printed five, invention instructions (g USA (1 989) 86: 6230). When the oligonucleotide is attached to the hybridization membrane and hybridized to the labeled target DNA, the dual gene-specific oligonucleotide can hybridize to the PCR amplified target DNA or a plurality of different mutations. In addition, a dual gene-specific amplification technique for selective P C R amplification can be used in conjunction with the present invention. Oligonucleotide primers that are specifically amplified can carry important mutations at the center of the molecule or at the 3' distal end of the primer (and amplification depends on the difference in hybridization) (Gibbs et al., Nucleic Acids Res (1989) 1 7:243 7-244 8) Under appropriate conditions, pairing errors can prevent or reduce polymerase extension (Prossner, Tibtech (1 993) 1 1 : 238). In addition, novel restriction points can be satisfactorily introduced in the mutated region for base excision detection (Gasparini et al., Mol Cell Probes (1992) 6:1). In some embodiments, Amplification was performed using Taq ligase (Barany, Proc Natl Acad Sci USA (1 991 ) 88: 189). In this case, only when there is a known mutation at a specific site, the 3' end of the 5' sequence will be ideally paired, and the linkage will occur, and the presence or absence of amplification will be detected. Performing the methods described herein, for example, using a diagnostic kit packaged with at least one nucleic acid probe or antibody reagent prior to conveniently utilizing clinical setting data for a patient having a GAVE8 gene symptom or a history of the disease or disease group for rash . In addition, the predictive assays described herein can be performed using any cell type or tissue that expresses GAVE8. 3. Pharmacogenetics (please read the precautions on the back and fill out this page) -Installation, -port f This paper scale applies to Chinese National Standard (CMS) A4 specification (210X 297 mm) -79- 1250209 A7 ____B7 V. Description of the invention ((Please read the notes on the back and then fill out this page) The screening assays described here confirm that the GAVE8 activity (such as GAVE8 gene expression) has a 朿fj or inhibitory effect [J, or Modulation ij can be administered to a patient to treat (preventively or therapeutically) a condition associated with GAVE8 activity (including, for example, but not limited to, an immune response associated with multiple sclerosis). Taking into account the individual's pharmacogenetics (ie, the relationship between the genotype of the patient's patient and the response of the patient to the foreign compound or drug). The difference in the metabolism of the therapeutic agent can cause a pharmacologically active drug relationship between the dose and the blood concentration. Changes can lead to severe toxicity or therapeutic success. Therefore, the patient's pharmacogenetics selects effective agents (eg drugs) based on the patient's genotype for prophylactic Or therapeutic treatment or testing. Further pharmacogenetics can be used to determine the appropriate dose and course of treatment. Accordingly, the activity of the patient's GAVE8 protein, the expression of the GAVE8 nucleic acid or the mutation of the GAVE8 gene can be determined to select appropriate Therapeutic or prophylactic treatment of the patient. Because pharmacogenetics can change the patient's effects on drug elimination and abnormalities, it is clinically a genetic variable with significant drug response. See for example: Under, Clin Chem (1 997) 43(2): 254-2 66. For the printing of the Consumers' Cooperatives of the Intellectual Property Office of the Ministry of Economic Affairs, the patterns of the two pharmacogenetic conditions can be distinguished. The gene transfer status of a single factor can be Changing the way a drug works on the body is called “the drug effect of change.” The gene delivery status of a single factor can change the way a drug works in the body, called “change drug metabolism.” The state of pharmacogenetics Can be a rare defect or polymorphism. For example, 6-phosphate glucose dehydrogenase deficiency (GOD or stupid bean disease) is general inheritance Enzyme disease, the main clinical manifestation of which is the intake of oxidant drugs (anti-malarial drugs, sulfonic acid paper scale applicable to China National Standard (CNS) A4 specifications (210X 297 metric tons) -80-1250209 kl B7 Ministry of Economic Affairs The Intellectual Property Bureau employee consumption cooperative printed five, invention instructions (drugs, painkillers, nitrofurans) and hemolysis after consumption of broad beans. In the specific embodiment, the activity of the drug metabolizing enzyme determines the strength and duration of drug action. The main factor during the period. The genetic polymorphism of drug metabolizing enzymes (such as N-acetyltransferase 2 (ΝΑΤ2) and cytochrome P450 enzymes, C.YP2D6 and CYP2C19) may explain why some patients have no expected drug effects or It shows severe drug toxicity and severe toxicity after taking standard and safe doses of the drug. Polymorphism is the two phenotypes expressed in the ethnic group, which are a wide range of metabolizers (ΕΕ) and poor metabolizers (ΡΜ). The prevalence of sputum is not the same among different ethnic groups. For example, the gene encoding CYP2D6 is a highly polymorphic gene, and many mutations have been identified in sputum, all of which can result in a lack of functional C 丫 Ρ 2 D 6 . When taking standard doses, poor metabolizers of CYP2D6 and CYP2C1 9 often experience an extended drug response and side effects. If the metabolite is the active therapeutic component (for example, the analgesic effect of codeine base is regulated by the metabolite (morphine) formed by CYP2D6), then sputum will show an untreated response. Other extreme examples are the so-called ultra-fast metabolizers, which do not respond to standard doses. Recently, it has been confirmed that ultra-rapid metabolism is molecularly amplified by the CYP2D6 gene. Therefore, the activity of the GAVE8 protein, the expression of the GAX/E8 nucleic acid, or the mutation amount of the patient's GAVE8 gene can be determined to select a suitable agent for therapeutic or prophylactic treatment of the patient. In addition, pharmacogenetic research can be used to classify genes that encode polymorphic dual genes for drug metabolizing enzymes to identify phenotypes of patient drug responses. Apply this knowledge to a drug or drug selection (for example, using a typical screening assay described here (please read the back note first and then fill out this page) if
'P 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -81 - 1250209 ΑΊ _____ _Β7__ 五、發明説明(d 調節劑),可避開不良反應或治療的失敗,如此當用GAVE8 調節劑治療病人時可增進治療或預防性的效率。 4.於臨床的試驗期間監測效應 監測藥劑(例如藥物、化合物)影響GAVE8表現或活性( 例如調控異常的細胞增殖及/或分化之能力)不僅可應用於 基本的藥物篩檢,且亦可應用於臨床的試驗。例如,在以 此描述之篩選測定,測定其功效可增加GAVE8基因之表現 '蛋白質之含量或蛋白質活性之藥劑,可用展現減低 GAVE8基因表現、蛋白質之含量或蛋白質活性之病患進行 其臨床的試驗監測。此外,篩選測定之藥劑其功效可降低 GAVE8基因表現、蛋白質之含量或蛋白質活性之藥劑,可 用展現增加GAVE8基因表現、蛋白質之含量或蛋白質活性 之病患進行其床的試驗監測。在GAVE8之表現或活性的臨 床試驗中,較佳者可用涉及例如細胞的增殖病症之其它基 因可作爲特定細胞免疫反應的標識。 例如(但非限於)用調控GAVE8活性(例如在此描述之篩 選測定確認之活性)之藥劑(例如:化合物、藥物或小分子) 進行治療可確認彼在細胞中調控之基因(包括G A\/ E 8 )。因 此,爲了硏究藥劑對細胞增殖病症的效應(例如臨床的實驗) ,可分離細胞及製備RNA以及分析涉及此病症之GAVE 8 表現及其它基因之含量。基因表現之含量(即基因表現模式) 可用北方墨點法分析或RT-PCR定量,或用在此描述之方 法測量蛋白質之含量,或測量GAVE8活性或其它基因之含 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) (請先閱讀背面之注意事項再填寫本頁) -裝- 訂 經濟部智慧財產局員工消費合作社印製 -82- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明( 量。用此方法,可用基因表現模式作爲標識’表示藥劑對 此細胞的生理反應。據此,可在病人用藥劑治療之前及治 療之各時間點測定病人之反應狀態。 較佳的具體實施例中,本發明提供方法監測藥齊U (例如 :促效劑、捨抗劑、擬肽、蛋白質、肽、核酸、小分子或 其它在此描述之篩選測定確認之候選藥物)對患者之治療功 效,其係包含以下之步驟:(i)在投藥之前從患者中得到前 投藥樣品;(N)偵測前投藥樣品中GAVE8蛋白質、傳訊 RNA或基因體DNA之表現水準;(iii)從患者中得到一個或 多個後投藥樣品;(iv)偵測後投藥樣品中GAVE8蛋白質、 傳訊RNA或基因體DNA表現或活性之水準;(v)比較前投 藥樣品與後投藥樣品中GAVE8蛋白質、傳訊RNA或基因 體DNA表現或活性之水準;以及(vi)據此改變對患者之投 藥藥劑。例如增加投藥藥劑,可增加GAVE8表現或活性至 較高的之含量,即代表增加藥劑之功效。