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KR101481788B1 - New Antigen for Detecting Rejection Response Including Miniature Pig Liver Protein According to Developmental Stages and the Kit for Detecting Rejection Response Includign the Same - Google Patents

New Antigen for Detecting Rejection Response Including Miniature Pig Liver Protein According to Developmental Stages and the Kit for Detecting Rejection Response Includign the Same Download PDF

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KR101481788B1
KR101481788B1 KR20140020661A KR20140020661A KR101481788B1 KR 101481788 B1 KR101481788 B1 KR 101481788B1 KR 20140020661 A KR20140020661 A KR 20140020661A KR 20140020661 A KR20140020661 A KR 20140020661A KR 101481788 B1 KR101481788 B1 KR 101481788B1
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이순신
성제경
황승용
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순천향대학교 산학협력단
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Abstract

본 발명은 돼지와 인간의 이종기관이식에서 거부반응 여부를 확인할 수 있는 단백질 항원과 이를 포함하는 이종기관이식의 거부반응 여부 검출용 키트에 관한 것으로, 보다 상세하게는, 돼지의 발달 단계별 번역과정에 차이를 나타내는 단백질 항원을 포함하는 이종기관이식의 거부반응 여부 검출을 위한 항원 및 이의 검출용 키트에 관한 것이다.
본 발명에서, 우리는 2-DE 및 MALDI-TOF를 이용하여 간의 발달 단계에 대한 단백질 조절(4일 된 신생아, 19일 된 새끼돼지 및 14개월 된 어른 미니어쳐 피그)을 보고하였다. 3가지 다른 단계의 이미지로부터, 다르게 조절되는 총 8개의 스팟이 확인되었고, 5개의 스팟이 MALDI-TOF MS로 확인되었다. 본 발명에 나타난 데이터는 미니어쳐 피그 간의 발달단계에 관련된 중요한 방향을 제공하며, 이는 이후의 간에 대한 프로테옴 분석에 도움이 될 것이며, 이종기관이식에 대한 장애물들의 이해를 증진시킬 것이다. 이를 이용하면, 발달단계별로 다르게 조절되는 신규한 항원으로서, 이종기관이식에서 거부반응을 검출하는 데 유용하게 사용될 수 있을 것이다.
The present invention relates to a protein antigen capable of confirming rejection in heterologous organ transplantation between a pig and a human, and a kit for detecting rejection of heterologous organ transplantation including the protein antigen, and more particularly, To a kit for detecting an antigen and a kit for detecting the rejection of heterologous organ transplantation including a protein antigen showing a difference.
In the present invention, we reported protein control (4-day old newborn, 19-day old piglet and 14-month old adult miniature pig) for the developmental stage of the liver using 2-DE and MALDI-TOF. From the images of the three different steps, a total of 8 different spots were identified, and 5 spots were identified by MALDI-TOF MS. The data presented in this invention provide an important direction for the developmental stages between miniature pigs, which will aid in subsequent proteome analysis of the liver and enhance understanding of obstacles to heterologous organ transplantation. This may be useful for detecting rejection in heterologous organ transplantation as a novel antigen that is regulated differently by developmental stage.

Description

돼지 간의 발달단계별 차이를 나타내는 단백질을 포함하는 이종기관이식 거부반응 검출을 위한 신규한 항원 및 이를 포함하는 검출용 키트{New Antigen for Detecting Rejection Response Including Miniature Pig Liver Protein According to Developmental Stages and the Kit for Detecting Rejection Response Includign the Same}TECHNICAL FIELD [0001] The present invention relates to a novel antigens for detection of heterologous organ transplant rejection reaction including a protein showing developmental stage differences between pigs, and a kit for detecting the same. Rejection Response Includign the Same}

본 발명은 돼지와 인간의 이종기관이식에서 거부반응 여부를 확인할 수 있는 단백질 항원과 이를 포함하는 이종기관이식의 거부반응 여부 검출용 키트에 관한 것으로, 보다 상세하게는, 돼지의 발달 단계별 번역과정에 차이를 나타내는 단백질 항원을 포함하는 이종기관이식의 거부반응 여부 검출을 위한 항원 및 이의 검출용 키트에 관한 것이다. The present invention relates to a protein antigen capable of confirming rejection in heterologous organ transplantation between a pig and a human, and a kit for detecting rejection of heterologous organ transplantation including the protein antigen, and more particularly, To a kit for detecting an antigen and a kit for detecting the rejection of heterologous organ transplantation including a protein antigen showing a difference.

