OA18627A - Syk inhibitors. - Google Patents
Syk inhibitors. Download PDFInfo
- Publication number
- OA18627A OA18627A OA1201600238 OA18627A OA 18627 A OA18627 A OA 18627A OA 1201600238 OA1201600238 OA 1201600238 OA 18627 A OA18627 A OA 18627A
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- OA
- OAPI
- Prior art keywords
- pharmaceutically acceptable
- compound
- crystal
- sait
- cancer
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Abstract
The present disclosure relates to compounds that are Syk inhibitors and to their use in the treatment of various disease states, including cancer and inflammatory conditions. In particular embodiments, the structure of the compounds is given by Formula I:
Description
SYK INHIBITORS
FDELD
The présent disclosure relates to compounds and to their use in the treatment of various diseases, including cancer and inflammatory conditions. The disclosure also relates to methods for préparation of the compounds and to pharmaceutical compositions comprising such compounds.
BACKGROUND
Protein kinases, the largest family of human enzymes, encompass well over 500 proteins. Spleen Tyrosine Kinase (Syk) is a member of the Syk family of tyrosine kinases, and is a regulator of early B-cell development as well as mature B-cell activation, signaling, and survival.
The inhibition of Syk activity can be useful for the treatment of allergie disorders, autoimmune diseases and inflammatory diseases such as: SLE, rheumatoid arthritis, multiple vasculitides, idiopathic thrombocytopénie purpura (ΓΓΡ), myasthenia gravis, allergie rhinitis, chronic obstructive pulmonary disease (COPD), adult respiratory distress syndrome (ARDs) and asthma. In addition, Syk has been reported to play an important rôle in ligand-independent tonie signaling through the B-cell receptor, known to be an important survival signal in B-cells. Thus, inhibition of Syk activity may also be useful in treating certain types of cancer, including B-cell lymphoma and leukemia. U.S. Patent Numbers 8,455,493 and 8,440,667 disclose Syk inhibitors, the disclosures of which are hereby incorporated by référencé in their entirety.
There is a continued need to provide compounds that are effective Syk inhibitors, including compounds having désirable pharmacokinetic properties for use as therapeutics for treating cancers and other diseases.
SUMMARY
Accordingly, the présent disclosure provides compounds that function as Syk inhibitors. In one embodiment, the disclosure provides a compound of Formula I:
or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stéréo isomer, mixture of stereoisomers or tautomer thereof, wherein:
R1 is selected from the group consisting of * , * , * , and
OH
* , wherein * indicates the carbon atom of the indicated phenyl ring of Formula I to which R1 is attached;
R2 is H or 2-hydroxyethoxyl;
R3 is H or methyl; and
R4 is H or methyl.
Within each of the embodiments described herein comprising a compound of Formula I, there is a further embodiment wherein each of R2, R3, and R4 is H. Within each of the embodiments described herein comprising a compound of Formula I, there is a another embodiment wherein R2is H, R3 is methyl, and R4 is H. Within each of the embodiments described herein comprising a compound of Formula I, there is also another embodiment wherein R2 is H, R3 is H, and R4 is methyl.
Within each of the embodiments described herein comprising a compound of Formula I, there is still another embodiment wherein R2 is 2-hydroxyethoxyl, R3 is methyl, and R4 is H. Within each of the embodiments described herein comprising a compound of Formula I, there is still another embodiment wherein R2 is 2-hydroxyethoxyl, R3 is methyl, and R4 is H. Within each of the embodiments described herein comprising a compound of Formula I, there is still further embodiment wherein R2 is 2-hydroxyethoxyl, R3 is H, and R4 is methyl.
Provided herein are also methods of using the compound of Formula I, or a pharmaceutically acceptable sait or co-ciystal thereof, in the treatment of a disease or condition in a subject, such as ahuman. Provided herein are also methods of using the compound of Formula Π, shown below, or a pharmaceutically acceptable sait or co-crystal thereof, in the treatment of a disease or condition in a subject, such as a human. Also provided is a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, for use in therapy. Also provided is a compound of Formula Π, or a pharmaceutically acceptable sait or co-crystal thereof, for use in therapy. Also provided is a compound of Formula L, or a pharmaceutically acceptable sait or co-crystal thereof, for use in the treatment of a disease or condition in a subject, such as a human. Also provided is a compound of Formula Π, or a pharmaceutically acceptable sait or co-crystal thereof, for use in the treatment of a disease or condition in a subject, such as a human. Also provided are uses of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, in the manufacture of a médicament for the treatment of disease or condition in a subject, such as a human. Also provided are uses of the compound of Formula Π, or a pharmaceutically acceptable sait or co-crystal thereof in the manufacture of a médicament for the treatment of disease or condition in a subject, such as a human. Such diseases and conditions include inflammatory disorders, allergie disorders, autoimmune diseases, or a cancer (including carcinoma, sarcoma, melanoma, lymphoma and leukemia).
In some instances, the diseases and conditions that may be treated with the compounds disclosed herein include cancers such as bladder cancer, breast cancer, colorectal cancer, endométrial cancer, kidney/renal-cell cancer, lung cancer, pancreatic cancer, prostate cancer, thyroid cancer, leukemia, melanoma, and non-Hodgkin’s lymphoma.
In some embodiments, the disease is cancer, including a hématologie malignancy or a solid tumor. In some embodiments, the cancer is lymphoma, multiple myeloma, or leukemia. In some embodiments, the hématologie malignancy is leukemia or lymphoma.
In some embodiments, the disclosure provides pharmaceutical compositions comprising a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, and a pharmaceutically acceptable vehicle. In other embodiments, the disclosure provides pharmaceutical compositions comprising a compound of Formula Π, or a pharmaceutically acceptable sait or co-crystal thereof, and a pharmaceutically acceptable vehicle.
In some embodiments, the disclosure provides pharmaceutical compositions comprising a therapeutically effective amount of a compound of Formula I, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, and at least one pharmaceutically acceptable vehicle. In other embodiments, the disclosure provides pharmaceutical compositions comprising a therapeutically effective amount of a compound of Formula Π, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, and at least one pharmaceutically acceptable vehicle. Examples of pharmaceutically acceptable vehicle may be selected from carriers and other excipients, adjuvants and the like.
Also provided are methods of treating a disease or condition in a subject in need thereof by administering to the subject a therapeutically effective amount of a compound of Formula I, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, or a pharmaceutical composition thereof. In one variation of a method of treating a disease or condition in a subject in need thereof (e.g., a human in need thereof), the method comprises administering to the subject a therapeutically effective amount of a compound of Formula L, or a pharmaceutically acceptable sait or co-crystal thereof. In some embodiments, the disease or condition is an inflammatory disorder, an allergie disorder, an autoimmune disease, or a cancer.
Also provided is a method of inhibiting kinase activity of a Syk kinase polypeptide by contacting the polypeptide with a compound of Formula I or a pharmaceutically acceptable sait, pharmaceutically acceptable co-ciystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof. Also provided is a method of inhibiting kinase activity of a Syk kinase polypeptide by contacting the polypeptide with a compound of Formula Π or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof. In one aspect is provided a method of inhibiting kinase activity of a Syk kinase polypeptide by contacting the polypeptide with a compound of Formula I or a pharmaceutically acceptable sait or co-crystal thereof. In one aspect, these methods of inhibiting kinase activity are performed in vitro. In another aspect is provided a method of inhibiting kinase activity of a Syk kinase polypeptide by contacting the polypeptide with a compound of Formula Π or a pharmaceutically acceptable sait or cocrystal thereof. In one aspect, these methods of inhibiting kinase activity are performed in vitro.
Also provided is a kit that includes a compound of Formula I, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof. Also provided is a kit that includes a compound of Formula Π, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof. In one aspect, the kit comprises a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. In a further aspect, the kit comprises a compound of Formula Π, or a pharmaceutically acceptable sait or cocrystal thereof. The kit may comprise a label and/or instructions for use of the compound in the treatment of a disease or condition in a subject (e.g., human) in need thereof In some embodiments, the disease or condition may be associated with or mediated by Syk activity.
Also provided are articles of manufacture that include a compound of Formula I, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stéréo isomer, mixture of stereoisomers or tautomer thereof; and a container. Also provided are articles of manufacture that include a compound of Formula Π, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof; and a container.In one aspect, the article of manufacture comprises a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. In one embodiment, the container may be a vial, jar, ampoule, preloaded syringe, or an intravenous bag. In another aspect, the article of manufacture comprises a compound of Formula Π, or a pharmaceutically acceptable sait or co-crystal thereof. In one embodiment, the container may be a vial, jar, ampoule, preloaded syringe, or an intravenous bag.
In some embodiments, the invention relates to a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. In some embodiments, the invention relates to a compound of Formula Π, or a pharmaceutically acceptable sait or co-crystal thereof.
Additional aspects and embodiments of this disclosure are described throughout.
BRIEF DESCRIPTION OF THE DRAWINGS
FIG. 1 is an XRPD Analysis of Mono MSA Sait Form I of the compound of Example 2.
FIG. 2 is an NMR Analysis of Mono MSA Sait Form I of the compound of Example 2.
FIG. 3 is a DSC Analysis of Mono MSA Sait Form I of the compound of Example 2.
FIG. 4 is a TGA Analysis of Mono MSA Sait Form I of the compound of Example 2.
FIG. 5 is an XRPD Analysis Mono MSA Sait Form Π of the compound of Example 2.
FIG. 6 is an NMR Analysis Mono MSA Sait Form Π of the compound of Example 2.
FIG. 7 is a DSC Analysis of Mono MSA Sait Form Π ofthe compound of Example 2.
FIG. 8 is a TGA Analysis of Mono MSA Sait Form Π ofthe compound of Example 2.
FIG. 9 is an XRPD Analysis of Succinate Form I of the compound of Example 2.
FIG. 10 is an NMR Analysis of Succinate Form I of the compound of Example 2. FIG. 11 is a DSC Analysis of Succinate Form I of the compound of Example 2. FIG. 12 is a TGA Analysis of Succinate Form I of the compound of Example 2. FIG. 13 is an XRPD Analysis of Succinate Form Π of the compound of Example 2. FIG. 14 is an NMR Analysis of Succinate Form Π ofthe compound ofExample 2. FIG. 15 is a DSC Analysis of Succinate Form Π of the compound of Example 2. FIG. 16 is aTGA Analysis ofSuccinate Form Πofthe compound ofExample 2.
DETAILED DESCRIPTION
It has surprisingly been discovered that compounds of Formula I, or pharmaceutically acceptable salts or co-crystals thereof, possess advantageous properties, making them attractive compounds for use as described herein. The compounds, in addition to being Syk inhibitors, possess désirable solubility and pharmacokinetic properties. These findings are particularly striking in view of the properties of comparable parameters of compounds of similar base structure.
The following description sets forth exemplary methods, parameters and the like. It should be recognized, however, that such description is not intended as a limitation on the scope of the présent disclosure but is instead provided as a description of exemplary embodiments.
Also described for a compound of Formula I are the pharmaceutically acceptable salts, pharmaceutically acceptable co-crystals, pharmaceutically acceptable esters, pharmaceutically acceptable solvatés, hydrates, isomers (including optical isomers, racemates, or other mixtures thereof), tautomers, isotopes, polymorphs, and pharmaceutically acceptable prodrugs of such compounds.
The compounds of the disclosure may possess an asymmetric center, and can be produced as a racemic mixture or as individual enantiomers. The individual enantiomers may be obtained by asymmetric synthesis or by resolving a racemic or non-racemic mixture of an intermediate at some appropriate stage of the synthesis. The individual enantiomers may also be obtained by resolution of the compound by conventional means, such as crystallization in the presence of a resolving agent, or chromatography, using, for example a chiral high pressure liquid chromatography (HPLC) column. The individual enantiomers as well as racemic and non-racemic mixtures of enantiomers are within the scope of the présent disclosure, ail of which are intended to be included within the structures depicted in this spécification unless otherwise specifically indicated.
Définitions
As used in the présent disclosure, the following words and phrases are generally intended to hâve the meanings as set forth below, except to the extent that the context in which they are used indicates otherwise.
“Isomers” are different compounds that hâve the same molecular formula. Isomers include stereoisomers, enantiomers and diastereomers.
“Stereoisomers” are isomers that differ only in the way the atoms are arranged in space.
“Enantiomers” are a pair of stereoisomers that are non-superimposable mirror images of each other. Ail mixture of a pair of enantiomers is a “racemic” mixture. The term (±) is used to designate a racemic mixture where appropriate.
The absolute stereochemistry is specified according to the Cahn Ingold Prelog R S System. When the compound is a pure enantiomer the stereochemistry at each chiral carbon may be specified by either R or S. Resolved compounds whose absolute configuration is unknown are designated (+) or (-) depending on the direction (dextro- or laevorotary) that they rotate the plane of polarized light at the wavelength of the sodium D line.
The term “therapeutically effective amount” or “pharmaceutically effective amount” refers to an amount that is sufficient to efifect treatment, as defined below, when administered to a subject (e.g., a mammal, such as a human) in need of such treatment. The therapeutically or pharmaceutically effective amount will vaiy depending upon the subject and disease condition being treated, the weight and âge of the subject, the severity of the disease condition, the manner of administration and die like, which can readily be determined by one of ordinary skill in the art. For example, a “therapeutically effective amount” or a “pharmaceutically effective amount” of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, is an amount sufficient to modulate Syk expression or activity, and thereby treat a subject (e.g., a human) suffering an indication, or to ameliorate or alleviate the existing symptoms of the indication. For example, a therapeutically or pharmaceutically effective amount may be an amount sufficient to decrease a symptom of a disease or condition responsive to inhibition of Syk activity.
The term “polymorph” refers to different crystal structures of a crystalline compound. The different polymorphs may resuit from différences in crystal packing (packing polymorphism) or différences in packing between different conformera of the same molécule (conformational polymorphism). It is understood that any polymorph of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, used in the treatment of a disease or condition as described herein, while possibly providing varied properties, including pharmacokinetic properties, once absorbed into the subject, results in the compound of Formula I or a compound of Formula Π, such that the use of a compound of Formula I or a compound of Formula Π encompasses the use of any polymorph of a compound of Formula I or a compound of Formula Π, respectively, or a pharmaceutically acceptable sait or co-crystal thereof
The term “solvaté” refera to a complex formed by the combining of a compound of Formula I or a compound of Formula Π and a solvent. It is understood that any solvaté of a compound of Formula I or a compound of Formula Π used in the treatment of a disease or condition as described herein, while possibly providing varied properties, including pharmacokinetic properties, once absorbed into the subject, results in the compound of
Formula I or a compound of Formula Π, such that the use of a compound of Formula I or a compound of Formula Π encompasses the use of any solvaté of a compound of Formula I or a compound of Formula Π, respectively.
The term “hydrate” refers to the complex formed by the combining of a compound of Formula I or a compound of Formula Π, or a pharmaceutically acceptable sait or co-crystal thereof,and water. It is understood that any hydrate of a compound of Formula I or a compound of Formula Π, or a pharmaceutically acceptable sait or co-crystal thereof, used in the treatment of a disease or condition as described herein, while possibly providing varied properties, including pharmacokinetic properties, once absorbed into the subject, results in the compound of Formula I or of Formula Π, such that the use of a compound of Formula I or Formula Π encompasses the use of any hydrate of a compound of Formula I or Formula Π, respectively.
The term “prodrug” refers to a compound derived from or readily converted to a compound of Formula I or of Formula Π that include Chemical groups which, in vivo, can be converted and/or can be split off from the remainder of the molécule to provide a compound of Formula I or of Formula II or active moiety of the drug, or a pharmaceutically acceptable sait or co-crystal thereof or a biologically active métabolite thereof. It is understood that any prodrug of a compound of Formula I or of Formula Π used in the treatment of a disease or condition as described herein, while possibly providing varied properties, including pharmacokinetic properties, once absorbed into the subject, results in the compound of Formula I or Formula Π, such that the use of a compound of Formula I or Formula Π encompasses the use of any prodrug of a compound of Formula I or Formula Π, respectively. Prodrugs can, for example, be produced by replacing functionalities présent in the compounds of the invention with appropriate moieties which are metabolized in vivo to form a compound of the invention. The design of prodrugs is well-known in the art, as discussed in Bundgaard, Design of Prodrugs 1985 (Elsevier), The Practice ofMedicinal Chemistry 2003,2nd Ed, 561-585 and Leinweber, Drug Metab. Res. 1987,18: 379.
Examples of prodrugs of compounds of the invention are esters and amides of the compounds of the invention. For example, where the compound of the invention contains an alcohol group (-OH), the hydrogen atom of the alcohol group may be replaced in order to form an ester (e.g. the hydrogen atom may be replaced by -C(O)Ci-6alkyl. Where the compound of the invention contains a primary or secondary amino group, one or more hydrogen atoms of the amino group may be replaced in order to form an amide (e.g. one or more hydrogen atoms may be replaced by C(O)Ci-6alkyl).
Also provided herein are isotopically labeled forms of compounds detailed herein. Isotopically labeled compounds hâve structures depicted by the formulas given herein except that one or more atoms are replaced by an atom having a selected atomic mass or mass number. Examples of isotopes that can be incoiporated into compounds of the disclosure include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorous, fluorine and chlorine, such as, but not limited to 2H (deuterium, D), 3H (tritium), nC, 13C, 14C, 15N, 18F, 31P, 32P, 35S, 36Cl and 125I. Various isotopically labeled compounds of the présent disclosure, for example those into which radioactive isotopes such as 3H, ,3C and 14C are incorporated, are provided. Such isotopically labeled compounds may be useful in metabolic studies, reaction kinetic studies, détection or imaging techniques, such as positron émission tomography (PET) or single-photon émission computed tomography (SPECT) including drug or substrate tissue distribution assays or in radioactive treatment of subjects (e.g. humans). Also provided for isotopically labeled compounds described herein are any pharmaceutically acceptable salts, pharmaceutically acceptable esters, pharmaceutically acceptable solvatés, hydrates, enantiomers, mixture of enantiomers, tautomers, polymorphs, and pharmaceutically acceptable prodrugs thereof
The disclosure also includes the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, in which from 1 to n hydrogens attached to a carbon atom is/are replaced by deuterium, in which n is the number ofhydrogens in the molécule. Such compounds may exhibit increased résistance to metabolism and are thus useful for increasing the half life of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, when administered to a mammal. See, for example, Foster, “Deuterium Isotope Effects in Studies of Drug Metabolism”, Trends Pharmacol. Sci. 5(12):524-527 (1984). Such compounds are synthesized by means well known in the art, for example by employing starting materials in which one or more hydrogens hâve been replaced by deuterium.
Deuterium labeled or substituted therapeutic compounds of the disclosure may hâve improved DMPK (drug metabolism and pharmacokinetics) properties, relating to distribution, metabolism and excrétion (ADME). Substitution with heavier isotopes such as deuterium may afford certain therapeutic advantages resulting from greater metabolic stability, for example increased in vivo half-life, reduced dosage requirements and/or an improvement in therapeutic index. An l8F labeled compound may be usefùl for PET or SPECT studies. Isotopically labeled compounds ofthis disclosure and prodrugs thereofcan generally be prepared by carrying out the procedures disclosed in the schemes or in the examples and préparations described below by substituting a readily available isotopically labeled reagent for a non-isotopically labeled reagent. It is understood tfiat deuterium in this context is regarded as a substituent in the compound of Formula I.
The concentration of such a heavier isotope, specifically deuterium, may be defined by an isotopic enrichment factor. In the compounds of this disclosure any atom not specifically designated as a particular isotope is meant to represent any stable isotope of that atom. Unless otherwise stated, when a position is designated specifically as “H” or “hydrogen”, the position is understood to hâve hydrogen at its natural abondance isotopic composition. Accordingly, in the compounds of this disclosure any atom specifically designated as a deuterium (D) is meant to represent deuterium.
The term “inhibition” indicates a decrease, such as a significant decrease, in the baseline activity of a biological activity or process. “Inhibition of Syk activity” refers to a decrease in Syk activity as a direct or indirect response to the presence of a compound of Formula I, or a pharmaceutically acceptable sait or co-ciystal thereof, relative to the activity of Syk in the absence of such compound or a pharmaceutically acceptable sait or co-crystal thereof. The decrease in activity may be due to the direct interaction of the compound with Syk, or due to the interaction of the compound(s) described herein with one or more other factors that in tum affect Syk activity. For example, the presence of the compound(s) may decrease Syk activity by directly binding to the Syk, by causing (directly or indirectly) another factor to decrease Syk activity, or by (directly or indirectly) decreasing the amount of Syk présent in the cell or organism. In some embodiments, the inhibition of Syk activity may be compared in the same subject prior to treatment, or other subjects not receiving the treatment.
Inhibition of Syk activity also refers to observable inhibition of Syk activity in a standard biochemical assay for Syk activity, such as the ATP hydrolysis assay described in Example 12 below.
In some embodiments, the compound described herein, e.g. a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, inhibits Syk kinase activity with an ICso value less than or equal to 1 micromolar, such as 0.1 nM to 1 μΜ or 1 nM to 1 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an ICso value less than or equal to less than 500 nanomolar, such as 0.1 nM to 500 nM or 1 nM to 500 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an ICso value less than or equal to less than 200 nanomolar, such as 0.1 nM to 200 nM or 1 nM to 200 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an IC5o value less than or equal to less than 100 nanomolar, such as 0.1 nM to 100 nM or 1 nM to 100 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an ICso value less than or equal to 50 nanomolar, such as 0.1 nM to 50 nM or 1 nM to 50 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an IC50 value less than or equal to 20 nanomolar, such as 0.1 nM to 20 nM or 1 nM to 20 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an ICso value less than or equal to 10 nanomolar, such as 0.1 nM to 10 nM or 1 nM to 10 nM. In some embodiments, the IC50 value is measured as described in the assay of Example 12.
“Inhibition of B-cell activity” refers to a decrease in B-cell activity as a direct or indirect response to the presence of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, relative to the activity of B-cells in the absence of such compound or a pharmaceutically acceptable sait or co-crystal thereof. The decrease in activity may be due to the direct interaction of the compound with Syk or with one or more other factors that in tum affect B-cell activity.
Inhibition of B-cell activity also refers to observable inhibition of CD86 expression in a standard assay. In some embodiments, the compound described herein has an IC50 value less than or equal to 10 micromolar, such as I nM to 10 μΜ or 10 nM to 10 μΜ. In some embodiments, the compound has an IC50 value less than or equal to less than 1 micromolar, such as 1 nM to 1 μΜ or 10 nMto 1 μΜ. In some embodiments, the compound has an IC50 value less than or equal to 500 nanomolar, such as 1 nM to 500 nM or 10 nM to 500 nM.
“B cell activity” also includes activation, redistribution, reorganization, or capping of one or more various B cell membrane receptors, or membrane-bound immunoglobulins, e.g., IgM, IgG, and IgD. Most B cells also hâve membrane receptors for the Fc portion of IgG in the form of either antigen-antibody complexes or aggregated IgG. B cells also carry membrane receptors for the activated components of complément, e.g., C3b, C3d, C4, and Clq. These various membrane receptors and membrane-bound immunoglobulins hâve membrane mobility and can undergo redistribution and capping that can initiate signal transduction.
B cell activity also includes the synthesis or production of antibodies or immunoglobulins. Immunoglobulins are synthesized by the B cell sériés and hâve common structural features and structural units. Five immunoglobulin classes, i.e., IgG, IgA, IgM, IgD, and IgE, are recognized on the basis of structural différences of their heavy chains including the amino acid sequence and length of the polypeptide chain. Antibodies to a given antigen may be detected in ail or several classes of immunoglobulins or may be restricted to a single class or subclass of immunoglobulin. Autoantibodies or autoimmune antibodies may likewise belong to one or several classes of immunoglobulins. For example, rheumatoid factors (antibodies to IgG) are most often recognized as an IgM imnnunoglobulin, but can also consist of IgG or IgA.
In addition, B cell activity also is intended to include a sériés of events leading to B cell clonal expansion (prolifération) from precursor B lymphocytes and différentiation into antibody-synthesizing plasma cells which takes place in conjunction with antigenbinding and with cytokine signais from other cells.
“Inhibition of B-cell prolifération” refers to inhibition of prolifération of abnormal B-cells, such as cancerous B-cells, e.g. lymphoma B-cells and/ or inhibition of normal, non-diseased B-cells. The term “inhibition of B-cell prolifération” indicates any significant decrease in the number of B-cells, either in vitro or in vivo. Thus an inhibition of B-cell prolifération in vitro would be any significant decrease in the number of B-cells in an in vitro sample contacted with a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof as compared to a matched sample not contacted with the compound(s).
Inhibition of B-cell prolifération also refers to observable inhibition of B-cell prolifération in a standard thymidine incorporation assay for B-cell prolifération, e.g. such assay as known in the art. In some embodiments, the compounds described herein, e.g. a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, has an IC50 value less than or equal to 10 micromolar, such as 1 nM to 10 μΜ or 10 nM to 10 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an ICso value less than or equal to less than 1 micromolar, such as 1 nM to 1 μΜ or 10 nM to 1 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an ICso value less than or equal to 500 nanomolar, such as 1 nM to 500 nM or 10 nM to 500 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an IC50 value less than or equal to 200 nanomolar, such as 1 nM to 200 nM or 10 nM to 200 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an IC50 value less than or equal to 100 nanomolar, such as 1 nM to 100 nM or 10 nM to 100 nM.
The “réduction in basophil activation” refers to the ability of compounds as described herein to reduce the activation of basophiis. Basophil activation is involved, for example, in inflammatory and autoimmune diseases as described herein, and the réduction of activation of basophiis is desired in compounds as described herein, e.g. a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. The activation of basophiis can be assessed by the measurement of CD63 expression by basophiis, such as by a CD63 human whole blood basophil cellular assay (25% blood), e.g. such as the assay described in Example 9 below.
In some embodiments, the compound described herein e.g. a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, has an ECso value in a suitable CD63 assay of less than or equal to 10 micromolar, such as 1 nM to 10 μΜ or 10 nM to 10 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof, has an ECso value less than or equal to less than 1 micromolar, such as 1 nM to 1 μΜ or 10 nM to 1 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an ECso value less than or equal to 500 nanomolar, such as 1 nM to 500 nM or 10 nM to 500 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an ECso value less than or equal to 200 nanomolar, such as 1 nM to 200 nM or 10 nM to 200 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an ECso value less than or equal to 150 nanomolar, such as 1 nM to 150 nM or 10 nM to 150 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or cocrystal thereof has an ICso value less than or equal to 100 nanomolar, such as 1 nM to 100 nM or 10 nM to 100 nM. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has an ECso value less than or equal to 75 nanomolar, such as 1 nM to 75 nM or 10 nM to 75 nM. In some embodiments, the ECso value is measured as described in the assay of Example 9.
The “kinetic solubility” refers to an assessment of the solubility of a compound in a suitable buffer, such as phosphate bufifer at pH 7.4, at a given température, for example at 37 °C. In one instance, kinetic solubility is measured at 37 °C in phosphate buffer at pH 7.4, such as by the assay as described in Example 10.
In some embodiments, the compounds described herein, e.g. a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, has a kinetic solubility at 3 7 °C in phosphate bufifer at pH 7.4 of greater than or equal to 10 μΜ, such as 10 μΜ to 500 μΜ or 10 μΜ to 250 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has a kinetic solubility at 37 °C in phosphate buffer at pH 7.4 of greater than or equal to 20 μΜ, such as 20 μΜ to 500 μΜ or 20 μΜ to 250 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has a kinetic solubility at 37 °C in phosphate buffer at pH 7.4 of greater than or equal to 30 μΜ, such as 30 μΜ to 500 μΜ or 30 μΜ to 250 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has a kinetic solubility at 37 °C in phosphate buffer at pH 7.4 of greater than or equal to 40 μΜ, such as 40 μΜ to 500 μΜ or 40 μΜ to 250 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has a kinetic solubility at 37 °C in phosphate buffer pH 7.4 of greater than or equal to 50 μΜ, such as 50 μΜ to 500 μΜ or 50 μΜ to 250 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has a kinetic solubility at 37 °C in phosphate buffer at pH 7.4 of greater than or equal to 60 μΜ, such as 60 μΜ to 500 μΜ or 60 μΜ to 250 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has a kinetic solubility at 37 °C in phosphate buffer at pH 7.4 of greater than or equal to 70 μΜ, such as 70 μΜ to 500 μΜ or 70 μΜ to 250 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has a kinetic solubility at 37 °C in phosphate buffer at pH 7.4 of greater than or equal to 80 μΜ, such as 80 μΜ to 500 μΜ or 80 μΜ to 250 μΜ. In some embodiments, the compound or a pharmaceutically acceptable sait or co-crystal thereof has a kinetic solubility at 37 °C in phosphate buffer at pH 7.4 of greater than or equal to 90 μΜ, such as 90 μΜ to 500 μΜ or 90 μΜ to 250 μΜ. In some embodiments, the kinetic solubility is measured by the assay as described in Example 10.
The “human hépatocyte stability” is a measure ofthe stability ofthe compounds to metabolism by human hépatocytes, and is assessed as the predicted hepatic plasma clearance ofthe compounds in L/hr/kg. The predicted hépatocyte clearance can be measured, far example, by the assay described in Example 11.
In some embodiments, the compounds described herein, e.g. a compound of Formula I or of Formula Π has a predicted hepatic plasma clearance of less than or equal to 0.50 L/hr/kg, such as 0.005 L/hr/kg to 0.50 L/hr/kg or 0.01 L/hr/kg to 0.50 L/hr/kg. In some embodiments, the compound has a predicted hepatic plasma clearance of less than or equal to 0.40 L/hr/kg, such as 0.005 L/hr/kg to 0.40 L/hr/kg or 0.01 L/hr/kg to 0.40 L/hr/kg. In some embodiments, the compound has a predicted hepatic plasma clearance of less than or equal to 0.30 L/hr/kg, such as 0.005 L/hr/kg to 0.30 L/hr/kg or 0.01 L/hr/kg to 0.30 L/hr/kg. In some embodiments, the compound has a predicted hepatic plasma clearance of less than or equal to 0.20 L/hr/kg, such as 0.005 L/hr/kg to 0.20 L/hr/kg or 0.01 L/hr/kg to 0.20 L/hr/kg. In some embodiments, the compound has a predicted hepatic plasma clearance of less than or equal to 0.10 L/hr/kg, such as 0.005 L/hr/kg to 0.10 L/hr/kg or 0.01 L/hr/kg to 0.10 L/hr/kg. In some embodiments, the compound has a predicted hepatic plasma clearance of less than or equal to 0.09 L/hr/kg, such as 0.005 L/hr/kg to 0.09 L/hr/kg or 0.01 L/hr/kg to 0.09 L/hr/kg. In some embodiments, the compound has a predicted hepatic plasma clearance of less than or equal to 0.08 L/hr/kg, such as 0.005 L/hr/kg to 0.08 L/hr/kg or 0.01 L/hr/kg to 0.08 L/hr/kg. In some embodiments, the compound has a predicted hepatic plasma clearance of less than or equal to 0.07 L/hr/kg, such as 0.005 L/hr/kg to 0.07 L/hr/kg or 0.01 L/hr/kg to 0.07 L/hr/kg. In some embodiments, the compound has a predicted hepatic plasma clearance of or less than or equal to 0.06 L/hr/kg, such as 0.005 L/hr/kg to 0.06 L/hr/kg or 0.01 L/hr/kg to 0.06 L/hr/kg. In some embodiments, the predicted hépatocyte clearance is measured by the assay described in Example 11.
An allergy or “allergie disorder” refers to acquired hypersensitivity to a substance (allergen). Allergie conditions include eczema, allergie rhinitis or coryza, hay fever, bronchial asthma, urticaria (hives) and food allergies, and other atopie conditions.