此外,減低投藥 藥劑可降低GAVE 8之表現或活性至較低的之含量,即代表 降低藥劑之功效。 C.治療方法 本發明提供預防性的以及治療性的治療方法,治療具 有與異常的GAVE8表現或活性相關的病症或有該病症風險 (或易感該病症)之患者。該病症包括(但非限於):與多發性 硬化症相關的免疫反應。 本紙張尺度適用中國國家標準(CNS ) Α4規格(210X297公釐) (請先閱讀背面之注意事項再填寫本頁) 棒 裝- 訂 -83- 1250209 A7 _____B7 五、發明説明( (請先閱讀背面之注意事項再填寫本頁) 1 .預防性的方法 特色之一中,本發明提供患者預防與異常的GAVE8表 現或活性相關的疾病或症狀之方法,其係對患者投用調控 GAVE8表現或至少一個具有GAVE8活性之藥齊IJ。病患之 異常的G A V Ε 8表現或活性引起的疾病的風險可經在此描述 之(例如)任何或組合之診斷或預測測定加以確認。投用預防 性的藥劑可在異常的GAVE8症狀特徵表現形式發生之前, 以預防疾病或病症,或者延遲其進展。可取決於GAVE8異 常之型態,例如用GAVE8促效劑或GAVE8拮抗劑治療患 者。亦可基於在此描述之篩選測定,測定適當的藥劑。 2.治療的方法 經濟部智慧財產局員工消費合作社印製 本發明另一特色係關於調控GAVE8表現或活性之治療 的目的方法。本發明之調控方法:包含接觸細胞與調控細 胞中GAVE8蛋白質活性相關的一種或多種活性之藥劑。調 控GAVE8蛋白質活性之藥劑可作爲在此描述之藥劑,例如 核酸或蛋白質、GAV E 8蛋白質天然發生的同源的配體、肽 、GAV E 8擬肽的或其它小分子。藥劑可爲促效劑、逆向促 效劑或拮抗劑。在具體實施例之一中,藥劑可刺激一種或 多種G AV E 8蛋白質之生物活性。該刺激劑之實施例包括: 活性的GAVE8蛋白質以及已引入細胞中之編碼GAVE8的 核酸分子。另一具體實施例中,藥劑可抑制一種或多種生 物GAVE8蛋白質的活性。該抑制藥劑之實施例,包括:反 股GAVE8核酸分子及抗-GAVE8抗體。調控方法可在活體 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -84- 1250209 經濟部智慧財產局員工消費合作社印製 ΑΊ Β7五、發明説明( 外進行(例如用藥劑培養細胞)或在活體內進行(例如對患者 投用藥劑)。因此本發明提供治療遭受其特徵在於GAVE8 蛋白質或核酸分子表現或活性異常之疾病或病症折磨的病 人之方法。在具體實施例之一中本方法包含投用調控(例如 向上調控或向下調控)GAVE8表現或活性之藥劑(例如在此 描述之篩選測定確認之藥齊彳)或組合藥劑。另一具體實施例 中,本方法包含投用GAVE8蛋白質或核酸分子進行治療以 校正GAVE8表現或活性的降低或異常現象。 在GAVE8異常的向下調控及/或增加GAVE8活性具有 有利效應的情況下,可刺激 GAVE8活性。相反地,在 GAVE8異常的向上調控及/或減低GAVE8活性具有有利效 應的情況下,可抑制GAVE8活性。 本發明進一步的用下列實施例加以說明(而非限制)。所 有引用之參考文獻、專利以及發表的專利申請案,全文在 此并入參考文獻。 實施例 1 -選殖 hGAVE8 部分的人類GAVE8編碼區(AC02651 0)已用FASTA算 則確認自人類基因組資料庫。其係使用人類GAX/E8編碼 區專一的引子:5’GCGGTGCGCGCTACCAG 3’(序列確認號 碼·· 7)以及 51 GCGCCTGCCAGCAGATCC 3,(序歹[J 確認號碼 :8)進行PCR,篩選自人類大腦之互補DNA庫分離菌落。 具有初級重組型菌落之人類互補DNA庫可細分成 90個池 (pool)。將內含約3 X 1〇4菌落之各池(P〇〇l)荷載至96孔 本紙張尺度適用中國國家標準(CNS ) A4規格(2】0'乂297公釐) (請先閱讀背面之注意事項再填寫本頁) -85- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(d 之PCR平板進行PCR放大。PCR之進行係使用:94°C, 3分鐘;40週期之 94°C 30秒、52°C 30秒以及68°C 45 秒。96 ?L PCR平板中各孔之PCR產物係用2%瓊脂糠凝 膠電泳檢查。找出顯示預期1 85鹼基對之PCR斷片的可能 之 GAVE8菌落次池(subpool)。接著將正性的次池再稀釋 成90池(pool)作進一步的PCR篩選。將第二回的正性次 池之有限菌落種植入瓊脂平板,用PCR証實正性質體並進 行DNA定序分析。 實施例 2-產生過度表現hGAVE8之HEK293細胞 爲了大量提供hGAVE8進行進一步的實驗,將編碼 hGAVE8之互補DNA選殖入表現載體並轉染進HE K2 93細 胞。 產生過度表現hGAVE8之HEK293,係將內含於1 0% 胎牛血淸(Gibco/BRL目錄編號 1 600-044)之2毫升F12 HAM 培養液(Gibco/BRL,目錄編號 1 1 765-054)中之 Η E K293細胞種植入六孔的35毫米之組織培養板(每孔3 X 1 05 個 ΗΕΚ293 細胞,ATCC 目錄編號 CRL-1 573,Costar 錄編號 3 5 1 6)。 然後將細胞於37 t之C02恒溫箱中培養直到細胞達 到50-80%長滿的程度。將選殖的HGAVE8互補DNA核酸 序列使用上述的程序插入pc DN A3.1選殖載體(Invitrogen ,目錄編號 V7 90-20)。將二微克之DNA用不含血淸的 F1 2 HAM培養液稀釋至1〇◦微升。分別地將25微升之脂 (請先閲讀背面之注意事項再填寫本頁) 裝. 訂 本紙張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) -86- 1250209 Μ 經濟部智慧財產局員工消費合作社印紫 ___________Β7五、發明説明( 轉染胺(Lipofectamine)試劑(Life Technologies,目錄編號 1 8324-020)用不含血淸的F12 HAM培養液稀釋至100微 升。然後將D N A溶液與脂轉染胺(l i ρ 〇 f e c t a m i n e )溶液輕柔 的混合,在室溫下反應45分鐘,形成DNA-脂質複合物。 細胞用2毫升不含血淸的F 1 2 H A Μ培養液沖洗一次 。進行各轉染作用(在六個測試孔之測試盤進行六個轉染)時 ,係將0.8毫升不含血淸的F1 2 HAM培養液添加入內含 DNA-脂質複合物之溶液中(總體積〇.2毫升)並輕柔的加以 混合。然後將產生的混合物(以下稱各"轉染混合物")(0.8毫 升 + 0.2毫升)複蓋在沖洗的細胞上。示添加入抗-細菌的 試劑。然後將細胞在C〇2恒溫箱中3 7 °C下與脂質-D N A 複合物反應1 6小時進行轉染作用。 於反應完成之後,不去除轉染作用混合物,在細胞上 複蓋1毫升內含1 〇 %胎牛血淸之F 1 2 H A Μ培養液。於轉 染之後18小時,吸出複蓋在細胞上之培養液。然後將細 胞用 PBS pH 2-4 淸洗(Gibco/BRL 目錄編號 10010-023)並 用內含” 5 %血淸之F 1 2 H A Μ培養液取代p b s。於轉染之 後 7 2 小時,細胞用內含抗菌性藥劑基那特辛 (genetecin)(400 微克 / 毫升,L if e T e ch η ο I og i es,目錄編 號1 1 8 1 1 )之選擇的培養液稀釋十倍。 實施例 3 -促效劑測定 爲了篩選人類GAVE8促效劑,係將hGAVE8人爲地偶 合至G a q i 5信號組件。活化G q機制,刺激細胞內c a2 +自 本紙張尺度適用中國國家標準(CMS ) A4規格(2}0X 297公釐)~^ ~ -87 - (請先閲讀背面之注意事項再填寫本頁) i·. 裝·'P This paper scale applies to Chinese National Standard (CNS) A4 specification (210X 297 mm) -81 - 1250209 ΑΊ _____ _Β7__ V. Invention description (d regulator), can avoid adverse reactions or treatment failure, so use GAVE8 modulators increase the efficiency of treatment or prophylaxis when treating patients. 4. Monitoring effector monitoring agents (eg, drugs, compounds) that affect GAVE8 performance or activity (eg, ability to modulate abnormal cell proliferation and/or differentiation) during clinical trials can be applied not only to basic drug screening, but also to applications In clinical trials. For example, in the screening assay described herein, an agent that measures the efficacy of the GAVE8 gene to increase the protein content or protein activity can be used for clinical trials in patients exhibiting reduced GAVE8 gene expression, protein content, or protein activity. monitor. In addition, the agent whose screening assay is effective in reducing the GAVE8 gene expression, protein content or protein activity can be monitored by a patient exhibiting an increase in GAVE8 gene expression, protein content or protein activity. In clinical trials of the performance or activity of GAVE8, it is preferred that other genes involved in proliferative disorders such as cells be used as markers for a particular cellular immune response. For example, but not limited to, treatment with an agent (eg, a compound, drug, or small molecule) that modulates GAVE8 activity (eg, the activity identified by the screening assays described herein) can identify genes that are regulated in the cell (including GA\/). E 8 ). Thus, in order to investigate the effects of agents on cell proliferative disorders (e.g., clinical trials), cells can be isolated and RNA can be prepared and analyzed for GAVE 8 expression and other gene content involved in the condition. The content of gene expression (ie, gene expression pattern) can be quantified by Northern blotting or RT-PCR, or measured by the method described here, or measured by GAVE8 activity or other genes. (CNS) A4 size (210X 297 mm) (Please read the note on the back and fill out this page) - Install - Order Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed -82- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employees The consumer cooperative prints five, the invention description (quantity. With this method, the gene expression pattern can be used as the identifier 'to indicate the physiological response of the drug to the cell. According to this, the patient can be measured before and during the treatment of the patient. Reaction state. In a preferred embodiment, the invention provides methods for monitoring drug U (eg, agonists, inhibitors, peptidomimetics, proteins, peptides, nucleic acids, small molecules, or other screening assays described herein) The drug efficacy of the drug candidate for the patient comprises the following steps: (i) obtaining a pre-dosing sample from the patient prior to administration; (N) The performance level of GAVE8 protein, signaling RNA or genomic DNA in the pre-tested sample; (iii) one or more post-administration samples from the patient; (iv) the GAVE8 protein, the signaling RNA or the genomic body in the administered sample after detection The level of DNA performance or activity; (v) comparing the level of performance or activity of GAVE8 protein, signaling RNA or genomic DNA in pre- and post-administered samples; and (vi) changing the administration of the drug to the patient accordingly. The agent can increase the performance or activity of GAVE8 to a higher content, which means increase the efficacy of the agent. In addition, reducing the dosage of the drug can reduce the performance or activity of GAVE 8 to a lower content, which means lowering the efficacy of the agent. Methods of Treatment The present invention provides prophylactic as well as therapeutic methods of treating a patient having or at risk of (or susceptible to) a disorder associated with abnormal GAVE8 expression or activity, including but not limited to ): Immune response associated with multiple sclerosis. This paper size applies to the Chinese National Standard (CNS) Α4 specification (210X297 mm) (please Read the notes on the back and fill out this page. Sticky-book-83- 1250209 A7 _____B7 V. Invention instructions ((Please read the notes on the back and fill out this page) 1. One of the preventive methods features, this The invention provides a method for preventing a disease or symptom associated with abnormal GAVE8 expression or activity in a patient, which is administered to a patient to modulate GAVE8 expression or at least one drug having GAVE8 activity. The abnormal GAV Ε 8 expression or activity of the patient The risk of the resulting disease can be confirmed by any or a combination of diagnostic or predictive assays described herein. The administration of a prophylactic agent can prevent or delay the progression of a disease or condition prior to the onset of a characteristic GAVE8 symptom. The patient may be treated with a GAVE8 agonist or a GAVE8 antagonist depending on the type of GAVE8 abnormality. Appropriate agents can also be determined based on the screening assays described herein. 