인코딩된 단백질의 생물학적 역할을 설명하기 위해서는 유전자 발현 조절 및 발현 범위에 대한 전반적인 이해가 중요하다. 유전자 발현 배치(configuration)의 변화는 조절 기작, 세포 기능 및 생화학적 경로에 관한 증거를 제공할 수 있다. 따라서, 연구 관심은 세포 게놈에 의해 인코딩된 기능적 단백질의 동정 및 특징과 조직으로서 독립적인지 통합적인지에 중점을 두고 있다[2]. 단백질-기초 방식은 번역 및 번역 후 수정을 특징으로 하기 때문에 매우 중요하다. 방법들 중에서, 프로테옴 수준의 2D-전기영동(2DE)과 MALDITOF MS(matrix-assisted laser desorption/ ionization-time of flight mass spectrometry) 모니터링은 매우 유망한 툴로 인식되고 있다. 인간 공여자 조직이 점차 부족하기 때문에, 인간의 이식을 위해 동물 조직 특히, 인간이 아닌 영장류의 장기의 사용 가능성에 대해 관심이 증가하고 있다[3,4]. 현재, 대체로서 인간외의 영장류 조직을 사용하는 것은 위험하며, 그들의 조직이 너무 작아서, 인간에서 적절한 기능을 하지 못한다[4]. 따라서, 현재, 대부분의 연구는 장기 이식을 위해 인간외의 영장류 대신 돼지를 사용하는 것에 중점을 두고 있다[5]. 특히, 근친 교배한 미니어처 피그는 성공적인 이종 기관이식을 목적으로 지난 25년간 선택적 육종 프로그램에 의해 도입되었다[4]. 그러나, 어떤 이종기관이식 노력에 의해서도, 종간 장벽은 인상적이며, 잠재적으로 위험한 장벽이다[4]. 미니어쳐 피그와 관련된 이종기관이식의 장벽은 다음을 포함한다: 1) 인간과 돼지사이의 면역학적 장벽으로 인한 거부 반응, 2) 돼지로부터 인간의 병원균 감염의 가능성, 3) 종간의 생리학적 및 해부학적 비호환성, 및 4) 환자 반응에 대한 사회학적 동의. 이종기관이식이 현실화된다면, 이러한 이슈를 극복하는 것이 중요하다. 돼지 조직을 인간에게 이식하기 위해, 우리는 각 조직에서 발현되는 단백질의 특성을 알아야 한다. 미니어쳐 피그의 조직이 인간의 것과 생리적으로 해부학적으로 유사함에도 불구하고, 일반적인 조건에서 조직의 단백질 발현은 알려져 있지 않다. 출생 후의 발달 단계에 따른 발현 단백질의 특징에 관해서는 거의 알려져 있지 않다. 돼지 간의 프로테옴은 대부분 연구되지 않았다. 현재, 설치류와 인간에서 얻어 낸 것과 같이 동일한 수준의 정보를 얻기 위해, 우리는 간에 초점을 두었다. 4일된 미니어쳐 피그(신생아), 19일된 미니어쳐 피그(새끼돼지) 및 14개월된 미니어쳐 피그(어른)가 발달단계를 대표하는 것으로서 이용되었다. 각 동물의 간은 2DE로 분석되었다. 이들 세 단계 중 다양한 단백질 발현 스팟이 선택되었고, 단백질들은 MALDI-TOF MS로 확인되었다. 불행히도, 돼지에서 다양한 단백질 데이터베이스는 인간과 설치류의 것보다 잘 확립되어 있지 않기 때문에, 이들 단백질들을 동정하는 것은 어렵다. 본 발명은 출생 후 발달 단계에 따라 미니어쳐 피그 간의 다르게 발현된 단백질 프로파일에 대한 관한 최초의 발명이다. 이는 이종기관이식에서 거부반응을 검출하는데 유용하게 이용될 수 있을 것이다. To explain the biological role of the encoded protein, an overall understanding of gene expression regulation and expression range is important. Changes in gene expression configuration can provide evidence of regulatory mechanisms, cell function, and biochemical pathways. Therefore, the research focuses on the identification and characterization of functional proteins encoded by cellular genomes and whether they are independent or integrated [2]. The protein-based approach is very important because it features translation and post-translational modifications. Among the methods, proteome level 2D-electrophoresis (2DE) and MALDITOF MS (matrix-assisted laser desorption / ionization-time of flight mass spectrometry) monitoring have been recognized as very promising tools. Because of the gradual lack of human donor organization, there is increasing interest in the use of organs of animal tissues, especially non-human primates, for human transplantation [3,4]. Currently, it is dangerous to use non-human primate tissue as a substitute, and their organization is too small to function properly in humans [4]. Thus, currently, most studies focus on using pigs instead of nonhuman primates for organ transplantation [5]. In particular, inbreeding miniature pigs have been introduced by selective breeding programs for the past 25 years for successful heterologous transplantation [4]. However, by any heterogeneous organ transplantation effort, interspecific barriers are an impressive and potentially dangerous barrier [4]. Barriers of heterologous organ transplantation involving miniature pigs include: 1) rejection due to immunological barriers between humans and pigs, 2) the possibility of human pathogen infection from pigs, 3) physiological and anatomical interspecies Incompatibility, and 4) sociological agreement on patient response. If heterogeneous organ transplantation is realized, it is important to overcome these issues. To transplant pig tissues into humans, we need to know the nature of the proteins expressed in each tissue. Although miniature pig tissues are similar physiologically anatomically to humans, protein expression of tissues under normal conditions is not known. Little is known about the characteristics of the expressed proteins in the developmental stage after birth. Most of the proteome among pigs was not studied. Now, in order to get the same level of information as rodents and humans have, we have focused on the liver. Four-day miniature pigs (newborns), 19-day miniature pigs and 14-month-old miniature pigs (adults) were used to represent the developmental stage. The liver of each animal was analyzed by 2DE. Various protein expression spots were selected among these three steps, and proteins were identified by MALDI-TOF MS. Unfortunately, it is difficult to identify these proteins because the diverse protein databases in pigs are not well established in humans and rodents. The present invention is the first invention relating to a differentially expressed protein profile among miniature pigs according to the postnatal developmental stage. This may be useful for detecting rejection in heterologous organ transplantation.