Asthma refers to a disorder of the respiratory System characterized by inflammation, narrowing of the airways and increased reactivity of the airways to inhaled agents. Asthma is frequently, although not exclusively associated with atopie or allergie symptoms.
By “significant” is meant any détectable change that is statistically significant in a standard parametric test of statistical significance such as Student’s T-test, where p < 0.05.
A “disease responsive to inhibition of Syk activity” is a disease in which inhibiting Syk kinase provides a therapeutic benefit such as an amelioration of symptoms, decrease in disease progression, delay of disease onset, or inhibition of aberrant activity of certain cell-types (monocytes, B-cells, and mast cells).
“Subject” refers to an animal, such as a mammal, that has been or will be the object of treatment, observation or experiment. The methods described herein may be usefiil in both human therapy and veterinary applications. In some embodiments, the subject is a mammal; in some embodiments the subject is human; and in some embodiments the subject is chosen from cats and dogs. “Subject in need thereof’ or “human in need thereof’ refers to a subject, such as a human, who may hâve or is suspected to hâve diseases or conditions that would benefit from certain treatment; for example treatment with a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, as described herein. This includes a subject who may be determined to be at risk of or susceptible to such diseases or conditions, such that treatment would prevent the disease or condition from developing.
“Treatment” or “treating” is an approach for obtaining bénéficiai or desired results including clinical results. Bénéficiai or desired clinical results may include one or more of the following:
(i) inhibiting the disease or condition (e.g., decreasing one or more symptoms resulting from the disease or condition, and/or diminishing tire extent of the disease or condition);
(ii) slowing or arresting the development of one or more clinical symptoms associated with the disease or condition (e.g., stabilizing the disease or condition, preventing or delaying the worsening or progression of the disease or condition, and/or preventing or delaying the spread (e.g., metastasis) of the disease or condition); and/or (iii) relieving the disease, that is, causing the régression of clinical symptoms (e.g., ameliorating the disease State, providing partial or total remission of the disease or condition, enhancing effect of another médication, delaying the progression of the disease, increasing the quality of life, and/or prolonging survival).
“Delaying” the development of a disease or condition means to defer, hinder, slow, retard, stabilize, and/or postpone development of the disease or condition. This delay can be of varying lengths of time, depending on die history of the disease or condition, and/or subject being treated. A method that “delays” development of a disease or condition is a method that reduces probability of disease or condition development in a given time frame and/or reduces the extent of the disease or condition in a given time frarne, when compared to not using the method. Such comparisons are typically based on clinical studies, using a statistically significant number of subjects. Disease or condition development can be détectable using standard methods, such as routine physical exams, mammography, imaging, or biopsy. Development may also refer to disease or condition progression that may be initi ally undetectable and includes occurrence, récurrence, and onset.
In many cases, the compounds of this disclosure are capable of forming acid and/or base salts by virtue of the presence of amino and/or carboxyl groups or groups similar thereto.
“Pharmaceutically acceptable salts” include, for example, salts with inorganic acids and salts with an organic acid. Examples of salts may include hydrochloride, phosphate, diphosphate, hydrobromide, sulfate, sulfinate, nitrate, malate, maleate, fumarate, tartrate, succinate, citrate, acetate, lactate, methanesulfonate (mesylate), benzenesuflonate (besylate), p-toluenesulfonate (tosylate), 2-hydroxyethylsulfonate, benzoate, salicylate, stéarate, and alkanoate (such as acetate, HOOC-(CH2)n-COOH where n is 0-4). In addition, if the compounds described herein are obtained as an acid addition sait, the free base can be obtained by basifying a solution of the acid sait. Conversely, if the product is a free base, an addition sait, particularly a pharmaceutically acceptable addition sait, may be produced by dissolving the free base in a suitable organic solvent and treating the solution with an acid, in accordance with conventional procedures for preparing acid addition salts from base compounds. Those skilled in the art will recognize various synthetic méthodologies that may be used to préparé nontoxic pharmaceutically acceptable addition salts.
The compound of Formula I or the compound of Formula Π can also be a pharmaceutically acceptable co-crystal or a co-crystal sait. The “co-crystal” or “cocrystal sait” as used herein means a crystalline material composed of two or more unique solids at room température, each of which has distinctive physical characteristics such as structure, melting point, and heats of fusion, hygroscopicity, solubility, and stability. A cocrystal or a co-crystal sait can be produced according to a per se known co-crystallization method. The terms co-crystal (or cocrystal) or co-crystal sait also refer to a multicomponent System in which there exists a host API (active pharmaceutical ingrédient) molécule or molécules, such as a compound of Formula I, and a guest (or co former) molécule or molécules. In particular embodiments said pharmaceutically acceptable co-crystal of the compound of Formula I or of the compound of Formula Π with a co-former molécule is in a crystalline form selected from a malonic acid co-crystal, a succinic acid co-crystal, a decanoic acid co-crystal, a salicylic acid co-crystal, a vanillic acid co-crystal, a maltol co-crystal, or a glycolic acid co-crystal. Co-crystals may hâve improved properties as compared to the parent form (i.e., the free molécule, zwitter ion, etc.) or a sait of the parent compound. Improved properties can include increased solubility, increased dissolution, increased bioavailability, increased dose response, decreased hygroscopicity, a crystalline form of a normally amorphous compound, a crystalline form of a difficult to sait or unsaltable compound, decreased form diversity, more desired morphology, and the like.
The term crystal forms and related terms herein refer to the various crystalline modifications of a given substance, including, but not limited to, polymorphs, solvatés, hydrates, co-crystals, and other molecular complexes, as well as salts, solvatés of salts, hydrates of salts, other molecular complexes of salts, and polymorphs thereof Crystal forms of a substance can be obtained by a number of methods, as known in the art. Such methods include, but are not limited to, melt recrystallization, melt cooling, solvent recrystallization, recrystallization in confined spaces such as, e.g., in nanopores or capillaries, recrystallization on surfaces or templates, such as, e.g., on polymers, recrystallization in the presence of additives, such as, e.g., co-crystal counter-molecules, desolvation, déhydration, rapid évaporation, rapid cooling, slow cooling, vapor diffusion, sublimation, grinding and solvent-drop grinding.
As used herein, “pharmaceutically acceptable excipient” is a pharmaceutically acceptable vehicle that includes, without limitation, any and ail carriers, solvents, dispersion media, coatings, antibacterial and antifungal agents, isotonie and absorption delaying agents and the like. The use of such media and agents for pharmaceutically active substances is well known in the art. Except insofar as any conventional media or agent is incompatible with the active ingrédient, its use in the therapeutic compositions is contemplated. Supplementary active ingrédients can also be incorporated into the compositions.
The term “carrier” refers to an excipient or vehicle that includes without limitation diluents, disintegrants, précipitation inhibitors, surfactants, glidants, binders, lubricants, and the like with which the compound is administered. Carriers are generally described herein and also in “Remington's Pharmaceutical Sciences” by E.W. Martin. Examples of carriers include, but are not limited to, aluminum monostearate, aluminum stéarate, carboxymethylcellulose, carboxymethylcellulose sodium, crospovidone, glyceryl isostearate, glyceryl monostearate, hydroxyethyl cellulose, hydroxyethyl cellulose, hydroxymethyl cellulose, hydroxyoctacosanyl hydroxystearate, hydroxypropyl cellulose, hydroxypropyl cellulose, hydroxypropyl methylcellulose, lactose, lactose monohydrate, magnésium stéarate, mannitol, microcrystalline cellulose, poloxamer 124, poloxamer 181, poloxamer 182, poloxamer 188, poloxamer 237, poloxamer 407, povidone, Silicon dioxide, colloïdal Silicon dioxide, silicone, silicone adhesive 4102, and silicone émulsion. It should be understood, however, that the carriers selected for the pharmaceutical compositions, and the amounts of such carriers in the composition, may vary depending on the method of formulation (e.g., dry granulation formulation, solid dispersion formulation).
The term “diluent” generally refers to a substance that is used to dilute the compound of interest prior to delivery. Diluents can also serve to stabilize compounds. Examples of diluents may include starch, saccharides, disaccharides, sucrose, lactose, polysaccharides, cellulose, cellulose ethers, hydroxypropyl cellulose, sugar alcohols, xylitol, sorbitol, maltitol, microcrystalline cellulose, calcium or sodium carbonate, lactose, lactose monohydrate, dicalcium phosphate, cellulose, compressible sugars, dibasic calcium phosphate dehydrate, mannitol, microcrystalline cellulose, and tribasic calcium phosphate.
The term “disintegrant” generally refers to a substance which, upon addition to a solid préparation, facilitâtes its break-up or disintegration after administration and permits the release of an active ingrédient as efficiently as possible to aliow for its rapid dissolution. Examples of disintegrants may include maize starch, sodium starch glycolate, croscarmellose sodium, crospovidone, microcrystalline cellulose, modified com starch, sodium carboxymethyl starch, povidone, pregelatinized starch, and alginic acid.
The term “précipitation inhibitors” generally refers to a substance that prevents or inhibits précipitation of the active agent from a supersaturated solution. One example of a précipitation inhibitor includes hydroxypropylmethylcellulose (HPMC).
The term “surfactants” generally refers to a substance that lowers the surface tension between a liquid and a solid that could improve the wetting of the active agent or improve the solubility of the active agent. Examples of surfactants include poloxamer and sodium lauiyl sulfate.
The term “glidant” generally refers to substances used in tablet and capsule formulations to improve flow-properties during tablet compression and to produce an anticaking effect. Examples of glidants may include colloïdal Silicon dioxide, talc, fumed silica, starch, starch dérivatives, and bentonite.
The term “bindef” generally refers to any pharmaceutically acceptable film which can be used to bind together the active and inert components of the carrier together to maintain cohesive and discrète portions. Examples of binders may include hydroxypropylcellulose, hydroxypropylmethylcellulose, povidone, copovidone, and ethyl cellulose.
The term “lubricant” generally refers to a substance that is added to a powder blend to prevent the compacted powder mass from sticking to the equipment during the tableting or encapsulation process. A lubricant can aid the éjection of the tablet form the dies, and can improve powder flow. Examples of lubricants may include magnésium stéarate, stearic acid, silica, fats, calcium stéarate, polyethylene glycol, sodium stearyl fiimarate, or talc; and solubilizers such as fatty acids including lauric acid, oleic acid, and Ce/Cio fatty acid.
Compounds
Compounds are provided here and elsewhere throughout, such as in the Summary and in the Examples.
The compounds provided herein are named using ChemBioDraw Ultra 12.0, and one skilled in the art understands that the compound structure may be named or identified using other commonly recognized nomenclature Systems and symbols including CAS and IUPAC.
In some embodiments of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, R2 is H. In some embodiments of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, R2 is 2hydroxyethoxyl.
In some embodiments of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, R3 is H. In some embodiments of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, R3 is methyl.
In some embodiments of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, R4 is H or methyl. In some embodiments of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, R4 is H. In some embodiments of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, R4 is methyl.
In some embodiments of the compound of Formula L, or a pharmaceutically
In some embodiments, R1 is * . In some embodiments, R1 is
Separate embodiments herein, each providing a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, in which R1 is selected from the
group consisting of * , * , and * , include embodiments A-l through A-27 wherein R2, R3, and R4 are as defined in Table A for each of the embodiments.
Table A
Embodiment No. | R1 selected from | R2 | R3 | R4 |
A-l | C„ HCL \ > û û'O 'h 7 a V 1 , J , and I ★ | H or 2hydroxyethoxyl | H or methyl | H or methyl |
A-2 | / \ X \ / „ 1 0 Qlp 1 , J ,and * | Hor2hydroxyethoxyl | H | H or methyl |
A-3 | / ? γ' ^x^X W U 0 o 1 , | ,and 1 * r | H or 2hydroxyethoxyl | methyl | H or methyl |
A-4 | A MO Y A r . Ο O'O X X^ j , · ,and * | Hor2hydroxyethoxyl | H or methyl | H |
A-5 | s. M ^^X 0 9 1 1 >and * ★ ' | Hor2hydroxyethoxyl | H or methyl | Methyl |
A-6 | 1 4-Y~ Z-Y \> i \__/ \Z - à / X .-0,-/-7 ï /-î *-J \ \ y | Hor2hydroxyethoxyl | H | H |
A-7 | <A A γ oh xX 1 k>x Cl O 0 7X 7 H * 1 , J , and a * ’ * | Hor2hydroxyethoxyl | H | methyl |
A-8 I | Ο Ί 9 J Ιλ 9 0 9 I j l j , | ,and ♦ | Hor2hydroxyethoxyl | methyl | H |
A-9 | X-S Y/ T *°·^ OH 1 1 1 r Ο Ο Ό , ! .- ! | Hor2hydroxyethoxyl | methyl | methyl |
A-IO | ho.. ΥΎ » y 0 o ; , I .and * | H | H or methyi | H or methyi |
A-ll | z^x 1 f!H C c; 0 J , 4 ,and * | H | H | H or methyi |
A-12 | z0' ^Y *Y zU OH J. 1 l Λ O O U h 7 , । , J , and * | H | methyi | H or methyi |
A-13 | P. HO. / X X !0'^vZ^Y c>< ζ-Ύ \ L>, /°>v U cp.Q 1 , J » and > | H | H or methyi | H |
A-14 | 0^ hO Υ^Ά ? C û'O 1 □ i 1 , 4 ,and * | H | H or methyi | methyi |
A-15 | i-O Yi<o0\ Û û'O I J î 4 ,and | H | H | H |
A-16 | hcl < > | | 1>I xM\ M Q O 0 h » l , J , and i | H | methyl | H |
A-17 | HO O 1 [ \/χ r:H O O 0 , 1 » and ★ | H | H | methyl |
A-18 | z°\ \ / | [ ^χζχ CH A 1 k O Ci U >r * 1 , J ,and 4 | H | methyl | methyl |
A-19 | P. MX Ί I ^xZx œ Z' «x. N Χ'θχ O O U » » ί 1 , J , and À· ♦ | 2-hydroxyethoxyl | H or methyl | H or methyl |
A-20 | P. HO^ ,ζ x x ^Xx^X CH 1 ^*r ΧθΧ Ç O U h 1 . 1 1 , I ,and * | 2-hydroxyethoxyl | H | H or methyl |
A-21 | ZO rO ^Xx-'^ O Ci 0 N | I · ,and ★ ♦ ’ * | 2-hydroxyethoxyl | methyl | H or methyl |
A-22 | û û'O J . | ,and * | 2-hydroxyethoxyl | H or methyl | H |
A-23 | A Κχ 1 MO*s^X OH Z< 1 k/\ O O 0 , 4 , and 4 | 2-hydroxyethoxyl | H or methyl | methyl |
A-24 | O- !> r\ r / \ î ; & __ . o' 2--2 x-+ '· Z \_J | 2-hydroxyethoxyl | H | H |
A-25 | J\ ΗΟχ T ‘“Z ^-Z OH 1 1 Λ O O 0 N i j t 1 . 1 ,and * | 2-hydroxyethoxyl | methyl | H |
A-26 | Z0'. •«'sZk oh Z X. N C 0 0 1 J ί 1 , 4 ’ and a | 2-hydroxyethoxyl Ί | H | methyl |
A-27 | OH M rfi^ Ζθ\ O O 0 1 , · .and 1 | 2-hydroxyethoxyl | methyl | methyl |
Separate embodiments herein, each providing a compound of Formula I, or
a pharmaceutically acceptable sait or co-crystal thereof, in which R1 is * , include embodiments B-l through B-27 wherein R2, R3, and R4 are as defined in Table B for each of the embodiments.
Table B
Embodiment No. | R1 | R2 | R3 | R4 |
B-l | 0 N | H or 2hydroxyethoxyl | H or methyl | H or methyl |
B-2 | 0 N | H or 2hydroxyethoxyl | H | H or methyl |
B-3 | û | H or 2hydroxyethoxyl | methyl | H or methyl |
B-4 | û N | Hor2hydroxyethoxyl | H or methyl | H |
B-5 | 0 | H or 2hydroxyethoxyl | H or methyl | Methyl |
B-6 | û n Ii | Hor2hydroxyethoxyl | H | H |
B-7 | Ci n 1 | H or 2hydroxyethoxyl | H | methyl |
B-8 | 0 1 | H or 2hydroxyethoxyl | methyl | H |
B-9 | Ci | Hor2hydroxyethoxyl | methyl | methyl |
B-10 | 0 | H | H or methyl | H or methyl |
B-l 1 | û N 1^ | H | H | H or methyl |
B-12 | 0 n 1 | H | methyl | H or methyl |
B-13 | 0 1 | H | H or methyl | H |
B-14 | û N 1 * | H | H or methyl | methyl |
B-l 5 | 0 1 * | H | H | H |
B-16 | O Ÿ c) | H | methyl | H |
B-17 | 0 1^ | H | H | methyl |
B-18 | 0 1 | H | methyl | methyl |
B-19 | ^p^ û N | 2-hydroxyethoxyl | H or methyl | H or methyl |
B-20 | ^p^ 0 1 * | 2-hydroxyethoxyl | H | H or methyl |
B-21 | û n' ! | 2-hydroxyethoxyl | methyl | H or methyl |
B-22 | ^p^ 0 | 2-hydroxyethoxyl | H or methyl | H |
B-23 | û 1 * | 2-hydroxyethoxyl | H or methyl | methyl |
B-24 | 0 | 2-hydroxyethoxyl | H | H |
B-25 | û N 1 | 2-hydroxyethoxyl | methyl | H |
B-26 | 0 N 1 | 2-hydroxyethoxyl | H | methyl |
B-27 n | 0 | 2-hydroxyethoxyl | methyl | methyl |
Separate embodiments herein, each providing a compound of Formula I, or
a pharmaceutically acceptable sait or co-crystal thereoC in which R1 is include embodiments C-l through C-27 wherein R2, R3, and R4 are as defined in Table C for each of the embodiments.
Table C
Embodiment No. | R1 | R2 | R3 | R4 |
C-l | Ί ό | H or 2hydroxyethoxyl | H or methyl | H or methyl |
C-2 | HO c': N 1 * | H or 2hydroxyethoxyl | H | H or methyl |
C-3 | HO 0 X | H or 2hydroxyethoxyl | methyl | H or methyl |
C-4 | HO û N 1 * | H or 2hydroxyethoxyl | H or methyl | H |
C-5 | HO Ci N | H or 2hydroxyethoxyl | H or methyl | Methyl |
C-6 | HO h° JL û N * | H or 2hydroxyethoxyl | H | H |
C-7 | HO û N 1 | Hor2hydroxyethoxyl | H | methyl |
C-8 | HO «A Û N 1 ★ | Hor2hydroxyethoxyl | methyl | H |
C-9 | HO -A 0 | Hor2hydroxyethoxyl | methyl | methyl |
C-10 | HO -A 0 N | H | H or methyl | H or methyl |
C-ll | HO -A 0 | H | H | H or methyl |
C-12 | HO HO JL 0 1^ | H | methyl | H or methyl |
C-13 | HO 0 N X | H | H or methyl | H |
C-14 | HO 0 1 * | H | H or methyl | methyl |
C-15 | HO HCk /J\ û N | H | H | H |
C-16 | HO 0 N | H | methyl | H |
C-17 | HO û N X | H | H | methyl |
C-18 | HO HQ. û N | H | methyl | methyl |
C-19 | HO 0 N ) ★ | 2-hydroxyethoxyl | H or methyl | H or methyl |
C-20 | HO 0 'N 1 | 2-hydroxyethoxyl | H | H or methyl |
C-21 | HO 0 N - i | 2-hydroxyethoxyl | methyl | H or methyl |
C-22 | HO C: N | 2-hydroxyethoxyl | H or methyl | H |
C-23 | HO « 1 û N X | 2-hydroxyethoxyl | H or methyl | methyl |
C-24 | HO HO. 0 1 * | 2-hydroxyethoxyl | H | H |
C-25 | HO HO\ 0 X | 2-hydroxyethoxyl | methyl | H |
C-26 | HO 0 n X | 2-hydroxyethoxyl | H | methyl |
C-27 | HO HC< ce N 1 * | 2-hydroxyethoxyl | methyl | methyl |
Separate embodiments herein, each providing a compound of Formula I, or
OH
a pharmaceutically acceptable sait or co-crystal thereof, in which R1 is * , include embodiments D-l through D-27 wherein R2, R3, and R4 are as defined in Table D for each of the embodiments.
Table D
Embodiment No. | R’ | R2 | R3 | R4 |
D-l | » Y N 1 _______*_____ | H or 2hydroxyethoxyl | H or methyl | H or methyl |
D-2 | OH Y N 1 * | H or 2hydroxyethoxyl | H | H or methyl |
D-3 | OH NT 1 * | H or 2hydroxyethoxyl | methyl | H or methyl |
D-4 | OH kû 1 * | Hor2hydroxyethoxyl | H or methyl | H |
D-5 | OH ’Ό 1- | Hor2hydroxyethoxyl | H or methyl | Methyl |
D-6 | OH Y N | H or 2hydroxyethoxyl | H | H |
D-7 | OH 'Ό 1 * | H or 2hydroxyethoxyl | H | methyl |
D-8 | OH kû X | H or 2hydroxyethoxyl | methyl | H |
D-9 | OH Y n | H or 2hydroxyethoxyl | methyl | methyl |
D-10 | OH 'Ό N 1 * | H | H or methyl | H or methyl |
D-ll | OH kû . . i | H | H | H or methyl |
D-12 | OH kû N 1 « | H | methyl | H or methyl |
D-13 | OH ’O N 1 ★ | H | H or methyl | H |
D-14 | OH ''Û . i________ | H | H or methyl | methyl |
D-15 | OH Y N 1 * | H | H | H |
D-16 | OH Y N | H | methyl | H |
D-17 | OH Y N 1 * | H | H | methyl |
D-18 | OH kû in 1 . * | H | methyi | methyi |
D-19 | OH kû N | 2-hydroxyethoxyl | H or methyi | H or methyi |
D-20 | OH 'Ό N 1 * | 2-hydroxyethoxyl | H | H or methyi |
D-21 | OH kû N 1 ★ | 2-hydroxyethoxyl | methyi | H or methyi |
D-22 | OH Y 1 -* | 2-hydroxyethoxyl | H or methyi | H |
D-23 | OH 'Ό 1 * | 2-hydroxyethoxyl | H or methyi | methyi |
D-24 | OH kû | 2-hydroxyethoxyl | H | H |
D-25 | OH 'Ό N 1 * | 2-hydroxyethoxyl | methyi | H |
D-26 | OH 'Ό N 1 * | 2-hydroxyethoxyl | H | methyi |
D-27 | OH 'Ό 1 * | 2-hydroxyethoxyl | methyl | methyl |
Embodiments herein that refer to the compound of Formula I or of Formula Il in one aspect also refer to a pharmaceutically acceptable sait or co-crystal of the compound of Formula I or of Formula Π, even if not explicitly stated as such.
Also provided herein is a compound of Formula Π:
Formula Π or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, wherein:
R10 is selected from the group consisting of * , * , and wherein * indicates the carbon atom of the indicated phenyl ring of Formula Π to which R1 is attached;
R20 is H or 2-hydroxyethoxyl;
R30 is H or methyl; and
R40 is H, halogen (i.e. F, Cl, Br, or I), methyl, or halo substituted methyl (i.e. methyl wherein 1 to 3 hydrogen atoms are substituted by 1 to 3 halogen atoms, which may be the same or different, e.g. fluoromethyl, chloromethyl, difluoromethyl, dichloromethyl, chlorofluoromethyl, trifluoromethyl, and the like).
In some embodiments of the compound of Formula Π, or a pharmaceutically
acceptable sait thereof, R10 is selected from the group consisting of * , o
and * . In some embodiments, R10 is * . In some embodiments, R10 is
* . In some embodiments, R10 is * . Within each of the embodiments described herein comprising a compound of Formula Π, there is a further embodiment wherein each of R20, R30, and R40 is H. Within each of the embodiments described herein comprising a compound of Formula Π, there is a another embodiment wherein R20 is H, R30 is methyl, and R40 is H. Within each of the embodiments described herein comprising a compound of Formula Π, there is also another embodiment wherein R20 is H, R30 is H, and
R40 is methyl. Within each of the embodiments described herein comprising a compound of
Formula Π, there is still another embodiment wherein R20 is 2-hydroxyethoxyl, R30 is methyl, and R40 is H. Within each of the embodiments described herein comprising a compound of Formula Π, there is still another embodiment wherein R20 is 244 hydroxyethoxyl, R30 is methyl, and R40 is H. Within each of the embodiments described herein comprising a compound of Formula Π, there is still further embodiment wherein R20 is 2-hydroxyethoxyl, R30 is H, and R40 is methyl.
Représentative compounds of the invention are listed in Table A below. The compounds in Table A are named using ChemBioDraw Ultra 12.0 and it should be understood that other names be used to identify compounds of the same structure. Other compounds or radicals may be named with common names, or systematic or non-systematic names. The compounds may also be named using other nomenclature Systems and symbols that are commonly recognized in the art of chemistry including, for example, Chemical
Abstract Service (CAS) and International Union of Pure and Applied Chemistry (IUPAC). Any ambiguity in naming of compounds can be resolved by deferring to the structure, where provided.
Table A. Représentative Compounds
Structure | Name |
°Λ L 1 H2N NxJ^N^Z II | 6-(6-amino-5-methylpyrazin-2-yl)-N-(4-(4-(oxetan3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8amine |
/-0 z\ z 0 Z | 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l -yl)phenyl)imidazo[l ,2-a]pyrazin-8amine |
T Ο / τ Z-Q z O : ; ; I .. . | (R)-(4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2a]pyrazin-8-yl)amino)phenyl)morpholin-2yl)methanol |
s' J O __/z ô 1 (x z | 6-(6-aminopyrazin-2-yl)-5-methyl-N-(4-(4-(oxetan3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8amine |
Ο-Λ HO 11 '^^'O'^^'NH NZ\ Z __ | 2-(5-((6-(6-aminopyrazin-2-yl)imidazo[l ,2a]pyrazin-8-yl)amino)-2-(4-(oxetan-3-yl)piperazin-lyl)phenoxy)ethanol |
O.....on Z^NH Λδ H2N N M | 2-((4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2a]pyrazin-8-yl)amino)phenyl)piperazin-lyl)methyl)propane-l ,3-diol |
x \ A ° / ? ( Z °W H^ Z fVπ (x Z | 2-(5-((6-(6-ammo-5-methylpyrazin-2-yl)imidazo[l,2a]pyrazin-8-yl)amino)-2-(4-(oxetan-3 -yl)piperazin-1 yl)phenoxy)ethanol |
An embodiment the invention provides 6-(6-aminopyrazin-2-yl)-N-(4-(4(oxetan-3-yl)piperazin-l -yl)phenyl)imidazo[l ,2-a]pyrazin-8-amine, pharmaceutically acceptable salts, pharmaceutically acceptable co-ciystals, pharmaceutically acceptable esters, pharmaceutically acceptable solvatés, hydrates, enantiomers, mixture of enantiomers, tautomers, polymorphe, and pharmaceutically acceptable prodrugs thereof. An embodiment ofthe invention provides 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine or a pharmaceutically acceptable sait or co-crystal thereof. An embodiment the invention provides 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine or a pharmaceutically acceptable sait thereof.
The invention provides 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazinl-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine mesylate, for example 6-(6-aminopyrazin-2-yl)N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine monomesylate. For example, the invention provides 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine monomesylate Form I, which may be characterized by XRPD peaks at about 19.7, about 17.3, about 17.9, about 21.6, and about 25.8 (2theta degrees). Also provided is 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine monomesylate Form Π, which may be characterized by XRPD peaks at about 17.3, about 25.1, about 20.4, about 19.6 and about 18.5 (2theta degrees).
An embodiment of the présent invention provides 6-(6-aminopyrazin-2-yl)-N-(4(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine succinate. For example the invention provides 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine succinate Form I, which may be characterized by XRPD peaks at about 16.5, about 24.5, about 17.7, about 28.4 and about 21.8 (2theta degrees). The invention also provides 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine succinate Form Π, which may be characterized by XRPD peaks at about 25.0, about 16.3, about 22.0, about 7.9, and about 7.6 (2theta degrees).
The term “about” as used in relation to XRPD peaks means, for example, ± 0.2, ± 0.1, ± 0.05 (2theta degrees) etc.
The compounds described herein, e.g. a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a compound of Formula Π, or a pharmaceutically acceptable sait or co-crystal thereof, provide distinct advantages as Syk inhibitors. The compounds described herein are inhibitors of Syk kinase activity, as measured, for example, as the inhibition of Syk kinase activity in a biochemical assay or as the réduction in basophil activation as measured by CD63 expression, as described in the Examples. The compounds described herein also hâve désirable properties for use as a pharmaceutical, including kinetic solubility at 37 °C in phosphate buffer at pH 7.4 and low levels of hépatocyte clearance. These features resuit in Syk inhibitors for treatment of disease with pharmacokinetic characteristics that provide a therapeutic window such that the compounds can be effective in smaller doses than currently known compounds. As such, the compounds provide effective doses with minimal off target activity, which may reduce unwanted side effects, lessen the chance of drug-drug interactions, and increase a subject’s compliance with a given therapeutic regimen.
In some embodiments, the compounds described herein, e.g. a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a compound of Formula Π, or a pharmaceutically acceptable sait or co-crystal thereof, is effective in one or more of Syk kinase activity inhibition or réduction of basophil activation as measured by CD63 expression, for example, the compound inhibits Syk kinase activity with an ICso value less than or equal to 1 micromolar, less than or equal to 500 nanomolar, less than or equal to 200 nanomolar, less than or equal to 100 nanomolar, less than or equal to 50 nanomolar, less than or equal to 20 nanomolar, or less than or equal to 10 nanomolar, as demonstrated by a suitable assay for Syk kinase activity, such as the assay as described in Example 12; and/or reduces CD63 expression activity with an ECso value less than or equal to 1 micromolar, less than or equal to 500 nanomolar, less than or equal to 200 nanomolar, less than or equal to 150 nanomolar, less than or equal to 100 nanomolar, or less than or equal to 75 nanomolar, as demonstrated by a suitable assay for the measurement of CD63 expression in basophiis, such as the assay as described in Example 9.
In some embodiments, the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, is effective in both of Syk kinase inhibition and réduction of CD63 expression, for example, the compound has Syk kinase activity with an IC50 value less than or equai to 1 micromolar, less than or equal to 500 nanomolar, less than or equal to 200 nanomolar, less than or equal to 100 nanomolar, less than or equal to 50 nanomolar, less than or equal to 20 nanomolar, or less than or equal to 10 nanomolar, as demonstrated by a suitable assay for Syk kinase activity, such as the assay as described in Example 12; and has réduction in CD63 expression with an ECso value less than or equal to 1 micromolar, less than or equal to 500 nanomolar, less than or equal to 200 nanomolar, less than or equal to 150 nanomolar, less than or equal to 100 nanomolar, or less than or equal to 75 nanomolar, as demonstrated by a suitable assay for the measurement of CD63 expression in basophils, such as the assay as described in Example 9.
In some embodiments, in addition to having the property of one or more of Syk kinase inhibition or réduction of basophil activation as measured by CD63 expression, including having both of the properties of Syk kinase inhibition and réduction of basophil activation as measured by CD63 expression, the compound of Formulai, or a pharmaceutically acceptable sait or co-crystal thereof, has désirable properties for use as a pharmaceutical, including one or more of kinetic solubility and low levels of hépatocyte clearance. In some embodiments, the compound of Formula I, or a pharmaceutically acceptable sait or co-ciystal thereof, has a désirable property of one or more of kinetic solubility and low levels of hépatocyte clearance, including kinetic solubility at 37 °C in phosphate buffer at pH 7.4 of greater than or equal to 10 μΜ, greater than or equal to 20 μΜ, greater than or equal to 30 μΜ, greater than or equal to 40 μΜ, greater than or equal to 50 μΜ, greater than or equal to 60 μΜ, greater than or equal to 70 μΜ, greater than or equal to 80 μΜ, or greater than or equal to 90 μΜ, as demonstrated by a suitable measure of kinetic solubility, such as the assay as described in Example 10; and/or predicted hépatocyte clearance of less than or equal to 0.50 L/hr/kg, less than or equal to 0.40 L/hr/kg, less than or equal to 0.30 L/hr/kg, less than or equal to 0.20 L/hr/kg, less than or equal to 0.10 L/hr/kg, less than or equal to 0.09 L/hr/kg, less than or equal to 0.08 L/hr/kg, less than or equal to 0.07 L/hr/kg, or less than or equal to 0.06 L/hr/kg, as demonstrated by a suitable measure of predicted hépatocyte clearance, such as the assay as described in Example 11.