2. Methods of Treatment Printed by the Ministry of Economic Affairs, Intellectual Property Bureau, Staff Consumer Cooperatives Another feature of the present invention relates to a method of controlling the treatment of GAVE8 expression or activity. The method of regulation of the present invention comprises: an agent that contacts one or more activities associated with the activity of a GAVE8 protein in a cell. An agent that modulates the activity of a GAVE8 protein can be used as an agent described herein, such as a nucleic acid or protein, a naturally occurring ligand of a GAV E8 protein, a peptide, a GAV E8 peptidomimetic or other small molecule. The agent can be an agonist, a retro agonist or an antagonist. In one embodiment, the agent stimulates the biological activity of one or more G AV E 8 proteins. Examples of such stimulating agents include: an active GAVE8 protein and a nucleic acid molecule encoding GAVE8 that has been introduced into a cell. In another embodiment, the agent inhibits the activity of one or more of the biological GAVE8 proteins. Examples of the inhibitory agent include: a counter-GAVE8 nucleic acid molecule and an anti-GAVE8 antibody. The control method can be applied to the Chinese National Standard (CNS) A4 specification (210X 297 mm) at the scale of the living paper. -84-1250209 Printed by the Intellectual Property Office of the Intellectual Property Office of the Ministry of Economic Affairs ΑΊ 五 五 Β 发明 发明 发明 发明 发明 发明 发明 发明 发明 发明 发明 发明 发明 发明The cells are cultured or administered in vivo (e.g., administration of a medicament to a patient). The invention therefore provides a method of treating a patient suffering from a disease or condition characterized by abnormalities in the performance or activity of a GAVE8 protein or nucleic acid molecule. In one embodiment, the method comprises administering an agent that modulates (eg, up-regulates or down-regulates) GAVE8 expression or activity (eg, a drug identified in the screening assays described herein) or a combination agent. In another embodiment, the method Included with the administration of a GAVE8 protein or nucleic acid molecule for treatment to correct for a decrease or abnormality in GAVE8 expression or activity. GAVE8 activity can be stimulated in the case of a downregulation of GAVE8 abnormality and/or an increase in GAVE8 activity with a beneficial effect. Conversely, In the case of an upward regulation of GAVE8 abnormality and/or a beneficial effect of reducing GAVE8 activity, The GAVE8 activity can be inhibited. The invention is further illustrated by the following examples, without limitation. All of the cited references, patents, and issued patent applications are hereby incorporated by reference in its entirety. A portion of the human GAVE8 coding region (AC02651 0) has been identified from the human genome database using the FASTA algorithm, which uses the human GAX/E8 coding region-specific primer: 5'GCGGTGCGCGCTACCAG 3' (sequence confirmation number·· 7) and 51 GCGCCTGCCAGCAGATCC 3, (Sequence 歹 [J Confirmation Number: 8) PCR, screening for colonies from the complementary DNA library of the human brain. The human complementary DNA library with primary recombinant colonies can be subdivided into 90 pools. Approximately 3 X 1〇4 colonies of each pool (P〇〇l) load to 96-well paper scale applicable to China National Standard (CNS) A4 specifications (2] 0'乂297 mm) (Please read the notes on the back first) Fill in this page) -85- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Employees Consumption Cooperative Printed 5, Invention Description (d PCR plate for PCR amplification. PCR is used: 94 ° C, 3 minutes; 40 weeks The cycle was 94 ° C for 30 seconds, 52 ° C for 30 seconds, and 68 ° C for 45 seconds. The PCR products of each well in the 96 μL PCR plate were examined by 2% agarose gel electrophoresis. A possible GAVE8 colony subpool for the PCR fragment. The positive secondary pool was then diluted to a pool of 90 for further PCR screening. The second colony of the positive secondary pool was planted into agar plates, and the positive plastids were confirmed by PCR and subjected to DNA sequencing analysis. Example 2 - Production of HEK293 cells overexpressing hGAVE8 For further experiments in which hGAVE8 was provided in large amounts, complementary DNA encoding hGAVE8 was cloned into expression vectors and transfected into HE K2 93 cells. HEK293 producing over-expression of hGAVE8 is a 2 ml F12 HAM medium (Gibco/BRL, catalog number 1 1 765-054) containing 10% fetal calf blood (Gibco/BRL catalog number 1 600-044) E. sinensis E K293 cells were seeded into six-well 35 mm tissue culture plates (3 X 1 05 ΗΕΚ293 cells per well, ATCC catalog number CRL-1 573, Costar record number 3 5 16). The cells were then cultured in a 37 t C02 incubator until the cells reached 50-80% overfill. The selected HGAVE8 complementary DNA nucleic acid sequence was inserted into the pc DN A3.1 selection vector (Invitrogen, catalog number V7 90-20) using the procedure described above. Two micrograms of DNA was diluted to 1 microliter with a blood-free F1 2 HAM medium. Separately add 25 μl of fat (please read the note on the back and fill out this page). The paper size is applicable to the Chinese National Standard (CNS) A4 specification (210X297 mm) -86- 1250209 智慧 Ministry of Economics Intellectual Property Bureau staff consumption cooperatives India purple ___________Β7, invention instructions (Lipofectamine reagent (Life Technologies, catalog number 1 8324-020) diluted to 100 μl with blood-free F12 HAM medium. Then DNA The solution was gently mixed with a lipofectamine (li ρ 〇fectamine) solution and allowed to react at room temperature for 45 minutes to form a DNA-lipid complex. The cells were washed once with 2 ml of blood-free F 1 2 HA Μ medium. To each transfection (six transfections in six test wells), 0.8 ml of blood-free F1 2 HAM medium was added to the solution containing the DNA-lipid complex ( The total volume was 22 ml) and gently mixed. The resulting mixture (hereinafter referred to as "transfection mixture") (0.8 ml + 0.2 ml) was overlaid on the washed cells. fine The reagent of the bacteria is then transfected with the lipid-DNA complex in a C〇2 incubator at 37 ° C for 16 hours. After the reaction is completed, the transfection mixture is not removed and the cells are reconstituted. Cover 1 ml of F 1 2 HA Μ medium containing 1% fetal calf blood. After 18 hours of transfection, aspirate the culture medium covered with the cells. Then wash the cells with PBS pH 2-4 ( Gibco/BRL catalog number 10010-023) and replace the pbs with F 1 2 HA Μ culture medium containing 5% blood sputum. 72 hours after transfection, the cells contain the antibacterial agent genactin (genetecin) The selected culture medium (400 μg/ml, L if e T e ch η ο I og i es, catalog number 1 1 8 1 1 ) was diluted ten times. Example 3 - Agonist assay for screening human GAVE8 efficacies Agent, artificially couples hGAVE8 to the Gaqi 5 signal component. Activates the G q mechanism and stimulates intracellular c a2 + from the paper scale to apply Chinese National Standard (CMS) A4 specification (2}0X 297 mm)~^ ~ -87 - (Please read the notes on the back and fill out this page) i·.