상기와 같은 종래기술의 문제점을 해결하기 위하여, 본 발명은 이종기관이식에 있어서, 돼지와 인간의 이종기관이식에서 거부반응 여부를 확인할 수 있는 단백질 항원과 이를 포함하는 검출용 키트를 제공하는 것을 목적으로 한다. DISCLOSURE Technical Problem In order to solve the problems of the prior art as described above, it is an object of the present invention to provide a protein antigen capable of confirming rejection in heterologous transplantation of pigs and humans, and a detection kit comprising the same, .

상기와 같은 목적을 달성하기 위해 본 발명은 발달 단계별 돼지 간에 있는 단백질에 있어서, 알데히드 디하이드로게네이즈 미토콘드리아 전구체, 혈청 알부민, 케라틴, 타입 II 사이토스켈레탈-8 단백질, 증식 관련 단백질 2G4 또는 람다-크리스탈린 중 어느 하나를 포함하는 이종기관이식 검출용 항원을 제공한다. In order to achieve the above-mentioned object, the present invention provides a method for detecting a protein in the developmental stage pig, comprising the steps of: reacting an aldehyde dehydrogenase mitochondrial precursor, serum albumin, keratin, type II cytoskeletal-8 protein, The present invention provides antigens for heterologous organ transplantation detection comprising any one of the above-mentioned antigens.

또한, 본 발명은 상기 항원을 포함하는 이종기관이식의 거부반응 검출용 키트를 제공한다. In addition, the present invention provides a kit for detecting rejection of heterologous organ transplantation comprising the antigen.

이식을 위해 인간 조직의 기여자가 부족하기 때문에, 이종기관이식의 다양한 연구 또는 인간 조직 대신 동물 조직의 사용이 수행되어 왔다. 돼지의 조직은 더 안전하며, 인간이 아닌 영장류의 것보다 이종기관이식을 위해 더 적합한 크기인 것으로 생각되어 왔다. 인간과 설치류에서 이종기관이식이 잘 알려진 반면, 돼지에 대해서는 이종기관이식에 대한 분작학적 프로파일이 거의 연구된 바 없음에도 불구하고, 다른 종간 및 발달 단계에 대한 단백질 발현과 번역 후 조절 수준의 이해가 매우 중요하다. Because of the lack of human tissue donors for transplantation, various studies of xenotransplantation or use of animal tissues instead of human tissue have been performed. Pig tissue has been considered safer and more suited for heterologous organ transplantation than nonhuman primates. Although heterologous organ transplantation is well known in humans and rodents, there is little understanding of the spatial expression of protein expression and post-translational regulation in other species and developmental stages, very important.

본 발명에서, 우리는 2-DE 및 MALDI-TOF를 이용하여 간의 발달 단계에 대한 단백질 조절(4일 된 신생아, 19일 된 새끼돼지 및 14개월 된 어른 미니어쳐 피그)을 보고하였다. 3가지 다른 단계의 이미지로부터, 다르게 조절되는 총 8개의 스팟이 확인되었고, 5개의 스팟이 MALDI-TOF MS로 확인되었다. 본 발명에 나타난 데이터는 미니어쳐 피그 간의 발달단계에 관련된 중요한 방향을 제공하며, 이는 이후의 간에 대한 프로테옴 분석에 도움이 될 것이며, 이종기관이식에 대한 장애물들의 이해를 증진시킬 것이다. 이를 이용하면, 발달단계별로 다르게 조절되는 신규한 항원으로서, 이종기관이식에서 거부반응을 검출하는 데 유용하게 사용될 수 있을 것이다. In the present invention, we reported protein control (4-day old newborn, 19-day old piglet and 14-month old adult miniature pig) for the developmental stage of the liver using 2-DE and MALDI-TOF. From the images of the three different steps, a total of 8 different spots were identified, and 5 spots were identified by MALDI-TOF MS. The data presented in this invention provide an important direction for the developmental stages between miniature pigs, which will aid in subsequent proteome analysis of the liver and enhance understanding of obstacles to heterologous organ transplantation. This may be useful for detecting rejection in heterologous organ transplantation as a novel antigen that is regulated differently by developmental stage.