In some embodiments, the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, has a désirable property of kinetic solubility, and low levels of hépatocyte clearance, including kinetic solubility at 37 °C in phosphate buffer at pH 7.4 of greater than or equal to 10 μΜ, greater than or equal to 20 μΜ, greater than or equal to 30 μΜ, greater than or equal to 40 μΜ, greater than or equal to 50 μΜ, greater than or equal to 60 μΜ, greater than or equal to 70 μΜ, greater than or equal to 80 μΜ, or greater than or equal to 90 μΜ, as demonstrated by a suitable measure of kinetic solubility, such as the assay as described in Example 10; and predicted hépatocyte clearance of less than or equal to 0.50 L/hr/kg, less than or equal to 0.40 L/hr/kg, less than or equal to 0.30 L/hr/kg, less than or equal to 0.20 L/hr/kg, less than or equal to 0.10 L/hr/kg, less than or equal to 0.09 L/hr/kg, less than or equal to 0.08 L/hr/kg, less than or equal to 0.07 L/hr/kg, or less than or equal to 0.06 L/hr/kg, as demonstrated by a suitable measure of predicted hépatocyte clearance, such as the assay as described in Example 11.
In some embodiments, the compound of Formula L or a pharmaceutically acceptable sait or co-crystal thereof, is effective in both of Syk kinase inhibition and réduction of CD63 expression, and has a désirable property of kinetic solubility, and low levels of hépatocyte clearance, for example, the compound has Syk kinase activity with an IC5o value less than or equal to 1 micromolar, less than or equal to 500 nanomolar, less than or equal to 200 nanomolar, less than or equal to 100 nanomolar, less than or equal to 50 nanomolar, less titan or equal to 20 nanomolar, or less than or equal to 10 nanomolar, as demonstrated by a suitable assay for Syk kinase activity, such as the assay as described in Example 12; and has reduced CD63 expression with an ECso value less than or equal to 1 micromolar, less than or equal to 500 nanomolar, less than or equal to 200 nanomolar, less than or equal to 150 nanomolar, less than or equal to 100 nanomolar, or less than or equal to 75 nanomolar, as demonstrated by a suitable assay for the measurement of CD63 expression in basophils, such as the assay as described in Example 10; and kinetic solubility at 37 °C in phosphate buffer at pH 7.4 of greater than or equal to 10 μΜ, greater than or equal to 20 μΜ, greater than or equal to 30 μΜ, greater than or equal to 40 μΜ, greater than or equal to μΜ, greater than or equal to 60 μΜ, greater than or equal to 70 μΜ, greater than or equal to 80 μΜ, or greater than or equal to 90 μΜ, as demonstrated by a suitable measure of kinetic solubility, such as the assay as described in Example 10; and predicted hépatocyte clearance of less than or equal to 0.50 L/hr/kg, less than or equal to 0.40 L/hr/kg, less than or equal to 0.30 L/hr/kg, less than or equal to 0.20 L/hr/kg, less than or equal to 0.10 L/hr/kg, less than or equal to 0.09 L/hr/kg, less than or equal to 0.08 L/hr/kg, less than or equal to 0.07 L/hr/kg, or less than or equal to 0.06 L/hr/kg, as demonstrated by a suitable measure of predicted hépatocyte clearance, such as the assay as described in Example 11.
Methods of Use
The invention provides a compound of Formula I, or a pharmaceutically acceptable sait or co-ciystal thereof, for use in therapy. Provided is a method of treating a subject, for example, a mammal, such as a human, having a disease responsive to inhibition of Syk activity, comprising administrating to the subject having, or suspected of having, such a disease, an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. In one aspect, the subject, such as a human, is administered a pharmaceutical composition comprising a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, and a pharmaceutically acceptable vehicle. The invention further provides a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof for use in such methods.
In some embodiments, the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, may be administered to a subject (e.g., a human) who is at risk or has a family history of the disease or condition.
In some embodiments, the compound of Formula I, or a pharmaceutically acceptable sait or co-ciystal thereof, may also inhibit other kinases, such that disease, disease symptoms, and conditions associated with these kinases are also treated.
Methods of treatment also include inhibiting Syk activity and/ or inhibiting Bcell activity, by inhibiting ATP binding or hydrolysis by Syk or by some other mechanism, in vivo, in a subject suffering from a disease responsive to inhibition of Syk activity, by administering an effective concentration of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. An example of an effective concentration would be that concentration sufficient to inhibit Syk activity in vitro. An effective concentration may be ascertained experimentally, for example by assaying blood concentration of the compound following administration to a human, or theoretically, by calculating bioavailability.
In some embodiments, the condition responsive to inhibition of Syk activity and/ or B-cell activity is cancer, an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction.
Also provided is a method of inhibiting B-cell activity in a subject in need thereof comprising administering an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof.
Also provided is a method of inhibiting B-cell prolifération in a subject in need thereof comprising administering an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof.
Also provided is a method of treating a subject having cancer, an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction, by administering an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof.
In some embodiments, the conditions and diseases that can be treated using a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, include, but are not limited tolymphoma (e.g. small lymphocytic lymphoma (SLL), non-Hodgkin’s lymphoma (NHL), indolent non-Hodgkin’s lymphoma (iNHL), refractory iNHL, mande cell lymphoma (MCL), follicular lymphoma (FL), lymphoplasmacytic lymphoma (LPL), marginal zone lymphoma (MZL), immunoblastic large cell lymphoma, lymphoblastic lymphoma, Splenic marginal zone B-cell lymphoma (+/- villous lymphocytes), Nodal marginal zone lymphoma (+/- monocytoid B-cells), Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue (MALT) type, T-cell lymphoma (e.g. cutaneous T-cell lymphoma, extranodal T-cell lymphoma, anaplastic large cell lymphoma, angioimmunoblastic T-cell lymphoma, mycosis fungoides), B-cell lymphoma, diffuse large B-cell lymphoma (DLBCL), Médiastinal large B-cell lymphoma, Intravascular large B-cell lymphoma, Primary effusion lymphoma, small non-cleaved cell lymphoma, or Burkitt’s lymphoma), multiple myeloma, plasmacytoma, and leukemia (e.g. acute lymphocytic leukemia (ALL), T-cell acute lymphoblastic leukemia (T-ALL), B-cell acute lymphoblastic leukemia (B-ALL), B-cell prolymphocytic leukemia, acute myeloid leukemia (AML), chronic lymphocytic leukemia (CLL), juvénile myelomonocytic leukemia (JMML), minimal residual disease (MRD), hairy cell leukemia, myelofibrosis (e.g. primary or secondary myelofibrosis), or chronic myeloid leukemia (CML), myelodysplastic syndrome (MDS), myeloproliferative disease (MPD), Waldestrom’s macroglobulinemia (WM), polycythemia vera, essential thrombocythemia, pancreatic cancer, urological cancer, bladder cancer, colorectal cancer, colon cancer, breast cancer, prostate cancer, rénal cancer, hepatocellular cancer, thyroid cancer, gall bladder cancer, lung cancer (e.g. non-small cell lung cancer, small-cell lung cancer), ovarian cancer, cervical cancer, gastric cancer, endométrial cancer, esophageal cancer, head and neck cancer, melanoma, neuroendocrine cancer, CNS cancer, brain tumors (e.g., glioma, anaplastic oligodendroglioma, adult glioblastoma multiforme, and adult anaplastic astrocytoma), bone cancer, soft tissue sarcoma, retinoblastomas, neuroblastomas, peritoneal effusions, malignant pleural effusions, mesotheliomas, Wilms tumors, trophoblastic neoplasms, hemangiopericytomas, Kaposi's sarcomas, myxoid carcinoma, round cell carcinoma, squamous cell carcinomas, esophageal squamous cell carcinomas, oral carcinomas, cancers of the adrenal cortex, ACTH-producing tumors, systemic lupus erythematosus (SLE), myestenia gravis, Goodpasture's syndrome, glomerulonephritis, hemorrhage, pulmonary hemorrhage, atherosclerosis, rheumatoid arthritis (RA), psoriatic arthritis, monoarticular arthritis, osteoarthritis, gouty arthritis, spondylitis, Behçet disease, autoimmune thyroiditis, Reynaud’s syndrome, acute disseminated encephalomyelitis, chronic idiopathic thrombocytopénie purpura, multiple sclerosis (MS), Sjôgren’s syndrome, autoimmune hemolytic anémia, tissue graft rejection, hyperacute rejection of transplanted organs, allograft rejection, graft-versus-host disease, diseases involving leukocyte diapedesis, disease States due to leukocyte dyscrasia and metastasis, granulocyte transfusion-associated syndromes, cytokine-induced toxicity, scleroderma, vasculitis, asthma, psoriasis, inflammatory bowel disease (e.g. chronic inflammatory bowel disease, ulcerative colitis, Crohn’s disease, necrotizing enterocolitis), irritable bowel syndrome, dermatomyositis, Addison’s disease, Parkinson’s disease, Alzheimer’s disease, diabètes, type I diabètes mellitus, sepsis, septic shock, endotoxic shock, gram négative sepsis, gram positive sepsis, and toxic shock syndrome, multiple organ injury syndrome secondary to septicemia, trauma, hypovolémie shock, allergie conjunctivitis, vemal conjunctivitis, and thyroid-associated ophthalmopathy, éosinophilie granuloma, eczema, chronic bronchitis, acute respiratory distress syndrome, allergie rhinitis, coryza, hay fever, bronchial asthma, silicosis, pulmonary sarcoidosis, pleurisy, alveolitis, emphysema, pneumonia, bacterial pneumonia, bronchiectasis, and pulmonary oxygen toxicity, reperfusion injury of the myocardium, brain, or extremities, thermal injury, cystic fibrosis, keloid formation or scar tissue formation, fever and myalgias due to infection, and brain or spinal cord injury due to minor trauma, diseases involving leukocyte diapedesis, acute hypersensitivity, delayed hypersensitivity, urticaria, food allergies, skin sunbum, inflammatory pelvic disease, urethritis, uveitis, sinusitis, pneumonitis, encephalitis, meningitis, myocarditis, nephritis, osteomyelitis, myositis, hepatitis, alcoholic hepatitis, gastritis, enteritis, contact dermatitis, atopie dermatitis, gingivitis, appendicitis, pancreatitis, cholocystitis, and polycystic kidney disease.
In some embodiments, provided is a method of treating a subject having an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction by administering an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-ciystal thereof In some embodiments, the disease is selected from the group consisting of systemic lupus erythematosus, myestenia gravis, Goodpasture's syndrome, glomerulonephritis, hemorrhage, pulmonary hemorrhage, atherosclerosis, rheumatoid arthritis, psoriatic arthritis, monoarticular arthritis, osteoarthritis, gouty arthritis, spondylitis, Behçet disease, autoimmune thyroiditis, Reynaud’s syndrome, acute disseminated encephalomyelitis, chronic idiopathic thrombocytopénie purpura, multiple sclerosis, Sjôgren’s syndrome, autoimmune hemolytic anémia, tissue graft rejection, hyperacute rejection of transplanted organs, allograft rejection, graft-versus-host disease, diseases involving leukocyte diapedesis, disease States due to leukocyte dyscrasia and metastasis, granulocyte transfusion-associated syndromes, cytokine-induced toxicity, scleroderma, vasculitis, asthma, psoriasis, chronic inflammatory bowel disease, ulcerative colitis, Crohn’s disease, necrotizing enterocolitis, irritable bowel syndrome, dermatomyositis, Addison’s disease, Parkinson’s disease, Alzheimer’s disease, diabètes, type I diabètes mellitus, sepsis, septic shock, endotoxic shock, gram négative sepsis, gram positive sepsis, and toxic shock syndrome, multiple organ injury syndrome secondary to septicemia, trauma, hypovolémie shock, allergie conjunctivitis, vemal conjunctivitis, and thyroid-associated ophthalmopathy, éosinophilie granuloma, eczema, chronic bronchitis, acute respiratory distress syndrome, allergie rhinitis, coryza, hay fever, bronchial asthma, silicosis, pulmonary sarcoidosis, pleurisy, alveolitis, emphysema, pneumonia, bacterial pneumonia, bronchiectasis, and pulmonary oxygen toxicity, reperfusion injury of the myocardium, brain, or extremities, thermal injury, cystic fibrosis, keloid formation or scar tissue formation, fever and myalgias due to infection, and brain or spinal cord injury due to minor trauma, diseases involving leukocyte diapedesis, acute hypersensitivity, delayed hypersensitivity, urticaria, food allergies, skin sunbum, inflammatory pelvic disease, urethritis, uveitis, sinusitis, pneumonitis, encephalitis, meningitis, myocarditis, nephritis, osteomyelitis, myositis, hepatitis, alcoholic hepatitis, gastritis, enteritis, contact dermatitis, atopie dermatitis, gingivitis, appendicitis, pancreatitis, cholocystitis, and polycystic kidney disease.
In some embodiments, provided is a method of treating a subject having an autoimmune disease selected from the group consisting of a systemic lupus erythematosus, myestenia gravis, rheumatoid arthritis, acute disseminated encephalomyelitis, idiopathic thrombocytopénie purpura, multiple sclerosis, Sjoegren’s syndrome, psoriasis, autoimmune hemolytic anémia, asthma, ulcerative colitis, Crohn’s disease, irritable bowel disease, and chronic obstructive pulmonary disease by administering an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. In some embodiments, the autoimmune disease has excessive or destructive immune reactions, such as asthma, rheumatoid arthritis, multiple sclerosis, chronic obstructive pulmonary disease, or systemic lupus erythematosus.
In some embodiments, provided is a method of treating a subject having rheumatoid arthritis, by administering an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof.
Syk is a known inhibitor of apoptosis in lymphoma B-cells. Defective apoptosis contributes to the pathogenesis and drug résistance of human leukemias and lymphomas. Thus, further provided is a method of promoting or inducing apoptosis in cells expressing Syk comprising contacting the cell with a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof.
In some embodiments, provided is a method of treating a subject having cancer selected from the group consisting of carcinoma, sarcoma, melanoma, lymphoma and leukemia. In some embodiments the cancer is a solid tumor or a hématologie malignancy.
In some embodiments, provided is a method of treating a subject having a hématologie malignancy selected from the group consisting of small lymphocytic lymphoma, non-Hodgkin’s lymphoma, indolent non-Hodgkin’s lymphoma, refractory iNHL, mantle cell lymphoma, follicular lymphoma, lymphoplasmacytic lymphoma, marginal zone lymphoma, immunoblastic large cell lymphoma, lymphoblastic lymphoma, Splenic marginal zone B-cell lymphoma (+/- villous lymphocytes), Nodal marginal zone lymphoma (+/- monocytoid B-cells), Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue type, cutaneous T-cell lymphoma, extranodal T-cell lymphoma, anaplastic large cell lymphoma, angioimmunoblastic T-cell lymphoma, mycosis fungoides, B-cell lymphoma, diffuse large B-cell lymphoma, Médiastinal large B-cell lymphoma, Intravascular large B-cell lymphoma, Primary effusion lymphoma, small noncleaved cell lymphoma, Burkitt’s lymphoma, multiple myeloma, plasmacytoma, acute lymphocytic leukemia, T-cell acute lymphoblastic leukemia, B-cell acute lymphoblastic leukemia, B-cell prolymphocytic leukemia, acute myeloid leukemia, chronic lymphocytic leukemia, juvénile myelomonocytic leukemia, minimal residual disease, hairy cell leukemia, primary myelofibrosis, secondaiy myelofibrosis, chronic myeloid leukemia, myelodysplastic syndrome, myeloproliferative disease, and Waldestrom’s macroglobulinemia.
In some embodiments, provided is a method of treating a subject having cancer, wherein the cancer is leukemia or lymphoma, by administering an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. In some embodiments, the cancer is selected from the group consisting of acute lymphocytic leukemia, acute myeloid leukemia, chronic lymphocytic leukemia, small lymphocytic lymphoma, myelodysplastic syndrome, myeloproliferative disease, chronic myeloid leukemia, multiple myeloma, indolent non-Hodgkin’s lymphoma, refractory iNHL, nonHodgkin’s lymphoma, mantle cell lymphoma, follicular lymphoma, Waldestrom’s macroglobulinemia, T-cell lymphoma, B-cell lymphoma, and diffuse large B-cell lymphoma. In one embodiment, the cancer is T-cell acute lymphoblastic leukemia, or Bcell acute lymphoblastic leukemia. The non-Hodgkin lymphoma encompasses the indolent B-cell diseases that include, for example, follicular lymphoma, lymphoplasmacytic lymphoma, Waldenstrom macroglobulinemia, and marginal zone lymphoma, as well as the aggressive lymphomas that include, for example, Burkitt’s lymphoma, diffuse large B-cell lymphoma and mantle cell lymphoma. In one embodiment, the cancer is indolent nonHodgkin’s lymphoma.
In some embodiments, provided is a method of treating a subject having a hématologie malignancy by administering an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. In spécifie embodiments, the hématologie malignancy is leukemia (e.g., chronic lymphocytic leukemia) or lymphoma (e.g., non-Hodgkin’s lymphoma).
In some embodiments, provided is a method of treating a subject having chronic lymphocytic leukemia by administering an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof
In some embodiments, provided is a method of treating a subject having a solid tumor by administering an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. In some embodiments, the solid tumor is from a cancer selected from the group consisting of pancreatic cancer, urological cancer, bladder cancer, colorectal cancer, colon cancer, breast cancer, prostate cancer, rénal cancer, hepatocellular cancer, thyroid cancer, gall bladder cancer, lung cancer (e.g. nonsmall cell lung cancer, small-cell lung cancer), ovarian cancer, cervical cancer, gastric cancer, endométrial cancer, esophageal cancer, head and neck cancer, melanoma, neuroendocrine cancer, CNS cancer, brain tumors (e.g., glioma, anaplastic oligodendroglioma, adult glioblastoma multiforme, and adult anaplastic astrocytoma), bone cancer, soft tissue sarcoma, retinoblastomas, neuroblastomas, peritoneal effusions, malignant pleural effusions, mesotheliomas, Wilms tumors, trophoblastic neoplasms, hemangiopericytomas, Kaposi's sarcomas, myxoid carcinoma, round cell carcinoma, squamous cell carcinomas, esophageal squamous cell carcinomas, oral carcinomas, cancers of the adrenal cortex, and ACTH-producing tumors. In some embodiments, the solid tumor is from non-small cell lung cancer, small-cell lung cancer, colon cancer, CNS cancer, melanoma, ovarian cancer, rénal cancer, prostate cancer, and breast cancer.
Also provided herein is a compound as described herein, e.g. a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, for use in the treatment of a disease or condition as described herein, e.g. a cancer (including carcinoma, sarcoma, melanoma, lymphoma and leukemia), an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction. Also provided herein is a compound of formula I, or a pharmaceutically acceptable sait or co-crystal thereof, for use in a method of treatment described in this disclosure.
Also provided herein is a compound as described herein, e.g. a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, for use in the manufacture of a médicament for the treatment of a disease or condition as described herein, e.g. a cancer (including carcinoma, sarcoma, melanoma, lymphoma and leukemia), an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction.
Subjects
Any of the methods of treatment provided may be used to treat a subject who has been diagnosed with or is suspected of having an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction or a cancer.
In some of the embodiments of any of the methods provided herein, the subject is a human who is at risk of developing a cancer (e.g., a human who is genetically or otherwise predisposed to developing a cancer) and who has or has not been diagnosed with the cancer. As used herein, an “at risk” subject is asubject who is at risk of developing cancer (e.g., a hématologie malignancy). The subject may or may not hâve détectable disease, and may or may not hâve displayed détectable disease prior to the treatment methods described herein. An at risk subject may hâve one or more so-called risk factors, which are measurable parameters that correlate with development of cancer, such as described herein. A subject having one or more of these risk factors has a higher probability of developing cancer than an individual without these risk factor(s).
These risk factors may include, for example, âge, sex, race, diet, history of previous disease, presence of precursor disease, genetic (e.g., hereditary) considérations, and environmental exposure. In some embodiments, a subject at risk for cancer includes, for example, a subject whose relatives hâve experienced this disease, and those whose risk is determined by analysis of genetic or biochemical markers. Prior history of having cancer may also be a risk factor for instances of cancer récurrence.
Provided herein are also methods for treating a subject (e.g., ahuman) who exhibits one or more symptoms associated with cancer (e.g., a hématologie malignancy). In some embodiments, the subject is at an early stage of cancer. In other embodiments, the subject is at an advanced stage of cancer.
Provided herein are also methods for treating a subject (e.g., ahuman) who is undergoing one or more standard thérapies for treating cancer (e.g., a hématologie malignancy), such as chemotherapy, radiotherapy, immunotherapy, and/or surgery. Thus, in some foregoing embodiments, the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, administered before, during, or after administration of chemotherapy, radiotherapy, immunotherapy, and/or surgery.
In another aspect, provided herein are methods for treating a subject (e.g., a human) who is “refractory” to a cancer treatment or who is in “relapse” after treatment for cancer (e.g., a hématologie malignancy). A subject “refractory” to an anti-cancer therapy means they do not respond to the particular treatment, also referred to as résistant. The cancer may be résistant to treatment from the beginning of treatment, or may become résistant during the course of treatment, for example after the treatment has shown some effect on the cancer, but not enough to be considered a remission or partial remission. A subject in “relapse” means that the cancer has retumed or the signs and symptoms of cancer hâve retumed after a period of improvement, e.g. after a treatment has shown effective réduction in the cancer, such as after a subject is in remission or partial remission.
In some embodiments, the subject may be ahuman who is (i) refractory to at least one anti-cancer therapy, or (ii) in relapse after treatment with at least one anti-cancer therapy, or both (i) and (ii). In some of embodiments, the subject is refractory to at least two, at least three, or at least four anti-cancer thérapies (including, for example, standard or experimental chemotherapies).
In some embodiments, the subject is refractory to at least one, at least two, at least three, or at least four anti-cancer thérapies (including, for example, standard or experimental chemotherapy) selected from fludarabine, rituximab, obinutuzumab, alkylating agents, alemtuzumab and other chemotherapy treatments such as CHOP (cyclophosphamide, doxorubicin, vincristine, prednisone); R-CHOP (rituximab-CHOP); hyperCVAD (hyperfractionated cyclophosphamide, vincristine, doxorubicin, dexamethasone, methotrexate, cytarabine); R-hyperCVAD (rituximab-hyperCVAD); FCM (fludarabine, cyclophosphamide, mitoxantrone); R-FCM (rituximab, fludarabine, cyclophosphamide, mitoxantrone); bortezomib and rituximab; temsirolimus and rituximab; temsirolimus and Velcade®; Iodine-131 tositumomab (Bexxar®) and CHOP; CVP (cyclophosphamide, vincristine, prednisone); R-CVP (rituximab-CVP); ICE (iphosphamide, carboplatin, etoposide); R-ICE (rituximab-ICE); FCR (fludarabine, cyclophosphamide, rituximab); FR (fludarabine, rituximab); D.T. PACE (dexamethasone, thalidomide, cisplatin, Adriamycin®, cyclophosphamide, etoposide); and idelalisib.
Other examples of chemotherapy treatments (including standard or experimental chemotherapies) are described below. In addition, treatment of certain lymphomas is reviewed in Cheson, B.D., Leonard, J.P., “Monoclonal Antibody Therapy for B-Cell NonHodgkin’s Lymphoma” The New England Journal of Medicine 2008,359(6), p. 613-626; and Wierda, W.G., “Current and Investigational Thérapies for Patients with CLL” Hematology 2006, p. 285-294. Lymphoma incidence patterns in the United States is profiled in Morton, L.M., et al. “Lymphoma Incidence Patterns by WHO Subtype in the United States, 1992-2001” Blood 2006, 107(1), p. 265-276.
For example, treatment of non-Hodgkin’s lymphomas (NHL), especially of Bcell origin, include the use of monoclonal antibodies, standard chemotherapy approaches (e.g., CHOP, CVP, FCM, MCP, and the like), radioimmunotherapy, and combinations thereof, especially intégration of an antibody therapy with chemotherapy. Examples of unconjugated monoclonal antibodies for Non-Hodgkin’s lymphoma/B-cell cancers include rituximab, alemtuzumab, human or humanized anti-CD20 antibodies, lumiliximab, antiTRAIL, bevacizumab, galiximab, epratuzumab, SGN-40, and anti-CD74. Examples of experimental antibody agents used in treatment of Non-Hodgkin’s lymphoma/B-cell cancers include ofatumumab, ha20, PROl 31921, alemtuzumab, galiximab, SGN-40, CHIR-12.12, epratuzumab, lumiliximab, apolizumab, milatuzumab, and bevacizumab. Examples of standard regimens of chemotherapy for Non-Hodgkin’s lymphoma/B-cell cancers include CHOP (cyclophosphamide, doxorubicin, vincristine, prednisone), FCM (fludarabine, cyclophosphamide, mitoxantrone), CVP (cyclophosphamide, vincristine and prednisone), MCP (mitoxantrone, chlorambucil, and prednisolone), R-CHOP (rituximab plus CHOP), RFCM (rituximab plus FCM), R-CVP (rituximab plus CVP), and R-MCP (R-MCP). Examples of radioimmunotherapy for Non-Hodgkin’s lymphoma/B-cell cancers include yttrium-90-labeled ibritumomab tiuxetan, and iodine-131-labeled tositumomab.
In another example, therapeutic treatments for mantle cell lymphoma (MCL) include combination chemotherapies such as CHOP (cyclophosphamide, doxorubicin, vincristine, prednisone), hyperCVAD (hyperfractionated cyclophosphamide, vincristine, doxorubicin, dexamethasone, méthotrexate, cytarabine) and FCM (fludarabine, cyclophosphamide, mitoxantrone). In addition, these regimens can be supplemented with the monoclonal antibody rituximab (Rituxan) to form combination thérapies R-CHOP, hyperCVAD-R, and R-FCM. Other approaches include combining any of the abovementioned thérapies with stem cell transplantation or treatment with ICE (iphosphamide, carboplatin and etoposide). Other approaches to treating mantle cell lymphoma includes immunotherapy such as using monoclonal antibodies like Rituximab (Rituxan). Rituximab can be used for treating indolent B-cell cancers, including marginalzone lymphoma, WM, CLL and small lymphocytic lymphoma. A combination of Rituximab and chemotherapy agents is especially effective. A modified approach is radioimmunotherapy, wherein a monoclonal antibody is combined with a radioisotope particle, such as Iodine-131 tositumomab (Bexxar®) and Yttrium-90 ibritumomab tiuxetan (Zevalin®). In another example, Bexxar® is used in sequential treatment with CHOP.
Another immunotherapy example includes using cancer vaccines, which is based upon the genetic makeup of an individual subject’s tumor. A lymphoma vaccine example is GTOP99 (MyVax®). Yet other approaches to treating mantle cell lymphoma includes autologous stem cell transplantation coupled with high-dose chemotherapy, or treating mantle cell lymphoma includes administering protéasome inhibitors, such as Velcade® (bortezomib or PS-341), or antiangiogenesis agents, such as thalidomide, especially in combination with Rituxan. Another treatment approach is administering drugs that lead to the dégradation of Bcl-2 protein and increase cancer cell sensitivity to chemotherapy, such as oblimersen (Genasense) in combination with other chemotherapeutic agents. Another treatment approach includes administering mTOR inhibitors, which can lead to inhibition of cell growth and even cell death; a non-limiting example is Temsirolimus (CCI-779), and Temsirolimus in combination with Rituxan®, Velcade® or other chemotherapeutic agents.
Other recent thérapies for MCL hâve been disclosed {Nature Reviews, Jares, P. 2007). Such examples include Flavopiridol, PD0332991, R-roscovitine (Selicilib, CYC202), Styryl sulphones, Obatoclax (GX15-070), TRAIL, Anti-TRAIL DR4 and DR5 antibodies, Temsirolimus (CCI-779), Everolimus (RAD001), BMS-345541, Curcumin, Vorinostat (SAHA), Thalidomide, lenalidomide (Revlimid®, CC-5013), and Geldanamycin (17-AAG).
Examples of other therapeutic agents used to treat Waldenstrom’s Macroglobulinemia (WM) include perifosine, bortezomib (Velcade®), rituximab, sildenafil citrate (Viagra®), CC-5103, thalidomide, epratuzumab (hLL2- anti-CD22 humanized antibody), simvastatin, enzastaurin, campath-lH, dexamethasone, DT PACE, oblimersen, antineoplaston A10, antineoplaston AS2-1, alemtuzumab, beta alethine, cyclophosphamide, doxorubicin hydrochloride, prednisone, vincristine sulfate, fludarabine, filgrastim, melphalan, recombinant interferon alfa, carmustine, cisplatin, cyclophosphamide, cytarabine, etoposide, melphalan, dolastatin 10, indium In 111 monoclonal antibody MN14, yttrium Y 90 humanized epratuzumab, anti-thymocyte globulin, busulfan, cyclosporine, methotrexate, mycophenolate mofetil, therapeutic allogeneic lymphocytes, Yttrium Y 90 ibritumomab tiuxetan, sirolimus, tacrolimus, carboplatin, thiotepa, paclitaxel, aldesleukin, recombinant interferon alfa, docetaxel, ifosfamide, mesna, recombinant interleukin-12, recombinant interleukin-11, Bcl-2 family protein inhibitor ABT-263, denileukin diftitox, tanespimycin, everolimus, pegfilgrastim, vorinostat, alvocidib, recombinant flt3 ligand, recombinant human thrombopoietin, lymphokine-activated killer cells, amifostine trihydrate, aminocamptothecin, irinotecan hydrochloride, caspofungin acetate, clofarabine, epoetin alfa, nelarabine, pentostatin, sargramostim, vinorelbine ditartrate, WT-1 analog peptide vaccine, WT1 126-134 peptide vaccine, fenretinide, ixabepilone, oxaliplatin, monoclonal antibody CD19, monoclonal antibody CD20, omega-3 fatty acids, mitoxantrone hydrochloride, octreotide acetate, tositumomab and iodine 1-131 tositumomab, motexafin gadolinium, arsenic trioxide, tipifarnib, autologous human tumor-derived HSPPC-96, veltuzumab, bryostatin 1, and PEGylated liposomal doxorubicin hydrochloride, and any combination thereof.
Examples of therapeutic procedures used to treat WM include peripheral blood stem cell transplantation, autologous hematopoietic stem cell transplantation, autologous bone marrow transplantation, antibody therapy, biological therapy, enzyme inhibitor therapy, total body irradiation, infusion of stem cells, bone marrow ablation with stem cell support, in vitro-treated peripheral blood stem cell transplantation, umbilical cord blood transplantation, immunoenzyme technique, pharmacological study, low-LET cobalt-60 gamma ray therapy, bleomycin, conventional surgery, radiation therapy, and nonmyeloablative allogeneic hematopoietic stem cell transplantation.
Examples of other therapeutic agents used to treat diffuse large B-cell lymphoma (DLBCL) drug thérapies (Blood 2005 Abramson, J.) include cyclophosphamide, doxorubicin, vincristine, prednisone, anti-CD20 monoclonal antibodies, etoposide, bleomycin, many of the agents listed for Waldenstrom’s, and any combination thereof, such as ICE and R-ICE.
