EP0804573A1 - Methods and compositions for modulating morphogenic protein expression - Google Patents
Methods and compositions for modulating morphogenic protein expressionInfo
- Publication number
- EP0804573A1 EP0804573A1 EP95923784A EP95923784A EP0804573A1 EP 0804573 A1 EP0804573 A1 EP 0804573A1 EP 95923784 A EP95923784 A EP 95923784A EP 95923784 A EP95923784 A EP 95923784A EP 0804573 A1 EP0804573 A1 EP 0804573A1
- Authority
- EP
- European Patent Office
- Prior art keywords
- seq
- cell
- sequence
- vector
- reporter gene
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Withdrawn
Links
- 230000014509 gene expression Effects 0.000 title claims abstract description 77
- 238000000034 method Methods 0.000 title claims abstract description 72
- 108090000623 proteins and genes Proteins 0.000 title claims abstract description 58
- 102000004169 proteins and genes Human genes 0.000 title claims abstract description 33
- 239000000203 mixture Substances 0.000 title abstract description 14
- 230000000921 morphogenic effect Effects 0.000 title description 9
- 108700008625 Reporter Genes Proteins 0.000 claims abstract description 86
- 150000001875 compounds Chemical class 0.000 claims abstract description 73
- 108091028043 Nucleic acid sequence Proteins 0.000 claims abstract description 41
- 102100022544 Bone morphogenetic protein 7 Human genes 0.000 claims abstract description 8
- 210000004027 cell Anatomy 0.000 claims description 146
- 239000013598 vector Substances 0.000 claims description 59
- 230000027455 binding Effects 0.000 claims description 56
- 108020004414 DNA Proteins 0.000 claims description 55
- 108091026890 Coding region Proteins 0.000 claims description 30
- 101100444898 Mus musculus Egr1 gene Proteins 0.000 claims description 20
- 150000007523 nucleic acids Chemical class 0.000 claims description 19
- 102000039446 nucleic acids Human genes 0.000 claims description 18
- 108020004707 nucleic acids Proteins 0.000 claims description 18
- 210000003734 kidney Anatomy 0.000 claims description 16
- 238000004519 manufacturing process Methods 0.000 claims description 13
- 238000001727 in vivo Methods 0.000 claims description 12
- 239000002773 nucleotide Substances 0.000 claims description 8
- 125000003729 nucleotide group Chemical group 0.000 claims description 8
- 150000003431 steroids Chemical class 0.000 claims description 8
- 108090000765 processed proteins & peptides Proteins 0.000 claims description 7
- 230000007423 decrease Effects 0.000 claims description 6
- 230000004568 DNA-binding Effects 0.000 claims description 4
- 230000001413 cellular effect Effects 0.000 claims description 3
- 108020004511 Recombinant DNA Proteins 0.000 claims description 2
- 230000000747 cardiac effect Effects 0.000 claims description 2
- 210000002919 epithelial cell Anatomy 0.000 claims description 2
- 210000002064 heart cell Anatomy 0.000 claims description 2
- 101150055936 OP1 gene Proteins 0.000 claims 1
- 210000002449 bone cell Anatomy 0.000 claims 1
- 210000005229 liver cell Anatomy 0.000 claims 1
- 210000005265 lung cell Anatomy 0.000 claims 1
- 210000002569 neuron Anatomy 0.000 claims 1
- 108010049870 Bone Morphogenetic Protein 7 Proteins 0.000 abstract description 190
- 238000012216 screening Methods 0.000 abstract description 14
- 101710167839 Morphogenetic protein Proteins 0.000 abstract 1
- 102000008131 Bone Morphogenetic Protein 7 Human genes 0.000 description 176
- 108020004999 messenger RNA Proteins 0.000 description 51
- 241000282414 Homo sapiens Species 0.000 description 43
- 241001529936 Murinae Species 0.000 description 34
- 238000011144 upstream manufacturing Methods 0.000 description 33
- 210000001519 tissue Anatomy 0.000 description 32
- 239000012634 fragment Substances 0.000 description 29
- 235000018102 proteins Nutrition 0.000 description 27
- 230000000694 effects Effects 0.000 description 22