도 1은 발달단계에 따른 4일, 19일 및 14개월 된 미니어쳐 피그 간의 2 DE 겔을 나타낸 것이며, 이는 쿠마시 블루 염색으로 가시화되었다. 1 mg 단백질 샘플이 pH3-10 비 선형 IPG strip (24 cm)에 분리되었고, 이후, 2차원으로 8-18% 구배 SDS-PAGE gel로 분리되었다. 단백질들은 Coomassie brilliant blue G-250로 탐지되었고, ImageMasterTM 2D Platinum Software version 5.0를 이용하여 비교되었다; A: 4일 미니어쳐 피그(신생아)의 2DE 겔, B: 19일 미니어쳐 피그의 2DE 겔, C: 14개월 미니어쳐 피그의 2DE 겔. 검은 원은 4일 미니어쳐 신생아 피그, 19일 미니어쳐 새끼돼지 피그, 14개월된 미니어쳐 어른 피그간에 13가지 다르게 발현되는 단백질 스팟을 나타낸다.
도 2는 발달 단계에 따른 췌장의 대체 스팟의 2DE 이미지이다. 원은 다르게 발현되는 단백질 스팟을 나타내며, 다른 3단계의 발현 패턴은 단순 선 그래프로 표시되었다.
Figure 1 shows the 2 DE gels between miniature pigs at 4, 19 and 14 months after development, which was visualized by Coomassie blue staining. A 1 mg protein sample was separated on a pH 3-10 nonlinear IPG strip (24 cm) and then separated into 8-18% gradient SDS-PAGE gel in two dimensions. Proteins were detected with Coomassie brilliant blue G-250 and compared using ImageMasterTM 2D Platinum Software version 5.0; A: 4 day miniature pig (newborn) 2DE gel, B: 19 day miniature pig 2DE gel, C: 14 month miniature pig 2DE gel. The black circle represents 13 differently expressed protein spots between the 4-day miniature neonatal pig, 19-day miniature pig pig, and 14-month-old miniature adult pig.
Figure 2 is a 2DE image of a replacement spot of the pancreas according to developmental stages. The circles represent differently expressed protein spots, and the expression patterns of the other three steps are represented by simple line graphs.

이하, 실시예를 통하여 본 발명을 상세히 설명하나, 이들이 발명의 내용을 제한하는 것은 아니다.
Hereinafter, the present invention will be described in detail with reference to examples, but the present invention is not limited thereto.

< < 실시예Example 1 : 실험 동물 >  1: Experimental animals>

미니어처 피그는 서울대의 동물자원 개발센터(Center for Animal Resource Development)의 공기 오염 없는 시설에서 사육되었다. 상술한 바와 같이 다른 나이과 발달 단계를 가지는 3마리의 돼지가 사용되었다. 근주마취(Intramuscular anesthesia)는 매번 아프고, 고통스러운 과정을 통해 2 mL 케타민(ketamine) HCl (50 mg/mL/kg), 1 mL 자일라진(xylazin) (2.3 mg/mL/kg) 및 1 mL 아트로핀 설페이트(Atropine sulfate) (0.5 mg/mL/ 10 kg)의 혼합액을 사용하여 진행되었다. 각각 돼지의 복부는 면도하여 폴리비닐피롤리돈-아이오다인(polyvinylpyrrolidone-iodine)으로 소독하였다. 동물들은 접착 묶음으로 외과 평판에 고정되었다. 중앙 개복술(median laparotomy)이 수행되었다. 동물들의 간은 무균상태에서 잘라내어져서, 실험실에서 이식되는 동안, 액화 질산염 탱크에 보관되었다. 이러한 과정들은 대학 규칙에 따라 서울대 동물실험윤리위원회에 의해 검토되었다.
Miniature pigs were raised in an air pollution free facility at SNU 's Center for Animal Resource Development. Three pigs of different ages and stages of development were used as described above. Intramuscular anesthesia is performed through a painful and painful procedure every time with 2 mL of ketamine HCl (50 mg / mL / kg), 1 mL xylazin (2.3 mg / mL / kg) and 1 mL of atropine And atropine sulfate (0.5 mg / mL / 10 kg). Each pig's abdomen was shaved and disinfected with polyvinylpyrrolidone-iodine. The animals were fixed on the surgical plate with a glue bundle. Median laparotomy was performed. The animals' liver was cut out in sterile conditions and stored in a liquefied nitrate tank during transplantation in the laboratory. These procedures were reviewed by the SNU Animal Experimental Ethics Committee according to university regulations.

< < 실시예Example 2 : 2 2: 2 DEDE 샘플 준비 > Sample Preparation>

간은 실험 후 완전히 제거되어, 사용될 때까지 -70℃에서 보관되었다. 냉동된 조직(1 g)은 액체 질소하에서 절구공이를 이용하여 미세 가루로 분쇄되었다. 단백질 샘플을 수집하여 900 μL 용해 버퍼(7 M urea, 2M thiourea, 2% w/v CHAPS, 2% Pharmalyte pH 3-10, 100mMDTE)에서 균질화하였다. 샘플들은 1시간 동안 4℃에서 50,000 rpm 로 원심분리되었다. 상등액은 조심스럽게 제거되고, -70℃에서 즉시 냉동되었다.
The liver was completely removed after the experiment and stored at -70 ° C until used. Frozen tissue (1 g) was pulverized into fine powder using a mortar in liquid nitrogen. Protein samples were collected and homogenized in 900 μL lysis buffer (7 M urea, 2 M thiourea, 2% w / v CHAPS, 2% Pharmalyte pH 3-10, 100 mM DTE). Samples were centrifuged at 50,000 rpm at 4 &lt; 0 &gt; C for 1 hour. The supernatant was carefully removed and immediately frozen at -70 ° C.