Examples of other therapeutic agents used to treat chronic lymphocytic leukemia (CLL) (Spectrum, 2006, Femandes, D.) include idelalisib (Zydelig®), Chlorambucil (Leukeran), Cyclophosphamide (Cyloxan, Endoxan, Endoxana, Cyclostin), Fludarabine (Fludara), Pentstatin (Nipent), Cladribine (Leustarin), Doxorubicin (Adriamycin®, Adriblastine), Vincristine (Oncovin), Prednisone, Prednisolone, Alemtuzumab (Campath, MabCampath), many of the agents listed for Waldenstrom’s, and combination chemotherapy and chemoimmunotherapy, including the common combination regimen: CVP (cyclophosphamide, vincristine, prednisone); R-CVP (rituximab-CVP); ICE (iphosphamide, carboplatin, etoposide); R-ICE (rituximab-ICE); FCR (fludarabine, cyclophosphamide, rituximab); and FR (fludarabine, rituximab).
In another aspect, provided is a method of sensitizing a subject (e.g., a human) who is (i) refractory to at least one chemotherapy treatment, or (ii) in relapse after treatment with chemotherapy, or both (i) and (ii), wherein the method comprises administering a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a pharmaceutical composition thereof, to the subject. A subject who is sensitized is a subject who is responsive to the treatment involving administration of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or who has not developed résistance to such treatment.
In another aspect, provided herein are methods for treating a subject (e.g., a human) for a cancer, with comorbidity, wherein the treatment is also effective in treating the comorbidity. A “comorbidity” to cancer is a disease that occurs at the same time as the cancer.
In some embodiments, provided herein are methods for treating a subject (e.g., a human) for chronic lymphocytic leukemia (CLL), with comorbidity, wherein the treatment is also effective in treating the comorbidity. Many subjects with CLL will hâve one or more other diseases, for example diseases affecting the blood pressure System, vascular and heart Systems, endocrine and metabolic Systems, genitourinary System, musculoskeletal System, respiratory System, neurological System, upper and lower gastrointestinal Systems, psychiatrie System, ear, nose and throat Systems, rénal System, or liver System. Spécifie morbidities of CLL include, but are not limited to, one or more other cancers (e.g. breast, head and neck, lung, melanoma, non-Hodgkin’s T-cell lymphoma, prostate, colon, small intestine, gynécologie and urinary tract), hypertension, hyperlipidemia, coronary arteiy disease, peripheral vascular diseases, cardiomyopathy, vulvular heart disease, atrial fibrillation, cerebrovascular disease (e.g. transient ischémie attack, stroke), chronic obstructive pulmonary disease, joint disease, peptic ulcer, inflammatory bowel disease, psychiatrie illness, thyroid disease, benign prostate hyperplasia, diabètes mellitus, and osteoarthritis (Satram-Hoang et al., Journalof Cancer Therapy, 2013; 4:1321-1329; Thurmes et al., Leukemia & Lymphoma, 2008; 49(1):49-56).
In some embodiments, a method of treating a comorbidity of CLL in a subject (e.g., a human), wherein the method comprises administering a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a pharmaceutical composition thereof, to the subject. In some embodiments, the comorbidity is selected from the group consisting of one or more other cancers (e.g. breast, head and neck, lung, melanoma, nonHodgkin’s T-cell lymphoma, prostate, colon, small intestine, gynécologie and urinary tract), hypertension, hyperlipidemia, coronary artery disease, peripheral vascular diseases, cardiomyopathy, vulvular heart disease, atrial fibrillation, cerebrovascular disease (e.g. transient ischémie attack, stroke), chronic obstructive pulmonary disease, joint disease, peptic ulcer, inflammatory bowel disease, psychiatrie illness, thyroid disease, benign prostate hyperplasia, diabètes mellitus, and osteoarthritis.
Monotherapy and Combination Thérapies
Also provided are methods of treatment in which a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, is the only active agent given to a subject and also includes methods of treatment in which a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, is given to a subject in combination with one or more additional active agents. Both monotherapy and combination thérapies are intended and described for use in the methods detailed herein, such as in a method of treating any of the diseases or conditions detailed herein and for use with any subject detailed herein.
Monotherapy
In some embodiments, a method of treating cancer, an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction comprises administering to a subject in need thereof an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, wherein the subject is not undergoing therapy for the same disease or condition with another agent or procedure.
In some embodiments where the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, is administered as a monotherapy to the subject who has been diagnosed with or is suspected of having a cancer, the subject may be a human who is (i) refractory to at least one anti-cancer therapy, or (ii) in relapse after treatment with at least one anti-cancer therapy, or both (i) and (ii). In some of embodiments, the subject is refractory to at least two, at least three, or at least four anti-cancer thérapies (including, for example, standard or experimental chemotherapies). For example, in some embodiments, the subject may be a human who is (i) refractory to a therapy using an anti-CD20 antibody, an alkylating agent (e.g., bendamustine), a purine analog (e.g., fludarabine), an anthracycline, or any combination thereof; (ii) in relapse after treatment with an anti-CD20 antibody, an alkylating agent (e.g., bendamustine), a purine analog (e.g., fludarabine), an anthracycline, or any combination thereof, or both (i) and (ii).
A human subject who is refractory to at least one anti-cancer therapy and/or is in relapse after treatment with at least one anti-cancer therapy, as described above, may hâve undergone one or more prior thérapies. In some embodiments, such subjects hâve undergone one, two, three, or four, or at least one, at least two, at least three, at least four, or at least five, or between one and ten, between one and nine, between one and eight, between one and seven, between one and six, between one and five, or between one and four, anticancer thérapies prior to treatment using the methods described herein (e.g., prior to the administration of the compound of Formula I, or a pharmaceutically acceptable sait or cocrystal thereof, as a monotherapy).
It should be understood that when a subject (e.g. a human) is treated with the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, as a monotherapy, the subject may also undergo one or more other thérapies that are not anticancer thérapies.
In some embodiments, a method of treating a comorbidity of a cancer, including but not limited to CLL, in a subject (e.g., a human) who has been diagnosed with cancer, e.g. CLL, wherein the method comprises administering a therapy to treat the comorbidity in combination with a compound of Formula I, or a pharmaceutically acceptable sait or cocrystal thereof, or a pharmaceutical composition thereof, to the subject. In some embodiments, the comorbidity is selected from the group consisting of one or more other cancers (e.g. breast, head and neck, lung, melanoma, non-Hodgkin’s T-cell lymphoma, prostate, colon, small intestine, gynécologie and urinary tract), hypertension, hyperlipidemia, coronary artery disease, peripheral vascular diseases, cardiomyopathy, vulvular heart disease, atrial fibrillation, cerebrovascular disease (e.g. transient ischémie attack, stroke), chronic obstructive pulmonary disease, joint disease, peptic ulcer, inflammatory bowel disease, psychiatrie illness, thyroid disease, benign prostate hyperplasia, diabètes mellitus, and osteoarthritis.
Combination thérapies
In some embodiments, a method of treating cancer, an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction comprises administering to a subject in need thereof an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, together with a second active agent, which can be useful for treating a cancer, an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction. For example the second agent may be an anti-inflammatory agent. Treatment with the second active agent may be prior to, concomitant with, or following treatment with a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. In some embodiments, a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof is combined with another active agent in a single dosage form. In one embodiment, the invention provides a product comprising a compound of the Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, and an additional therapeutic agent as a combined préparation for simultaneous, separate or sequential use in therapy, e.g. a method of treating a cancer, an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction.
Provided herein are also methods of treatment in which the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, administered to a subject (e.g., a human) who has been diagnosed with or is suspected of having a cancer is given to the subject in combination with one or more additional thérapies, including one or more of the anti-cancer thérapies described above. Thus, in some embodiments, the method for treating cancer in a subject (e.g·, a human) in need thereof, comprises administering to the subject a therapeutically effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a pharmaceutical composition thereof, together with one or more additional thérapies, which can be useful for treating the cancer. The one or more additional thérapies may involve the administration of one or more therapeutic agents. Suitable anti-cancer therapeutics that may be used in combination with a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof include, but are not limited to, one or more agents selected from the group consisting of chemotherapeutic agents (e.g. mitomycin C, carboplatin, taxol, cisplatin, paclitaxel, etoposide, doxorubicin), radiotherapeutic antitumor agents, topoisomerase I inhibitors (e.g.camptothesin or topotecan), topoisomerase Π inhibitors (e.g. daunomycin and etoposide), alkylating agents (e.g. cyclophosphamide, melphalan and BCNU), tubulin directed agents (e.g. taxol and vinblastine), PI3K inhibitors (e.g. compounds A, B, and C below), inhibitors of lysyl oxidase-like 2, and biological agents (e.g. antibodies such as anti CD20 antibody, IDEC 8, immunotoxins, and cytokines).
In some embodiments, the method for treating cancer in a subject (e.g., a human) in need thereof, comprises administering to the subject a therapeutically effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a pharmaceutical composition thereof with one or more additional thérapies selected from the group consisting of fludarabine, rituximab, obinutuzumab, alemtuzumab, cyclophosphamide, chlorambucil, doxorubicin, doxorubicin hydrochloride, vincristine, vincristine sulfate, melphalan, busulfan, carmustine, prednisone, prednisolone, dexamethasone, methotrexate, cytarabine, mitoxantrone, mitoxantrone hydrochloride, bortezomib, temsirolimus, carboplatin, etoposide, thalidomide, cisplatin, lumiliximab, antiTR ATT,, bevacizumab, galiximab, epratuzumab, SGN-40, anti-CD74, ofatumumab, ha20, PRO131921, CHIR-12.12, apolizumab, milatuzumab, bevacizumab, yttrium-90-labeled ibritumomab tiuxetan, tositumomab, iodine-131 tositumomab, iphosphamide, GTOP-99 vaccine, oblimersen, Flavopiridol, PD0332991, R-roscovitine, Styryl sulphones, Obatoclax, TR ΑΠ., Anti-TRAIL DR4 and DR5 antibodies, Everolimus, BMS-345541, Curcumin,
Vorinostat, lenalidomide, Geldanamycin, perifosine, sildenafil citrate, CC-5103, simvastatin, enzastaurin, campath-lH, DT PACE, antineoplaston A10, antineoplaston AS21, beta alethine, filgrastim, recombinant interferon alfa, dolastatin 10, indium In 111 monoclonal antibody MN-14, anti-thymocyte globulin, cyclosporine, mycophenolate mofetil, therapeutic allogeneic lymphocytes, tacrolimus, thiotepa, paclitaxel, aldesleukin, docetaxel, ifosfamide, mesna, recombinant interleukin-12, recombinant interleukin-11, ABT-263, denileukin diftitox, tanespimycin, everolimus, pegfilgrastim, vorinostat, alvocidib, recombinant flt3 ligand, recombinant human thrombopoietin, lymphokineactivated killer cells, amifostine trihydrate, aminocamptothecin, irinotecan hydrochloride, caspofungin acetate, clofarabine, epoetin alfa, nelarabine, pentostatin, sargramostim, vinorelbine ditartrate, WT-1 analog peptide vaccine, WT1 126-134 peptide vaccine, fenretinide, ixabepilone, oxaliplatin, monoclonal antibody CD 19, monoclonal antibody CD20, omega-3 fatty acids, octreotide acetate, motexafin gadolinium, arsenic trioxide, tipifarnib, autologous human tumor-derived HSPPC-96, veltuzumab, bryostatin 1, PEGylated liposomal hydrochloride, peripheral blood stem cell transplantation, autologous hematopoietic stem cell transplantation, autologous bone marrow transplantation, infusion of stem cells, bone marrow ablation with stem cell support, in vriro-treated peripheral blood stem cell transplantation, umbilical cord blood transplantation, low-LET cobalt-60 gamma ray therapy, bleomycin, conventional surgery, radiation therapy, and nonmyeloablative allogeneic hematopoietic stem cell transplantation.
In some embodiments, the one or more additional thérapies involve the use of a phosphatidylinositol 3-kinase (PI3K) inhibitor, including for example, Compounds A, B or C, or a pharmaceutically acceptable sait of such compounds. The structures of Compounds A, B and C are provided below.
Compound C
Compound A
Compound B
In other embodiments of the methods described above involving the use of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, in combination with one or more additional thérapies, the one or more additional thérapies is other than a therapy using Compound A, Compound B, or Compound C, or a pharmaceutically acceptable sait of such compounds. In one embodiment of the methods described above involving the use of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, in combination with one or more additional thérapies, the one or more additional thérapies is other than a therapy using Compound A, or a pharmaceutically acceptable sait or co-crystal thereof. In another embodiment of the methods described above involving the use of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, in combination with one or more additional thérapies, the one or more additional thérapies is other than a therapy using Compound B, or a pharmaceutically acceptable sait or co-crystal thereof. In yet another embodiment ofthe methods described above involving the use ofthe compound ofFormula I, or a pharmaceutically acceptable sait or co-crystal thereof, in combination with one or more additional thérapies, the one or more additional thérapies is other than a therapy using Compound C, or a pharmaceutically acceptable sait or co-crystal thereof.
In other embodiments, the one or more additional therapeutic agent may be an inhibitors of lysyl oxidase-like 2 (LOXL2) and a substance that bind to LOXL2, including for example, a humanized monoclonal antibody (mAb) with an immunoglobulin IgG4 isotype directed against human LOXL2.
The compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, can be useful as chemosensitizing agents, and, thus, can be useful in combination with other chemotherapeutic drugs, in particular, drugs that induce apoptosis.
A method for increasing sensitivity of cancer cells to chemotherapy, comprising administering to a subject (e.g., human) undergoing chemotherapy a chemotherapeutic agent together with a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a pharmaceutical composition thereof, in an amount sufficient to increase the sensitivity of cancer cells to the chemotherapeutic agent is also provided herein. Examples of other chemotherapeutic drugs that can be used in combination with Chemical entities described herein include topoisomerase I inhibitors (camptothesin or topotecan), topoisomerase Π inhibitors (e.g. daunomycin and etoposide), alkylating agents (e.g. cyclophosphamide, melphalan and BCNU), tubulin directed agents (e.g. taxol and vinblastine), and biological agents (e.g. antibodies such as anti CD20 antibody, IDEC 8, immunotoxins, and cytokines). In one embodiment of the method for increasing sensitivity of cancer cells to chemotherapy, the chemotherapeutic agent is other than Compound A, or a pharmaceutically acceptable sait or co-crystal thereof. In another embodiment of the method for increasing sensitivity of cancer cells to chemotherapy, the chemotherapeutic agent is other than Compound B, or a pharmaceutically acceptable sait or co-crystal thereof. In yet another embodiment of the method for increasing sensitivity of cancer cells to chemotherapy, the chemotherapeutic agent is other than Compound C, or a pharmaceutically acceptable sait or co-crystal thereof.
In some embodiments, the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a pharmaceutical composition thereof, is used in combination with Rituxan® (Rituximab) or other agents that work by selectively depleting CD20+ B-cells.
Included herein are methods of treating cancer, an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction comprising administering to a subject in need thereof an effective amount of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a pharmaceutical composition thereof, in combination with an anti-inflammatory agent. Anti-inflammatory agents include but are not limited to NSAIDs, non-specific and COX- 2 spécifie cyclooxgenase enzyme inhibitors, gold compounds, corticosteroids, methotrexate, tumor necrosis factor receptor (TNF) receptors antagonists, immunosuppressants and methotrexate. Examples of NSAIDs include, but are not limited to ibuprofen, flurbiprofen, naproxen and naproxen sodium, diclofenac, combinations of diclofenac sodium and misoprostol, sulindac, oxaprozin, diflunisal, piroxicam, indomethacin, etodolac, fenoprofen calcium, ketoprofen, sodium nabumetone, sulfasalazine, tolmetin sodium, and hydroxychloroquine. Examples of NSAIDs also include COX-2 spécifie inhibitors (i.e., a compound that inhibits COX-2 with an IC50 that is at least 50-fold lower than the IC50 for COX-1 ) such as celecoxib, valdecoxib, lumiracoxib, etoricoxib and/or rofecoxib.
In a further embodimenζ the anti-inflammatory agent is a salicylate. Salicylates include but are not limited to acetylsalicylic acid or aspirin, sodium salicylate, and choline and magnésium salicylates. The anti-inflammatory agent may also be a corticosteroid. For example, the corticosteroid may be chosen from cortisone, dexamethasone, méthylprednisolone, prednisolone, prednisolone sodium phosphate, and prednisone. In some embodiments, the anti-inflammatory therapeutic agent is a gold compound such as gold sodium thiomalate or auranofin. In some embodiments, the anti-inflammatory agent is a metabolic inhibitor such as a dihydrofolate reductase inhibitor, such as methotrexate or a dihydroorotate dehydrogenase inhibitor, such as leflunomide.
In some embodiments, combinations in which at least one anti-inflammatory compound is an anti-C5 monoclonal antibody (such as eculizumab or pexelizumab), a TNF antagonist, such as entanercept, or infliximab, which is an anti-TNF alpha monoclonal antibody are used.
In some embodiments, combinations in which at least one therapeutic agent is an immunosuppressant compound such as methotrexate, leflunomide, cyclosporine, tacrolimus, azathioprine, or mycophenolate mofetil are used.
Provided herein are also methods of treatment in which the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, administered to a subject (e.g., a human) who has been diagnosed with or is suspected of having an autoimmune disease is given to the subject in combination with one or more antiinflammatory or immunosuppresant agents selected from the group consisting of ibuprofen, flurbiprofen, naproxen, naproxen sodium, diclofenac, diclofenac sodium, misoprostol, sulindac, oxaprozin, diflunisal, piroxicam, indomethacin, etodolac, fenoprofen calcium, ketoprofen, sodium nabumetone, sulfasalazine, tolmetin sodium, hydroxychloroquine, celecoxib, valdecoxib, lumiracoxib, etoricoxib, rofecoxib, acetylsalicylic acid, sodium salicylate, choline salicylate, magnésium salicylate, cortisone, dexamethasone, méthylprednisolone, prednisolone, prednisolone sodium phosphate, prednisone, gold sodium thiomalate, auranofin, methotrexate, dihydroorotate leflunomide, leflunomide, cyclosporine, tacrolimus, azathioprine, mycophenolate mofetil, eculizumab, pexelizumab, entanercept, and infliximab.
It should be understood that any combinations of the additional therapeutic agents described above may be used, as if each and every combination was individually listed. For example, in some embodiments, the additional therapeutic agents include a PI3K inhibitor and a LOXL2 inhibitor.
Pharmaceutical Compositions and Administration
Compounds of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, are usually administered in the form of pharmaceutical compositions. This disclosure therefore provides pharmaceutical compositions that contain, as the active ingrédient, one or more of the compounds described, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal or pharmaceutically acceptable ester thereof, and one or more pharmaceutically acceptable vehicle, such as excipients, carriers, including inert solid diluents and Allers, diluents, including stérile aqueous solution and varions organic solvents, perméation enhancers, solubilizers and adjuvants. The pharmaceutical compositions may be administered alone or in combination with other therapeutic agents. Such compositions are prepared in a manner well known in the pharmaceutical art (see, e.g., Remington’s Pharmaceutical Sciences, Mace Publishing Co., Philadelphia, PA 17th Ed. (1985); and Modem Pharmaceutics, Marcel Dekker, Inc. 3rd Ed. (G.S. Banker & C.T. Rhodes, Eds.)
The pharmaceutical compositions may be administered in either single or multiple doses by any of the accepted modes of administration of agents having similar utilities, for example as described in those patents and patent applications incorporated by reference, including rectal, buccal, intranasal and transdermal routes, by intra-arterial injection, intravenously, intraperitoneally, parenterally, intramuscularly, subcutaneously, orally, topically, as an inhalant, or via an impregnated or coated device such as a stent, for example, or an artery-inserted cylindrical polymer.
One mode for administration is parentéral, particularly by injection. The forms in which the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, may be incorporated for administration by injection include aqueous or oil suspensions, or émulsions, with sesame oil, com oil, cottonseed oil, or peanut oil, as well as élixirs, mannitol, dextrose, or a stérile aqueous solution, and similar pharmaceutical vehicles. Aqueous solutions in saline may also conventionally be used for injection. Ethanol, glycerol, propylene glycol, liquid polyethylene glycol, and the like (and suitable mixtures thereof), cyclodextrin dérivatives, and vegetable oils may also be employed. The proper fluidity can be maintained, for example, by the use of a coating, such as lecithin, by the maintenance of the required particle size in the case of dispersion and by the use of surfactants. The prévention of the action of microorganisms can be brought about by various antibacterial and antifungal agents, for example, parabens, chlorobutanol, phénol, sorbic acid, thimerosal, and the like.
Stérile injectable solutions are prepared by incorporating a compound according to the présent disclosure in the required amount in the appropriate solvent with various other ingrédients as enumerated above, as required, followed by filtered sterilization. Generally, dispersions are prepared by incorporating the various sterilized active ingrédients into a stérile vehicle which contains the basic dispersion medium and the required other ingrédients from those enumerated above. In the case of stérile powders for the préparation of stérile injectable solutions, the preferred methods of préparation are vacuum-drying and freeze-drying techniques which yield a powder of the active ingrédient plus any additional desired ingrédient from a previously sterile-filtered solution thereof In some embodiments, for parentéral administration, stérile injectable solutions are prepared containing a therapeutically effective amount, e.g., 0.1 to 1000 mg, of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof. It will be understood, however, that the amount of the compound actually administered usuaiiy will be determined by a physician, in the light of the relevant circumstances, including the condition to be treated, the chosen route of administration, the actual compound administered and its relative activity, the âge, weight, and response of the individuai subject, the severity of the subject’s symptoms, and the like.
Oral administration is another route for administration of the compound of Formula L, or a pharmaceutically acceptable sait or co-crystal thereof. Administration may be via capsule or enteric coated tablets, or the like. In making the pharmaceutical compositions that include the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, the active ingrédient is usually diluted by an excipient and/or enclosed within such a carrier that can be in the form of a capsule, sachet, paper or other container. When the excipient serves as a diluent, it can be in the form of a solid, semi-solid, or liquid material (as above), which acts as a vehicle, carrier or medium for the active ingrédient. Thus, the compositions can be in the form of tablets, pills, powders, lozenges, sachets, cachets, élixirs, suspensions, émulsions, solutions, syrups, aérosols (as a solid or in a liquid medium), ointments containing, for example, up to 10% by weight of the active compound, soft and hard gelatin capsules, stérile injectable solutions, and stérile packaged powders.
Some examples of suitable excipients in an oral formulation include lactose, dextrose, sucrose, sorbitol, mannitol, starches, gum acacia, calcium phosphate, alginates, tragacanth, gelatin, calcium silicate, microcrystalline cellulose, polyvinylpyrrolidone, cellulose, stérile water, syrup, and methyl cellulose. The formulations can additionally include: lubricating agents such as talc, magnésium stéarate, and minerai oil; wetting agents; emulsifying and suspending agents; preserving agents such as methyl and propylhydroxybenzoates; sweetening agents; and flavoring agents.
The pharmaceutical compositions as described herein can be formulated so as to provide quick, sustained or delayed release of the active ingrédient after administration to the subject by employing procedures known in the art. Controlled release drug delivery Systems for oral administration include osmotic pump Systems and dissolutional Systems containing polymer-coated réservoirs or drug-polymer matrix formulations. Examples of controlled release Systems are given in U S. Patent Nos. 3,845,770; 4,326,525; 4,902,514; and 5,616,345. Another formulation for use in the methods of the présent disclosure employs transdermal deliveiy devices (patches). Such transdermal patches may be used to provide continuous or discontinuons infusion of the compounds of the présent disclosure in controlled amounts. The construction and use of transdermal patches for the delivery of pharmaceutical agents is well known in the art. See, e.g., U.S. Patent Nos. 5,023,252, 4,992,445 and 5,001,139. Such patches may be constructed for continuous, pulsatile, or on demand delivery of pharmaceutical agents.
In some embodiments, the compositions described herein are formulated in a unit dosage form. The term “unit dosage forms” refers to physically discrète units suitable as unitary dosages for human subjects and other mammals, each unit containing a predetermined quantity of active material calculated to produce the desired therapeutic effect, in association with a suitable pharmaceutical excipient (e.g., a tablet, capsule, ampoule). The compounds are generally administered in a pharmaceutically effective amount. In some embodiments, for oral administration, each dosage unit contains from about 1 mg to about 5000 mg, about 1 mg to about 4000 mg, about 1 mg to about 3000 mg, about 1 mg to about 2000 mg, about 2 mg to about 2000 mg, about 5 mg to about 2000 mg, about 10 mg to about 2000 mg, about 1 mg to about 1000 mg, about 2 mg to about 1000 mg, about 5 mg to about 1000 mg, about 10 mg to about 1000 mg, about 25 mg to about 1000 mg, about 50 mg to about 1000 mg, about 75 mg to about 1000 mg, about 100 mg to about 1000 mg, about 125 mg to about 1000 mg, about 150 mg to about 1000 mg, about 175 mg to about 1000 mg, about 200 mg to about 1000 mg, about 225 mg to about 1000 mg, about 250 mg to about 1000 mg, about 300 mg to about 1000 mg, about 350 mg to about 1000 mg, about 400 mg to about 1000 mg, about 450 mg to about 1000 mg, about 500 mg to about 1000 mg, about 550 mg to about 1000 mg, about 600 mg to about 1000 mg, about 650 mg to about 1000 mg, about 700 mg to about 1000 mg, about 750 mg to about 1000 mg, about 800 mg to about 1000 mg, about 850 mg to about 1000 mg, about 900 mg to about 1000 mg, about 950 mg to about 1000 mg, about 1 mg to about 750 mg, about 2 mg to about 750 mg, about 5 mg to about 750 mg, about 10 mg to about 750 mg, about 25 mg to about 750 mg, about 50 mg to about 750 mg, about 75 mg to about 750 mg, about 100 mg to about 750 mg, about 125 mg to about 750 mg, about 150 mg to about 750 mg, about 175 mg to about 750 mg, about 200 mg to about 750 mg, about 225 mg to about 750 mg, about 250 mg to about 750 mg, about 300 mg to about 750 mg, about 350 mg to about 750 mg, about 400 mg to about 750 mg, about 450 mg to about 750 mg, about 500 mg to about 750 mg, about 550 mg to about 750 mg, about 600 mg to about 750 mg, about 650 mg to about 750 mg, about 700 mg to about 750 mg, about 1 mg to about 500 mg, about 2 mg to about 500 mg, about 5 mg to about 500 mg, about 10 mg to about 500 mg, about 25 mg to about 500 mg, about 50 mg to about 500 mg, about 75 mg to about 500 mg, about 100 mg to about 500 mg, about 125 mg to about 500 mg, about 150 mg to about 500 mg, about 175 mg to about 500 mg, about 200 mg to about 500 mg, about 225 mg to about 500 mg, about 250 mg to about 500 mg, about 300 mg to about 500 mg, about 350 mg to about 500 mg, about 400 mg to about 500 mg, about 450 mg to about 500 mg, about 1 mg to about 400 mg, about 2 mg to about 400 mg, about 5 mg to about 400 mg, about 10 mg to about 400 mg, about 25 mg to about 400 mg, about 50 mg to about 400 mg, about 75 mg to about 400 mg, about 100 mg to about 400 mg, about 125 mg to about 400 mg, about 150 mg to about 400 mg, about 175 mg to about 400 mg, about 200 mg to about 400 mg, about 225 mg to about 400 mg, about 250 mg to about 400 mg, about 300 mg to about 400 mg, about 350 mg to about 400 mg, about 1 mg to about 300 mg, about 2 mg to about 300 mg, about 5 mg to about 300 mg, about 10 mg to about 300 mg, about 25 mg to about 300 mg, about 50 mg to about 300 mg, about 75 mg to about 300 mg, about 100 mg to about 300 mg, about 125 mg to about 300 mg, about 150 mg to about 300 mg, about 175 mg to about 300 mg, about 200 mg to about 300 mg, about 225 mg to about 300 mg, about 250 mg to about 300 mg, about 1 mg to about 250 mg, about 2 mg to about 250 mg, about 5 mg to about 250 mg, about 10 mg to about 250 mg, about 25 mg to about 250 mg, about 50 mg to about 250 mg, about 75 mg to about 250 mg, about 100 mg to about 250 mg, about 125 mg to about 250 mg, about 150 mg to about 250 mg, about 175 mg to about 250 mg, about 200 mg to about 250 mg, about 225 mg to about 250 mg, about 1 mg to about 225 mg, about 2 mg to about 225 mg, about 5 mg to about 225 mg, about 10 mg to about 225 mg, about 25 mg to about 225 mg, about 50 mg to about 225 mg, about 75 mg to about 225 mg, about 100 mg to about 225 mg, about 125 mg to about 225 mg, about 150 mg to about 225 mg, about 175 mg to about 225 mg, about 200 mg to about 225 mg, about 1 mg to about 200 mg, about 2 mg to about 200 mg, about 5 mg to about 200 mg, about 10 mg to about 200 mg, about 25 mg to about 200 mg, about 50 mg to about 200 mg, about 75 mg to about 200 mg, about 100 mg to about 200 mg, about 125 mg to about 200 mg, about 150 mg to about 200 mg, about 175 mg to about 200 mg, about 1 mg to about 175 mg, about 2 mg to about 175 mg, about 5 mg to about 175 mg, about 10 mg to about 175 mg, about 25 mg to about 175 mg, about 50 mg to about 175 mg, about 75 mg to about 175 mg, about 100 mg to about 175 mg, about 125 mg to about 175 mg, about 150 mg to about 175 mg, about 1 mg to about 150 mg, about 2 mg to about 150 mg, about 5 mg to about 150 mg, about 10 mg to about 150 mg, about 25 mg to about 150 mg, about 50 mg to about 150 mg, about 75 mg to about 150 mg, about 100 mg to about 150 mg, about 125 mg to about 150 mg, about 1 mg to about 125 mg, about 2 mg to about 125 mg, about 5 mg to about 125 mg, about 10 mg to about 125 mg, about 25 mg to about 125 mg, about 50 mg to about 125 mg, about 75 mg to about 125 mg, about 100 mg to about 125 mg, about 1 mg to about 100 mg, about 2 mg to about 100 mg, about 5 mg to about 100 mg, about 10 mg to about 100 mg, about 25 mg to about 100 mg, about 50 mg to about 100 mg, or about 75 mg to about 100 mg of a compound of Formula I, about or a pharmaceutically acceptable sait or co-crystal thereof
In some embodiments, for oral administration, each dosage unit contains about 1 mg, about 2 mg, about 5 mg, about 10 mg, about 15 mg, about 20 mg, about 25 mg, about 30 mg, about 35 mg, about 40 mg, about 45 mg, about 50 mg, about 75 mg, about 100 mg, about 125 mg, about 150 mg, about 175 mg, about 200 mg, about 225 mg, about 250 mg, about 300 mg, about 350 mg, about 400 mg, about 450 mg, about 500 mg, about 550 mg, about 600 mg, about 650 mg, about 700 mg, about 750 mg, about 800 mg, about 850 mg, about 900 mg, about 950 mg, or about 1000 mg of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof.