、1T 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明( 肌漿網小泡之釋放。可使用 Ca2 +螯合染料偵測Ca2 +釋放 至細胞質。螢光測定影像板計讀器(或F L I P R®裝置, Molecular Devices)係使用虫螢光素酶報導基因系統監視任 何螢光變化的結果。促效劑活性可反映在螢光之增加。 將表現 hGAVE8之HEK293細胞預先用遺傳工程操作 表現一個通用形式的Gq蛋白質(Gaqi5)。爲了製備該細胞, 使用Ga 16-偶合的HEK293細胞以及實施例2之實驗準則 增進細胞中hGAVE8之表現。 細胞在37°C、及內含10%胎牛血淸、100 IU/毫升青 黴素(Gibco/BRL,目錄編號 1 51 40-1 48)、100微克/毫升 鏈黴素(目錄編號 1 51 40-1 48,Gibco/BRL)、400微克/毫 升 G418(Gibco/BRL,目錄編號 1 01 31 -035)以及 200 微 克/毫升梅衣靈(Invitrogen,目錄編號 8250-05)之 F1 2 HAM 培養液(Gibco/BRL,目錄編號 1 1 765-054)、5%C〇2 中維持對數生長。在測定之前24小時,將1 2,500細胞/ 孔之 HEK293 細胞用 96/384 Multidrop ^ g (La b systems ,類型832)種植入384-孔底部澄淸的測定平板,各孔之體 積爲50微升(Greiner/Marsh,目錄編號 N581 02)。細胞在 37°C 、濕化的 5%C〇2 恒溫箱中培養(Forma Scientific C〇2水套管式恒溫箱,模式3110)。 製備下列的儲備溶液:1 M Hepes儲備溶液(酸鹼度 7.5)(Gibco/BRL,目錄編號 15630-080); 250 毫莫耳濃度 波本尼西(probenicid)儲備溶液(Sigma,目錄編號 P8761) 之1 N Na〇H ;以及1毫莫耳濃度Fluo 4-AM Dye儲備溶液 (請先閲讀背面之注意事項再填寫本頁) 本紙張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) -88- 1250209 A7 B7 經濟部智慧財產局B(工消費合作社印製 五、發明説明(d (Molecular Probes,目錄編號 FI 4202)之 DMS〇(Sigma D 2 6 5 0)。用 1000 晕升 Hank’s 平衡的鹽溶液 (Fisher/Mediatech,目錄編號 MT21023),20 毫升之 1 Μ Hepes儲備溶液及10毫升之250毫莫耳濃度波本尼西 (probenicid)儲備溶液製備反應緩衝溶液。爲了製備荷載 緩衝,混合1.6毫升之1毫莫耳濃度 Fluo 4-AM Dye儲 備溶液與0.32毫升之波若尼酸(pluronic acid)(Molecular Probes,目錄編號 P6866)以及然後與400毫升之上述反 應緩衝溶液以及4毫升之胎牛血淸混合。 在測定之前一小時,在 384-測試盤之各孔中使用 96/384 Multidrop裝置加入50微升之新鮮製備的荷載緩衝 溶液。細胞在37 °C、濕化的恒溫箱中培養至最適化之染料 攝入爲止。在測定之前,細胞用90微升之反應緩衝溶液淸 洗 2次,使用384 EMBLA細胞淸洗機(Skatron ;型號 1 2386),其抽吸頭部組件至少在平板底部10毫米以上,每 孔留下45微升之緩衝溶液。 FLIPR® II (Molecular Devices)儀器之 CCD 照相機 (Princeton Instruments)之光圈設在 2.0,暴光 0.4 秒。 用照相機監視細胞板以準確的荷載染料。 將內含可能促效劑的化合物基因庫,在1 0微莫耳濃度 之生理鹽類緩衝溶液中進行測試。在添加入化合物之前1 0 秒測量螢光之改變。於添加入化合物之後,在第一分鐘時 每秒測量螢光一次,接著每六秒測量一次,總實驗的分析 時間爲三分鐘。於第十次掃描之後,添加入五微升等量樣 (請先閲讀背面之注意事項再填寫本頁) -裝· 訂1T 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention description (release of sarcoplasmic reticulum vesicles. Ca2+ chelate dye can be used to detect Ca2+ release to the cytoplasm. Fluorescence measurement imaging plate reading The device (or FLIPR® device, Molecular Devices) uses the luciferase reporter gene system to monitor the results of any fluorescence changes. The agonist activity can be reflected in the increase in fluorescence. HEK293 cells expressing hGAVE8 are pre-genetically engineered. The operation represented a universal form of Gq protein (Gaqi5). To prepare the cells, the expression of hGAVE8 in the cells was enhanced using Ga 16-coupled HEK293 cells and the experimental guidelines of Example 2. The cells were at 37 ° C and contained 10%. Fetal bovine blood stasis, 100 IU/ml penicillin (Gibco/BRL, catalog number 1 51 40-1 48), 100 μg/ml streptomycin (catalog number 1 51 40-1 48, Gibco/BRL), 400 μg/ ML G418 (Gibco/BRL, Cat. No. 1 01 31 -035) and F1 2 HAM medium (200 mg/ml Merlin (Invitrogen, Cat. No. 8250-05)) (Gibco/BRL, Cat. No. 1 1 765-054 ), 5% C〇2 Logarithmic growth was maintained. At 24 hours prior to assay, 1 2,500 cells/well of HEK293 cells were seeded into 96-384 Multidrop ^ g (La b systems, type 832) into a 384-well bottom assay plate, each well. The volume is 50 μl (Greiner/Marsh, catalog number N581 02). The cells are cultured in a humidified 5% C〇2 incubator at 37 ° C (Forma Scientific C〇2 water-tube thermostat, mode 3110) Prepare the following stock solutions: 1 M Hepes stock solution (pH 7.5) (Gibco/BRL, catalog number 15630-080); 250 millimolar concentration of probenicid stock solution (Sigma, catalog number P8761) 1 N Na〇H; and 1 millimol of Fluo 4-AM Dye stock solution (please read the back note first and then fill out this page) This paper scale applies to China National Standard (CNS) A4 specification (210X297 mm) -88- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau B (Ministry Consumer Cooperatives Printed 5, Inventions (d (Molecular Probes, Catalog No. FI 4202) DMS〇 (Sigma D 2 6 50). A reaction buffer solution was prepared using a 1000 halo Hank's balanced salt solution (Fisher/Mediatech, catalog number MT21023), 20 ml of 1 Μ Hepes stock solution and 10 ml of a 250 mM molar probenicid stock solution. To prepare the load buffer, 1.6 ml of a 1 mM molar Fluo 4-AM Dye stock solution was mixed with 0.32 ml of pluronic acid (Molecular Probes, Cat. No. P6866) and then with 400 ml of the above reaction buffer. The solution and 4 ml of fetal calf blood were mixed. One hour prior to the assay, 50 microliters of freshly prepared load buffer solution was added to each well of the 384-test disc using a 96/384 Multidrop apparatus. The cells were cultured in a humidified incubator at 37 °C until the optimum dye intake. Prior to the assay, the cells were rinsed twice with 90 μl of the reaction buffer solution using a 384 EMBLA cell wash (Skatron; Model 1 2386) with a suction head assembly at least 10 mm above the bottom of the plate, leaving each well Lower 45 microliters of buffer solution. The CCD camera of the FLIPR® II (Molecular Devices) instrument (Princeton Instruments) has an aperture of 2.0 and a exposure of 0.4 seconds. Monitor the cell plate with a camera to accurately load the dye. A library of compound genes containing possible agonists was tested in a physiological salt buffer solution at 10 micromolar. The change in fluorescence was measured 10 seconds before the addition of the compound. After the addition of the compound, the fluorescence was measured once per second at the first minute, then every six seconds, and the analysis time of the total experiment was three minutes. After the tenth scan, add five microliters of the same sample (please read the notes on the back and fill out this page) - loading and ordering
P 本紙張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) -89- 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(8) 品之1 00微莫耳濃度之原料化合物,細胞之最終化合物 ‘度爲1 0 /(放旲耳濃度。紀錄前8 0次掃描中極大値營光之 改變,計量促效劑活性並與1 〇微莫耳濃度AT P ( S i g m a A9062)誘發的極大値螢光之改變相比較。 實施例 4 -拮抗劑測定 篩選人類GAVE8拮抗劑,將hGAVE8人爲地偶合至 G q系統。如實施例3,用F L丨P R®裝置監視螢光產生的任 何改變。任何螢光之降低代表拮抗劑之活性。 如實施例 3,將表現 hGAVE8之HEK293細胞預先用 遺傳工程操作表現一個通用形式的G q蛋白質(G a q i 5)。將細 胞在37t:及5%C02之F12 HAM培養液(Gibco/BRL,目錄 編號 11765-054),內含10 %胎牛血淸、1〇〇 IU/毫升青黴 素(Gibco/BRL,目錄編號1 5140-1 48)、100微克/毫升鏈 黴素(目錄編號 15140-148, Gib co/BRL)、40◦微克/毫升 G41 8(Gibco/BRL,目錄編號 1 0 1 3 1-035)以及 200 微克/毫 升梅衣靈(Invitrogen,目錄編號 8250-05)中維持對數期生 長。在測定之前二十四小時,用 96/384 Multidrop裝置在 3 84-孔澄淸底部的測定平板中種植入1 2,500細胞/孔之 HEK293細胞,體積爲5◦微升(Greiner/ Marsh,目錄編號 N581 02)。細胞在37°C、濕化的5 % C〇2中培養。 製備下列之儲備溶液:1 M Hepes儲備溶液(酸鹼度 7.5)(Gibco/BRL,目錄編號 15630-080); 250 毫莫耳濃度 波本尼西(probenicid)儲備溶液(Sigma,目錄編號 P876 1) (請先閲讀背面之注意事項再填寫本頁) -裝. 、-贷 本纸張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -90- 1250209 ΑΊ _ Β7_ 五、發明説明(^ (請先閲讀背面之注意事項再填寫本頁) 之1 N Na〇H ; 1毫莫耳濃度Fluo 4-AM Dye儲備溶液 (Molecular Probes,目錄編號 f 1 4202)之 DMSO(Sigma D2650);以及 480 nM SPP-l(BioMol)儲備溶液。用 1 000 毫升 Hank’s平衡的鹽溶液(Fisher/Mediatech,目錄編號 ΜT210 23)、20毫升1莫耳濃度Hepes儲備溶液、10毫升 250毫莫耳濃度之probenicid儲備溶液以及1毫莫耳濃度 之C a C 1 2製備反應緩衝溶液。爲了製備荷載緩衝溶液,將 80微升1毫莫耳濃度 Fluo 4-AM Dye儲備溶液與16微 升之波若尼酸(pluronic acid)(Molecular Probes,目錄編 號P6866)混合然後與20毫升之上述的反應緩衝溶液以及 ◦.2毫升胎牛血淸相混合。 在測定之前之十分鐘,384-測試盤之各孔中用 96/384 Multidrop裝置添加入30微升之新鮮製備的荷載緩衝溶液 。細胞在37 °C、濕化的C02恒溫箱培養至最適化染料攝入 。在測定之前’細胞用1 〇〇微升之反應緩衝溶液淸洗三次 ,使用384 EMBLA細胞淸洗機,其抽吸頭部組件至少在平 板底部4 0毫米以上,每孔留下4 5微升之緩衝溶液。 經濟部智慧財產局員工消費合作社印製 使用Platemate -384吸量器(Matrix)在細胞中加入五 微升之100微莫耳濃度原料化合物。培育步驟期間化合物 之濃度大約1 0爲微莫耳濃度。然後將細胞置於FLIPR® II ,在第一分鐘時每秒測量螢光一次,接著每六秒測量一次 ,總實驗的分析時間爲三分鐘。