< < 실시예Example 3 : 2 3: 2 DEDE >  >

2D-폴리아크릴아마이드 겔 전기영동(PAGE)이 상술한 바에 따라 수행되었다[6]. 1mg의 전체 단백질을 포함하는 부분 표본은 용해 버퍼로 희석되어 전체 부피가 450μL이 되었다. 샘플들은 적어도 12시간 동안 재수화되는 240 mm, 고정화, 비선형 pH 3-10 IPG Drystrip (Amersham Pharmacia Biotech, NJ)로 처리되었다. 재수화(rehydration) 후, 스트립은 약 90,000 Vh (EttanTMIPGphorTM II IEF systems; Amersham Pharmacia Biotech)을 얻기 위해 3시간 동안 30V, 1시간 동안 100 V, 1 시간 동안 200 V, 1시간 동안 500 V, 1시간 동안 1000 V 및 최종적으로 11시간 동안 8,000 V에서 포커싱되었다. 일단 등전점 전기영동이 끝난 후, 스트립은 20% v/v 글리세롤, 2% w/v SDS 및 0.01% w/v full term for BPB with 10 mM 트리뷰틸 포스파인(Tributyl phosphine, (Flukachemie, Switzerland))를 포함하는 6M 요소(urea)에서 평형화되었다. SDS-PAGE는 EttanDalt system (Amersham Pharmacia, NJ)을 이용하여 축적 겔 없이 8-18% 분리 겔을 이용하여 수행되었다. 2차원 전기영동은 20℃에서 3 W/gel로 밤새 수행되었다. 겔은 쿠마쉬 G-250 (Bio-Rad Laboratories, Hercules, USA)로 염색되었다.
2D-polyacrylamide gel electrophoresis (PAGE) was performed as described above [6]. Partial samples containing 1 mg of total protein were diluted in lysis buffer to a total volume of 450 μL. Samples were treated with 240 mM immobilized, nonlinear pH 3-10 IPG Drystrip (Amersham Pharmacia Biotech, NJ) rehydrated for at least 12 hours. After rehydration, the strip is about 90,000 Vh (Ettan TM IPGphor TM II IEF systems; Amersham Pharmacia Biotech) was focused at 30 V for 3 hours, 100 V for 1 hour, 200 V for 1 hour, 500 V for 1 hour, 1000 V for 1 hour and finally 8,000 V for 11 hours. Once the isoelectric point electrophoresis is complete, the strips are incubated with 20% v / v glycerol, 2% w / v SDS and 0.01% w / v full term for BPB with 10 mM Tributyl phosphine (Flukachemie, Switzerland) Lt; RTI ID = 0.0 &gt; (Urea). &Lt; / RTI &gt; SDS-PAGE was performed using 8-18% separation gel without accumulation gel using an EttanDalt system (Amersham Pharmacia, NJ). Two-dimensional electrophoresis was performed overnight at 3 W / gel at 20 ° C. The gel was stained with Coomass G-250 (Bio-Rad Laboratories, Hercules, USA).

< < 실시예Example 4 : 단백질 시각화 및 이미지 분석 >  4: Protein visualization and image analysis>

겔은 상술한 바와 같이 쿠마시 G-250 (Bio-Rad)로 염색되었다[7]. 염색된 겔은 GS 800 포토미터(Bio-Rad)를 이용하여 스캔되었고, ImageMasterTM 2D Platinum Software version 5.0 (GeneBio, Geneva, Switzerland)를 이용하여 분석되었다. 디지털화된 2DE 겔 이미지는 매칭 방식으로 비교되었다. 그룹들 중 다르게 발현되는 스팟들은(>3-fold 및 <1/3-fold)이 분석되고, 설명되었다.
The gel was stained with Coomassie G-250 (Bio-Rad) as described above [7]. The stained gels were scanned using a GS 800 photometer (Bio-Rad) and analyzed using ImageMaster (TM) 2D Platinum Software version 5.0 (GeneBio, Geneva, Switzerland). The digitized 2DE gel images were compared in a matching fashion. Different spots (> 3-fold and <1/3-fold) of the groups were analyzed and described.

< 실시예 5 : Example 5: InIn -- gelcome digestiondigestion >  >

스팟은 상술한 바에 따라(Gorg et al., 2000), 50 mM 탄산수소암모늄 pH 8.0에서 12.5 ng/μL 트립신(Promega, USA)을 이용하여 작은 조각으로 잘려졌다. MALDI-TOF MS 분석을 위해, 트립신 펩티드가 POROS 50 R2 column (Applied BioSystems, USA)에 집중되었다. 컬럼을 70% 아세토나이트릴(can)로 5% FA, 100% can 및 5% FA로 여러 번 세척한 후에 샘플들은 POROS 50 R2 컬럼에 로딩되어 5% FA로 세척되었다. 샘플들은 10 mg/mL α-시아노-4-하이드록시-시아믹 애시드(cinnamic acid, (Sigma-Aldrich, USA))로 구성된 2 μL of 매트릭스 용액으로 희석시키고, MALDI 샘플 플레이트에 떨어뜨렸다[8].
Spots were cut into small pieces using 12.5 ng / μL trypsin (Promega, USA) at 50 mM ammonium bicarbonate pH 8.0 as described above (Gorg et al., 2000). For MALDI-TOF MS analysis, trypsin peptides were concentrated on a POROS 50 R2 column (Applied BioSystems, USA). After washing the column several times with 5% FA, 100% can and 5% FA with 70% acetonitrile, the samples were loaded onto a POROS 50 R2 column and washed with 5% FA. Samples were diluted with 2 μL of matrix solution consisting of 10 mg / mL α-cyano-4-hydroxy-cyanic acid (cinnamic acid, (Sigma-Aldrich, USA)) and dropped onto MALDI sample plates ].

