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EP2099904A4 - Procédé permettant de générer de nouvelles protéines stabilisées - Google Patents

Procédé permettant de générer de nouvelles protéines stabilisées

Info

Publication number
EP2099904A4
EP2099904A4 EP08705479A EP08705479A EP2099904A4 EP 2099904 A4 EP2099904 A4 EP 2099904A4 EP 08705479 A EP08705479 A EP 08705479A EP 08705479 A EP08705479 A EP 08705479A EP 2099904 A4 EP2099904 A4 EP 2099904A4
Authority
EP
European Patent Office
Prior art keywords
generating new
stabilized proteins
new stabilized
proteins
generating
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP08705479A
Other languages
German (de)
English (en)
Other versions
EP2099904A2 (fr
Inventor
Frances H Arnold
Yougen Li
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
California Institute of Technology
Original Assignee
California Institute of Technology
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by California Institute of Technology filed Critical California Institute of Technology
Publication of EP2099904A2 publication Critical patent/EP2099904A2/fr
Publication of EP2099904A4 publication Critical patent/EP2099904A4/fr
Withdrawn legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/0004—Oxidoreductases (1.)
    • C12N9/0071—Oxidoreductases (1.) acting on paired donors with incorporation of molecular oxygen (1.14)
    • C12N9/0077—Oxidoreductases (1.) acting on paired donors with incorporation of molecular oxygen (1.14) with a reduced iron-sulfur protein as one donor (1.14.15)
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B15/00—ICT specially adapted for analysing two-dimensional or three-dimensional molecular structures, e.g. structural or functional relations or structure alignment
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B15/00—ICT specially adapted for analysing two-dimensional or three-dimensional molecular structures, e.g. structural or functional relations or structure alignment
    • G16B15/20—Protein or domain folding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Wood Science & Technology (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Genetics & Genomics (AREA)
  • Medicinal Chemistry (AREA)
  • Microbiology (AREA)
  • Biomedical Technology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Peptides Or Proteins (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Enzymes And Modification Thereof (AREA)
EP08705479A 2007-01-05 2008-01-05 Procédé permettant de générer de nouvelles protéines stabilisées Withdrawn EP2099904A4 (fr)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US87896207P 2007-01-05 2007-01-05
US89912007P 2007-02-02 2007-02-02
US90022907P 2007-02-08 2007-02-08
US91852807P 2007-03-16 2007-03-16
PCT/US2008/000135 WO2008085900A2 (fr) 2007-01-05 2008-01-05 Procédé permettant de générer de nouvelles protéines stabilisées

Publications (2)

Publication Number Publication Date
EP2099904A2 EP2099904A2 (fr) 2009-09-16
EP2099904A4 true EP2099904A4 (fr) 2010-04-07

Family

ID=39609266

Family Applications (1)

Application Number Title Priority Date Filing Date
EP08705479A Withdrawn EP2099904A4 (fr) 2007-01-05 2008-01-05 Procédé permettant de générer de nouvelles protéines stabilisées

Country Status (4)

Country Link
US (1) US20120171693A1 (fr)
EP (1) EP2099904A4 (fr)
JP (1) JP2010515683A (fr)
WO (1) WO2008085900A2 (fr)

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1639091B1 (fr) 2003-06-17 2012-12-05 California University Of Technology Hydroxylation d'alcane régio- et énantio-sélective avec du cytochrome p450 modifié
US8252559B2 (en) 2006-08-04 2012-08-28 The California Institute Of Technology Methods and systems for selective fluorination of organic molecules
WO2008016709A2 (fr) 2006-08-04 2008-02-07 California Institute Of Technology Procédés et systèmes de fluoration sélective des molécules organiques
US8802401B2 (en) 2007-06-18 2014-08-12 The California Institute Of Technology Methods and compositions for preparation of selectively protected carbohydrates
US9322007B2 (en) 2011-07-22 2016-04-26 The California Institute Of Technology Stable fungal Cel6 enzyme variants
KR101401468B1 (ko) * 2011-11-15 2014-05-30 전남대학교산학협력단 박테리아 시토크롬 ｐ450을 이용한 아토르바스타틴으로부터 대사산물의 신규한 생산방법 및 이를 위한 조성물
EP3218833A2 (fr) * 2014-11-14 2017-09-20 D.E. Shaw Research, LLC Suppression des interactions entre des particules liées
LU92906B1 (en) 2015-12-14 2017-06-20 Luxembourg Inst Science & Tech List Method for enzymatically modifying the tri-dimensional structure of a protein
CN107145765A (zh) * 2017-03-14 2017-09-08 浙江工业大学 一种用于蛋白质结构预测的轨迹多尺度分析方法
CN108384770B (zh) * 2018-03-01 2019-11-22 江南大学 一种降低环糊精对普鲁兰酶抑制作用的方法
CN112941056B (zh) * 2021-02-24 2022-11-18 长春大学 一种淀粉普鲁兰酶突变体及其应用

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005017106A2 (fr) * 2003-06-17 2005-02-24 California Institute Of Technology Bibliotheques d'enzymes cytochromes p450 optimisees et enzymes p450 optimisees

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP3712255B2 (ja) * 1997-12-08 2005-11-02 カリフォルニア・インスティチュート・オブ・テクノロジー ポリヌクレオチドおよびポリペプチド配列を生成するための方法
US20020045175A1 (en) * 2000-05-23 2002-04-18 Zhen-Gang Wang Gene recombination and hybrid protein development

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005017106A2 (fr) * 2003-06-17 2005-02-24 California Institute Of Technology Bibliotheques d'enzymes cytochromes p450 optimisees et enzymes p450 optimisees

Non-Patent Citations (4)

* Cited by examiner, † Cited by third party
Title
LANDWEHR ET AL: "Diversification of Catalytic Function in a Synthetic Family of Chimeric Cytochrome P450s", CHEMISTRY AND BIOLOGY, CURRENT BIOLOGY, LONDON, GB, vol. 14, no. 3, 23 March 2007 (2007-03-23), pages 269 - 278, XP005929291, ISSN: 1074-5521 *
MEYER MICHELLE M ET AL: "Library analysis of SCHEMA-guided protein recombination.", PROTEIN SCIENCE, vol. 12, no. 8, August 2003 (2003-08-01), pages 1686 - 1693, XP002502197, ISSN: 0961-8368 *
OTEY CHRISTOPHER R ET AL: "Structure-guided recombination creates an artificial family of cytochromes P450", PLOS BIOLOGY, vol. 4, no. 5, May 2006 (2006-05-01), pages 789 - 798, XP002502196 *
OTEY ET AL.: "Functional evolution and structural conservation in chimeric cytochromes P450: Calibrating a structure-guidied approach"", CHEMISTRY & BIOLOGY (CAMBRIDGE), vol. 11, no. 3, March 2004 (2004-03-01), pages 309 - 318, XP002570369, ISSN: 1074-5521 *

Also Published As

Publication number Publication date
US20120171693A1 (en) 2012-07-05
EP2099904A2 (fr) 2009-09-16
JP2010515683A (ja) 2010-05-13
WO2008085900A2 (fr) 2008-07-17
WO2008085900A3 (fr) 2008-11-06

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