The dosages for oral administration described above may be administered once daily (QD) or twice daily (BID). In some embodiments, the compound of formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a pharmaceutical composition thereof, is administered orally at a unit dosage of about 1 mg QD, about 2 mg QD, about 5 mg QD, about 10 mg QD, about 15 mg QD, about 20 mg QD, about 25 mg QD, about 30 mg QD, about 35 mg QD, about 40 mg QD, about 45 mg QD, about 50 mg QD, about 75 mg QD, about 100 mg QD, about 125 mg QD, about 150 mg QD, about 175 mg QD, about 200 mg QD, about 225 mg QD, about 250 mg QD, about 300 mg QD, about 350 mg QD, about 400 mg QD, about 450 mg QD, about 500 mg QD, about 550 mg QD, about 600 mg QD, about 650 mg QD, about 700 mg QD, about 750 mg QD, about 800 mg QD, about 850 mg QD, about 900 mg QD, about 950 mg QD, or about 1000 mg QD. In some embodiments, the compound of formula I, or a pharmaceutically acceptable sait or cocrystal thereof, or a pharmaceutical composition thereof, is administered orally at a unit dosage of about 1 mg BID, about 2 mg BID, about 5 mg BID, about 10 mg BID, about 15 mg BID, about 20 mg BID, about 25 mg BID, about 30 mg BID, about 35 mg BID, about 40 mg BID, about 45 mg BID, about 50 mg BID, about 75 mg BID, about 100 mg BID, about 125 mg BID, about 150 mg BID, about 175 mg BID, about 200 mg BID, about 225 mg BID, about 250 mg BID, about 300 mg BID, about 350 mg BID, about 400 mg BID, about 450 mg BID, about 500 mg BID, about 550 mg BID, about 600 mg BID, about 650 mg BID, about 700 mg BID, about 750 mg BID, about 800 mg BID, about 850 mg BID, about 900 mg BID, about 950 mg BID, or about 1000 mg BID.
In some embodiments, for parentéral administration, each dosage unit contains from 0.1 mg to 1 g, 0.1 mg to 700 mg, or 0.1 mg to 100 mg of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof
For any of the dosage units as described herein, it will be understood, however, that the amount of the compound actually administered usually will be determined by a physician, in the light of the relevant circumstances, including the condition to be treated, the chosen route of administration, the actual compound administered and its relative activity, the âge, weight, and response of the individual subject, the severity of the subject’s symptoms, and the like.
For preparing solid compositions such as tablets, the principal active ingrédient is mixed with a pharmaceutical excipient to form a solid preformulation composition containing a homogeneous mixture of the compound of Formula I, or a pharmaceutically acceptable sait or co-ciystal thereof. When referring to these preformulation compositions as homogeneous, it is meant that the active ingrédient is dispersed evenly throughout the composition so that the composition may be readily subdivided into equally effective unit dosage forms such as tablets, pills and capsules.
The tablets or pills as described herein may be coated or otherwise compounded to provide a dosage form affording the advantage of prolonged action, or to protect from the acid conditions of the stomach. For example, the tablet or pill can comprise an inner dosage and an outer dosage component, the latter being in the form of an envelope over the former. The two components can be separated by an enteric layer that serves to resist disintegration in the stomach and permit the inner component to pass intact into the duodénum or to be delayed in release. A variety of materials can be used for such enteric layers or coatings, such materials including a number of polymeric acids and mixtures of polymeric acids with such materials as shellac, cetyl alcohol, and cellulose acetate.
Compositions for inhalation or insufflation may include solutions and suspensions in pharmaceutically acceptable, aqueous or organic solvents, or mixtures thereof, and powders. The liquid or solid compositions comprising the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, may contain suitable pharmaceutically acceptable excipients as described supra. Preferably, the compositions are administered by the oral or nasal respiratory route for local or systemic effect. Compositions in preferably pharmaceutically acceptable solvents may be nebulized by use of inert gases. Nebulized solutions may be inhaled directly from the nebulizing device or the nebulizing device may be attached to a facemask tent, or intermittent positive pressure breathing machine. Solution, suspension, or powder compositions may be administered, preferably orally or nasally, from devices that deliver the formulation in an appropriate manner.
Dosing Reginten
In the methods provided herein, the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, or a pharmaceutical composition thereof, is administered in a therapeutically effective amount to achieve its intended purpose. Détermination of a therapeutically effective amount is well within the capability of those skilled in the art, especially in light of the detailed disclosure provided herein. In some embodiments (methods of treating cancer), a therapeutically effective amount of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, may (i) reduce the number of cancer cells; (ii) reduce tumor size; (iii) inhibit, retard, slow to some extent, and preferably stop cancer cell infiltration into peripheral organs; (iv) inhibit (e.g., slow to some extent and preferably stop) tumor metastasis; (v) inhibit tumor growth; (vi) delay occurrence and/or récurrence of a tumor; and/or (vii) relieve to some extent one or more of the symptoms associated with the cancer. In various embodiments, the amount is sufficient to ameliorate, palliate, lessen, and/or delay one or more of symptoms of cancer.
The therapeutically effective amount may vary depending on the subject, and disease or condition being treated, the weight and âge of the subject, the severity of the disease or condition, and the manner of administering, which can readily be determined by one or ordinary skill in the art.
The dosing regimen of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, in the methods provided herein may vary depending upon the indication, route of administration, and severity ofthe condition, for example. Depending on the route of administration, a suitable dose can be caiculated according to body weight, body surface area, or organ size. The final dosing regimen is determined by the attending physician in viewof good medical practice, considering various factors that modify the action of drugs, e.g., the spécifie activity of the compound, the identity and severity of the disease State, the responsiveness of the subject, the âge, condition, body weight, sex, and diet of the subject, and the severity of any infection. Additional factors that can be taken into account include time and frequency of administration, drug combinations, reaction sensitivities, and tolerance/response to therapy. Further refinement ofthe doses appropriate for treatment involving any of the formulations mentioned herein is done routinely by the skilled practitioner without undue expérimentation, especially in light of the dosing information and assays disclosed, as well as the pharmacokinetic data observed in human clinical trials. Appropriate doses can be ascertained through use of established assays for determining concentration of the agent in a body fluid or other sample together with dose response data.
The formulation and route of administration chosen may be tailored to the individual subject, the nature of the condition to be treated in tire subject, and generally, the judgment of the attending practitioner. For example, the therapeutic index of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof may be enhanced 5 by modifying or derivatizing the compound for targeted delivery to cancer cells expressing a marker that identifies the cells as such. For example, the compounds can be linked to an antibody that recognizes a marker that is sélective or spécifie for cancer cells, so that the compounds are brought into the vicinity of the cells to exert their effects local ly, as previously described. See e.g., Pietersz et al., Immunol. Rev., 129:57 (1992); Trail et al., 10 Science, 261:212 (1993); and Rowlinson-Busza et al., Curr. Opin. Oncol., 4:1142 (1992).
The therapeutically effective amount of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, may be provided in a single dose or multiple doses to achieve the desired treatment endpoint. As used herein, “dose” refers to the total amount of an active ingrédient (e.g., the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof,) to be taken each time by a subject (e.g., a human). The dose administered, for example for oral administration described above, may be administered once daily (QD), twice daily (BID), three times daily, four times daily, or more than four times daily. In some embodiments, the dose of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, is administered once 20 daily. In some embodiments, the dose of a compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, is administered twice daily.
In some embodiments, exemplary doses of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, for a human subject may be from about 1 mg to about 5000 mg, about 1 mg to about 4000 mg, about 1 mg to about 3000 mg, 25 about 1 mg to about 2000 mg, about 2 mg to about 2000 mg, about 5 mg to about 2000 mg, about 10 mg to about 2000 mg, about 1 mg to about 1000 mg, about 2 mg to about 1000 mg, about 5 mg to about 1000 mg, about 10 mg to about 1000 mg, about 25 mg to about 1000 mg, about 50 mg to about 1000 mg, about 75 mg to about 1000 mg, about 100 mg to about 1000 mg, about 125 mg to about 1000 mg, about 150 mg to about 1000 mg, about 175 30 mg to about 1000 mg, about 200 mg to about 1000 mg, about 225 mg to about 1000 mg, about 250 mg to about 1000 mg, about 300 mg to about 1000 mg, about 350 mg to about 1000 mg, about 400 mg to about I000 mg, about 450 mg to about 1000 mg, about 500 mg to about 1000 mg, about 550 mg to about 1000 mg, about 600 mg to about 1000 mg, about 650 mg to about 1000 mg, about 700 mg to about 1000 mg, about 750 mg to about 1000 mg, about 800 mg to about 1000 mg, about 850 mg to about 1000 mg, about 900 mg to about 1000 mg, about 950 mg to about 1000 mg, about 1 mg to about 750 mg, about 2 mg to about 750 mg, about 5 mg to about 750 mg, about 10 mg to about 750 mg, about 25 mg to about 750 mg, about 50 mg to about 750 mg, about 75 mg to about 750 mg, about 100 mg to about 750 mg, about 125 mg to about 750 mg, about 150 mg to about 750 mg, about 175 mg to about 750 mg, about 200 mg to about 750 mg, about 225 mg to about 750 mg, about 250 mg to about 750 mg, about 300 mg to about 750 mg, about 350 mg to about 750 mg, about 400 mg to about 750 mg, about 450 mg to about 750 mg, about 500 mg to about 750 mg, about 550 mg to about 750 mg, about 600 mg to about 750 mg, about 650 mg to about 750 mg, about 700 mg to about 750 mg, about 1 mg to about 500 mg, about 2 mg to about 500 mg, about 5 mg to about 500 mg, about 10 mg to about 500 mg, about 25 mg to about 500 mg, about 50 mg to about 500 mg, about 75 mg to about 500 mg, about 100 mg to about 500 mg, about 125 mg to about 500 mg, about 150 mg to about 500 mg, about 175 mg to about 500 mg, about 200 mg to about 500 mg, about 225 mg to about 500 mg, about 250 mg to about 500 mg, about 300 mg to about 500 mg, about 350 mg to about 500 mg, about 400 mg to about 500 mg, about 450 mg to about 500 mg, about I mg to about 400 mg, about 2 mg to about 400 mg, about 5 mg to about 400 mg, about 10 mg to about 400 mg, about 25 mg to about 400 mg, about 50 mg to about 400 mg, about 75 mg to about 400 mg, about 100 mg to about 400 mg, about 125 mg to about 400 mg, about 150 mg to about 400 mg, about 175 mg to about 400 mg, about 200 mg to about 400 mg, about 225 mg to about 400 mg, about 250 mg to about 400 mg, about 300 mg to about 400 mg, about 350 mg to about 400 mg, about 1 mg to about 300 mg, about 2 mg to about 300 mg, about 5 mg to about 300 mg, about 10 mg to about 300 mg, about 25 mg to about 300 mg, about 50 mg to about 300 mg, about 75 mg to about 300 mg, about 100 mg to about 300 mg, about 125 mg to about 300 mg, about 150 mg to about 300 mg, about 175 mg to about 300 mg, about 200 mg to about 300 mg, about 225 mg to about 300 mg, about 250 mg to about 300 mg, about l mg to about 250 mg, about 2 mg to about 250 mg, about 5 mg to about 250 mg, about 10 mg to about 250 mg, about 25 mg to about 250 mg, about 50 mg to about 250 mg, about 75 mg to about 250 mg, about 100 mg to about 250 mg, about 125 mg to about 250 mg, about 150 mg to about 250 mg, about 175 mg to about 250 mg, about 200 mg to about 250 mg, about 225 mg to about 250 mg, about 1 mg to about 225 mg, about 2 mg to about 225 mg, about 5 mg to about 225 mg, about 10 mg to about 225 mg, about 25 mg to about 225 mg, about 50 mg to about 225 mg, about 75 mg to about 225 mg, about 100 mg to about 225 mg, about 125 mg to about 225 mg, about 150 mg to about 225 mg, about 175 mg to about 225 mg, about 200 mg to about 225 mg, about 1 mg to about 200 mg, about 2 mg to about 200 mg, about 5 mg to about 200 mg, about 10 mg to about 200 mg, about 25 mg to about 200 mg, about 50 mg to about 200 mg, about 75 mg to about 200 mg, about 100 mg to about 200 mg, about 125 mg to about 200 mg, about 150 mg to about 200 mg, about 175 mg to about 200 mg, about 1 mg to about 175 mg, about 2 mg to about 175 mg, about 5 mg to about 175 mg, about 10 mg to about 175 mg, about 25 mg to about 175 mg, about 50 mg to about 175 mg, about 75 mg to about 175 mg, about 100 mg to about 175 mg, about 125 mg to about 175 mg, about 150 mg to about 175 mg, about 1 mg to about 150 mg, about 2 mg to about 150 mg, about 5 mg to about 150 mg, about 10 mg to about 150 mg, about 25 mg to about 150 mg, about 50 mg to about 150 mg, about 75 mg to about 150 mg, about 100 mg to about 150 mg, about 125 mg to about 150 mg, about 1 mg to about 125 mg, about 2 mg to about 125 mg, about 5 mg to about 125 mg, about 10 mg to about 125 mg, about 25 mg to about 125 mg, about 50 mg to about 125 mg, about 75 mg to about 125 mg, about 100 mg to about 125 mg, about 1 mg to about 100 mg, about 2 mg to about 100 mg, about 5 mg to about 100 mg, about 10 mg to about 100 mg, about 25 mg to about 100 mg, about 50 mg to about 100 mg, or about 75 mg to about 100 mg.
In some embodiments, exemplary doses ofthe compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, for a human subject may be about 1 mg, about 2 mg, about 5 mg, about 10 mg, about 15 mg, about 20 mg, about 25 mg, about 30 mg, about 35 mg, about 40 mg, about 45 mg, about 50 mg, about 75 mg, about 100 mg, about 125 mg, about 150 mg, about 175 mg, about 200 mg, about 225 mg, about 250 mg, about 300 mg, about 350 mg, about 400 mg, about 450 mg, about 500 mg, about 550 mg, about 600 mg, about 650 mg, about 700 mg, about 750 mg, about 800 mg, about 850 mg, about 900 mg, about 950 mg, about 1000 mg, about 1200 mg, about 1400 mg, about 1600 mg, about 1800 mg, about 2000 mg, about 2200 mg, about 2400 mg, about 2600 mg, about 2800 mg, about 3000 mg, about 3200 mg, about 3400 mg, about 3600 mg, about 3800 mg, about 4000 mg, about 4200 mg, about 4400 mg, about 4600 mg, about 4800 mg, or about 5000 mg.
In other embodiments, the methods provided comprise continuing to treat the subject (e.g., a human) by administering the doses of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, at which clinical efficacy is achieved or reducing the doses by incréments to a level at which efficacy can be maintained. In some embodiments, the methods provided comprise administering to the subject (e.g., a human) an initial daily dose of 100 mg to 1000 mg of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, and administering subséquent daily doses of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, over at least 6 days, wherein each subséquent daily dose is increased by 50 mg to 400 mg. Thus, it should also be understood that the dose of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof may be increased by incréments until clinical efficacy is achieved. Incréments of about 25 mg, about 50 mg, about 100 mg, or about 125mg, or about 150 mg, or about 200 mg, or about 250 mg, or about 300 mg can be used to increase the dose. The dose can be increased daily, every other day, two, three, four, five or six rimes per week, or once per week.
The frequency of dosing will dépend on the pharmacokinetic parameters of the compound administered, the route of administration, and the particular disease treated. The dose and frequency of dosing may also dépend on pharmacokinetic and pharmacodynamie, as well as toxicity and therapeutic efficiency data. For example, pharmacokinetic and pharmacodynamie information about the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, can be collected through preclinical in vitro and in vivo studies, later confirmed in humans during the course of clinical trials. Thus, for the compound of Formula I, or a pharmaceutically acceptable sait or co-ciystal thereof, used in the methods provided herein, a therapeutically effective dose can be estimated initially from biochemical and/or cell-based assays. Then, dosage can be formulated in animal models to achieve a désirable circulating concentration range that modulâtes Syk expression or activity. As human studies are conducted further information will emerge regarding the appropriate dosage levels and duration of treatment for various diseases and conditions.
Toxicity and therapeutic efficacy of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, can be determined by standard pharmaceutical procedures in cell cultures or experimental animais, e.g., for determining the LD50 (the dose léthal to 50% of the population) and the ED50 (the dose therapeutically effective in 50% of the population). The dose ratio between toxic and therapeutic effects is the “therapeutic index”, which typically is expressed as the ratio LD50/ED50. Compounds that exhibit large therapeutic indices, i.e., the toxic dose is substantially higher than the effective dose, are preferred. The data obtained from such cell culture assays and additional animal studies can be used in formulating a range of dosage for human use. The doses of such compounds lies preferably within a range of circulating concentrations that include the ED50 with little or no toxicity.
The administration of the compound of Formula I, or a pharmaceutically acceptable sait or co-ciystal thereof, may be administered under fed conditions. The term fed conditions or variations thereof refers to the consumption or uptake of food, in either solid or liquid forms, or calories, in any suitable form, before or at the same time when the compounds or pharmaceutical compositions thereof are administered. For example, the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, may be administered to the subject (e.g., a human) within minutes or hours of consuming calories (e.g., a meal). In some embodiments, the compound of FormulaI, or a pharmaceutically acceptable sait or co-crystal thereof, may be administered to the subject (e.g., a human) within 5-10 minutes, about 30 minutes, or about 60 minutes consuming calories.
Articles of Manufacture and Kits
Compositions (including, for example, formulations and unit dosages) comprising the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, can be prepared and placed in an appropriate container, and labeled for treatment of an indicated condition. Accordingly, provided is also an article of manufacture, such as a container comprising a unit dosage form of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, and a label containing instructions for use of the compounds. In some embodiments, the article of manufacture is a container comprising a unit dosage form of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, and at least one pharmaceutically acceptable vehicle. The article of manufacture may be a bottle, vial, ampoule, single-use disposable applicator, or the like, containing the pharmaceutical composition provided in the présent disclosure. The container may be formed from a variety of materials, such as glass or plastic and in one aspect also contains a label on, or associated with, the container which indicates directions for use in the treatment of cancer or inflammatory conditions. It should be understood that the active ingrédient may be packaged in any material capable of improving Chemical and physical stability, such as an aluminum foil bag. In some embodiments, diseases or conditions indicated on the label can include, for example, treatment of cancer.
Any pharmaceutical composition provided in the présent disclosure may be used in the articles of manufacture, the same as if each and every composition were specifically and individually listed for use in an article of manufacture.
Kits comprising a pharmaceutical composition comprising a compound of Formula I, or a pharmaceutically acceptable sait or co-ciystal thereof, are also provided. For example, a kit can comprise unit dosage forms of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, and a package insert containing instructions for use of the composition in treatment of a medical condition. In some embodiments, the kit comprises a unit dosage form of the compound of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, and at least one pharmaceutically acceptable vehicle. The instructions for use in the kit may be for treating a cancer, including, for example, a hématologie malignancy. In some embodiments, the instructions are directed to use of the pharmaceutical composition for the treatment of cancer, such as leukemia or lymphoma, including relapsed and refractory leukemia or lymphoma. In some embodiments, the instructions for use in the kit may be for treating a hématologie cancer selected from the group consisting of small lymphocytic lymphoma, non-Hodgkin’s lymphoma, indolent non-Hodgkin’s lymphoma, refractory iNHL, mande cell lymphoma, follicular lymphoma, lymphoplasmacytic lymphoma, marginal zone lymphoma, immunoblastic large cell lymphoma, lymphoblastic lymphoma, Splenic marginal zone B-cell lymphoma (+/- villous lymphocytes), Nodal marginal zone lymphoma (+/monocytoid B-cells), Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue type, cutaneous T-cell lymphoma, extranodal T-cell lymphoma, anaplastic large cell lymphoma, angioimmunoblastic T-cell lymphoma, mycosis ftingoides, B-cell lymphoma, diffuse large B-cell lymphoma, Médiastinal large B-cell lymphoma, Intravascular large B-cell lymphoma, Primary effusion lymphoma, small non-cleaved cell lymphoma, Burkitt’s lymphoma, multiple myeloma, plasmacytoma, acute lymphocytic leukemia, T-cell acute lymphoblastic leukemia, B-cell acute lymphoblastic leukemia, B-cell prolymphocytic leukemia, acute myeloid leukemia, chronic lymphocytic leukemia, juvénile myelomonocytic leukemia, minimal residual disease, hairy cell leukemia, primary myelofibrosis, secondary myelofibrosis, chronic myeloid leukemia, myelodysplastic syndrome, myeloproliferative disease, and Waldestrom’s macroglobulinemia. In one embodiment, the instructions for use in the kit may be for treating chronic lymphocytic leukemia or non-Hodgkin’s lymphoma. In one embodiment, the NHL is diffuse large B-cell lymphoma, mande cell lymphoma, follicular lymphoma, small lymphocytic lymphoma, lymphoplasmacytic lymphoma, and marginal zone lymphoma. In one embodiment, the hématologie malignancy is indolent non-Hodgkin’s lymphoma. In some embodiments, diseases or conditions indicated on the label can include, for example, treatment of cancer.
In some instances, the instructions are directed to use of the pharmaceutical composition for the treatment of a solid tumor, wherein the solid tumor is from a cancer selected from the group consisting of pancreatic cancer, urological cancer, bladder cancer, colorectal cancer, colon cancer, breast cancer, prostate cancer, rénal cancer, hepatocellular cancer, thyroid cancer, gall bladder cancer, lung cancer (e.g. non-small cell lung cancer, small-cell lung cancer), ovarian cancer, cervical cancer, gastric cancer, endométrial cancer, esophageal cancer, head and neck cancer, melanoma, neuroendocrine cancer, CNS cancer, brain tumors (e.g., glioma, anaplastic oligodendroglioma, adult glioblastoma multiforme, and adult anaplastic astrocytoma), bone cancer, soft tissue sarcoma, retinoblastomas, neuroblastomas, peritoneal effusions, malignant pleural effusions, mesotheliomas, Wilms tumors, trophoblastic neoplasms, hemangiopericytomas, Kaposi's sarcomas, myxoid carcinoma, round cell carcinoma, squamous cell carcinomas, esophageal squamous cell carcinomas, oral carcinomas, cancers of the adrenal cortex, ACTH-producing tumors.
In some instances, the instructions are directed to use of the pharmaceutical composition for the treatment of an allergie disorder and/or an autoimmune and/or inflammatory disease, and/or an acute inflammatory reaction. In some embodiments, the instructions are directed to use of the pharmaceutical composition for the treatment of an autoimmune disease. in some embodiments, the instructions are directed to use of the pharmaceutical composition for the treatment of an autoimmune disease selected from the group consisting of systemic lupus erythematosus, myestenia gravis, rheumatoid arthritis, acute disseminated encephalomyelitis, idiopathic thrombocytopénie purpura, multiple sclerosis, Sjoegren’s syndrome, psoriasis, autoimmune hemolytic anémia, asthma, ulcerative colitis, Crohn’s disease, irritable bowel disease, and chronic obstructive pulmonary disease. In some embodiments, the autoimmune disease is selected from the group consisting of asthma, rheumatoid arthritis, multiple sclerosis, chronic obstructive pulmonary disease and systemic lupus erythematosus.
Any pharmaceutical composition provided in the présent disclosure may be used in the kits, the same as if each and every composition were specifically and individually listed for use a kit.
Synthesis
The compounds of the disclosure may be prepared using methods disclosed herein and routine modifications thereof which will be apparent given the disclosure herein and methods well known in the art. Conventional and well-known synthetic methods may be used in addition to the teachings herein. The synthesis of typical compounds of Formula I, or a pharmaceutically acceptable sait or co-crystal thereof, may be accomplished as described in the foliowing examples. If available, reagents may be purchased commercially, e.g. from Sigma Aldrich or other Chemical suppliers.
General Synthèses
Typical embodiments of compounds in accordance with the présent disclosure may be synthesized using the general reaction schemes described below. It will be apparent given the description herein that the general schemes may be altered by substitution of the starting materials with other materials having similar structures to resuit in products that are correspondingly different. Descriptions of synthèses follow to provide numerous examples of how the starting materials may vary to provide corresponding products. Given a desired product for which the substituent groups are defined, the necessary starting materials generally may be determined by inspection. Starting materials are typically obtained from commercial sources or synthesized using published methods. For synthesizing compounds which are embodiments of the présent disclosure, inspection of the structure of the compound to be synthesized will provide the identity of each substituent group. The identity of the final product will generally render apparent the identity of the necessary starting materials by a simple process of inspection, given the examples herein.
Synthetic Reaction Parameters
The compounds of this disclosure can be prepared from readily available starting materials using, for example, the following general methods and procedures. It will be appreciated that where typical or preferred process conditions (i.e., reaction températures, times, mole ratios of reactants, solvents, pressures, etc.) are given, other process conditions can also be used unless otherwise stated. Optimum reaction conditions may vary with the particular reactants or solvent used, but such conditions can be determined by one skilled in the art by routine optimization procedures.
Additionally, as will be apparent to those skilled in the art, conventional protecting groups may be necessary to prevent certain fiinctional groups from undergoing undesired reactions. Suitable protecting groups for various fiinctional groups as well as suitable conditions for protecting and deprotecting particular fiinctional groups are well known in the art. For example, numerous protecting groups are described in T. W. Greene and G. M. Wuts (l 999) Protecting Groups in Organic Synthesis, 3rd Edition, Wiley, New York, and référencés cited therein.
Furthermore, the compounds of this disclosure may contain a chiral center. Accordingly, if desired, such compounds can be prepared or isolated as pure stereoisomers, i.e., as individual enantiomers or as stereoisomer-enriched mixtures. Ail such stereoisomers (and enriched mixtures) are included within the scope of this disclosure, unless otherwise indicated. Pure stereoisomers (or enriched mixtures) may be prepared using, for example, optically active starting materials or stereoselective reagents well-known in the art. Altematively, racemic mixtures of such compounds can be separated using, for example, chiral column chromatography, chiral resolving agents, and the like.
The starting materials for the following reactions are generally known compounds or can be prepared by known procedures or obvious modifications thereof. For example, many of the starting materials are available from commercial suppliers such as Aldrich Chemical Co. (Milwaukee, Wisconsin, USA). Others may be prepared by procedures or obvious modifications thereof described in standard reference texts such as Fieser and Fieser's Reagents for Organic Synthesis, Volumes 1 -15 (John Wiley, and Sons, 1991), Rodd's Chemistry of Carbon Compounds, Volumes 1-5, and Supplémentais (Elsevier Science Publishers, 1989) organic Reactions, Volumes 1-40 (John Wiley, and Sons, 1991), March's Advanced Organic Chemistry, (John Wiley, and Sons, 501 Edition, 2001), and Larock's Comprehensive Organic Transformations (VCH Publishers Inc., 1989).
The terms “solvent,” “inert organic solvent” or “inert solvent” refer to a solvent inert under the conditions of the reaction being described in conjunction therewith (including, for example, benzene, toluene, acetonitrile, tetrahydrofuran (“THF”), dimethylformamide (“DMF”), chloroform, methylene chloride (or dichloromethane), diethyl ether, methanol, pyridine and the like). Unless specified to the contrary, the solvents used in the reactions of the présent disclosure are inert organic solvents, and dre reactions are carried out under an inert gas, preferably nitrogen.
The term “q.s.” means adding a quantity sufficient to achieve a stated function, e.g., to bring a solution to the desired volume (i.e., 100%).
The following examples are included to demonstrate preferred embodiments of the disclosure. It should be appreciated by those of skill in the art that the techniques disclosed in the examples which follow represent techniques discovered by the inventor to function well in the practice of the disclosure, and thus can be considered to constitute preferred modes for its practice. However, those of skill in the art should, in light of the présent disclosure, appreciate that many changes can be made in the spécifie embodiments which are disclosed and still obtain a like or similar resuit without departing from the spirit and scope of the disclosure.
List of abbreviations and acronyms.
Abbreviation | Meaning |
°C | Degree Celsius |
anal | Analytical |
ATP | Adenosine-5'-triphosphate |
ΑΤΧΠ | Anemonia sulcata toxin |
AcOH | Acetic acid |
ACN | Acetonitrile |
CAN | Ceric ammonium nitrate |
CDI | 1,1 ’-carbonyldiimidazole |
CHO | Chinese hamster ovaiy |
conc. | Concentrated |
d | Doublet |
DABCO | 1,4-Diazabicyclo[2.2.2]octane |
DAST | (Diethylamino)sulfur trifluoride |
dd | Doublet of doublets |
DCE | 1,2-dichloroethane |
DCM | Dichloromethane |
DEAD | Diethyl azodicarboxylate |
DIPEA | N,N-diisopropylethylamine |
DMAP | 4-dimethylaminopyridine |
DME | 1,2-dimethoxyethane |
DMF | Dimethylformamide |
DMSO | Dimethylsulfoxide |
dppf | 1,1 '-Bis(diphenylphosphino)ferrocene |
Abbreviation | Meaning |
EA | Ethyl alcohol |
ECF | Extracellular fluid |
EDTA | Ethylenediaminetetraacetic acid |
EGTA | Ethylene glycol tetraacetic acid |
equiv/eq ESI | Equivalents Electrospray ionization |
Ac | Acetate |
Et | Ethyl |
EtOAc | Ethyl Acetate |
g HEPES | Grams (4-(2-Hydroxyethyl)-l-piperazineethanesulfonic acid ) |
HATU | 2-(7-Aza-l H-Benzotriazole -l -yl )-1, l >3,3 tetramethyluronium hexafluorophosphate |
hERG | human Ether-à-go-go Related Gene |
HMDS | hexamethyldisilazane(azide) |
HPLC | High-performance liquid chromatography |
h | Hours |
Hz | Hertz |
EPA | Isopropyl alcohol |
IC 50 | The half maximal inhibitory concentration |
IMR-32 | Human neuroblastoma cell line |
J | Coupling constant |
Kg kHz | Kilogram Kilohertz |
LAH | Lithium ammonium hydride |
LCMS/LC-MS | Liquid chromatography-mass spectrometry |
M | Molar |
m | multiplet |
m/z | mass-to-charge ratio |
M+ | Mass peak |
M+H | Mass peak plus hydrogen |
Abbreviation | Meaning |
mCPBA | 3-chloroperoxybenzoic acid |
Me | Methyl |
MeOH | Methanol |
mg MHz | Milligram Mégahertz |
min/m | Minute |
ml/mL | Milliliter |
mM | Millimolar |
mmol | Millimole |
nmol | Nanomole |
mOsmol | Milliosmole |
MRM | Magnetic Résonance Microscopy |
MS | Mass spectre scopy |
ms | Millisecond |
mV | Millivolt |
mw | Microwave |
N | Normal |
mol | Mole |
NMP | Ύ-methylpyrrolidinone |
NMR | Nuclear magnetic résonance |
pA | Picoamps |
Ph | Phenyl |
ppm | Parts per million |
prep | Préparative |
q.s. Rf | Quantity sufficient to achieve a stated function Rétention factor |
RP | Reverse phase |
RT/rt | Room température |
S | Second |
s | Singlet |
Abbreviation | Meaning |
SEM | 2-(Trimethylsilyl)ethoxymethyl |
t | Triplet |
TB | Tonie Block |
TEA | Triethylamine |
TFA | Trifluoroacetic acid |
THF | Tetrahydrofuran |
TLC | Thin layer chromatography |
TMS | trimethylsilyl |
TTX | Tetrodotoxin |
UDB | Use Dépendent Block |
WT | Wild type |
δ | Chemical shift |
Microgram | |
pL/ μΐ | Microliter |
μΜ | Micromolar |
pm | Micrometer |
μmol | Micromole |
EXAMPLES
Préparation of Common Inter médiates
Intermediate 1.01. Préparation of tert-Butyl (6-broinoimidazo[l,2-a]pyiazin-8-yl)(4(4-(oxetan-3-yl)piperazin-l-yl)phenyl)carbamate IV and tert-butyl 4-(4-(oxetan-35 yl)piperazin-l-yl)phenyl(6-(tributylstannyl)imidazo|l,2-a]pyrazin-8-yl)carbamate V
DMF, K2CO3
SnBu3, TBAI, dioxane, Pd (PPh3)4
100°C overnight p-tube
l-(4-Nitrophenyl)-4-(oxetan-3-yl)piperazîne I: In a 500 mL round bottom flask, l-(oxetan-3-yl)piperazine (3.02 g, 21.26 mmoles), potassium carbonate (5.87 g, 42.52 mmoles), 1 -fluoroZ-nitrobenzene (3.00 g, 21.26 mmoles) was combined in acetonitrile (33 mL) and stirred under nitrogen overnight at 100 °C. The mixture was diluted with water (100 mL) and extracted with DCM (100 mL x 3), dried over anhydrous sodium carbonate, filtered and the filtrate was concentrated. The residue was dissolved in minimal DCM using a sonicator and crashed out with hexane. The precipitate was filtered, washed with hexane and dried to provide the title compound I.