< < 실시예Example 6 :  6: MALDIMALDI -- TOFTOF 단백질 확인 > Protein Identification>

MALDI-TOF MS는 337 nm 질소 레이저를 가진 Voyager DE-PRO 스펙트로미터(Applied Biosystems)을 이용하여 수행되었다. 기구는 가속화 전압 20 kV, 양이온 반사 모드, 전압 그리드 74.5%, 가이드 와이어 전압 0% 및 지연 시간 120 ns로 작동되었다. 스펙트럼은 트립신 자기 분해 산물(842.51 [M+H] 및 2211.11 [M+H])을 이용하고, Mascot (Matrix Science, UK)를 이용한 Swiss-Prot 확인 단백질 및 NCBI 데이터베이스를 조사하여, 내적으로 측정되었다. Monoisotopic peaks [MH+]가 선택되었고, 모든 다른 조사는 50 ppm mass tolerance로 분석되었다.
MALDI-TOF MS was performed using a Voyager DE-PRO spectrometer (Applied Biosystems) with a 337 nm nitrogen laser. The instrument was operated with an accelerating voltage of 20 kV, a cation reflection mode, a voltage grid of 74.5%, a guide wire voltage of 0% and a delay time of 120 ns. The spectra were internally measured by examining the Swiss-Prot confirmed protein and NCBI database using tryptic auto-degradation products (842.51 [M + H] and 2211.11 [M + H]) and using Mascot . Monoisotopic peaks [MH +] were selected, and all other studies were analyzed with 50 ppm mass tolerance.

<  < ResultsResults > >

다르게 발현되는 간 단백질 프로파일은 나이에 따라 확인되었다. 간 단백질이 추출되어 2D-PAGE로 분석되었다. 2D 겔이 쿠마시 블루 염색으로 시각화된 후, 2DE는 독립적으로 매치된 샘플 3쌍에 대해 각각 3번 반복되었다(도 1). 각 샘플에 대해, 분석을 위해 가장 최상의 도 1 해상도를 갖는 3 겔이 선택되었다. 스팟 강도 분석이 측정되었고, 결과 데이터 세트는 Image masterTM software (Geneva Bioinformatics, Switzerland)로 확인되었다. 탐지된 399 단백질 스팟들 중에서, 8개의 다른 스팟들이 확인되었다. 3배 이상 증가되거나, 1/3이하로 감소된 단백질 스팟이 선택되었다. 선택된 스팟은 겔로부터 잘려나가서, 트립신으로 in-gel digestion 되고, MALDI-TOF MS로 펩티드 핑거프린팅이 되었다. 펩티드 질량 데이터는 Mascot으로 확인되었다. 이러한 방식으로, 돼지들 사이에 다르게 발현되는 8개 스팟이 확인되었다. 5개 스팟은 http://www.ebi.ac.uk/ego에서 단백질 기능 조사로 확인될 수 있다(표 1).
The differentially expressed liver protein profiles were identified by age. Liver protein was extracted and analyzed by 2D-PAGE. After the 2D gel was visualized in Coomassie blue staining, 2DE was repeated 3 times each for 3 pairs of independently matched samples (Fig. 1). For each sample, 3 gels with the best resolution of 1 were selected for analysis. Spot intensity analysis was measured and the resulting data set was confirmed by Image masterTM software (Geneva Bioinformatics, Switzerland). Of the 399 protein spots detected, 8 different spots were identified. Protein spots were selected that were increased by more than 3-fold or decreased by less than 1/3. Selected spots were cut from the gel, digested in-gel with trypsin, and subjected to peptide fingerprinting with MALDI-TOF MS. Peptide mass data was confirmed by Mascot. In this way, eight spots that were differentially expressed between pigs were identified. Five spots can be identified by protein function studies at http://www.ebi.ac.uk/ego (Table 1).

선택된 스팟 강도의 증가 및 감소는 신생아 미니어쳐 피그에서 어른 미니어쳐 피그까지 3가지 겔 사이에서 탐지되었다(도 2). 알데히드 디하이드로게네이즈 미토콘드리아 전구체의 발현 수준(스팟 1번)은 증가되는 것으로 변화하지 않았다. 혈청 알부민의 발현 수준(스팟 2번)과 람다-크리스탈린 호모로그(스팟 7번)은 감소조절되었다. 스팟 5번이 유사한 스팟 강도 패턴을 나타냄에도 불구하고, 정확한 확인이 수행될 수 없었다. 케라틴, 타입 II 사이토스켈레탈-3 단백질의 발현 수준은 증가 조절되었다. 확산 관련 단백질 2G4 발현은 증가조절되었다. 스팟 4번과 8번이 유사한 강도 패턴을 나타냄에도 불구하고, 정확한 확인이 수행될 수는 없었다. Increases and decreases in selected spot intensities were detected between the three gels from neonatal miniature pigs to adult miniature pigs (Figure 2). The expression level of the aldehyde dehydrogenase mitochondrial precursor (spot # 1) did not change to increase. Serum albumin expression levels (spot 2) and lambda-cristalline homolog (spot 7) were decreased. Although Spot 5 represents a similar spot intensity pattern, accurate identification could not be performed. The expression levels of keratin, type II cytoskeletal-3 protein were increased and regulated. Diffusion-related protein 2G4 expression was upregulated. Even though spots 4 and 8 exhibited similar intensity patterns, exact confirmation could not be performed.