於第十次掃描之後,添加 入鞘胺醇-1-磷酸鹽(10微莫耳濃度,Bio Mol SL 140)。各 自添加之後’ 3 8 4個管尖用2 0微升之〇 . q 1 % d M S〇的水 本纸張尺度適用中國國家標準(CNS ) Α4規格(210X 297公釐) -91 - 1250209 經濟部智慧財產局員工消費合作社印製 kl B7五、發明説明( 淸洗1 〇次。 實施例 5 -受體結合測定 爲了製備內含hGAVE 8受體之膜分層,在內含1毫莫 耳濃度 EDTA之磷酸鹽-緩衝的生理食鹽水(1〇毫升)中培育 收穫過度表現hGAVE8之HEK293細胞株。細胞進一步的 用內含1毫莫耳濃度 EDTA之磷酸鹽-緩衝的生理食鹽水 (10毫升)淸洗三次,再懸浮於5毫升之緩衝溶液A(50毫莫 耳濃度 Tris-HCI(酸鹼度7.8)(Sigma T6791 )、5毫莫耳濃 度 MgC12(Sigma M8266)、及 1 毫莫耳濃度 EGTA(Sigma 0396 卜 然後用組織均質器(Polytron,Kinemetica,Model PT 10/35)破細胞 1 分鐘。產生的均質液用 Sorvall Instruments ROB 離心機在 49,000 X g、4°C 下離心 20 分 鐘。產生的沈澱塊再懸浮於25毫升緩衝溶液 A並重覆離 心步驟三次。最終離心後,沈癜塊再一次再懸浮於 5毫升 之緩衝溶液 A,等量分裝樣品並儲存於-7 (TC。 進行受體結合測定係使用膜溶析份與作爲示蹤劑之放 射性標記之鞘胺醇-1-磷酸鹽(或SPP-1)。測定於96孔微量 滴定盤(Beckman Instruments)中進行。結合反應物由 18 微克之HEK293細胞製劑與放射性的SPP-1 (〇.〇1毫微莫耳 濃度-25毫微莫耳濃度)、最終體積〇.2毫升內含〇.彳%牛血 淸白蛋白之緩衝溶液A (Sigma,目錄編號34287)組成(參 閱 lm et al., J Biol C hem(2000)275( 1 9) : 1 4 2 8 1 -1 4 2 8 6)。 本紙張尺度適用中國國家標準(CNS ) A4规格(2lOX 297公釐) (請先閱讀背面之注意事項再填寫本頁) -92- 1250209 A7 B7 五、發明説明(90> (請先閲讀背面之注意事項再填寫本頁) 反應物在室溫下反應1小時。以0.3 %聚乙烯亞胺(Sigma, 目錄編號 P3143)及0.1%牛血淸白蛋白(BSA)前處理1小 時之 Whatman GF/C濾膜經由多甬道收集器(Brandell)過 濾終止反應。將混合物施用至濾器並反應一小時。濾膜用1 毫升冰冷之50毫莫耳濃度丁「丨5_|_1(^|(酸鹼度7.6)淸洗6次 。測量放射性,基於各示蹤劑濃度下,總結合及非專一性 結合(背景)間之不同計算專一的結合。須要8至1 6個濃度 數據點測定配體與受體之結合以達成配體及受體間之均衡 狀態(平衡結合參數)及非放射性的S P P-1競爭放射性的 SPP-1與受體結合之須要量(競爭結合値)。製作抑制曲線, 測定須要達成抑制50%結合(IC50)之濃度。 實施例 6 -北方墨點法分析 北方墨點法分析係使用源自數個人類組織之RNA樣品 進行,測定組織是否表現 hGAVE8受體基因。可使用市售 之(例如C I ο n t e c h)其中內含多種人類組織R N A之濾膜。探 針可爲 P32-標記的全長 hGAVE8互補DNA。 經濟部智慧財產局員工消費合作社印製 製備探針 製備P32-標記的hGAVE8互補DNA的方法如下。將二 十五毫微克之hGAVE8互補DNA再懸浮於45微升毫莫 耳濃度Tris-HC丨(酸鹼度7.5); 1毫莫耳濃度 Ε〇ΤΑ之微離 心管,在95 °C下加熱5分鐘。然後將該管在冰中冷卻5分 鐘。急冷之後,將管內之混合物再懸浮於45微升之 本紙張尺度適用中國國家標準(CNS ) A4規格(2】0X29*7公釐) -93- 1250209 kl B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(91) GAVE8互補DNA及說明如上之緩衝溶液,與RTS Rad Prime Mix(由 RTS Rad Prime D N A-標記系統供應)(L if e Technologies,目錄編號 1 0387-0 1 7 )混合。加入五微升之 p32-標言己白勺 ^ -dCTP(Amersham, AA0005) , J:匕活 1生: 3 0 00 Ci/毫莫耳濃度,溫和但徹底的攪拌。產生的混合物在 37°C下反應1〇分鐘。加入5微升之0.2莫耳濃度EDTA(酸 鹼度8.0)停止反應。從混合物中取出5微升之等量樣品並 計數放射性,評估hGAVE8互補DNA中倂之放射性的α -dCTP 〇 R N A萃取 在培養盤中加入 1 毫升 Trizol 試劑(Life Technologies,目錄編號 1 55 9 6 )直接的溶解細胞或組織。 然後將細胞溶解液用移液管抽吸數次使溶解液均勻的分散( 接著將細胞溶解液轉移至試管)。均化作用之後將溶解液在 3 0 °C下反應5分鐘完全分開核蛋白複合物。反應後在溶解 液中加入0.2毫升氯仿(Sigma,目錄編號 C 53 12)/ 1毫升 Trizol試劑,激烈地搖動試管1 5秒。然後溶解液在30°C 下反應3分鐘。反應後溶解液在1 2,0 0 0 X g、4 °C下離心 1 5分鐘。將產生的水相轉移至新試管並加入〇. 5毫升異丙 醇/1毫升Trizol試劑。然後水相樣品在30 °C下反應10 分鐘,在4 °C、1 2,000 X g下離心1 〇分鐘。離心後移除上 淸液’殘留之RNA沈澱塊用70%乙醇沖洗。然後沖洗的 樣品在4 C、7 5 0 0 X g下離心1 〇分鐘,丟棄產生的上淸 本紙張尺度適用f國國家標準(CNS ) A4規ϋϊ〇Χ 297公釐) ' ------ -94- (請先閲讀背面之注意事項再填寫本頁) 1250209 A7 B7 經濟部智慧財產局員工消費合作社印製 五、發明説明(92> 液。然後乾燥殘留之RNA沈澱塊,再懸浮於不含核糖核酸 痃的水中(Life Technologies,目錄編號 10977-015)。 膠體電泳 製備瓊脂糖凝膠係將2克之瓊脂糖(Sigma,目錄編號 A0 169)熔化於水、5X甲醛凝膠操作緩衝溶液(參閱以下之 描述)及2.2 Μ 曱醛(Sigma,目錄編號 P82031)。 進行膠體電泳之樣品製備如下: RNA 4.5微升(總共5微克) 5X甲醛操作緩衝溶液 2.0微升 甲醛 3.5微升 甲醯胺(Sigma,目錄編號 F9037) 1 0.0微升 (5X甲醛凝膠操作緩衝溶液是0.1 Μ 3-(N-嗎福啉基) 丙烷磺酸(MOPS)(酸鹼度7.0)(Sigma,目錄編號 M5162) ;40毫莫耳濃度乙酸鈉(Sigma,目錄編號 57670);以及 5毫莫耳濃度 EDTA(酸驗度8.0)(Sigma,目錄編號 E7889))。 樣品在65°C下反應15分鐘,然後在冰中急速冷凍。 於急速冷凍之後,將樣品離心5秒。然後在樣品中加入二 微升之醛凝膠荷載緩衝溶液;50%甘油(Sigma,目錄編號 〇5516);1毫莫耳濃度£〇丁六(酸鹼度8.0);0.25%溴酚藍 (Sigma,目錄編號 18046);0.25%二甲苯氰基卩「(3丨9〇13 (請先閱讀背面之注意事項再填寫本頁) 本紙張尺度適用中國國家標準(CNS ) A4規格(210 X 297公釐) - 95- 1250209 A7 B7 五、發明説明(93) ,目錄編號 335940)。 (請先閲讀背面之注意事項再填寫本頁} 此外,內含各種器官RNA樣品之雜交濾膜可購自市面 (CI〇 ntech )。 凝膠在5 V/公分下預操作5分鐘。預操作後將樣品裝 入凝膠。然後凝膠在4 V/公分、浸沒入甲醛凝膠操作緩衝 溶液下操作。在操作2小時時更新緩衝溶液。 將R N A從凝膠轉移至硝化纖維素 將凝膠用溴化乙錠(Sigma,目錄編號 El 385)(0.5微 克/毫升之〇·1莫耳濃度乙酸銨(Sigma,目錄編號 09689)) 染色30分鐘,確定RNA並未降解。然後將RNA使用描述 於 Sambrook e t a I., ed s. ( Molecular Cloning: A Laboratory Manual, volume 1 , pp.7.46-7.51 , Cold Spring Harbor Laboratory Press (1 989))之實驗準貝ij從壤月旨糖凝膠 轉移至硝化纖維素濾膜(Schleicher & Schuell Inc,目錄編 號 74330-026)° 與P32-標記的互補DNA雜交 經濟部智慧財產局員工消費合作社印製 將 Clontech ExpressHyb 雜交溶液(Clontech,目錄編 號 8015-1)在68°C下反應2小時。反應後,將15毫升加 熱之雜交溶液倒至多重組織樣品之北方(MTN)膜。將MTN 膜在68 °C下搖動浸泡於雜交溶液。於1小時之後,添加入 在95°C下煮沸 5分鐘變性的hGAVES互補DNA探針,濃 度爲1〇6計數/毫升。在68 °C下將反應之雜交溶液覆蓋凝 膠然後繼續搖動2小時至過夜。 本纸張尺度適用中國國家標準(CNS ) A4規格(210X297公釐) -96- 1250209 A7 B7 五、發明説明(94) 然後從Clontech ExpressHyb雜交溶液中移除MTN膜 ,將膜浸入 1 5毫升 Clontech淸洗溶液 1 (2X SSC ; ◦ •05%SDS),在室溫下搖動40分鐘,每40分鐘更新溶 液連續淸洗3次。然後將Clontech淸洗溶液 2(0.1X SSC ;0.1 %SDS)在60 °C下加熱1小時。然後將膜浸入15毫升 Clontech 淸洗溶液 2(0.1X SSC; 0.1%SDS)在 6CTC 下搖 動60分鐘淸連續洗 3次。每15分鐘更新淸洗溶液。 顯影 將膜暴露至 Kodak X-GMAT AR(Kodak,目錄編號 1 65 1 579)底片加上強化板在-70°下過夜。 結果 hGAVE8高量的表現於人類脾臟、腦及PBL。獨特的 轉錄產物大小約2.4仟鹼基。 實施例 7 - P C R測定P This paper scale applies to China National Standard (CNS) A4 specification (210X297 mm) -89- 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention description (8) 1 00 micromolar concentration The starting compound, the final compound of the cell's degree is 1 0 / (the concentration of the sputum ear. Record the change of the luminescence in the first 80 scans, measure the activity of the agonist and the concentration of 1 〇 micromolar AT P (S Igma A9062) Comparison of changes induced by maximal 値 fluorescence. Example 4 - Antagonist assay Screening of human GAVE8 antagonists, artificially coupling hGAVE8 to the G q system. As in Example 3, monitoring with FL丨PR® device Any change in fluorescence produced. Any decrease in fluorescence represents the activity of the antagonist. As in Example 3, HEK293 cells expressing hGAVE8 were previously genetically engineered to express a universal form of Gq protein (G aqi 5). F12 HAM medium (Gibco/BRL, catalog number 11765-054) at 37t: and 5% CO2 containing 10% fetal calf blood, 1〇〇IU/ml penicillin (Gibco/BRL, catalog number 1 5140- 1 48), 100 μg/ml chain (Cat. No. 15140-148, Gib co/BRL), 40 μg/ml G41 8 (Gibco/BRL, catalog number 1 0 1 3 1-035) and 200 μg/ml Meeking (Invitrogen, catalog number 8250) Maintain log phase growth in -05). Twenty-four hours before the assay, HEK293 cells at 12,500 cells/well were seeded into the assay plate at the bottom of the 3 84-well Clarion using a 96/384 Multidrop device in a volume of 5 μm. l (Greiner/Marsh, catalog number N581 02). Cells were cultured in humidified 5% C〇2 at 37 ° C. Prepare the following stock solutions: 1 M Hepes stock solution (pH 7.5) (Gibco/BRL, catalogue No. 15630-080); 250 millimolar concentration of probenicid stock solution (Sigma, catalog number P876 1) (please read the notes on the back and fill out this page) - loading., - loan paper The scale applies to the Chinese National Standard (CNS) A4 specification (210X 297 mm) -90- 1250209 ΑΊ _ Β7_ V. Invention description (^ (Please read the note on the back and fill out this page) 1 N Na〇H ; 1 Millocent concentration Fluo 4-AM Dye stock solution (Molecular Probes, catalog number f 1 4202) DMSO (Sigma D2650); and 480 nM SPP-1 (BioMol) stock solution. Use 1 000 ml of Hank's balanced salt solution (Fisher/Mediatech, catalog number 210T210 23), 20 ml of 1 molar concentration of Hepes stock solution, 10 ml of 250 mM molar probenicid stock solution and 1 mmol of C a concentration A reaction buffer solution was prepared by C 1 2 . To prepare a load buffer solution, 80 μl of a 1 mM concentration of Fluo 4-AM Dye stock solution was mixed with 16 μl of pluronic acid (Molecular Probes, Cat. No. P6866) and then 20 ml of the above The reaction buffer solution was mixed with 2. 