- 108091032973 (ribonucleotides)n+m Proteins 0.000 description 20
- 108010011145 Fushi Tarazu Transcription Factors Proteins 0.000 description 20
- 101150084041 WT1 gene Proteins 0.000 description 20
- 241000700159 Rattus Species 0.000 description 18
- 239000000523 sample Substances 0.000 description 18
- 241000699666 Mus <mouse, genus> Species 0.000 description 17
- 239000000262 estrogen Substances 0.000 description 17
- 229940011871 estrogen Drugs 0.000 description 17
- 101000899361 Homo sapiens Bone morphogenetic protein 7 Proteins 0.000 description 16
- RJKFOVLPORLFTN-LEKSSAKUSA-N Progesterone Chemical compound C1CC2=CC(=O)CC[C@]2(C)[C@@H]2[C@@H]1[C@@H]1CC[C@H](C(=O)C)[C@@]1(C)CC2 RJKFOVLPORLFTN-LEKSSAKUSA-N 0.000 description 16
- 239000002299 complementary DNA Substances 0.000 description 16
- 230000035935 pregnancy Effects 0.000 description 16
- 102000007399 Nuclear hormone receptor Human genes 0.000 description 15
- 108020005497 Nuclear hormone receptor Proteins 0.000 description 15
- 108091092724 Noncoding DNA Proteins 0.000 description 12
- 230000033228 biological regulation Effects 0.000 description 12
- 210000002966 serum Anatomy 0.000 description 12
- 210000000056 organ Anatomy 0.000 description 11
- 241000894007 species Species 0.000 description 11
- VOXZDWNPVJITMN-ZBRFXRBCSA-N 17β-estradiol Chemical compound OC1=CC=C2[C@H]3CC[C@](C)([C@H](CC4)O)[C@@H]4[C@@H]3CCC2=C1 VOXZDWNPVJITMN-ZBRFXRBCSA-N 0.000 description 10
- 241000699670 Mus sp. Species 0.000 description 10
- 238000000636 Northern blotting Methods 0.000 description 10
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 10
- 238000003556 assay Methods 0.000 description 10
- 210000000988 bone and bone Anatomy 0.000 description 10
- 102000046107 human BMP7 Human genes 0.000 description 10
- 108020004017 nuclear receptors Proteins 0.000 description 10
- 238000001890 transfection Methods 0.000 description 10
- 230000014616 translation Effects 0.000 description 10
- PEDCQBHIVMGVHV-UHFFFAOYSA-N Glycerine Chemical compound OCC(O)CO PEDCQBHIVMGVHV-UHFFFAOYSA-N 0.000 description 9
- 238000004458 analytical method Methods 0.000 description 9
- 239000000047 product Substances 0.000 description 9
- 230000001105 regulatory effect Effects 0.000 description 9
- 210000004291 uterus Anatomy 0.000 description 9
- 108091008908 NR5A3 Proteins 0.000 description 8
- 102100022669 Nuclear receptor subfamily 5 group A member 2 Human genes 0.000 description 8
- 238000009396 hybridization Methods 0.000 description 8
- 239000000186 progesterone Substances 0.000 description 8
- 229960003387 progesterone Drugs 0.000 description 8
- 238000012360 testing method Methods 0.000 description 8
- 238000013519 translation Methods 0.000 description 8
- 108091034057 RNA (poly(A)) Proteins 0.000 description 7
- 230000003466 anti-cipated effect Effects 0.000 description 7
- 101150055766 cat gene Proteins 0.000 description 7
- 238000004113 cell culture Methods 0.000 description 7
- 239000003795 chemical substances by application Substances 0.000 description 7
- 230000004927 fusion Effects 0.000 description 7
- 210000004962 mammalian cell Anatomy 0.000 description 7
- 210000001672 ovary Anatomy 0.000 description 7
- 239000000243 solution Substances 0.000 description 7
- 210000003932 urinary bladder Anatomy 0.000 description 7
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 6
- 108060001084 Luciferase Proteins 0.000 description 6
- 239000000284 extract Substances 0.000 description 6
- 230000000977 initiatory effect Effects 0.000 description 6
- 210000001161 mammalian embryo Anatomy 0.000 description 6
- 238000013518 transcription Methods 0.000 description 6
- 230000035897 transcription Effects 0.000 description 6
- 108091003079 Bovine Serum Albumin Proteins 0.000 description 5
- 102000002265 Human Growth Hormone Human genes 0.000 description 5
- 108010000521 Human Growth Hormone Proteins 0.000 description 5