본 발명은 최초로 발달 단계에 따라 프로테옴 분석을 이용한 미니어쳐 피그에서의 간의 단백질 발현을 밝힌 것이다. 돼지의 전체 간에 대한 프로테옴을 분석한 연구는 거의 없었다. 간에서 발현된 단백질에 대한 포괄적인 이해는 생물학적 정보를 제공할 수 있다. 등전점 pH 3-10 및 10-100 kDa의 Mr을 갖는 약 400개의 단백질이 탐지되었다. 399 스팟 중, 8개의 단백질 스팟이 그룹들 중 현저하게 변화되었으며, 5개의 단백질이 확인되었다. The present invention first revealed the expression of liver protein in miniature pigs using proteomic analysis according to the developmental stage. Few studies have analyzed the proteome of whole pigs. A comprehensive understanding of proteins expressed in the liver can provide biological information. About 400 proteins with an isoelectric point pH of 3-10 and a Mr of 10-100 kDa were detected. Of the 399 spots, 8 protein spots were significantly changed among the groups and 5 proteins were identified.

알데히드 디하이드로게네이즈 미토콘드리아 전구체는 알데히드 디하이드로게네이즈 패밀리에 속하며, 에탄올의 사용과 관련이 있다[9]. Aldehyde dehydrogenase The mitochondrial precursor belongs to the aldehyde dihydrogenase family and is associated with the use of ethanol [9].

혈청 알부민은 플라즈마의 주요 단백질이며, 물의 Ca2+, Na+, K+, 지방산, 호르몬, 빌리루빈(bilirubin) 및 약에 대해 우수한 결합 능력을 갖는다. 그 주요 기능은 혈액의 콜로이드 삼투압 조절이다[10]. Serum albumin is the main protein of plasma and has good binding capacity for Ca2 +, Na +, K +, fatty acids, hormones, bilirubin and drugs in water. Its main function is colloid osmotic control of blood [10].

케라틴, 타입 II 사이토스켈레탈-8 단백질은 가로무늬근의 코스타머(costameres)에서 수축기관을 디스트로핀에 결합시키도록 돕고, 방광, 간, exocervix 및 식도에서 발현된다[11]. Keratin, type II, is a protein expressed in the bladder, liver, exocervix and esophagus [11], which helps to bind the contractile organs to the dystrophin in the costameres of the lateral striatum.

증식 관련 단백질 2G4는 ERBB3-조절 신호전달 경로에서 중요한 역할을 할 수 있으며, 성장 조절에 관련되는 것 같다. 이는 안드로겐 수용체의 억제 보체로서 활용되며, ERBB3 ligandneuregulin-1/heregulin (HRG)에 의해 조절된다. 이는 일부 E2F1-조절 프로모터의 전사를 방해하며, 아마도 히스톤 아세틸라아제(HAT) 활성을 사용하는 것으로 보인다. 이는 RNA에 결합하고, 28S, 18S and 5.8S 성숙 RNAs, 여러 rRNA 전구체 및 U3 small nucleolar RNA과 관여된다[12]. rRNA processing의 중간 및 마지막 단계의 조절에 관여할 수 있다. 리보솜 어셈블리와 특정 바이러스 IRESs의 andmediatescap-독립적 번역과정에도 관여할 수 있다. The proliferation-related protein 2G4 can play an important role in the ERBB3-regulated signaling pathway and seems to be involved in growth regulation. It is used as an inhibitor of the androgen receptor and is regulated by ERBB3 ligandneuregulin-1 / heregulin (HRG). This interferes with the transcription of some E2F1-regulated promoters, presumably using histone acetylase (HAT) activity. It binds to RNA and is involved in 28S, 18S and 5.8S mature RNAs, several rRNA precursors, and U3 small nucleolar RNA [12]. can be involved in the regulation of the intermediate and final stages of rRNA processing. It can also be involved in the mediated and independent translation process of ribosome assemblies and certain viral IRESs.

람다-크리스탈린(Lamda-cristallin homolog)은 3-하이드록시아실-CoA 디하이드로게나아제 패밀리에 속하며, 렌즈 구성요소이다. 그러나, 간 및 신장에서 많이 발현되는 것으로 보고되었으며, 간 암의 발암유전자와 관련되어 있을 수 있다[13]. 증식-관련 단백질 2G4를 제외한 5개의 확인된 단백질 중, 단백질들은 간에서 발현이 되었다. 그러나, 혈청 알부민 전구체를 제외한 다른 종의 상동관계를 이용하여 확인하였다.Lamda-cristallin homolog belongs to the 3-hydroxyacyl-CoA dihydrogenase family and is a lens component. However, it has been reported to be highly expressed in liver and kidney, and may be associated with carcinogenesis of liver cancer [13]. Of the five identified proteins except for the proliferation-associated protein 2G4, the proteins were expressed in the liver. However, it was confirmed by using the homology of other species except the serum albumin precursor.