2 ml fetal calf blood. Ten microliters of freshly prepared load buffer solution was added to each well of the 384-test disc using a 96/384 Multidrop apparatus ten minutes prior to the assay. The cells were incubated at 37 ° C in a humidified C02 incubator to optimize the dye intake. Before the assay, the cells were washed three times with 1 〇〇 microliter of reaction buffer solution using a 384 EMBLA cell washer with a suction head assembly at least 40 mm above the bottom of the plate, leaving 4 5 μl per well. Buffer solution. Printed by the Intellectual Property Office of the Ministry of Economic Affairs, the Consumers' Cooperative, using a Platemate-384 absorbing device (Matrix) to add five microliters of a 100 micromolar concentration of the starting compound to the cells. The concentration of the compound during the incubation step is approximately 10 micromolar. The cells were then placed in FLIPR® II, and the fluorescence was measured once per second for the first minute, followed by every six seconds, and the total analysis time was three minutes. After the tenth scan, sphingosine-1-phosphate (10 micromolar concentration, Bio Mol SL 140) was added. After each addition, '3 8 4 pipe tips are used with 20 microliters. q 1 % d MS〇 water-based paper scale applies to China National Standard (CNS) Α4 specification (210X 297 mm) -91 - 1250209 Economy Ministry of Intellectual Property Bureau employee consumption cooperative printed kl B7 five, invention instructions (washing 1 times. Example 5 - receptor binding assay in order to prepare membrane layer containing hGAVE 8 receptor, containing 1 millimole The HEK293 cell line overexpressing hGAVE8 was harvested in phosphate-buffered physiological saline (1 ml) of EDTA. The cells were further phosphate-buffered saline containing 10 mM EDT. Dilute three times and resuspend in 5 ml of buffer solution A (50 millimolar Tris-HCI (pH 7.8) (Sigma T6791), 5 millimolar concentration MgC12 (Sigma M8266), and 1 millimolar concentration EGTA (Sigma 0396) was then disrupted by tissue homogenizer (Polytron, Kinemetica, Model PT 10/35) for 1 minute. The resulting homogenate was centrifuged at 49,000 X g, 4 ° C for 20 minutes using a Sorvall Instruments ROB centrifuge. The pellet is resuspended in 25 ml The solution A was flushed and the centrifugation step was repeated three times. After the final centrifugation, the sedimentation block was again resuspended in 5 ml of buffer solution A, and the sample was dispensed in equal amounts and stored at -7 (TC. The receptor binding assay was performed using a membrane solution. Fractions and radiolabeled sphingosine-1-phosphate (or SPP-1) as a tracer. The assay was performed in a 96-well microtiter plate (Beckman Instruments). The binding reaction consisted of 18 micrograms of HEK293 cell preparation. With radioactive SPP-1 (〇.〇1 nanomolar concentration -25 nanomolar concentration), final volume 〇.2 ml containing 〇.彳% bovine blood albumin buffer solution A (Sigma, catalogue No. 34287) Composition (see lm et al., J Biol C hem (2000) 275 (1 9) : 1 4 2 8 1 -1 4 2 8 6). This paper scale applies to the Chinese National Standard (CNS) A4 specification ( 2lOX 297 mm) (Please read the notes on the back and fill out this page) -92- 1250209 A7 B7 V. Inventions (90> (Please read the notes on the back and fill out this page) Reagents at room temperature Reaction for 1 hour. With 0.3% polyethyleneimine (Sigma, catalog number P3143) and 0.1% bovine blood albumin BSA) Whatman GF treated for 1 hour prior to the time / C filter via a multi-collector corridor (a Brandell) filtering the reaction was terminated. The mixture was applied to a filter and reacted for one hour. The filter was washed 6 times with 1 ml of ice-cold 50 mM concentration of 丨5_|_1(^|(pH 7.6). The radioactivity was measured, based on the total concentration of each tracer, combined with non-specific binding (background) The difference between the calculations is specific. It requires 8 to 16 concentration data points to determine the binding of the ligand to the receptor to achieve equilibrium between the ligand and the receptor (balance binding parameters) and non-radioactive SP P-1 The amount of competitive radioactive SPP-1 bound to the receptor (competitive binding 値). The inhibition curve was prepared and the concentration required to inhibit 50% binding (IC50) was determined. Example 6 - Northern blot analysis Northern blot analysis It is performed using RNA samples derived from several human tissues to determine whether the tissue expresses the hGAVE8 receptor gene. Commercially available (eg CI n ntech) filters containing various human tissue RNA can be used. The probe can be P32- Labeled full-length hGAVE8 complementary DNA. Method of preparation of P32-labeled hGAVE8 complementary DNA by the Ministry of Economic Affairs Intellectual Property Office Staff Consumer Cooperative Printed probes. Resuspend twenty-five ng of hGAVE8 complementary DNA in 45 μl. Moer concentration Tris-HC丨 (pH 7.5); Microfluidic tube at 1 mM concentration, heated at 95 ° C for 5 minutes. The tube was then cooled in ice for 5 minutes. After quenching, the tube was chilled. The mixture is resuspended in 45 microliters of paper. The Chinese National Standard (CNS) A4 specification (2) 0X29*7 mm) -93- 1250209 kl B7 Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative printing 5, invention Description (91) GAVE8 complementary DNA and buffer solution as described above, mixed with RTS Rad Prime Mix (supplied by RTS Rad Prime DN A-labeling system) (L if e Technologies, catalog number 1 0387-0 1 7 ). Microliters of p32-marker has been ^^dCTP (Amersham, AA0005), J: 匕活一生: 3 0 00 Ci / millimolar concentration, mild but thorough agitation. The resulting mixture is at 37 ° C The reaction was stopped for 1 minute. The reaction was stopped by adding 5 μl of 0.2 molar concentration EDTA (pH 8.0). Five microliters of the same sample was taken from the mixture and the radioactivity was counted to evaluate the radioactive α-dCTP of 倂 in the hGAVE8 complementary DNA. RNA extraction Add 1 ml of Trizol reagent to the plate ( Life Technologies, Cat. No. 1 55 9 6 ) Directly dissolve cells or tissues. Then pipette the cell lysate several times to spread the solution evenly (then transfer the cell lysate to the tube). After homogenization, the solution was completely reacted at 30 ° C for 5 minutes to completely separate the nucleoprotein complex. After the reaction, 0.2 ml of chloroform (Sigma, Cat. No. C 53 12) / 1 ml of Trizol reagent was added to the solution, and the tube was vigorously shaken for 15 seconds. The solution was then reacted at 30 ° C for 3 minutes. After the reaction, the solution was centrifuged at 1 2,0 0 X g, 4 ° C for 15 minutes. The resulting aqueous phase was transferred to a new tube and 〇. 5 ml of isopropanol / 1 ml of Trizol reagent was added. The aqueous phase sample was then reacted at 30 ° C for 10 minutes and centrifuged at 1 2,000 X g for 1 minute at 4 °C. The supernatant was removed after centrifugation. The residual RNA pellet was rinsed with 70% ethanol. The rinsed sample is then centrifuged at 4 C, 7 5 0 X g for 1 〇 minutes, and the resulting upper 淸 paper size is applicable to national standards (CNS) A4 ϋϊ〇Χ 297 mm) ---- -- -94- (Please read the notes on the back and fill out this page) 1250209 A7 B7 Ministry of Economic Affairs Intellectual Property Bureau Staff Consumer Cooperative Printed V. Inventions (92> Solution. Then