4-(4-(Oxetan-3-yl)piperazin-l-yl)aniline II: In a hydrogénation vessel, l-(4nitrophenyl)-4-(oxetan-3-yl)piperazine I (4.70 g, 17.85 mmoles) was dissolved as much as possible in MeOH (26 mL) and DCM (5 mL). Pd/C (10%) (2.85 g, 2.68 mmoles) was added and the reaction was stored under nitrogen. The reaction was shaken on the Parr hydrogenator at 45 PSI. After 15 minutes, the reaction was fiilly recharged to 45 PSI and shaken for an additional hour. The material was filtered over celite, washed with 25% MeOH/DCM and concentrated to provide the title compound Π.
6-Bromo-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyiazin8-amine III: To 4-(4-(oxetan-3-yl)piperazin-l-yl)aniline Π (2.00 g, 8.57 mmoles), hunig’s base (3.29 mL) and 6,8-dibromoimidazo[l,2-a]pyrazine (2.37 g, 8.57 mmoles) was added in DMF (43 mL). The reaction was stirred at 85 °C in a pressure tube for ovemight. The material was quenched with saturated sodium bicarbonate, extracted with DCM (120 mL x 3) and the organic layers were combined and washed with water (l 20 mL x 3), dried over anhydrous sodium carbonate and concentrated. The crude material was purified using a 120 g Isco column and eluted off using a stepwise gradient of 0-60% (10% MeOH/DCM). The desired fractions were combined and concentrated to provide the title compound ΙΠ.
tert-Butyl (6-bromoimidazo[l,2-a]pyrazin-8-yl)(4-(4-(oxetan-3-yl)piperazinl-yl)phenyl)carbamate IV: 6-bromo-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine IH (1000 mg, 2.33 mmol), di-tert-butyl dicarbonate (1016.72 mg, 4.66 mmol) and N,N-dimethylpyridin-4-amine (21.34 mg, 0.17 mmol) were stirred in DCM (1.01 ml) and refluxed at 65 °C for 3h. The reaction was diluted with 100 mL of DCM, washed with H2O (x3), dried, filtered and concentrated. The crude material was dissolved in minimal DCM, loaded onto a preloaded silica loader and eluted off a 40 g column using 0-30% MeOH/DCM over 20 column volumes. The desired fractions were combined and concentrated to provide the title compound. This compound is used in Example 2.
tert-Butyl 4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl(6(tributylstannyl)imidazo[l,2-a|pyrazin-8-yl)carbamate V: In a 350 mL p-tube, tert-butyl 6-bromoimidazo[l,2-a]pyrazin-8-yl(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)carbamate IV (8150 mg, 15.39 mmol), 1,1,1,2,2,2-hexabutyldistannane (11.67 ml, 23.09 mmol), tetrakis(triphenylphosphine)palladium (889.43 mg, 0.77 mmol), and tetrabutylammonium iodide (5686.03 mg, 15.39 mmol) were combined in dioxane (62 ml) and heated to 110 °C ovemight. According to LCMS, no starting material remained. The reaction was absorbed onto celite and eluted off a 160 g alumina column using a 0-10-20-30-100% (50% EtOAc/Hex-Hex) gradient holding at 50% for 10-15 column volumes over 50-60 column volumes to provide the title compound V. This compound is used in Examples 1 and 2.
Intermediate 1.02. Préparation tert-butyl (6-bromo-5-methylimidazo[l,2a]pyrazin-8-yl)(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)carbamate X
ZnCI2> N N 3M CH3MgBr in Et2O rf [l i ► A A CI^N^NHj Ni(dppp)CI2 H3C N NH2 THF VI o- ch3 Br 1. N'î^'x^Nv. HBr, 1 h 2. éthanol I 3. K2CO3, H2O 7111 °a BOC2O, TEA, T fl DMAP, DCM 65°C, 1h .X 7¼ | NBS Br\/N Br ---* I A THF Η3θ^Ν^ΝΗ2 VII 11 DIEA, IPA 85°C p-tube °A L, JL, Boc N' mA-N x r \ Br γ |
6-Methylpyrazin-2-amine VI: To a solution of anhydrous zinc(II) chloride (26.3 g, 193 mmol) in THF (150 mL) at 0 °C, was added 3M methyl magnésium bromide in diethyl ether (129 mL) drop wise over a period of 1 h. [l,3-bis(diphenylphosphino)propane] nickel(II) chloride (2.08 g, 3.85 mmol) was then added and the mixture allowed to warm to room température. To the above mixture, a solution of 6-chloro-2-aminopyrazine (5.00 g, 38.6 mmol) in anhydrous THF (25 mL) was added and the reaction stirred, under a nitrogen atmosphère, at reflux for 6 h. After this time, the mixture was cooled to room température, then to 0 °C and carefiilly quenched with saturated aqueous ammonium chloride (50 mL). The organic layer was separated and dried over sodium sulfate. The drying agent was filtered and the filtrate concentrated under reduced pressure to provide crude 6methylpyrazin-2-amine VL, which was used in the next step without purification: Tl NMR (400 MHz, CDCh) δ: 7.63 (s, IH), 7.53 (s, IH), 4.96 (bs, 2H), 2.16 (s, 3H).
3,5-Dibromo-6-methylpyrazin-2-amine VII: To a solution of 6methylpyrazin-2-amine VI (2.00 g, 18.3 mmol) in THF (40 mL) at 10 °C, was added Nbromosuccinimide (6.70 g, 37.6 mmol) portion wise over 15 min and the mixture allowed to warm to room température while stining. After 2 h, the reaction was concentrated under reduced pressure and the resulting residue was purified by column chromatography (silica, gradient, hexanes to EtOAc) to provide 3,5-dibromo-6-methylpyrazin-2-amine VII: ’H NMR (400 MHz, CDCh) δ: 4.93 (bs, 2H), 2.38 (s, 3H).
6^-Dibromo-5-methylimidazo|l^-fl]pyrazine VIII: A mixture of 2-bromo1,1-diethoxyethane (3.21 mL, 20.7 mmol) and 48% aqueous hydrobromic acid (1.0 mL) was stirred at reflux for 2 h. The reaction was then cooled to room température and treated with sodium bicarbonate until gas évolution ceased. The mixture was filtered and the filtrate diluted with éthanol (15 mL). To this mixture, 3,5-dibromo-6-methylpyrazin-2-amine VU (3.00 g, 11.2 mmol) was added and the reaction stirred at reflux for 16 h. After this time, the reaction was cooled to room température and concentrated under reduced pressure to a volume of approximately 10 mL. The suspension was filtered and the filter cake washed with cold éthanol (5 mL). The filter cake was then taken into water (50 mL) and the pH was adjusted to ~ 8 with potassium carbonate. The resulting suspension was filtered and the filter cake dried to a constant weight under vacuum to provide 6,8-dibromo-599 methylimidazo[l,2-a]pyrazine VIII: ‘H NMR (400 MHz, CDCl3) δ: 7.90 (s, lH), 7.72 (s, 1H), 2.74 (s, 3 H).
6-Bromo-5-methyl-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2a]pyrazin-8-amine IX: The compound IX was prepared from 6,8-dibromo-55 methylimidazo[l ,2-a]pyrazine Vin using the method as described for preparing 6-bromo-N(4-(4-(oxetan-3-yl)piperazin-I-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine ΙΠ in Intermediate Example 1.01.
tert-Butyl (6-bromo-5-methylimidazo| 1,2-a| pyrazîn-8-yl)(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)carbamate X: The compound X was prepared from 6-bromo-510 methyl-N-(4-(4-(oxetan-3-yl)piperazin-l -yl)phenyl)imidazo[l ,2-a]pyrazin-8-amine IX using the method as described for preparing tert-butyl (6-bromoimidazo[I,2-a]pyrazin-8-yl)(4-(4(oxetan-3-yl)piperazin-l-yl)phenyl)carbamate IV in Intermediate Example 1.01. This compound is used in Example 4.
100
Synthesis of Examples 1-7
Example 1 Préparation of 6-(6-amino-5-methylpyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazn-l-yl)phenyl)imidazo[l,2-a|pyrazin-8-amine (1)
2-Bis(tert-butoxycarbonyl)amino-6-bromo-3-chloropyrazine XI: 6-Bromo3-chloropyrazin-2-amine (2000 mg, 9.59 mmol) was dissolved in DCM (48 ml) followed by triethylamine (3.99 ml, 28.78 mmol), di-tert-butyl dicarbonate (4188.12 mg, 19.19 mmol), and N,N-dimethylpyridin-4-amine (87.91 mg, 0.72 mmol). The reaction was allowed to stir at room température for ovemight. The crude material was washed with water, dried, filtered and concentrated. The crude material was dissolved in minimal DCM and loaded onto a 25 g prepacked silica loader and eluted off a 40 g column using 0-30% MeOH/DCM. The title compound XI was isolated and identified by LCMS and NMR. The product was a mix of mono and bis boc-protected material, mainly bis boc-protected as observed by NMR.
101 tert-Butyl tert-butoxycarbonyl(6-(8-((tert-butoxycarbonyl)(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)amino)imidazo[l,2-a]pyrazin-6-yl)-3-chloropyrazin-2yl)carbamate XII: tert-Butyl 4-(4-(Oxetan-3-yl)piperazin-l-yl)phenyl(6(tributylstannyl)imidazo[l,2-a]pyrazin-8-yl)carbamate V (1000 mg, 1.4 mmol), 2-Bis(tertbutoxycarbonyl)amino-6-bromo-3-chloropyrazine XI (552 mg, 1.35 mmol), and PdC12(PPhs)2 (142.77 mg, 0.20 mmol), in 1,4-Dioxane (11.27 ml) was irridated in the microwave for 20 min at 140 °C. The reaction was absorbed onto celite and eluted off a 40 g Gold Isco column using 0-10-100% (30% MeOH/DCM) over 20 column volumes. Fractions 34-39 were collected and concentrated. According to NMR, the title compound ΧΠ was identified and isolated.
tert-Butyl (6-(6-amino-5-methylpyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)(4(4-(oxetan-3-yl)piperazin-l-yl)phenyl)carbamate XIII: In a microwave vial, tert-butyl tert-butoxycarbonyl(6-(8-((tert-butoxycarbonyl)(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)amino)imidazo[l,2-a]pyrazin-6-yl)-3-chloropyrazin-2-yl)carbamate ΧΠ (300 mg, 0.44 mmol), methylboronic acid (794.39 mg, 13.27 mmol), tetrakis(triphenylphosphine)palladium (51.12 mg, 0.04 mmol), and 2M Na2CÛ3 (0.44 ml) were combined in DME (1.77 ml) and irridated in the microwave for 20 min at 150 °C. The reaction was worked up using 25% MeOH/DCM and water. The organic layers were combined, dried, filtered and concentrated. The crude material was loaded onto silica and eluted off a 40 g Gold column using 0-5-15-25-50 % (30%MeOH/DCM) over 45 column volumes. The desired fractions were concentrated and provided tert-butyl (6-(6-amino-5methylpyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)carbamate ΧΙΠ as the minor product and the desired final compound 1 as an inséparable mixture (208mg total) and were taken in to the TFA reaction.
6-(6-Amino-5-methylpyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazm-8-amine (1): To a solution of tert-butyl 6-(6-amino-5- , methylpyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)carbamate ΧΠΙ (48 mg, 0.09 mmol) and 6-(6-amino-5-methylpyrazin-2-yl)-N-(4(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine (1, 160 mg, 0.35 mmol) in DCM (2.5 ml) was added TFA (0.16 ml, 2.15 mmol). Additional TFA (0.48 ml, '
102 i i
6.5 mmol) was added to the reaction mixture to ensure reaction completion. The reaction was then cooled to 0 °C and quenched with sat. NaHCOj, then extracted with DCM (5 ml x 3), and the combined organic layers were washed with water (5 ml x 2), brine (5 ml x l), dried (Na2SC>4), and concentrated to give the crude product. The crude material was absorbed onto silica and eluted off a 24 g Gold Isco column using 0-l 5-25-40-100% (30% MeOH/DCM). The desired fractions were combined and concentrated to provide the desired compound. LCMS-ESF (m/z): [M+H]+: 458.22. Ή NMR (300 MHz, d6-DMSO) δ: 9.48 (s, 1H), 8.54 (s, 1H), 8.41 (s, 1 H),8.11 (s, 1H), 7.95 (d, 2H), 7.6 (s,lH), 6.98 (d, 2H), 6.2 (s, 2H), 4.58-4.45 (dt, 4H), 3.3 (m, 1H), 3.14 (t, 4H), 2.50-2.4 (dt,4H), 2.33 (s, 1H).
Altematively, compound ΧΠ could be taken directly to this step and similarly de-protected to provide the 5-chloropyrazine substituted analog.
103
Ëxample 2. Préparation of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lh2n
(Boc)2O
DMAP DCM (BPin)2
KOAc Pd(dba) X-phos dioxane yl)phenyl)imidazoJ1^2-a]pyrazin-8-amine (2)
Pd(PPh3)4 dimethoxyethane
CHEMISTRY A
CHEMISTRY B
XV
TFA DCM
2-Bis(tert-butoxycarbonyl)amîno-6-bromopyrazine XIV: To a mixture of 65 bromopyrazin-2-amine (5 g, 28.7 mmol) and di-tert-butyl dicarbonate (25.09 g, 114.94 mmol) was added DCM (10 ml) followed by DMAP (0.351 g, 29 mmol). The reaction was heated to 55 °C for Ih, cooled to RT, the reaction was partitioned between water and DCM, purified on silica gel and concentrated to provide of 2-bis(tert-butoxycarbonyl)amino-6bromopyrazine XTV. LCMS-ESI+ (m/z). [M+H]+: 374.14. Ή NMR (DMSO) δ: 8.84(d,
2H), 1.39 (s, 18H).
104 tert-Butyl (6-(6-(bis(tert-butoxycarbonyl)amino)pyrazin-2-yl)imidazo[l,2a|pyrazin-8-yl)(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)carbamate XVICHEMISTRY A route: tert-Butyl4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl(6(tributylstannyl)imidazo[l,2-a]pyrazin-8-yl)carbamate V (215 mg, 0.291 mmol), was combined with 2-bis(tert-butoxycarbonyl)amino-6-bromopyrazine XIV (217.58 mg, 0.581 mmol), bis(triphenylphosphine)palladium(II) dichloride(30.61 mg, 0.044 mmol) and 1,4dioxane (5ml). The reaction mixture was stirred in a microwave reactor at 120 °C for 30 min. The reaction mixture was quenched with saturated KF, extracted with EtOAc, purified on silica gel, eluted with EtOAc. The desired fractions were combined and concentrated to provide 100 mg (46% yield) of tert-butyl (6-(6-(bis(tert-butoxycarbonyl)amino)pyrazin-2yl)imidazo[l ,2-a]pyrazin-8-yl)(4-(4-(oxetan-3-yl)piperazin-l -yl)phenyl)carbamate XVI. LCMS-ESf (m/z): [M+H]+: 744.4. Ή NMR (300 MHz d6-DMSO) δ: 9.37 (s, IH), 9.18 (s, IH), 8.77 (s, IH), 8.33 (d, IH), 7.87 (d, IH), 7.28-7.25 (d, 2H), 6.92-6.89 (d, 2H), 4.55-4.41 (m, 4H), 3.4 (m,lH), 3.14-3.11 (m,4H), 2,37-2.34 (m, 4H), 1.37 (s, 18H), 1.3 (s, 9H).
tert-Butyl (6-(6-(bis(tert-butoxycarbonyl)amino)pyrazin-2-yl)imidazo[l,2a)pyrazin-8-yl)(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)carbamate XVICHEMISTRY B route: Step 1 : To a dry 250 mL round-bottomed flask was added 2bis(tert-butoxycarbonyl)amino-6-bromopyrazine XIV (10g, l .Oequiv, 2.67mmol), KOAc (790mg, 8.02mmol, 3.0equiv), 4,4,4’,4',5,5,5',5’-octamethyl-2,2’-bi(l,3,2-dioxaborolane) (750mg, 2.94mmol, l.lequiv), Pd(dba) (171mg, 0.187mmol, 0.07equiv) and X-phos (128mg, 0.267mmol, O.lequiv) followed by 1,4-dioxane (25mL) and the solution was sonicated for 5 min and then purged with N2 gas for 5 min. The flask with contents was then placed under N2 atmosphère and heated at 110 °C for 90 min. Once full conversion to the pinacolboronate was achieved by LCMS, the reaction was removed from heat and allowed to cool to RT. Once cool, the reaction contents were filtered through Celite and the filter cake was washed 3 x 20 mL EtOAc. The résultant solution was then concentrated down to a deep red-orange syrup providing N, N-BisBoc 6-(4,4,5,5-tetramethyl-l,3,2dioxaborolan-2-yl)pyrazin-2-amine XV, which was used directly in the next step.
Step 2: The freshly formed N, N-BisBoc 6-(4,4,5,5-tetramethyl-l,3,2dioxaborolan-2-yl)pyrazin-2-amine XV (2.67 mmol based on 100% conversion, 2.0 equiv
105 based on bromide) was dissolved in 20 Ml of l ,2-dimethoxyethane and to that solution was added tert-butyl (6-bromoimidazo[l ,2-a]pyrazin-8-yl)(4-(4-(oxetan-3-yl)piperazin-l yl)phenyl)carbamate IV (707mg, 1.34mmol, l.Oequiv), Na2CO3 (283mg, 2.67mmol, 2.0equiv), Pd(PPh3)4 (I55mg, O.l34mmol, O.lequiv) and water (lOmL) and the solution was 5 degassed for 5 min using N2 gas. The reaction was then placed under N2 atmosphère and heated at 110 °C for 90 min. LCMS showed complété consumption of the bromide starting material and the reaction was removed from heat and allowed to cool to RT. The reaction was diluted with 100 mL water and 100 mL 20% MeOH/DCM and the organic layer was recovered, extracted 1 x sat. NaHCCh, 1 x sat brine and then dried over Na2SÛ4. The solution was then filtered and concentrated down to an orange-red solid. The sample was then slurried in warm MeOH, sonicated then filtered, washing 2 x 20 mL with cold MeOH and then the cream-colored solid was dried on hi-vacuum ovemight to yield 905 mg of tertbutyl (6-(6-(bis(tert-butoxycarbonyl)amino)pyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)(4-(4(oxetan-3-yl)piperazin-l -yl)phenyl)carbamate XVI.
6-(6-Amînopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l^-a]pyrazin-8-amine (2): To a solution of tert-butyl (6-(6-(bis(tertbutoxycarbonyl)amino)pyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)carbamate XVI (200 mg, 0.269 mmol) in DCM (2 ml) was added TFA (0.5 ml, 6.578 mmol). The reaction was stirred at rt for 16h, saturated sodium bicarbonate was added, extracted with EtOAC and purified on silica gel, eluted with 5%MeOH /EtOAc, 20%MeOH / EtOAc. The desired fractions were combined and concentrated to provide the title compound 2. LCMS-ESF (m/z): [M+H]+: 444.2. Ή NMR (300 MHz dô-DMSO) δ: 9.5 (s,lH), 8.588 (s, IH), 8.47 (s, IH), 8.12 (d, IH), 7.95-7.92 (d, 2H), 7.88 (s, IH), 7.62 (s, IH), 6.99-6.96 (d, 2H), 6.46 (s, 2H), 4.57-4.53 (m, 2H), 4.48-4.44 (m, 2H), 3.43 (m, IH), 3.15-3.12 (m, 4H), 2.41-2.38 (m,4H).
106 i
Example 2 - Altemate Synthesis (Boc)2N
Pd(amphos)CI2, K2CO3, water,
B2(pin)2, KOProp, Pd(amphos)CI2 toluene
H2SO41 water
Di-/^r/-butyl {6-[8-({4-[4-(oxetan-3-yl)piperazin-l-yl]phenyl}amino)imidazo [1,25 a]pyrazin-6-yl]pyrazin-2-yl}imidodicarbonate:
To a 720 L reactor, was added di-/er/-butyl (6-bromopyrazin-2-yl)imidodicarbonate (18.5 kg, 1.41 equiv, 49 mol), bis(pinacolato)diboron (13.8 kg, 1.56 equiv, 54 mol), potassium propionate (11.9 kg, 3.02 equiv, 106 mol), and bis(di-teri-butyl(4-dimethylaminophenyl) phosphine)dichloropalladium (1.07 kg, 0.0043 equiv, 1.5 mol), followed by degassed toluene (173 L). The mixture was degassed then heated at 65 °C until the reaction was deemed complété (0% tert-butyl 2-((6-bromopyrazin-2-yl)(tert-butoxycarbonyl)amino)-2oxoacetate) by UPLC. Upon completion, the reaction was cooled to 23 °C. Once cooled, 6bromo-Y-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l ,2- a]pyrazin-8-amine (15.0 kg, 1.00 equiv, 35 mol) was added and the mixture was degassed. A degassed aqueous
107 potassium carbonate solution prepared using water (54 L) and potassium carbonate (20.6 g, 4.26 equiv, 149 mol) was then added to the reaction mixture and the reactor contents was degassed. The reactor contents was heated at 65 °C until reaction was deemed complété (1% 6-bromo-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine) by UPLC. Upon completion, the reaction was cooled to 24 °C.
The cooled mixture was concentrated and then diluted with dichloromethane (300 L), transferred to a 1900 L reactor and rinsed forward with dichloromethane (57 L). TV-acetyl-Lcysteine (3.8 kg) was charged and the mixture was agitated for 15 h. Water (135 L) was then added and the mixture was filtered and rinsed forward with dichloromethane (68 L). The organic layer was recovered and washed with a brine solution prepared using water (68 L) and sodium chloride (7.5 kg).
The résultant organic layer was polish filtered then concentrated and zerz-butyl methyl ether (89.9 kg) was slowly charged keeping the température at 31 °C. The contents was cooled to 0 °C and aged, then filtered and rinsed with ZerZ-butyl methyl ether (32.7 kg) and dried at 40 °C to give 17.2 kg of di-ZerZ-butyl {6-[8-({4-[4-(oxetan-3-yl)piperazin-lyl]phenyl} amino)imidazo[l ,2-a]pyrazin-6-yl]pyrazin-2-yl} imidodicarbonate.
LCMS-ESI+ (m/z). [M+H]+: 644.3. Ή NMR (400 MHz, CDC13) δ: 9.43 (s, 1H), 8.58 (s, 1H), 8 53 (s, 1H), 8.02 (s, 1H), 7.84 (m, 2H), 7.63 (d, 1H), 7.61 (d, 1H), 7.04 (m, 2H),4.71 (m,4H), 3.59 (m,lH), 3.27 (m, 4H), 2.55 (m, 4H), 1.46 (s, 18H).
6-(6-Aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[14a]pyi'azin-8-amine succinate (Example 2):
To a sluny of di-tert-butyl {6-[8-({4-[4-(oxetan-3-yl)piperazin-lyl]phenyl)amino)imidazo[l,2-a]pyrazin-6-yl]pyrazin-2-yl}imidodicarbonate (225 g, 0.35 mol, 1 mol eq.) in water (12 parts) was added a solution of sulfuric acid (3.1 parts, 6.99 mol, 20 mol eq.) in water (5 parts). The reaction was heated to ca. 40 °C and stirred at this température for ca. 4 h at which point the reaction is deemed complété. The reaction mixture was cooled to ca. 22 °C, acetone (3 parts) was chaiged and a solution of sodium carbonate (4.1 parts, 8.75 mol, 25.0 mol eq.) in water (15 parts) was added. The resulting sluny was
108 filtered and the wet cake was washed with water in portions (4 x 1 parts), then with tertbutyl methyl ether (4 parts). The wet cake (Example 2 free base) was dried at ca. 60 °C. To the slurry of dry Example 2 free base in 2-propanol (2.3 parts) was added a solution of succinic acid (Based on the isolated Example 2 free base: 0.43 parts, 1.6 mol eq.) in 25 propanol (15 parts). The resulting slurry was heated to ca. 40 °C and stirred at this température for ca. 2 h and then cooled to ca. 22 °C, foliowed by a stir period of ca. 16 h. The slurry was filtered at ca. 22 °C and the wet cake was washed with 2-propanol (5 parts) and dried at ca. 60 °C to affbrd the product.
LCMS-ESI+ (m/z). [M+H]+: 620.65. ’H NMR (400 MHz d6-DMSO) Ô: 12.2 (broad s,l 5H), 10 9.58 (s, 1H), 8.63 (s, 1H), 8.50 (s, 1H), 8.15 (s, 1H), 7.95 (d, 2H), 7.90 (s, 1H), 7.64 (s, 1H),
7.00 (d, 2H), 6.50 (s, 2H), 4.52 (dd, 4H), 3.45 (m, 1H), 3.19 (m, 4H), 2.40 (m, 10H).
109
Example 3. Préparation of (R)-(4-(4-((6-(6-aminopyrazin-2-yl)imidazo[14~a]pyrazin8-yl)amino)phenyl)morpholin-2-yl)methanol (3)
Br
SnBu3, TB Al, dioxane, Pd (PPh3)4
Boc2O
100°C ovemight p-tube
DCM DIEA DMAP
(R)-(4-(4-((6-Bromoimidazo[l^-aJpyrazin-8-yi)amino)phenyl)morpholin-25 yl)methanol XVII: In a 250 mL round bottom flask equipped with a condenser was placed 6,8-dibromoimidazo[l,2-a]pyrazine (2000 mg, 7.22 mmol) and added 30 mL isopropanol followed by N,N-diisopropylethylamine (2.52 ml, 14.44 mmol) and (R)-(4-(4aminophenyl)morpholin-2-yl)methanol (1504.12 mg, 7.22 mmol). The reaction was heated to reflux (oil bath 95 °C) ovemight. The reaction was cooled and précipitâtes were collected
110 by filtration and washed with isopropanol followed by hexanes to give the desired compound XVII.
(R)-tert-Butyl (6-bromoimidazo|l^-a|pyiazin-8-yl)(4-(2-(((tertbutoxycarbonyl)oxy)methyl)moipholino)phenyl)carbamate XVIII: In a 250 mL round bottom flask was placed (R)-(4-(4-((6-bromoimidazo[l,2-a]pyrazin-8yl)amino)phenyl)morpholin-2-yl)methanol XVH (2.80g, 6.9mmol) and added DCM followed by triethylamine (2.9mL, 2.1g, 20.8mmol), DMAP (63g, 0.52mmol) and di-tertbutyl dicarbonate (3.8g, 17.3mmol). The reaction was stirred ovemight then diluted with DCM and water, separated, washed with brine, dried over Na2SÛ4, filtered and concentrated under reduced pressure. The crude material was purified by chromatograophy: ISCO 40 g silica with 25 g silica loader, eluting with 0-100% EtOAc/hexanes to give compound XVIII.
(R)-tert-Butyl (4-(2-(((tertbiitoxycarbonyl)oxy)methyl)morpholino)phenyl)(6-(tributylstannyl)imidazo|l,2a|pyrazin-8-yl)carbamate XIX: (R)-tert-Butyl (6-bromoimidazo[l,2-a]pyrazin-8-yl)(4-(2(((tert-butoxycarbonyl)oxy)methyl)morpholino)phenyl)carbamate XVHI was reacted according to the analogous method of Example Intermediate 1.01 to provide (R)-tert-butyl (4-(2-(((tert-butoxycarbonyl)oxy)methyl)morpholino)phenyl)(6(tributylstannyl)imidazo[l,2-a]pyrazin-8-yl)carbamate XIX.
(R)-tert-Butyl (6-(6-(bis(tert-butoxycarbonyl)amino)pyrazin-2y l)imidazo 11,2-a] py razin-8-y 1)(4-(2-((( tertbutoxycarbonyl)oxy)methyl)morpholino)phenyl)carbamate XX: (R)-tert-Butyl (4-(2(((tert-butoxycarbonyl)oxy)methyl)morpholino)phenyl)(6-(tributylstannyl)imidazo[l,2a]pyrazin-8-yl)carbamate XIX was reacted with 2-Bis(tert-butoxycarbonyl)amino-6bromopyrazine XIV according to the analogous method of CHEMISTRY A as described in Example 2 to provide the desired compound (R)-tert-butyl (6-(6-(bis(tertbutoxycarbonyl)amino)pyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)(4-(2-(((tertbutoxycarbonyl)oxy)methyl)morpholino)phenyl)carbamate XX.
111 (R)-(4-(4-((6-(6-Amino-5-methy Ipy razin-2-y l)imidazo 11 ^-a] pyrazin-8yl)amino)phenyl)morpholin-2-yl)methanol (3): (R)-tert-butyl (6-(6-(bis(tertbutoxycarbonyl)amino)pyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)(4-(2-(((tertbutoxycarbonyl)oxy)methyl)morpholino)phenyl)carbamate XX (460 mg, 0.56 mmol) in
DCM was added to a round bottom flask, and TFA (1.29 ml, 16.85 mmol) was added. The reaction was partially complété after stirring ~5 hours. Added an additional 10 eq TFA and stirred ovemight, then concentrated under reduced pressure. 10% MeOH/DCM (~100mL) and sat.aq. sodium bicarbonate were added and stirred 15 min, separated, extracted with ~100mL 10%MeOH/DCM. The organic layers were combined, washed with brine, dried over Na2SÛ4, filtered and concentrated under reduced pressure and dried under vacuum. The resulting solid was triturated with DCM, collected solids via filtration and dried under vacuum to give compound 3. LCMS-ESI+ (m/z): [M+H]+: 419.2. *H NMR (300 MHz deDMSO) Ô: 9.57 (s, IH), 8.59 (s, IH), 8.47 (s, IH), 8.13 (d, J= 1.2 Hz, IH), 8.06 - 7.90 (m, 2H), 7.87 (s, IH), 7.62 (d, J= 1.1 Hz, IH), 7.05-6.93 (m, 2H), 6.49 (s, 2H),4.78 (t, J = 5.8
Hz, 1 H), 3.98-3.87 (m, IH), 3.71 - 3.36 (m, 7H), 2.63 (td, J= 11.7, 3.4 Hz, lH),2.37(dd, J = 12.1, 10.5 Hz, IH). The corresponding (S) isomer, or racemic mixture of compounds is prepared similarly, using (S)-(4-(4-aminophenyl)morpholin-2-yl)methanol or a racemic mixture of (4-(4-aminophenyl)morpholin-2-yl)methanol, respectively, in the first step.
112
Example 4. Préparation of6-(6-aminopyrazin-2-yl)-5-methyl-N-(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)imidazo[l^-a|pyrazin-8-amine (4)
CHEMISTRY B
tert-Butyl (6-(6-(bis(tert-butoxycarbonyl)amino)pyrazin-2-yl)-55 methylimidazo[l,2-a]pyrazin-8-yl)(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)carbamate
XXI: tert-Butyl (6-bromo-5-methylimidazo[l ,2-a]pyrazin-8-yl)(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)carbamate X was reacted with XV according to the methods of CHEMISTRY B as described in Example 2 to provide the desired compound XXI.
6-(6-aminopyrazin-2-yl)-5-methyl-N-(4-(4-(oxetan-3-yl)piperazin-l10 yl)phenyl)iinidazo[l,2-a]pyrazin-8-ainine (4): The compound tert-butyl (6-(6-(bis(tertbutoxycarbonyl)amino)pyrazin-2-yl)-5-methylimidazo[l,2-a]pyrazin-8-yl)(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)carbamate XXI was de-protected by the analogous method described in Example 2 to provide the desired compound 4. LCMS-ESI+ (m/z): [M+H]+: 458.32. Ή NMR (300 MHz, d6-DMSO) δ: 9.28 (s, IH), 8.28 (s, IH), 8.04 (s, IH), 7.89 (d,
2H), 7.83 (s, IH), 7.7 (s,lH), 6.91 (d, 2H), 6.46 (s, 2H), 4.6-4.4 (dt, 4H), 3.43 (m, IH), 3.1 (t, 4H), 2.49 (s,3H), 2.4 (t,4H).