Chen et al.과 Moller et al.도 돼지 데이터 베이스 정보의 부족으로 인해, 사람, 소, 생쥐, 쥐 상동관계를 사용하였다[14,15]. 이종기관이식의 프로테옴 분석은 타겟 단백질의 조사를 위해서나, 종양 조직을 동물에 이식한 후, 단백질 발현의 경향을 조사하기 위해 사용되어 왔다[16,17]. 항암 약제는 단백질 발현 수준에서 인간의 종양 조직을 동물로 이식한 후 사용되어 왔으며, 항암 악제의 효능을 명확히 하기 위해, 종양 이식된 조직 그룹과 비처리된 조직 그룹간 단백질 발현의 수정을 비교하였다. 지금까지, 이종기관이식에 대한 발달 단계에 단백질 발현의 특징이 연구된 바 없었다. 이종기관이식에 대해, 돼지들은 인간 외의 영장류보다 더 잠재적 가치가 있는 것으로 생각된다. 그러나, 이러한 잠재력에 대한 방해요인은 인간과 쥐에 비해 부족한 데이터베이스로 인해 다양한 조직의 단백질 보완의 맵핑의 부족이었다. 현재, 인간과 생쥐에 대해 각각 5만건 이상 및 2만 5천건 데이터베이스 목록이 있는 반면, 돼지에 대해서는 단지 1072 목록만 MSDB 데이터베이스에서 가능하다[1]. 또한, 우리는 상업적인 항체의 부족으로 인해, 2DE 및 MALDI-TOF에 의해 확인된 프로테옴(스팟)을 확인할 수 없었다. 단백질 보충의 수정에 대한 지식은 이종기관이식을 방해하는 면역학적 장벽, 미생물학적 차이 및 이종에 의해 야기되는 문제점들을 극복하기 위한 가치있는 정보를 제공할 수 있을 것이다[3, 18]. 데이터 베이스 부족으로 인해, 미니어쳐 피그의 간에 대해 데이터가 제한적임에도 불구하고, 본 발명에서 제공되는 데이터는 미니어쳐 피그의 발달단계 별 간에 대해 처음으로 제공되는 것이며, 이후의 연구에 대한 추가적인 프로테옴 분석의 중요한 방향을 제시할 수 있을 것이다. Chen et al. And Moller et al. Also used human, bovine, mouse, and mouse homology relationships due to lack of pig database information [14,15]. Proteomic analysis of heterologous organ transplants has been used to investigate the trend of protein expression either for investigation of target proteins or after transplantation of tumor tissue into animals [16,17]. Anticancer drugs have been used after transplantation of human tumor tissues into animals at protein expression levels, and to clarify the efficacy of anticancer agents, we compared the modifications of protein expression between tumor-grafted and untreated tissue groups. Until now, no features of protein expression have been studied at the developmental stage of heterologous organ transplantation. For heterogeneous organ transplants, pigs are thought to have more potential value than nonhuman primates. However, the impediment to this potential was the lack of mapping of protein complementation of various tissues due to the scarcity of databases compared to humans and mice. Currently, there are more than 50,000 databases and more than 25,000 databases for humans and mice, respectively, while only 1072 databases for pigs are available in the MSDB database [1]. In addition, we were unable to identify proteomes (spots) identified by 2DE and MALDI-TOF due to the lack of commercial antibodies. Knowledge of modification of protein supplements may provide valuable information to overcome immunological barriers, microbiological differences, and problems caused by heterogeneity, which interfere with heterogeneous organ transplantation [3, 18]. Despite the limited data on the miniature pig liver due to the lack of databases, the data provided in the present invention is provided for the first time in the developmental stages of miniature pigs, and the important direction of additional proteomic analysis .

상기에 제시된 실시예는 예시적인 것으로 이 분야에서 통상의 지식을 가지는 자는 본 발명의 기술적 사상을 벗어나지 않는 범위에서 제시된 실시예에 대한 다양한 변형 및 수정 고안을 만들 수 있을 것이다. 이러한 변형 및 수정 고안에 의하여 본 발명의 범위는 제한되지 않는다.
The embodiments presented above are illustrative and those skilled in the art will be able to make various modifications and alterations to the disclosed embodiments without departing from the technical spirit of the present invention. The scope of the present invention is not limited by these variations and modifications.

< References > <References>

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Claims (2)

발달 단계별 돼지 간에서 발현되는 단백질에 있어서, 알데히드 디하이드로게네이즈 미토콘드리아 전구체(Aldehyde dehydrogenase mitochondrial precursor), 혈청 알부민(Serum Albumin), 케라틴, 타입 II 사이토스켈레탈-8 단백질(Keratin, Type II cytoskeletal-8), 증식 관련 단백질 2G4(Proliferation-associated protein 2G4) 또는 람다-크리스탈린(Lamda-cristallin homolog) 중 어느 하나를 포함하는 이종기관이식 검출용 항원.The proteins expressed in the developmental stage pig liver include aldehyde dehydrogenase mitochondrial precursor, serum albumin, keratin, type II cytoskeletal-8 protein (Keratin, ), A proliferation-associated protein 2G4, or a lambda-cristallin homolog. 제1항의 항원을 포함하는 이종기관이식의 거부반응 검출용 키트. A kit for detecting rejection of heterologous organ transplantation comprising the antigen of claim 1.
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이종이식을 위한 미니돼지 유전자 발현 연구 (한양대학교 박사학위논문(2008.08.)) *

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