dry the residual RNA pellets and resuspend In ribonucleic acid-free water (Life Technologies, catalog number 10977-015). Colloidal electrophoresis preparation of agarose gel system 2 g of agarose (Sigma, catalog number A0 169) was melted in water, 5X formaldehyde gel operation buffer Solution (see description below) and 2.2 Μ Furfural (Sigma, Cat. No. P82031). Samples for colloidal electrophoresis were prepared as follows: RNA 4.5 μl (total 5 μg) 5X formaldehyde manipulation buffer solution 2.0 μl formaldehyde 3.5 μL Indoleamine (Sigma, Cat. No. F9037) 1 0.0 μl (5X Formaldehyde Gel Solution Buffer Solution is 0.1 Μ 3-(N-morpholinyl) Propane Sulfonate (MOPS) (pH 7.0) (Sigma, Cat. No. M5162 ); 40 millimolar concentration B Sodium (Sigma, Cat. No. 57670); and 5 millimolar EDTA (Acidity 8.0) (Sigma, Cat. No. E7889). The sample was reacted at 65 ° C for 15 minutes and then snap frozen in ice. After freezing, the sample was centrifuged for 5 seconds. Then two microliters of aldehyde gel load buffer solution was added to the sample; 50% glycerol (Sigma, catalog number 〇 5516); 1 millimolar concentration 〇 六 ( (pH 8.0) ;0.25% bromophenol blue (Sigma, catalog number 18046); 0.25% xylyl cyanohydrazide "(3丨9〇13 (please read the back note first and then fill out this page) This paper scale applies to Chinese national standards (CNS A4 size (210 X 297 mm) - 95- 1250209 A7 B7 V. Invention description (93), catalog number 335940). (Please read the note on the back and fill out this page.) In addition, it contains various organ RNA samples. The hybridization filter can be purchased from the market (CI〇ntech). The gel is pre-treated for 5 minutes at 5 V/cm. The sample is loaded into the gel after pre-operation. The gel is then immersed in formaldehyde at 4 V/cm. The gel operation buffer solution was operated. The buffer solution was updated at 2 hours of operation. Transfer of A from the gel to nitrocellulose. The gel was stained with ethidium bromide (Sigma, Cat. No. 385) (0.5 μg/ml 1·1 molar concentration of ammonium acetate (Sigma, Cat. No. 09689)) for 30 minutes. To confirm that the RNA has not degraded. The RNA was then used in the experiment described in Sambrook eta I., ed s. (Molecular Cloning: A Laboratory Manual, volume 1 , pp. 7.46-7.51, Cold Spring Harbor Laboratory Press (1 989)). The glycogel is transferred to a nitrocellulose filter (Schleicher & Schuell Inc, Cat. No. 74330-026)° with the P32-labeled complementary DNA hybridization Ministry of Commerce, Intellectual Property Office, Staff Consumer Cooperative, Printing Clontech ExpressHyb Hybrid Solution (Clontech, Catalog No. 8015-1) was reacted at 68 ° C for 2 hours. After the reaction, 15 ml of the heated hybridization solution was poured onto a north (MTN) membrane of a multi-tissue sample. The MTN membrane was immersed in the hybridization solution at 68 ° C with shaking. After 1 hour, the hGAVES complementary DNA probe denatured at 95 ° C for 5 minutes was added to a concentration of 1 〇 6 counts/ml. The reacted hybridization solution was covered with gel at 68 ° C and then shaken for 2 hours to overnight. This paper size applies to the Chinese National Standard (CNS) A4 specification (210X297 mm) -96- 1250209 A7 B7 V. Inventive Note (94) Then remove the MTN film from the Clontech ExpressHyb hybridization solution and immerse the membrane in 15 ml Clontech Wash solution 1 (2X SSC; ◦ • 05% SDS), shake at room temperature for 40 minutes, and refresh the solution for 3 times every 40 minutes. Clontech rinse solution 2 (0.1X SSC; 0.1% SDS) was then heated at 60 °C for 1 hour. The membrane was then immersed in 15 ml of Clontech Wash Solution 2 (0.1X SSC; 0.1% SDS) for 6 minutes at 6 CTC and continuously washed 3 times. The rinse solution was updated every 15 minutes. Development The film was exposed to a Kodak X-GMAT AR (Kodak, Cat. No. 1 65 1 579) film plus a reinforced plate at -70° overnight. Results The high amount of hGAVE8 was expressed in human spleen, brain and PBL. The unique transcript size is approximately 2.4 仟 base. Example 7 - P C R determination
TaqMan®或即時 RT-p C R爲偵測樣品中傳訊RNA強 而有力的工具。本技藝係使用 AmpMTaqGold®DNA聚合酶 之5’核酸酶活性在pcR期間分解 TaqMan®探針。 TaqMan®探針在5’端含有報導染料(在本實驗中爲:6-FAM(6-羧基螢光素)),在3·端含有悴熄劑染料(本實驗中爲 :TAMRA(6-羧基-Ν,Ν,Ν’,Ν1·四甲基若丹明))。TaqMan® 探 針係特別地設計來與正向及逆轉引子位點之間重要的目梗 本纸張尺度適用中國國家標準(CNS ) A4規格(2】〇χ 297公釐) (請先閲讀背面之注意事項再填寫本頁} •裝 、可 經濟部智慧財產局員工消費合作社印製 -97 - 1250209 A7 B7 五、發明説明(95> 互補DNA雜交。當探針係爲完整時,端之悴熄劑染料可 抑制5·-端報導染料之螢光。於PCR期間,AmpliTaq G ο丨d ® D N A聚合酶之5'至3 ’活性可切開探針之$,_端報導 染料及3’端悴熄劑染料,造成報導染料之置換。一旦置換 後,報導染料之螢光不再受悴熄劑染料之抑製。因此,監 測報導染料之螢光增加可偵測到產自目標的互補DNA模版 之P C R產物堆積。 使用 Perkin Elmer Applied Biosystems 之 ABI Prism 序列偵測器系統(型號AB1 7700)監視PCR期間報導螢光之 增加。報導信號用被動的參考發射値進行常態化。 製備互補DNA模版 總 RNA以及數個組織之聚腺苷酸+ RNA係購自 Clontech(參閱表1及2之目錄編號)。 (請先閲讀背面之注意事項再填寫本頁) 裝·TaqMan® or RT-p C R is a powerful tool for detecting interfering RNA in samples. This technique uses the 5' nuclease activity of AmpMTaqGold® DNA polymerase to decompose the TaqMan® probe during pcR. The TaqMan® probe contains a reporter dye (in this experiment: 6-FAM (6-carboxyfluorescein)) at the 5' end and a quencher dye at the 3' end (in this experiment: TAMRA (6- Carboxyl-Ν, Ν, Ν', Ν1·tetramethylrhodamine)). The TaqMan® probe system is specifically designed to work with positive and reverse primer sites. The paper size applies to the Chinese National Standard (CNS) A4 specification (2) 297 297 mm) (please read the back first) Note: Please fill out this page again} • Installed, can be edited by the Ministry of Economic Affairs, Intellectual Property Bureau, Staff Consumer Cooperatives - 97 - 1250209 A7 B7 V. Invention Description (95) Complementary DNA hybridization. When the probe system is complete, the end of the probe The let-off dye inhibits the fluorescence of the dye at the 5'-end. During PCR, the 5' to 3' activity of AmpliTaq G ο丨d ® DNA polymerase can cleave the $, _ end reporter dye and 3' end of the probe. A quencher dye that causes the replacement of the reporter dye. Once replaced, the fluorescent dye reported is no longer inhibited by the quencher dye. Therefore, monitoring the fluorescent increase of the reported dye can detect the complementary DNA template produced from the target. The PCR product was stacked. The ABI Prism Sequence Detector System (Model AB1 7700) from Perkin Elmer Applied Biosystems was used to monitor the increase in reported fluorescence during PCR. The reporter signal was normalized with a passive reference emission enthalpy. The template total RNA and several tissues of polyadenylation + RNA were purchased from Clontech (see Tables 1 and 2 for catalog numbers). (Please read the notes on the back and fill out this page)
經濟部智慧財產局員工消費合作社印製 本紙張尺度適用中國國家標準(CMS ) A4規格(2j〇X 297公釐) -98- 1250209 A7Printed by the Intellectual Property Office of the Ministry of Economic Affairs, the Consumer Cooperatives. This paper scale applies to the Chinese National Standard (CMS) A4 specification (2j〇X 297 mm) -98- 1250209 A7