113
Example 5. Préparation of 2-(5-((6-(6-aminopyrazin-2-yl)imidazo|14-a]py«,azin-8yl)amino)-2-(4-(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol (5)
H4
2-(2-(2-Fluoro-5-nitrophenoxy)ethoxy)tetrahydro-2H-pyran XXII: A mixture of 2-fluoro-5-nitrophenol (4 g, 25 mmol), 2-(2-bromoethoxy)tetrahydro-2H-pyran (4.4 mL, 28 mmol) and potassium carbonate (4.2 g 30 mmol) in DMF (50 mL) was stirred at 50 °C for 16h. The reaction was cooled to room température, diluted with EtOAc and H2O. The aqueous layer was separated and extracted with EtOAc. The combined organic extracts were washed with H2O (5x's to remove DMF) and brine and dried over sodium sulfate. The resulting residue was purified by column chromatography ISCO Rf (40 g column) eluting with a gradient of 100% hexanes - 1:1 hexanes:EtOAc to provide 2-(2-(2fluoro-5-nitrophenoxy)ethoxy)tetrahydro-2H-pyran ΧΧΠ.
l-(4-Nitro-2-(2-((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)-4-(oxetan-3yl)piperazine XXIII: A mixture of 2-(2-(2-fluoro-5-nitrophenoxy)ethoxy)tetrahydro-2Hpyran XXII (1550 mg, 5.43 mmol), l-(oxetan-3-yl)piperazine (772 mg, 5.43 mmol) and potassium carbonate (1126.41 mg, 8.15 mmol) in NMP (6 mL) was stirred at 100 °C for 8h. The aqueous layer was separated and extracted with EtOAc. The combined organic extracts were washed with H2O (5 x to remove NMP) and brine and dried over sodium sulfate. The resulting residue was purified by column chromatography ISCO Rf (24 g column) eluting with a gradient of 100% DCM- 60:35:5 DCM:Et2O:MeOH to provide 1(4-nitro-2-(2-((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)-4-(oxetan-3-yl)piperazine xxm
4-(4-(Oxetan-3-yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2yl)oxy)ethoxy)aniline XXIV: To a suspension of 1 -(4-nitro-2-(2-((tetrahydro-2H-pyran-2yl)oxy)ethoxy)phenyl)-4-(oxetan-3-yl)piperazine ΧΧΙΠ (2100 mg, 5.1 mmol) in éthanol (50 mL) was added 10% Pd/C (50% wet, 390 mg dry weight) in a 500-mL Pair hydrogénation bottle. The bottle was evacuated, charged with hydrogen gas to a pressure of 50 psi and shaken at rt for 2 h on a Parr hydrogénation apparatus. The reaction mixture was filtered, and washed with éthanol. The filtrate was concentrated in vacuo to give 4-(4-(oxetan-3yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)aniline XXIV.
6-Bromo-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2 yl)oxy)ethoxy)phenyl)imidazo[l,2-a]pyrazm-8-amme XXV: To a solution of 4-(4(oxetan-3-yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)aniline XXTV
115 (619 mg, 2.17 mmol) and 6,8-dibromoimidazo[l,2-a]pyrazine (601 mg, 2.2 mmol) in IPA (15 mL) was added N,N-Diisopropylethylamine (0.95 ml, 5.43 mmol). The mixture was stirred at 110 °C for 16 h. After this time, DCM (10 mL) and sat aqueous NaHCCh (15 mL) were added. The aqueous layer was separated and extracted with DCM (2x10 mL). The combined organic extracts were washed with brine (10 mL) and dried over sodium sulfate. The resulting residue was purified by column chromatography ISCO Rf (24 g column) eluting with a gradient of 100% DCM - 60:35:5 DCM:Et2O:MeOH to provide 6-bromo-N(4-(4-(oxetan-3-yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2yl)oxy)ethoxy)phenyl)imidazo[l ,2-a]pyrazin-8-amine XXV.
tert-Butyl (6-bromoimidazo[l,2-a]pyrazm-8-yl)(4-(4-(oxetan-3-yl)piperazinl-yl)-3-(2-((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)carbamate XXVI: 6-BromoN-(4-(4-(oxetan-3-yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2yl)oxy)ethoxy)phenyl)imidazo[l,2-a]pyrazin-8-amine XXV (1.2 g, 2.4 mmol) was reacted according to the analogous method described in Intermediate Example 1.01 (conversion of ΠΙ to IV) to provide tert-butyl (6-bromoimidazo[l,2-a]pyrazin-8-yl)(4-(4-(oxetan-3yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)carbamate XXVI.
tert-butyl (6-(6-(bis(tert-butoxycarbonyl)amino)pyrazin-2-yl)imidazo(l,2a]pyrazin-8-yl)(4-(4-(oxetan-3-yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2yl)oxy)ethoxy)phenyl)carbamate XXVII: tert-Butyl (6-bromoimidazo[l,2-a]pyrazin-8yl)(4-(4-(oxetan-3-yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2yl)oxy)ethoxy)phenyl)carbamate XXVI was reacted with XV according to the methods of CHEMISTRY B as described in Example 2 to provide the desired compound tert-butyl (6(6-(bis(tert-butoxycarbonyl)amino)pyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)(4-(4-(oxetan-3yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)carbamate XXVn.
2-(5-((6-(6-aminopy razin-2-yl)imidazo{l,2-a]pyrazin-8-yl)amino )-2-(4(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol (5): The compound tert-butyl (6-(6(bis(tert-butoxycarbonyl)amino)pyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)(4-(4-(oxetan-3yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)carbamate XXVÏÏ (313 mg, 0.35 mmol) was de-protected by the analogous method described in Example 2 to provide 2-(5-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)amino)-2-(4-(oxetan-3116 yl)piperazin-l-yl)phenoxy)ethanol (5). LCMS-ESI+ (m/z): [M+H]+: 504.3. Ή NMR (300 MHz, dô-DMSO) δ: 9.52 (s, IH), 8.61 (s, IH), 8.51 (s, 1 H), 8.14 (d, J = 1.1 Hz, IH), 7.89 (s, IH), 7.81 (d, J= 2.3 Hz, IH), 7.74 - 7.60 (m, 2H), 6.90 (d, J= 8.6 Hz, IH), 6.47 (s, 2H), 5.74 (s, IH), 4.86-4.76 (m, 1H),4.5O (dt, J= 25.6, 6.3 Hz, 4H), 4.04 (t, J= 5.1 Hz, 2H), 5 3.73 (q, J= 5.1 Hz, 2H), 3.51 - 3.42 (m, IH), 3.02 (s, 4H), 2.40 (s, 4H).
117
Example 6. Préparation of 2-((4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazm-8yl)amino)phenyl)piperazin-l-yl)methyl)propane-13~diol (6)
DCM
CI2Pd(PPh3)2 dioxane pwave, 140 °C
Oxetane-3-carbaldehyde XXVIII: To a round-bottomed flask equipped with a stirring bar, oxetan-3-ylmethanol (2.00 g, 22.7 mmol) was dissolved in DCM (50 mL) and Dess-Martin periodinane (10.67 g, 28.38 mmol) was added in one portion. The reaction
118 mixture was stirred at RT ovemight. The solids were filtered through celite, and washed with DCM (3 mL x 5). The filtrate was removed and concentrated in vacuo and the resulting crude oxetane-3-carbaldehyde XXVm was used in the next step directly.
l-(4-Nitrophenyl)-4-(oxetan-3-ylmethyl)piperazine XXIX: To a roundbottomed falsk equipped with a stirring bar, oxetane-3-carbaldehyde XXVIII (0.977 g, 11.35 mmol), l-(4-nitrophenyl)piperazine (1.18 g, 5.68 mmol) in DCM (100 mL), and HOAc (1.70 g, 28.38 mmol) in DCM (2 mL) were added. After 5 minutes, NaBH(OAc)3 (24.06 g, 113.05 mmol) was added. The resulting mixture was stirred at room température for 2 h. Most volatiles were removed in vacuo. DCM (200 mL) was added, followed by saturated NaHCO3 aquous solution (20 mL), and the resulting mixture was stirred for 20 minutes. The organic phase was separated and washed with saturated NaHCO3 aqueous solution (20 mL x 3), brine (20 mL x 1), dried over Na2SÛ4, filtered and solvents were removed in vacuo. The residue was passed through a silica gel column (MeOH: DCM = 0: 100 to 5: 95 to 25: 75) to provide the desired compound XXIX.
4-(4-(Oxetan-3-ylmethyl)piperazin-l-yl)aniline XXX: To a round-bottomed flask equipped with a stirring bar, were added l-(4-nitrophenyl)-4-(oxetan-3ylmethyl)piperazine XXIX (3.20 g, 11.54 mmol), éthanol (60 mL) and water (60 mL). Following the addition of iron (4.51 g, 80.77 mmol) and ammonium chloride (4.32 g, 80.77 mmol), the reaction mixture was heated at 80 °C for 1 h, then filtered through Celite and washed with DCM (5 mL x 5). The resulting filtrate was extracted with DCM (20 mL x 3). The combined organic extracts were washed with water (20 mL x 2), brine (20 mL x 1), dried over Na2SC>4, and concentrated in vacuo. The desired 4-(4-(oxetan-3ylmethyl)piperazin-l-yl)aniline XXX was obtained.
6-Bromo-N-(4-(4-(oxetan-3-y Imethy l)pi perazin-1 -y l)phenyl)imidazo [ 1,2a|pyrazin-8-amine XXXI: To a seal tube equipped with a stirring bar, 4-(4-(oxetan-3ylmethyl)piperazin-l-yl)aniline XXX ( 1.19 g, 4.81 mmol), 6,8-dibromoimidazo[l,2a]pyrazine (1.33 g, 4.81 mmol), isopropanol (24.1 mL), and diisopropylethylamine (1.37 g, 10.58 mmol) were added, and the reaction mixture was heated at 100 °C ovemight. Most solvents were removed in vacuo and DCM (200 mL) was added to the mixture. The solution
119 was washed with H2O (20 mL x 2), brine (20 mL x 1), dried over Na2SO4, filtered and solvents were removed in vacuo. The resulting residue was passed through a silica gel column (MeOH: DCM = 5: 95) and light red solids were obtained as the desired compound XXXI, 0.692 g.
tert-Butyl (6-bromoimidazo[l,2-a]pyrazin-8-yl)(4-(l-(oxetan-3ylmethyl)piperidin-4-yl)phenyl)carbamate XXXII: To a round-bottomed flask equipped with a stirring bar, were added 6-bromo-N-(4-(4-(oxetan-3-ylmethyl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine XXXI (560 mg, 1.27 mmol), DCM (11 mL), ditert-butyl dicarbonate (414.4 mg, 1.90 mmol), and triethylamine (640.5 mg, 6.33 mmol). The reaction mixture was heated at 50 °C overnight. DCM (200 mL) was added, and the resulting solution was washed with water (20 mL x 2), brine (20 mL x 1 ), dried over Na2SO4, filtered and solvents were removed in vacuo. Column chromatography gave the desired compound ΧΧΧΠ as yellow solids.
tert-Butyl (6-(6-(bis(tert-butoxycarbonyl)amino)pyrazin-2-yl)imidazo[l,2a]pyrazin-8-yl)(4-(4-(oxetan-3-ylmethyl)piperazin-l-yl)phenyl)carbamate XXXIII: To a round-bottomed flask equipped with a stirring bar, tert-butyl (6-bromoimidazo[l,2a]pyrazin-8-yl)(4-(4-(oxetan-3-ylmethyl)piperazin-l-yl)phenyl)carbamate ΧΧΧΠ (150 mg, 0.276 mmol), N, N-BisBoc 6-(4,4,5,5-tetramethyl-l,3,2-dioxaborolan-2-yl)pyrazin-2-amine XV (255.8 mg, 0.607 mmol) in DME (2.3 mL), Pd(PPh3)4(16.0 mg, 0.14 mmol), Na2CO3 aqueous solution (1.0 N, 0.91 mL, 0.91 mmol), and DME (2 mL) were added. The mixture was heated at 75 °C for 2 , then DCM (200 mL) was added and the resulting mixture was washed with water (30 mL x 3), brine (30 mL x 1), dried over MgSÛ4, filtered, and solvents were removed in vacuo. Purification by silica gel column (MeOH: DCM = 5: 95) gave the desired compound ΧΧΧΠΙ.
2-((4-(4-((6-(6-aminopyrazin-2-yl)imidazo|l»2-a]pyrazin-8yl)amino)phenyl)piperazin-l-yl)methyl)propane-13-diol (6): To a solution of tert-butyl (6-(6-(bis(tert-butoxycarbonyl)amino)pyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)(4-(4(oxetan-3-ylmethyl)piperazin-l-yl)phenyl)carbamate ΧΧΧΕΠ (250 mg, 0.33 mmol) in DCM (30 mL) was added TFA (940.3 mg, 8.25 mmol). The resulting mixture was stirred at room température for overnight. More TFA (752.2 mg, 6.60 mmol) was added and stirred at room
120 température ovemight. Most solvents were removed in vacuo, DCM (200 mL) and saturated NaHCOj aqueous solution (30 mL) were added and the resulting mixture was stirred for 30 minutes. The organic phase was separated, washed with saturated NaHCÛ3 aqueous solution (20 mL x 4), brine (20 mL x l ). The aqueous phase was extracted with DCM (30 mL x 2). The combined organic phases were washed with brine (20 mL x 1), dried over Na2SO4, filtered, and solvents were removed in vacuo. The crude material was purified on ISCO column, MeOH: DCM = 0:100 to 5:95 to 7.5: 92.5 to 25: 75 to elute the desired compounds. Two compounds were obtained, the first is the oxetane compound; and the other the desired compound 6. LCMS-ESF (m/z): [M+H]+: 476. Ή NMR (300 MHz, d610 DMSO)Ô:9.51 (s, 1 H), 8.60 (s, 1 H), 8.49 (s, 1 H), 8.14 (d, J = 1.5 Hz, 1 H), 7.95 (d,J = 9
Hz, 2 H), 7.90 (s, 1 H), 7.64 (s, 1 H), 6.99 (d, J = 9 Hz, 2 H), 6.48 (s, 2 H), 4.51 (broad S, 2 H), 3.43 (d, J = 6 Hz, 4 H), 3.12 (broad m, 4 H), 2.54 (broad m, 4 H), 2.34 (d, J = 7.2 Hz, 2 H), 1.83 (m, 1 H).
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Example 7. Préparation of 2-(5-( (6-(6-ammo-5-methylpyrazin-2-yl)imidazo[l,2a]pyrazin-8-yl)amino)-2-(4-(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol (7)
tert-butyl tert-butoxycarbonyl(6-(8-((tert-butoxycarbonyl)(4-(4-(oxetan-35 yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2yl)oxy)ethoxy)phenyl)amino)imidazo|l,2-a|pyrazin-6-yl)-3-chIoropyrazin-2yl)carbamate XXXIV: A flask equipped with a reflux condenser was charged with tertbutyl (6-bromoimidazo[l,2-a]pyrazin-8-yl)(4-(4-(oxetan-3-yl)piperazin-l-yl)-3-(2((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)carbamate XXVI (prepared as described in
Example 5) (352 mg, 0.52 mmol), 2-(bis-boc-amino)-3-chloro-6-(4,4,5,5-tetramethyl-l,3,2dioxaborolan-2-yl)pyrazine (prepared by analogous method as used in Example 2 for the préparation of compound XV) (500 mg, 1.1 mmol), Pd(PPhj)4 (30 mg, 0.03 mmol) in sodium carbonate (1.6 mL, IM in H2O) and DME (4.8 mL). The mixture was heated to reflux for 1 h. The reaction was cooled to room température, diluted with DCM and H2O.
The aqueous layer was separated and extracted with DCM. The combined organic extracts
122 were washed with brine, dried over sodium sulfate, filtered and concentrated under reduced pressure. The resulting residue was purified by column chromatography ISCO Rf (4 g column) eluting with a gradient of 100% DCM - 100% 60/35/5 DCM/EtzO/MeOH, appropriate fractions were combined and concentrated to provide the desired compound tertbutyl tert-butoxycarbonyl(6-(8-((tert-butoxycarbonyl)(4-(4-(oxetan-3-yl)piperazin-l-yl)-3(2-((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)amino)imidazo[l,2-a]pyrazin-6-yl)-3chloropyrazin-2-yl)carbamate XXXIV.
tert-butyl tert-butoxycarbonyl(6-(8-((tert-butoxycarbonyl)(4-(4-(oxetan-3yl)piperazin-l-yl)-3-(2-((tetrahydro-2H-pyran-2yl)oxy)ethoxy)phenyl)amino)imidazo|l,2-a]pyrazin-6-yl)-3-methylpyrazin-2yl)carbamate XXXV: A micro wave vial was charged with tert-butyl tertbutoxycarbonyl(6-(8-((tert-butoxycarbonyl)(4-(4-(oxetan-3-yl)piperazin-l-yl)-3-(2((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)amino)imidazo[l,2-a]pyrazin-6-yl)-3chloropyrazin-2-yl)carbamate XXXIV (258 mg, 0.28 mmol), methylboronic acid (503 mg, 8.4 mmol), Pd(PPh3)4 (32 mg, 0.03 mmol) in sodium carbonate (0.8 mL, IM in Η2Ο) and DME (2.5 mL). The mixture was heated at 150 °C for 20 min. The reaction was cooled to room température, diluted with DCM and H2O. The aqueous layer was separated and extracted with DCM. The combined organic extracts were washed with brine, dried over sodium sulfate, filtered and concentrated under reduced pressure. The resulting residue was purified by column chromatography ISCO Rf (4 g column) eluting with a gradient of 100% DCM - 100% 75/18/7 DCM/Et2Û/MeOH to provide the desired compound tert-butyl tertbutoxycarbonyl(6-(8-((tert-butoxycarbonyl)(4-(4-(oxetan-3-yl)piperazin-l-yl)-3-(2((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)amino)imidazo[l,2-a]pyrazin-6-yl)-3methylpyrazin-2-yl)carbamate XXXV.
2-(5-((6-(6-Amino-5-methylpyrazin-2-yl)imidazo[l^-a)pyrazin-8-yl)amino)2-(4-(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol (7): To a solution of tert-butyl tertbutoxycarbonyl(6-(8-((tert-butoxycarbonyl)(4-(4-(oxetan-3-yl)piperazin-l-yl)-3-(2((tetrahydro-2H-pyran-2-yl)oxy)ethoxy)phenyl)amino)imidazo[l,2-a]pyrazin-6-yl)-3methylpyrazin-2-yl)carbamate XXXV (165 mg, 0.18 mmol) in DCM (2.2 mL) was added TFA (1.1 mL, 0.11 mmol). The mixture was stirred at rt for 16 h. The reaction was diluted
123 with 9:1 DCM:MeOH and Η2Ο. The aqueous layer was separated and extracted with 9:1 DCM:MeOH. The combined organic extracts were washed with brine, dried over sodium sulfate, filtered and concentrated under reduced pressure. The resulting residue was purified by column chromatography eluting with a gradient of 100% 75/18/7 DCM/EtiO/MeOH 100% 70/20/10 DCM/EtiO/MeOH to provide the desired comopund 2-(5-((6-(6-amino-5methylpyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)amino)-2-(4-(oxetan-3-yl)piperazin-lyl)phenoxy)ethanol (7, 56 mg, 59%). LCMS-ESF (m/z): [M+H]+: 518.2. Ή NMR (300 MHz, Je-DMSO) δ: 9.49 (s, IH), 8.56 (s, IH), 8.44 (s, 1 H), 8.13 (d, J = 1.1 Hz, 1 H), 7.85 7.66 (m, 2H), 7.62 (d, J = 1.1 Hz, IH), 6.90 (d, J= 8.6 Hz, IH), 6.25 (s, 2H), 4.87-4.77 (m, 1 H), 4.50 (dt, J = 25.2, 6.3 Hz, 4H), 4.04 (t, J = 5.1 Hz, 2H), 3.74 (q, J = 5.2 Hz, 2H), 3.51 - 3.39 (m, IH), 3.10 - 2.95 (m, 4H), 2.45 - 2.35 (m, 4H), 2.34 (s, 3H). Altematively, compound XXXIV could be taken directly to this step and similarly de-protected to provide the 5-chloropyrazine substituted analog.
Monomesylate and Succinate Forms
X-ray powder diffraction (XRPD) analysis of the monomesylate (MSA) and succinate forms of the compound of Example 2 herein were conducted on a diffractometer (PANanalytical XPERT-PRO, PANalytical B.V., Almelo, Netherlands) using copper radiation (Cu Κα, λ = 1.5418 A). Samples were prepared for analysis by depositing the powdered sample in the center of an aluminum holder equipped with a zéro background plate. The generator was operated at a voltage of45 kV and amperage of40 mA. Slits used were Soller 0.02 rad., antiscatter 1.0°, and divergence. The sample rotation speed was 2 sec. Scans were performed from 2 to 40° 2-thêta. Data analysis was performed by X’Pert Highscore version 2.2c (PANalytical B.V., Almelo, Netherlands) and X’Pert data viewer version 1.2d (PANalytical B.V., Almelo, Netherlands). The XRPD patterns for Mono MSA Forms I & Π were obtained using the instrument setting as follows: 45 KV, 40 mA, Cu Κα, λ = 1.5418 Â, scan range 2. - 40°, step size 0.0167°, counting time: 15.875 s. The XRPD patterns for Succinate Forms I & Π were obtained using the instrument
124 setting as follows: 45 KV, 40 mA, Cu Κα, λ = 1.5418 Â, scan range 2. - 40°, step size 0.0084°, counting time: 95.250 s.
'H NMR spectra of the monomesylate (MSA) and succinate forms of the compound of Example 2 were collected on a Varian 400-MR 400MHz instrument with 7620AS sample changer. The default proton parameters are as follows: spectral width: 14 to -2 ppm (6397.4 Hz); relaxation delay: 1 sec; acquisition time: 2.5559 sec; number of scans or répétitions: 8; température: 25 C. Samples were prepared in dimethyl sulfoxide-d6, unless otherwise stated. Off-line analysis was carried out using MNova software.
Example 8 - 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[14~a]pyrazin-8-amine monomesylate Form I
Methanesulfonic acid (MSA) sait Form I was prepared by dissolving 6-(6-aminopyrazin-2yl)-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine (Example 2) in 11 volumes of acetone/H2Û (36:64 vol. %) with 1 molar équivalent of methane sulfonic acid (MSA) at room température. The solution was then charged with 19 volumes of acetone over 1 hour and the reactor contents were stirred at room température ovemight.
XRPD analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine monomesylate Form I was conducted as described above and provided the diffraction pattern seen in Figure 1, with the peaks in the table below.
No. | Pos. [’2Th.] | Rel. Int. [%] |
1 | 19.6606 | 100 |
2 | 17.2746 | 93.07 |
3 | 17.8971 | 69.96 |
4 | 21.6306 | 65.74 |
5 | 25.7805 | 59.16 |
6 | 18.7593 | 51.5 |
7 | 13.7252 | 48.77 |
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8 | 15.7206 | 41.91 |
9 | 24.7364 | 38.09 |
10 | 18.4345 | 36.84 |
In one embodiment 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-l yl)phenyl)imidazo[l,2-a]pyrazin-8-amine monomesylate Form I may be charactenzed by XRPD peaks 19.7(19.6606), 17.3 (17.2746), 17.9 (17.8971), 21.6 (21.6306), and 25.8 (25.7805). In a further embodiment 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)imidazo[I,2-a]pyrazin-8-amine monomesylate Form I may be characterized by XRPD peaks 19.7 (19.6606), 17.3 (17.2746), 17.9 (17.8971 ), and 21.6 (21.6306). In another embodiment 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin1 -yl)phenyl)imidazo[l,2-a]pyrazin-8-amine monomesylate Form I may be characterized by XRPD peaks 6.0,6.2, 8.6, and 9.6.
NMR Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[I,2-a]pyrazin-8-amine Mono MSA Sait Form I, conducted as described above, provided the NMR spectrum seen in Figure 2.
Ή NMR (400 MHz, DMSO-dé) δ 10.57 (s, IH), 9.60 (s, IH), 8.62 (s, IH), 8.47 (s, IH), 8.17 (d, J = 1.2 Hz, IH), 8.03-7.96 (m, 2H), 7.90 (s, IH), 7.69 (d,J= 1.2 Hz, 1 H), 7.09 (d, J = 9.0 Hz, 2H), 4.78 (p, J = 8.0 Hz, 4H), 4.49 (m, IH), 4.00 - 2.8 (m, 10H), 2.32 (s, 3H).
Differential scanning calorimetry (DSC): DSC was performed for each of the examples indicated herein using a TA Instruments Q2000 DSC instrument. The sample was placed into an aluminum DSC pan, and the weight accurately recorded. The pan was covered with a lid, and then either crimped or hermetically sealed. The same cell was heated under a nitrogen purge at a rate of 10 °C/min, up to a final température of300 °C. Indium was used as the calibration standard.
A DSC analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form L, conducted as described above, is seen in Figure 3.
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Thermogravimetric analysis (TGA): TGA was performed for each of the examples indicated herein using a TA Instruments Q5000 TGA instrument. Each sample was placed in an aluminum sample pan and inserted into the TG fumace. The fumace was heated under nitrogen at a rate of 10 °C/min, up to a final température of 300 °C. The TGA fumace was calibrated using the magnetic Curie point method.
A TGA analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form I, conducted as described above, is seen in Figure 4.
Example 9 - 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyI)phenyl)imidazo|l^-a]pyiazin-8-amine monomesylate Form II
6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin8-amine Mono MSA Sait Form Π was prepared by drying 6-(6-aminopyrazin-2-yl)-N-(4-(4(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form I (Example 8) in a vacuum oven at ~40 °C with a N2 purge.
XRPD analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine monomesylate Form Π was conducted as described above and provided the diffraction pattern seen in Figure 5, with the peaks in the table below.
No. | Pos. [’2Th.J | Rel. Int. [%] |
1 | 17.2698 | 100 |
2 | 25.1384 | 67.84 |
3 | 20.4423 | 63.66 |
4 | 19.5732 | 62.11 |
5 | 18.5264 | 50.36 |
6 | 17.7884 | 50.07 |
7 | 21.6273 | 45.52 |
8 | 15.2397 | 44 |
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9 | 6.855 | 35.01 |
10 | 13.65 | 26 |
In one embodiment 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine monomesylate Form Π may be characterized by XRPD peaks 17.3 (17.2698), 25.1 (25.1384), 20.4 (20.4423), 19.6 (19.5732), and 18.5 (18.5264). In an additional embodiment 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine monomesylate Form Π may be characterized by XRPD peaks 17.3 (17.2698), 25.1 (25.1384), 20.4 (20.4423), and 19.6 (19.5732). In another embodiment 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazinl-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine monomesylate Form Π may be characterized by XRPD peaks 6.1,6 9,11.0, and 13.6.
NMR Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form Π, conducted as described above, provided the NMR spectrum seen in Figure 6.
Ή NMR (400 MHz, DMSO-d6) δ 9.61 (s, 1H),8.63 (s, lH),8.47(s, 1H), 8.19 (d, J = 1.2 Hz, 1H), 8.02 - 7.95 (m, 2H), 7.91 (s, 1H), 7.72 (d, J = 1.2 Hz, 1H), 7.13 - 7.06 (m, 2H), 4.85 - 4.72 (m, 4H), 4.53 - 4.45 (m, 1H), 4.30 - 2.75 (m, 10H), 2.34 (s, 3H).
A DSC analysis of6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form Π, conducted as described above, is seen in Figure Ί.
A TGA analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form Π, conducted as described above, is seen in Figure 8.
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Example 10 - 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amme succinate Form I
6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin8-amine Succinate Form I was prepared by first dissolving 1.6 mol. eq. of succinic acid in
THF, and then charging the acidic solution to 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine. The material was then stirred at room température with a magnetic stir bar ovemight.
XRPD analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine succinate Form I was conducted as described above and provided the diffraction pattern seen in Figure 9, with the peaks in the table below.
No. | Pos. [°2Th.] | Rel. Int. [%] |
1 | 16.5 | 100 |
2 | 24.5 | 38.64 |
3 | 17.7 | 9.27 |
4 | 28.4 | 8.68 |
5 | 21.8 | 7.57 |
6 | 8.0 | 6.53 |
7 | 23.1 | 4.59 |
8 | 12.1 | 4.38 |
9 | 8.3 | 3.78 |
10 | 27.1 | 3.65 |
In one embodiment 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-l15 yl)phenyl)imidazo[l ,2-a]pyrazin-8-amine Succinate Form I may be characterized by XRPD peaks 16.5,24.5,17.7,28.4, and 21.8. In another embodiment 6-(6-aminopyrazin-2-yl)-N(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form I may be characterized by XRPD peaks 16.5,24.5, 8.0 and 8.3.
129
NMR Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form I, conducted as described above, provided the NMR spectrum seen in Figure 10.
Ή NMR (400 MHz, DMSO-d6) δ 12.12 (s, 2H), 9.48 (s, IH), 8.59 (s, IH), 8.48 (s, IH), 8.12 (d, J = 1.1 Hz, IH), 7.97-7.86 (m,3H), 7.62 (d, J = 1.1 Hz, IH), 7.01 - 6.94 (m, 2H), 6.45 (s, 2H), 4.55 (t, J = 6.5 Hz, 2H), 4.46 (t, J = 6.1 Hz, 2H), 3.49 - 3.38 (m, IH), 3.13 (t, J = 4.9 Hz, 4H), 2.40 (s, 10H).
A DSC analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form I, conducted as described above, is seen in Figure 11.
A TGA analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form I, conducted as described above, is seen in Figure 12.
The process for preparing 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine succinate Form I was also repeated using IPA, Acetone, and 2-MeTHF as solvents.
Example 11 - 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine succinate Form II
6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin8-amine free base was charged with 10.0 parts 2-propanol, followed by rapid agitation, to form a slurry. A separate solution of succinic acid (0.43 parts, 1.6 mol eq.) in 2-propanol (15 parts) was prepared at ambient température and was added to the slurry. The resulting slurry was then agitated at ambient température for about 1 day. Another solution of succinic acid (0.09 parts, 0.3 mol eq.) in 2-propanol (3 parts) was added to the slurry and the resulting slurry was agitated at ambient température for about two days. An additional solution of succinic acid (0.27 parts, 1.0 mol eq.) in 2-propanol (8 parts) was prepared at
130 ambient température and added to the slurry and the resulting slurry was agitated for about 2 days. Then the content température was adjusted to 40°C and the slurry was agitated for about two hours. The content was then retumed to ambient température and agitated for about 16 hours. The resulting slurry was then filtered, rinsed with 2-propanol (7.0 parts), 5 and dried at 60°C.
XRPD analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine succinate Form Π was conducted as described above and provided the diffraction pattern seen in Figure 13, with the peaks in the table below.
No. | Pos. [°2Th.] | Rel. Int. [%] |
1 | 24.9821 | 100 |
2 | 16.3186 | 38.39 |
3 | 21.952 | 18.44 |
4 | 7.8958 | 17.62 |
5 | 7.5828 | 6.9 |
6 | 28.5998 | 6.52 |
7 | 11.3329 | 5.73 |
8 | 30.8568 | 5.48 |
9 | 28.0273 | 5.21 |
10 | 21.5026 | 4.73 |
In one embodiment 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form Π may be characterized by XRPD peaks 25.0 (24.9821), 16.3 (16.3186), 22.0 (21.952), 7.9 (7.8958), and 7.6 (7.5828). In a 15 further embodiment 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-l yl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form Π may be characterized by XRPD peaks 25.0 (24.9821), 16.3 (16.3186), 7.9 (7.8958), and 7.6 (7.5828).