7 B 五、發明説明(96) 經濟部智慧財產局員工消費合作社印製 表1 人類總RNA C I ο n t e c h之目錄編號 人類腦部,全部 64020-1 人類心臟 64025-1 人類腎臟 64030-1 人類肝臟 64022-1 人類肺臟. 64023-1 人類胰臟 64031-1 人類骨骼肌 64033-1 人類小腸 64039-1 人類脾臟 64034-1 人類胃部 64090-1 人類胸腺 64028-1 (請先閲讀背面之注意事項再填寫本頁) 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -99- 1250209 A7 ____B7 五、發明説明(97) 表2 RNA樣品 Clontech之目錄編號 人類腦部 全部 6516-1 人類腦部, 扁桃腺 6574-1 人類腦部, 尾狀核 6575-1 人類腦部, |小腦 6543-1 人類腦部, •胼胝體 6577-1 人類腦部: …海馬回 6578-1 人類腦部: ,黑質 6580-1 人類腦部, ,丘腦 6582-1 人類胎兒腦部 6525-1 (請先閲讀背面之注意事項再填寫本頁) 經濟部智慧財產局員工消費合作社印製 將五微克之總RNA與2微升之(50毫微克/升)隨機六 體引子(L i f e T e c h η ο丨〇 g i e s,目錄編號1 8 0 9 0)混合,總反 應體積爲7微升。產生的混合物在7 0 °C下加熱1 0分鐘並 迅速地在冰中冷卻。然後在混合物中加入:4微升之5X第 一股緩衝溶液、2微升之0 · 1毫莫耳濃度 DTT、1微升之 1 〇毫莫耳濃度dNTP以及1微升之水。將混合物溫和的混 合,在 37 °C下反應 2分鐘。反應後加入5微升之 Superscript RT-PCR 反轉錄酵素(Life Technologies,目 錄編號1 8090)。然後混合物在37 °C下反應60分鐘。加入 1微升之2.5毫莫耳濃度 EDTA停止反應。然後混合物在 本纸張尺度適用中國國家標準(CNS ) A4規格(2】0X297公釐) " -100- 1250209 A7 B7 五、發明説明(y 6 5 °C下反應1 〇分鐘。 (請先閲讀背面之注意事項再填寫本頁) PCR及 TaqMan® 測定係在 96孔微量滴定盤 Mic「〇Amp 光學管(Perkin Elmer,目錄編號 N801 -0933)中 進行。各孔之反應混合物中包含25微升之TaqMan® PC R 混合物(Perkin Elmer,目錄編號 N 8 08-02 30)、1微升之正 向弓1子(5,-丁0 6八0 6(:丁丁0(:丁(:0八(:丁0丁-3,)(序歹[1確認號碼: 9)、1 微升之逆轉弓丨子(5,-TTGCCGCTCTACGCCAAGGCC-1)(序列確認號碼:10)、1微升之TaqMan® 探針(5·- AGCACGCAGAAGAGCACG 第三-3,)(序歹 U 確認號碼·· 11)、 1微升之互補D N A、及2微升之水。各組織樣品在互補 DNA 模版濃度:5、2、1、0.5、0.25、0.125、0.0625 毫 微克/微升下製作雙重複之TaqMan®樣品(模版互補DNA 濃度爲最終濃度)。然後用 MicroAmp光學的8-剝除帽 (Perkin Elmer,目錄編號 N801-0935)密封平板。 經濟部智慧財產局員工消費合作社印製 使用人類β ·肌動蛋白基因(P e r k i η E I m e r,目錄編號 401 846)雙重複的製作標準曲線。從標準曲線之各互補DNA 模版濃度中得到放大分子的數目。從放大已知的基因得到 之標準曲線,對未知的目標基因放大的互補D N A分子進行 定量並用內部控制加以規度化。 上述 Ta q M a η®反應之結果用相對於組織的任選之調 節倍數表示(例如心臟G A V Ε 8表現値/腦G A V Ε 8表現値)。 在中樞神經系統中,選擇小腦作爲GAVE8表現之參考値, 並推演出相對的倍數進行比較。 雖然本發明已用以上實施例加以詳細描述,據瞭解可 本纸張尺度適用中.國國家摞準(CNS ) A4規格(210X29*7公釐) • 101 - 1250209 A7 B7 五、發明説明( 據此作出各種修飾而不脫出本發明之精髓。據此,本發明 僅受限於以下之申請專利範圍。 所有引用之專利以及文獻全文在此倂入參考文獻。 (請先閲讀背面之注意事項再填寫本頁) 經濟部智^財產局員工消費合作社印製 本紙張尺度適用中國國家標準(CNS ) A4規格(210X 297公釐) -102 -7 B V. Description of Invention (96) Ministry of Economic Affairs Intellectual Property Bureau Staff Consumption Cooperative Printed Table 1 Human Total RNA CI ο ntech Catalog Number Human Brain, All 64420-1 Human Heart 64025-1 Human Kidney 64030-1 Human Liver 64022-1 Human lung. 64023-1 Human pancreas 64031-1 Human skeletal muscle 64033-1 Human small intestine 64039-1 Human spleen 64034-1 Human stomach 64090-1 Human thymus 64029-1 (Please read the back note first) Fill in this page again) This paper size applies to Chinese National Standard (CNS) A4 specification (210X 297 mm) -99- 1250209 A7 ____B7 V. Invention description (97) Table 2 RNA sample Clontech catalogue number Human brain all 6516- 1 Human brain, tonsil 6574-1 human brain, caudate nucleus 6575-1 human brain, | cerebellum 6543-1 human brain, • corpus callosum 6577-1 human brain: ... hippocampus back 6576-1 human brain Department:, black matter 6580-1 human brain, thalamus 6582-1 human fetal brain 6525-1 (please read the back note first and then fill out this page) Ministry of Economic Affairs Intellectual Property Bureau employee consumption cooperative Five micrograms of total RNA was mixed with 2 microliters (50 ng/L) of random six-body primers (L ife T ech η ο丨〇gies, catalog number 1 8 0 90) with a total reaction volume of 7 μm. Rise. The resulting mixture was heated at 70 ° C for 10 minutes and rapidly cooled in ice. Then, 4 μl of 5X first buffer solution, 2 μl of 0·1 mmol concentration DTT, 1 μl of 1 mM milliliter concentration dNTP, and 1 μl of water were added to the mixture. The mixture was gently mixed and reacted at 37 ° C for 2 minutes. Five microliters of Superscript RT-PCR reverse transcriptase (Life Technologies, catalog number 1 8090) was added after the reaction. The mixture was then reacted at 37 ° C for 60 minutes. The reaction was stopped by adding 1 μl of 2.5 mM concentration of EDTA. Then the mixture is applied to the Chinese National Standard (CNS) A4 specification (2) 0X297 mm on the paper scale. " -100- 1250209 A7 B7 5. Invention description (y 6 5 °C reaction 1 〇 min. (Please first Read the notes on the back and fill out this page. The PCR and TaqMan® assays were performed in a 96-well microtiter plate Mic “〇Amp optical tube (Perkin Elmer, Cat. No. N801 -0933). The reaction mixture for each well contained 25 μm. Ascending TaqMan® PC R mixture (Perkin Elmer, catalog number N 8 08-02 30), 1 microliter of positive bow 1 (5,-Ding 0 6 8 6 6 (: Ding Ding 0 (: D (: 0) Eight (: Ding 0 Ding-3,) (Preface 1 [1 Confirmation Number: 9), 1 μl of reversal bow scorpion (5,-TTGCCGCTCTACGCCAAGGCC-1) (sequence confirmation number: 10), 1 μl of TaqMan ® probe (5·- AGCACGCAGAAGAGCACG third-3,) (preface 确认U confirmation number··11), 1 μl of complementary DNA, and 2 μl of water. Concentration of complementary tissue template for each tissue sample: 5. Double replicate TaqMan® samples were prepared at 2, 1, 0.5, 0.25, 0.125, 0.0625 ng/μl (the template complementary DNA concentration was the final concentration). The plate was sealed with a MicroAmp optical 8-stripping cap (Perkin Elmer, catalog number N801-0935). The Ministry of Economic Affairs Intellectual Property Office employee consumption cooperative printed the human β-actin gene (P erki η EI mer, catalog number 401 846) Double-repeat production standard curve. The number of amplified molecules is obtained from the complementary DNA template concentration of the standard curve. The standard curve obtained by amplifying the known gene is used to quantify the complementary DNA molecule amplified by the unknown target gene. Internal control is regulated. The results of the above Ta q M a η® reaction are expressed in terms of an optional adjustment factor relative to the tissue (eg, cardiac GAV Ε 8 performance 値 / brain GAV Ε 8 performance 値). In the central nervous system The cerebellum is selected as the reference G of the GAVE8 performance, and the relative multiples are compared for comparison. Although the present invention has been described in detail using the above embodiments, it is understood that the paper size can be applied to the national standard (CNS) A4 specification. (210X29*7 mm) • 101 - 1250209 A7 B7 V. Description of the Invention (There are various modifications made therefrom without departing from the essence of the invention. Accordingly, the invention is to be limited only by the scope of the following claims. (Please read the note on the back and then fill out this page.) Ministry of Economic Affairs ^ Property Bureau Staff Consumer Cooperative Print This paper scale applies to China National Standard (CNS) A4 specification (210X 297 mm) -102 -
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- 2002-07-19 IL IL15993902A patent/IL159939A0/en unknown
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- 2002-07-19 JP JP2003514877A patent/JP2005522184A/en not_active Abandoned
- 2002-07-19 CA CA002454427A patent/CA2454427A1/en not_active Abandoned
- 2002-07-19 TW TW091116166A patent/TWI250209B/en not_active IP Right Cessation
- 2002-07-19 WO PCT/US2002/023208 patent/WO2003008560A2/en not_active Application Discontinuation
-
2004
- 2004-01-19 NO NO20040252A patent/NO20040252L/en not_active Application Discontinuation
Also Published As
Publication number | Publication date |
---|---|
NO20040252L (en) | 2004-03-19 |
CA2454427A1 (en) | 2003-01-30 |
WO2003008560A2 (en) | 2003-01-30 |
MXPA04000437A (en) | 2004-03-18 |
JP2005522184A (en) | 2005-07-28 |
IL159939A0 (en) | 2004-06-20 |
EP1448583A4 (en) | 2006-02-08 |
WO2003008560A8 (en) | 2004-06-24 |
EP1448583A2 (en) | 2004-08-25 |
BR0211338A (en) | 2004-11-16 |
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