131
NMR Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form Π, conducted as described above, provided the NMR spectrum seen in Figure 14.
'H NMR (400 MHz, DMSO-d6) δ 12.13 (s, 2H), 9.48 (s, 1H), 8.58 (s, 1H), 8.47z (s, 1H), 8.12 (d, J = 1.1 Hz, 1H), 7.97-7.86 (m, 3H), 7.62(d,J= 1.1 Hz, 1H), 7.02 - 6.94 (m, 2H), 6.45 (s, 2H), 4.55 (t, J = 6.5 Hz, 2H), 4.46 (t, J = 6.0 Hz, 2H), 3.44 (p, J = 6.3 Hz, 1H), 3.17 - 3.10 (m, 4H), 2.40 (s, 10H), 1.02 (d, J = 6.1 Hz, 2H).
A DSC analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form Π, conducted as described above, is seen in Figure 15.
A TGA analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form Π, conducted as described above, is seen in Figure 16.
Biological Examples
Example 12: High Throughput Syk Biochemical Assay
Syk activity was measured using KinEASE (Cisbio), a time-resolved fluorescence résonance energy transfer (TR-FRET) immunoassay. In this assay, Sykcatalyzes the phosporylation of a XL665-labeled peptide substrate. Europium conjugated phospho-tyrosine spécifie antibody binds the resulting phosphorylated peptide. Formation of phosphorylated peptide is quantified by TR-FRET with Europium as the donor and XL665 the acceptor in a 2-step endpoint assay. In brief, test compounds serially diluted in DMSO were delivered into Corning white, low volume, non-binding 384 well plates using the Echo 550 acoustic liquid dispenser (Labcyte®). Syk enzyme and substrates were dispensed into assay plates using a Multi-Flo (Bio-Tek Instruments). The standard 5 pL reaction mixture contained 20 μΜ ATP, 1 μΜ biotinylated peptide, 0.015 nM of Syk in reaction buffer (50
132 mM Hepes, pH 7.0, 0.02% NaN3, 0.1% BSA, 0.1 mM Orthovanadate, 5 mM MgCh, ImM DTT, 0.025% NP-40). After 30 minutes of incubation at room température, 5 pL of Stop and Detect Solution (1:200 Europium Cryptate labeled anti-phosphorylated peptide antibody solution and 125 nM strepavidin-XL665 Tracer in a 50mM Hepes pH 7.0 détection buffer containing sufficient EDTA) was added. The plate was then further incubated for 120 minutes at room température and read using an Envision 2103 Multilabeled reader (PerkinElmer) with excitation/emission/FRET émission at 340nm/615nm/665nm, respectively. Fluorescence intensifies at 615nm and 665nm émission wavelengths were expressed as a ratio (665nm/615nm). Percent inhibition was calculated as follows:
% Inhibition = 100 x (Ratio sampie - Ratio o% inhibiüon)/(Ratio ioo% inhibition - Ratio o% inhibition) where 0.1% DMSO (0% inhibition) was the négative control and 1 μΜ K252a (100% inhibition) was used as the positive control. Activity of the compounds of Examples 1-7 are provided in the following table, demonstrating the compounds are Syk inhibitors with IC50 below 50 nM.
Example No.: Compound Name | Syk IC50 (nM) |
Ex.-l : 6-(6-amino-5-methylpyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l -yl)phenyl)imidazo[l ,2-a]pyrazin-8-amine | 6.2 |
Ex.-2: 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine | 13.5 |
Ex.-3: (R)-(4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8yl)amino)phenyl)morpholin-2-yl)methanol | 13.3 |
Ex.-4: 6-(6-aminopyrazin-2-yl)-5-methyl-N-(4-(4-(oxetan-3yl)piperazin-l -yl)phenyl)imidazo[l ,2-a]pyrazin-8-amine | 44 |
Ex.-5: 2-(5-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8yl)amino)-2-(4-(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol | 12.2 |
Ex.-6: 2-((4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8yl)amino)phenyl)piperazin-l-yl)methyl)propane-l,3-diol_______________ | 14.5 |
Ex. -7: 2-(5 -((6-(6-amino-5 -methylpyrazin -2-yl )imi dazo [ 1,2-a]py razin8-yl)amino)-2-(4-(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol | 8.7 |
133
Example 13: 384-well HTBS Whole Blood CD63 Basophil Assay
Syk activity was assessed in relation to reduced activation of basophils as measured by the expression of CD63 in a human whole blood basophil cellular assay (25% blood). Basophil activation was measured in human whole blood using the Flow CAST kit (Buhlmann Laboratories AG, Baselstrasse, Switzerland) following the protocol provided by the manufacturer with minor modifications. Fresh human whole blood in heparin was collected and delivered same day (AllCells, Emeryville, CA). Whole blood samples were incubated with either DMSO (1% final) or serial diluted compounds in DMSO for 60 minutes at 37 °C. Basophils were activated using the anti-FceRI mAb and stained with antiCD63-FITC and anti-CCR3-PE for 20 minutes at 37 °C (per well: 50 pL of whole blood was mixed with 113 pL of stimulation buffer, 8.5 pL anti-FceRI mAb, 8.5 pL Ab stain CCR3-PE/CD63-FITC). Cells were centrifuged at 1000 x g for 18 minutes and 150 pL/well of supematant removed. Red blood cells were lysed and cells fixed by 2 rounds of cell lysing: resuspending cell pellets with 150 pL/well IX lysis buffer, incubating at room température for 10 minutes, and collecting cell pellets by centrifuging for 1200 rpms for 5 minutes. Cells were washed with 150 pL/well wash buffer twice, and resuspended in a final volume of 75 pL/well of wash buffer for either immédiate flow cytometery analysis or ovemight incubation at 4 °C followed by flow cytometry analysis. Degranulation (basophil activation) was detected by CD63 surface expression on CCR3 positive cells. The percent CD63 positive cells within the gated basophil population were determined and normalized to the DMSO (négative control) and control compound (positive control). Activity of the compounds of Examples 1-7 are provided in the following table, demonstrating the compounds are effective in reducing the activation of basophils, with ECso below 200 nM.
Example No.: Compound Name | CD63 ECso (nM) |
Ex.-l : 6-(6-amino-5-methylpyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine | 51 |
Ex.-2: 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo [ 1,2-a]py razin-8-amine | 80 |
Ex.-3 : (R)-(4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l ,2-a]pyrazin-8yl)amino)phenyl)morpholin-2-yl)methanol | 63 |
Ex.-4: 6-(6-aminopyrazin-2-yl)-5-methyl-N-(4-(4-(oxetan-3- | 157 |
134
yl)piperazin-l -yl)phenyl)imidazo[l ,2-a]pyrazin-8-amine | |
Ex.-5: 2-(5-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8yl)amino)-2-(4-(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol | 120 |
Ex.-6: 2-((4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8yl)amino)phenyl)piperazin-l-yl)methyl)propane-1,3-diol | 128 |
Ex.-7: 2-(5-((6-(6-amino-5-methylpyrazin-2-yl)imidazo[ 1,2-a]pyrazin8-yl)amino)-2-(4-(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol | 167 |
Example 14: Kinetic Solubility
The kinetic solubility of compounds in phosphate buffer at pH 7.4 was assessed. The compounds to be tested were dissolved in dimethylsulfoxide at a 10 mM concentration. Stock samples were diluted, 3 μ 1 with 297 μ 1 of the phosphate buffer at pH 7.4 (DulBecco’s phosphate buffered saline (Sigma-Aldrich D8662), overall molarity is 0.149M and pH 7.43). The samples were then incubated for 24 hours at 37 °C with shaking, the centrifuged and an aliquot taken and tested relative to a known standard concentration of 0.1 mM. The kinetic solubility of the compounds of Examples 1-7 are provided in the following table, demonstrating the compounds hâve kinetic solubility at pH 7.4 of greater than 90 μΜ.
Example No.: Compound Name | Solubility pH 7.4 (μΜ) |
Ex.-1: 6-(6-amino-5-methylpyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l -yl)phenyl)imidazo[l ,2-a]pyrazin-8-amine | 95 |
Ex.-2: 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine | 95 |
Ex.-3: (R)-(4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8- yl)amino)phenyl)morpholin-2-yl)methanol_________________________ | 91 |
Ex.-4: 6-(6-aminopyrazin-2-yl)-5-methyl-N-(4-(4-(oxetan-3yl)piperazin-l -yl)phenyl)imidazo[l ,2-a]pyrazin-8-amine_____________ | 100 |
Ex.-5: 2-(5-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8yl)amino)-2-(4-(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol_________ | 97 |
Ex.-6: 2-((4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8yl)amino)phenyl)piperazin-1 -yl )methy l)propane-1,3 -diol______________ | 99 |
Example 15: Human Hépatocyte Stability Assay
The human hematocyte stability of the compounds as predicted hépatocyte clearance in L/hr/kg was assessed. Compounds to be tested were diluted to 200 μΜ (4 μΐ of
135 mM DMSO stock into 196 μΐ ACNîHzO (50:50). Propranolol was used as a positive control, and buffer only without hépatocytes as 0% control. These were fiirther diluted 4 μΐ with 891 μΐ KHB buffer (InVitroGRO catalog number Z99074) to provide 2X dosing solution. To each well of 24 well plate, 250 μΐ of the 2X dosing solution was added to each 5 well with 250 μΐ of hépatocytes cells (1 x 106 viable cells/ml per well) or KHB for control samples to achieve a final compound concentration of 1 μΜ during incubation. The final solvent concentration was 0.01% DMSO and 0.25% ACN. The culture plate was placed on a rocker and incubated at 37 °C, 5% CO2. Samples were collected at time 0,1,3, and 6 hours. The loss of parent compound was determined using LC-MS methods against a standard curve. Activity of the compounds of Examples 1-7 are provided in the following table, showing hépatocyte clearance of about 0.12 L/hr/kg or less.
Example No.: Compound Name | Hheps CL (L/hr/kg) |
Ex.-l : 6-(6-amino-5-methylpyrazin-2-yl)-N-(4-(4-(oxetan-3yl)piperazin-l -yl)phenyl)imidazo[l ,2-a]pyrazin-8-amine | 0.12 |
Ex.-2: 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine | 0.055 |
Ex.-3: (R)-(4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l ,2-a]pyrazin-8yl)amino)phenyl)morpholin-2-yl)methanol | 0.09 |
Ex.-4: 6-(6-aminopyrazin-2-yl)-5-methyl-N-(4-(4-(oxetan-3yl)piperazin-l-yl)phenyl)imidazo[l ,2-a]pyrazin-8-amine | 0.08 |
Ex.-5: 2-(5-((6-(6-aminopyrazin-2-yl)imidazo[l ,2-a]pyrazin-8yl)amino)-2-(4-(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol | 0.07 |
Ex.-6: 2-((4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8- yl)amino)phenyl)piperazin-l-yl)methyl)propane-l,3-diol | 0.08 |
Ex.-7: 2-(5-((6-(6-amino-5-methylpyrazin-2-yl)imidazo[l,2-a]pyrazin- 8-yl)amino)-2-(4-(oxetan-3-yl)piperazin-l-yl)phenoxy)ethanol | 0.05 |
Example 16: Comparison to known Syk inhibitors
The assays of Examples 8-11 were used to compare the compounds as described herein with compounds known in the art. The data comparing the compounds of Examples 1 -7 to previously described compounds is provided in the following table. From these results, it is clear that compounds as described herein are désirable as Syk inhibitors, with improved Syk and CD63 activity relative to the known compounds, improved kinetic
136 solubility (at least about 9-fold more soluble) and hépatocyte clearance (at least about 2-fold less clearance). As such, the combination of improved Syk and CD63 inhibitory activity with improved kinetic solubility and clearance provides compounds that are expected to be effective at treating diseases as described herein with improved pharmacokinetic properties.
Compound Name | Syk ICso (nM) | CD63 ICso (nM) | Solubility pH 7.4 (μΜ) | Hheps CL (units) |
Ex.-1: 6-(6-amino-5-methylpyrazin2-yl)-N-(4-(4-(oxetan-3-yl)piperazin1 -yl)phenyl)imidazo[l ,2-a]pyrazin-8amine | 6.2 | 51 | 95 | 0.12 |
Ex.-2: 6-(6-aminopyrazin-2-yl)-N(4-(4-(oxetan-3 -yl)piperazin-1 yl)phenyl)imidazo[l,2-a]pyrazin-8amine | 13.5 | 80 | 95 | 0.055 |
Ex.-3: (R)-(4-(4-((6-(6aminopyrazin-2-yl)imidazo[l ,2a]pyrazin-8yl)amino)phenyl)morpholin-2yl)methanol | 13.3 | 63 | 91 | 0.09 |
Ex.-4: 6-(6-aminopyrazin-2-yl)-5methyl-N-(4-(4-(oxetan-3 yl)piperazin-lyl)phenyl)imidazo[l ,2-a]pyrazin-8amine | 44 | 157 | 100 | 0.08 |
Ex.-5: 2-(5-((6-(6-aminopyrazin-2yl)imidazo[l ,2-a]pyrazin-8yl)amino)-2-(4-(oxetan-3yl)piperazin-l -yl)phenoxy)ethanol | 12.2 | 120 | 97 | 0.07 |
Ex.-6: 2-((4-(4-((6-(6-aminopyrazin2-yl)imidazo[l ,2-a]pyrazin-8yl)amino)phenyl)piperazin-l yl)methy l)propane-1,3 -diol | 14.5 | 128 | 99 | 0.08 |
Ex.-7: 2-(5-((6-(6-amino-5methylpyrazin-2-yl)imidazo[l ,2a]pyrazin-8-yl)amino)-2-(4-(oxetan3-yl)piperazin-l -yl)phenoxy)ethanol | 8.7 | 167 | nd | 0.05 |
Known compounc | s: | |||
6-(5-aminopyridin-3-yl)-N-(4morpholinophenyl)imidazo[l ,2a]pyrazin-8-amine | 31 | 101 | 5 | 0.68 |
6-(3 -aminophenyl)-N-(3,4- | 188 | 809 | 3 | 0.24 |
137
dimethoxyphenyl)imidazo[l ,2a]pyrazin-8-amine | ||||
6-(5-amino-6-methylpyridin-3-yl)-N(4-morpholinophenyl)imidazo[l,2a]pyrazin-8-amine | 16 | 250 | 5 | 0.80 |
6-(6-aminopyridin-3-yl)-N-(3,4d i methoxy pheny l )imi dazo [ 1,2a]pyrazin-8-amine | 53 | 734 | 10 | 0.90 |
Throughout this spécification, varions patents, patent applications and other types of publications (e.g., journal articles) are referenced. The disclosure of ail patents, patent applications, and publications cited herein are hereby incorporated by reference in their entirety for ail purposes.
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WO 2015/100217
PCT/US2014/071842
Claims (46)
- What is claimed:1. A compound having the structure of Formula I:Formula I or a pharmaceutically acceptable sak, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereofi wherein:R1 is selected from the group consisting of, wherein * indicates the carbon atom of the indicaîed phenyl ring ofFormula I to which R1 is attached;R2 is H or 2-hydroxyethoxyl;R3 is H or methyl; andR4 is H or methyl.139WO 2015/100217PCT/US2014/071842
- 2. A compound according to Claim 1, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixtureof stereoisomers or tautomer thereof, wherein R1 is
- 3. A compound according to Claim 1, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, wherein R1 isHO
- 4. A compound according to Claim 1, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixtureOHof stereoisomers or tautomer thereof, wherein R1 is
- 5. A compound according to Claim 1, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixtureOHof stereoisomers or tautomer thereof, wherein R1 is140WO 2015/100217 PCT/US2014/071S42
- 6. A compound according to any of Claims 1, 2, 3,4, or 5, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, wherein R2 is 2-hydroxyethoxyl.
- 7. A compound according to any of Claims 1,2, 3,4, or 5, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, wherein R2 is H.
- 8. A compound according to any of Claims 1, 2, 3,4, 5, 6, or 7, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, wherein R3 is methyl.
- 9. A compound according to any of Claims 1, 2, 3,4, 5, 6, or 7, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, wherein R3 is H.
- 10. A compound according to any of Claims 1,2, 3,4, 5,6, 7, 8, or 9, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, wherein R4 is methyl.
- 11. A compound according to any of Claims 1, 2, 3, 4, 5, 6, 7, 8, or 9, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, wherein R4 is H.141WO 2015/100217PCT/US2014/071842
- 12. A compound according to any of Claims 1, 2, 3,4,5,6, 7 8, 9, 10, or 11, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, wherein R2 is H and R4 is H.
- 13. A compound according to any of Claims 1, 2, 3,4,5, 6, 7 8, 9, 10, or 11, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, wherein R2 is H and R4 is methyl.
- 14. The compound according to any of Claims 1, 2, 3,4, 5, 6, 7 8,9, 10, 11, 12, or 13, selected from the group consisting of:2-(5-((6-(6-amino-5-methylpyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)amino)-2-(4-(oxetan-3yl)piperazin-1 -yl)phenoxy)ethanol;6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8amine;2-((4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazin-8-yl)amino)phenyl)piperazin-lyl)methyl)propane-1,3-diol;2-(5-((6-(6-aminopyrazin-2-yl)imidazo[ 1,2-a]pyrazin-8-yl)amino)-2-(4-(oxetan-3-yl)piperazin-1 yl)phenoxy)ethanol ;(R)-(4-(4-((6-(6-aminopyrazin-2-yl)imidazo[l,2-a]pyrazm-8-yl)amino)phenyl)morpholin-2yl)methanol;6-(6-aminopyrazin-2-yl)-5-methyl-N-(4-(4-(oxetan-3-yl)piperazin-l-yi)phenyl)imidazo[l,2a]pyrazin-8-amine; and6-(6-amino-5-methylpyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2a]pyrazin-8-amine;or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal,142WO 2015/100217 PCT/US2014/071842 pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof.
- 15. A pharmaceutical composition comprising a compound of any of Claims 1, 2, 3,4, 5, 6, 7, 8, 9, 10, 11, 12, 13, or 14, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, and at least one pharmaceutically acceptable vehicle.
- 16. A compound of any of Claims 1, 2, 3,4, 5, 6, 7, 8, 9,10, 11, 12, 13, or 14, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, or a pharmaceutical composition of Claim 15 for use in the treatment of a disease or condition selected from the group consisting of an inflammatory disorder, an allergie disorder, an autoimmune disease, and a cancer in a subject.
- 17. The compound or pharmaceutical composition of Claim 16, wherein the disease or condition is a cancer selected from the group consisting of a hématologie malignancy and a solid tumor.
- 18. The compound or pharmaceutical composition of claim 16, wherein the disease or condition is a hématologie malignancy selected from the group consisting of lymphoma, multiple myeloma, or leukemia.
- 19. The compound or pharmaceutical composition of Claim 18, wherein the disease or condition is selected from the group consisting of small lymphocytic lymphoma, non-Hodgkin’s lymphoma, indolent non-Hodgkin’s lymphoma, refractory iNHL, mande cell lymphoma, follicular lymphoma, lymphoplasmacytic lymphoma, marginal zone lymphoma, immunoblastic large cell lymphoma, lymphoblastic lymphoma, Splenic marginal zone B-cell lymphoma (+/villous lymphocytes), Nodal marginal zone lymphoma (+/- monocytoid B-cells), Extranodal143WO 2015/100217 PCT/US2014/071842 marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue type, cutaneous T-cell lymphoma, extranodal T-cell lymphoma, anaplastic large cell lymphoma, angioimmunoblastic Tcell lymphoma, mycosis fungoides, B-cell lymphoma, diffuse large B-cell lymphoma, Médiastinal large B-cell lymphoma, Intravascular large B-cell lymphoma, Primary effusion lymphoma, small non-cleaved cell lymphoma, Burkitt’s lymphoma, multiple myeloma, plasmacytoma, acute lymphocytic leukemia, T-cell acute lymphoblastic leukemia, B-cell acute lymphoblastic leukemia, B-cell prolymphocytic leukemia, acute myeloid leukemia, chronic lymphocytic leukemia, juvénile myelomonocytic leukemia, minimal residual disease, hairy cell leukemia, primary myelofibrosis, secondary myelofïbrosis, chronic myeloid leukemia, myelodysplastic syndrome, myeloproliferative disease, and Waldestrom’s macroglobulinemia.
- 20. The compound or pharmaceutical composition of claim 17, wherein the disease or condition is a solid tumor, wherein the solid tumor is from a cancer selected from the group consisting of pancreatic cancer, urological cancer, bladder cancer, colorectal cancer, colon cancer, breast cancer, prostate cancer, rénal cancer, hepatocellular cancer, thyroid cancer, gall bladder cancer, lung cancer (e.g. non-small cell lung cancer, small-cell lung cancer), ovarian cancer, cervical cancer, gastric cancer, endométrial cancer, esophageal cancer, head and neck cancer, melanoma, neuroendocrine cancer, CNS cancer, brain tumors (e.g., glioma, anaplastic oligodendroglioma, adult glioblastoma multiforme, and adult anaplastic astrocytoma), bone cancer, soft tissue sarcoma, retinoblastomas, neuroblastomas, peritoneal effusions, malignant pleural effusions, mesotheliomas, Wilms tumors, trophoblastic neoplasms, hemangiopericytomas, Kaposi's sarcomas, myxoid carcinoma, round cell carcinoma, squamous cell carcinomas, esophageal squamous cell carcinomas, oral carcinomas, cancers of the adrenal cortex, and ACTH-producing tumors.
- 21. The compound or pharmaceutical composition of Claim 16, wherein the disease or condition is selected from the group consisting of systemic lupus erythematosus, myestenia gravis, Goodpasture's syndrome, glomerulonephritis, hemorrhage, pulmonary hemorrhage, atherosclerosis, rheumatoid arthritis, psoriatic arthritis, monoarticular arthritis, osteoarthritis, gouty arthritis, spondylitis, Behçet disease, autoimmune thyroiditis, Reynaud’s syndrome, acute144WO 2015/100217 PCT/US2014/071842 disseminated encephalomyelitis, chronic idiopathic thrombocytopénie purpura, multiple sclerosis, Sjogren’s syndrome, autoimmune hemolytic anémia, tissue graft rejection, hyperacute rejection of transplanted organs, allograft rejection, graft-versus-host disease, diseases involving leukocyte diapedesis, disease States due to leukocyte dyscrasia and metastasis, granulocyte transfusion-associated syndromes, cytokine-induced toxicity, scleroderma, vasculitis, asthma, psoriasis, chronic inflammatory bowel disease, ulcerative colitis, Crohn’s disease, necrotizing enterocolitis, irritable bowel syndrome, dermatomyositis, Addison’s disease, Parkinson’s disease, Alzheimer’s disease, diabètes, type I diabètes mellitus, sepsis, septic shock, endotoxic shock, gram négative sepsis, gram positive sepsis, and toxic shock syndrome, multiple organ injury syndrome secondary to septicemia, trauma, hypovolémie shock, allergie conjunctivitis, vemal conjunctivitis, and thyroid-associated ophthalmopathy, éosinophilie granuloma, eczema, chronic bronchitis, acute respiratory distress syndrome, allergie rhinitis, coryza, hay fever, bronchial asthma, silicosis, pulmonary sarcoidosis, pleurisy, alveolitis, emphysema, pneumonia, bacterial pneumonia, bronchiectasis, and pulmonary oxygen toxicity, reperfusion injury of the myocardium, brain, or extremities, thermal injury, cystic fibrosis, keloid formation or scar tissue formation, fever and myalgias due to infection, and brain or spinal cord injury due to minor trauma, diseases involving leukocyte diapedesis, acute hypersensitivity, delayed hypersensitivity, urticaria, food allergies, skin sunbum, inflammatory pelvic disease, urethritis, uveitis, sinusitis, pneumonitis, encephalitis, meningitis, myocarditis, nephritis, osteomyelitis, myositis, hepatitis, alcoholic hepatitis, gastritis, enteritis, contact dermatitis, atopie dermatitis, gingivitis, appendicitis, pancreatitis, cholocystitis, polycythemia vera, essential thrombocythemia, and polycystic kidney disease.
- 22. The compound or pharmaceutical composition of Claim 16, wherein the disease or condition is selected from the group consisting of systemic lupus erythematosus, myestenia gravis, rheumatoid arthritis, acute disseminated encephalomyelitis, idiopathic thrombocytopénie purpura, multiple sclerosis, Sjoegren’s syndrome, psoriasis, autoimmune hemolytic anémia, asthma, ulcerative colitis, Crohn’s disease, irritable bowel disease, and chronic obstructive pulmonary disease.145WO 2015/100217 PCT/US2014/071842
- 23. The compound or pharmaceutical composition of Claim 16, wherein the disease or condition is selected from the group consisting of asthma, rheumatoid arthritis, multiple sclerosis, chronic obstructive pulmonary disease, and systemic lupus erythematosus.
- 24. The compound or pharmaceutical composition of any one of daims 16-23, wherein the subject is human.
- 25. The compound or pharmaceutical composition of any one of Claims 16-24, wherein the compound, or a pharmaceutically acceptable sait or co-crystal thereof, is administered intravenously, intramuscularly, parenterally, nasally or orally.
- 26. The compound or pharmaceutical composition of Claim 25, wherein the compound, or a pharmaceutically acceptable sait or co-crystal thereof, is administered QD orally.
- 27. The compound or pharmaceutical composition of Claim 25, wherein the compound, or a pharmaceutically acceptable sait or co-crystal thereof, is administered BID orally.
- 28. A compound of any of Claims 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, or 14, or a pharmaceutically acceptable sait or co-crystal thereof, or a pharmaceutical composition of Claim 15 for use in therapy.
- 29. Use of a compound of any of Claims 1, 2, 3,4, 5, 6, 7, 8, 9, 10, 11, 12, 13, or 14, or a pharmaceutically acceptable sait or co-crystal thereof, in the manufacture of a médicament for the treatment of a disease or condition of any one of Claims 16, 17, 18, 19, 20,21, 22, 23, 24, 25, 26 or 27.146WO 2015/100217 PCT/US2014/071842
- 30. A compound of Claim 1, a pharmaceutical composition of Claim 15, a compound or pharmaceutical composition of any one of Claims 16, 17, 18, 19, 20,21, 22, 23,24, 25,26 or 27, a compound for use of claim 28, or a use of claim 29, wherein the compound is 6-(6aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-l-yl)phenyl)imidazo[l,2-a]pyrazin-8-amine or a pharmaceutically acceptable sait or co-crystal thereof.
- 31. A compound ofany of Claims 1,2, 3,4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, or 28 wherein the pharmaceutically acceptable sait or co-crystal is a mesylate sait or co-crystal.
- 32. A compound of any of Claims 1, 2, 3,4, 5,6, 7, 8, 9, 10, 11, 12, 13, 14, or 28 wherein the pharmaceutically acceptable sait or co-crystal is a succinate sait or co-crystal.
- 33. A compound of the formula:, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers, or tautomer thereof.
- 34. A compound of the formula:147WO 2015/100217PCT/US2014/071842, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers, or tautomer thereof.
- 35. A compound of the formula:, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers, or tautomer thereof.
- 36. A compound of the formula:148WO 2015/100217 PCT/US2014/071842 , or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers, or tautomer thereof.
- 37. A compound of the formula., or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers, or tautomer thereof.
- 38. A compound of the formula:, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers, or tautomer thereof.
- 39. A compound of the formula:149WO 2015/100217PCT/US2014/071842, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers, or tautomer thereof.
- 40. A pharmaceutical composition comprising a therapeutically effective amount of a compound of the formula:, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, and at least one pharmaceutically acceptable vehicle.
- 41. A pharmaceutical composition comprising a therapeutically effective amount of a compound of the formula:150WO 2015/100217PCT/US2014/071842, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, and at least one pharmaceutically acceptable vehicle.
- 42. A pharmaceutical composition comprising a therapeutically effective amount of a compound of the formula:, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, and at least one pharmaceutically acceptable vehicle.
- 43. A pharmaceutical composition comprising a therapeutically effective amount of a compound of the formula:151WO 2015/100217PCT/US2014/071842, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, and at least one pharmaceutically acceptable vehicle.
- 44. A pharmaceutical composition comprising a therapeutically effective amount of a compound of the formula:, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, and at least one pharmaceutically acceptable vehicle.
- 45. A pharmaceutical composition comprising a therapeutically effective amount of a compound of the formula:152WO 2015/100217PCT/US2014/071842, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, and at least one pharmaceutically acceptable vehicle.
- 46. A pharmaceutical composition comprising a therapeutically effective amount of a compound of the formula:, or a pharmaceutically acceptable sait, pharmaceutically acceptable co-crystal, pharmaceutically acceptable ester, stereoisomer, mixture of stereoisomers or tautomer thereof, and at least one pharmaceutically acceptable vehicle.153ABSTRACTThe présent disclosure relates to compounds that are Syk inhibitors and to their use in the treatment of various disease States, including cancer and inflammatory conditions. In particular embodiments, the structure of the compounds is given by Formula I:Formula I wherein R1, R2, R3, and R4 are as described herein. The présent disclosure further provides pharmaceutical compositions that include a compound of Formula I, or pharmaceutically acceptable salts or co-crystals thereof, and methods of using these compounds and compositions to treat conditions mediated by Syk.1/16FIG. 1XRPD Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyI)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form II ntensity (counts)1000 800 600 400 200 -Y----------------1----------------1----------------1----------------1----------------1----------------!----------------1----------------1--------:-------1 I | I | l 12Theta (°)2/16FIG. 2NMR Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yI)piperazîn-lyl)phenyl)imidazo|l,2-a|pyrazin-8-amine Mono MSA Sait Form IPROTON 01340320Y30-280-260-240Y20-200-1SÜ ; 160 L140 i-120100I ‘80 •60 r— , . · ; < | ! f · 1 ' ’ ' ' ·.,·4 13 12 11 10 9 8 7 6 5 fl (ppm) • r......... 1-----!--1--4 3 2 1 0 1 23/16FIG. 3DSC Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form I4/16FIG. 4TGA Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form I5/16FIG. 5XRPD Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form IIIntensity (counts)1000 800 600 400200 02Theta (°)6/16FIG. 6NMR Analysis of 6-(6-ammopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form IIPROTON 01 |i-400I i^300 i tQ50-200H150-100A 13 12 11 10 9 8 7 6 S 4 3 2 fl (ppm)0 -1 -27/16FIG. 7DSC Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyI)imidazo[l,2-a]pyrazin-8-amme Mono MSA Sait Form II8/16FIG. 8TGA Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Mono MSA Sait Form II9/16FIG. 9XRPD Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo|l,2-a]pyrazin-8-amine Succinate Form IIntensity (counts)10/16FIG. 10NMR Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazofl,2-a]pyrazin-8-amine Succinate Form IPROTON^Ol650-600550-500Î-4S0-40011/16FIG. 11DSC Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyI)imidazo[l,2-a]pyrazin-8-amine Succinate Form IHeat Flow (W/g)12/16FIG. 12TGA Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form I13/16FIG. 13XRPD Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form ΠIntensity (counts)14/16FIG. 14NMR Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form ΠPROTOM.01 [-'Λ0 l-4S015/16FIG. 15DSC Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form Π0115.40°C3.633J/g187.27’C ,102.4J/g/?\122.31°CCO Φ189.11°C-642080 100 120 140 160 180 200Température (°C)16/16FIG. 16TGA Analysis of 6-(6-aminopyrazin-2-yl)-N-(4-(4-(oxetan-3-yl)piperazin-lyl)phenyl)imidazo[l,2-a]pyrazin-8-amine Succinate Form Π
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