- 239000000854 Human Growth Hormone Substances 0.000 description 5
- 241001465754 Metazoa Species 0.000 description 5
- 101000899362 Mus musculus Bone morphogenetic protein 7 Proteins 0.000 description 5
- 241000283973 Oryctolagus cuniculus Species 0.000 description 5
- 150000001413 amino acids Chemical class 0.000 description 5
- 239000003814 drug Substances 0.000 description 5
- 229960005309 estradiol Drugs 0.000 description 5
- 239000000499 gel Substances 0.000 description 5
- 238000002744 homologous recombination Methods 0.000 description 5
- 238000002347 injection Methods 0.000 description 5
- 239000007924 injection Substances 0.000 description 5
- 230000001404 mediated effect Effects 0.000 description 5
- 230000035755 proliferation Effects 0.000 description 5
- 239000011780 sodium chloride Substances 0.000 description 5
- 239000000126 substance Substances 0.000 description 5
- 108091035707 Consensus sequence Proteins 0.000 description 4
- 102000052510 DNA-Binding Proteins Human genes 0.000 description 4
- ZHNUHDYFZUAESO-UHFFFAOYSA-N Formamide Chemical compound NC=O ZHNUHDYFZUAESO-UHFFFAOYSA-N 0.000 description 4
- 102000004067 Osteocalcin Human genes 0.000 description 4
- 108090000573 Osteocalcin Proteins 0.000 description 4
- 229910019142 PO4 Inorganic materials 0.000 description 4
- 229920001213 Polysorbate 20 Polymers 0.000 description 4
- 208000037065 Subacute sclerosing leukoencephalitis Diseases 0.000 description 4
- 206010042297 Subacute sclerosing panencephalitis Diseases 0.000 description 4
- ZSLZBFCDCINBPY-ZSJPKINUSA-N acetyl-CoA Chemical compound O[C@@H]1[C@H](OP(O)(O)=O)[C@@H](COP(O)(=O)OP(O)(=O)OCC(C)(C)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C)O[C@H]1N1C2=NC=NC(N)=C2N=C1 ZSLZBFCDCINBPY-ZSJPKINUSA-N 0.000 description 4
- 239000002671 adjuvant Substances 0.000 description 4
- 235000001014 amino acid Nutrition 0.000 description 4
- 229940098773 bovine serum albumin Drugs 0.000 description 4
- 238000010367 cloning Methods 0.000 description 4
- 238000012258 culturing Methods 0.000 description 4
- 238000012217 deletion Methods 0.000 description 4
- 230000037430 deletion Effects 0.000 description 4
- 238000001514 detection method Methods 0.000 description 4
- 230000004069 differentiation Effects 0.000 description 4
- 102000015694 estrogen receptors Human genes 0.000 description 4
- 108010038795 estrogen receptors Proteins 0.000 description 4
- 230000006801 homologous recombination Effects 0.000 description 4
- NOESYZHRGYRDHS-UHFFFAOYSA-N insulin Chemical compound N1C(=O)C(NC(=O)C(CCC(N)=O)NC(=O)C(CCC(O)=O)NC(=O)C(C(C)C)NC(=O)C(NC(=O)CN)C(C)CC)CSSCC(C(NC(CO)C(=O)NC(CC(C)C)C(=O)NC(CC=2C=CC(O)=CC=2)C(=O)NC(CCC(N)=O)C(=O)NC(CC(C)C)C(=O)NC(CCC(O)=O)C(=O)NC(CC(N)=O)C(=O)NC(CC=2C=CC(O)=CC=2)C(=O)NC(CSSCC(NC(=O)C(C(C)C)NC(=O)C(CC(C)C)NC(=O)C(CC=2C=CC(O)=CC=2)NC(=O)C(CC(C)C)NC(=O)C(C)NC(=O)C(CCC(O)=O)NC(=O)C(C(C)C)NC(=O)C(CC(C)C)NC(=O)C(CC=2NC=NC=2)NC(=O)C(CO)NC(=O)CNC2=O)C(=O)NCC(=O)NC(CCC(O)=O)C(=O)NC(CCCNC(N)=N)C(=O)NCC(=O)NC(CC=3C=CC=CC=3)C(=O)NC(CC=3C=CC=CC=3)C(=O)NC(CC=3C=CC(O)=CC=3)C(=O)NC(C(C)O)C(=O)N3C(CCC3)C(=O)NC(CCCCN)C(=O)NC(C)C(O)=O)C(=O)NC(CC(N)=O)C(O)=O)=O)NC(=O)C(C(C)CC)NC(=O)C(CO)NC(=O)C(C(C)O)NC(=O)C1CSSCC2NC(=O)C(CC(C)C)NC(=O)C(NC(=O)C(CCC(N)=O)NC(=O)C(CC(N)=O)NC(=O)C(NC(=O)C(N)CC=1C=CC=CC=1)C(C)C)CC1=CN=CN1 NOESYZHRGYRDHS-UHFFFAOYSA-N 0.000 description 4
- 239000002609 medium Substances 0.000 description 4
- 239000000178 monomer Substances 0.000 description 4
- NBIIXXVUZAFLBC-UHFFFAOYSA-K phosphate Chemical compound [O-]P([O-])([O-])=O NBIIXXVUZAFLBC-UHFFFAOYSA-K 0.000 description 4
- 239000010452 phosphate Substances 0.000 description 4
- 239000013612 plasmid Substances 0.000 description 4
- 230000008488 polyadenylation Effects 0.000 description 4
- 239000000256 polyoxyethylene sorbitan monolaurate Substances 0.000 description 4
- 235000010486 polyoxyethylene sorbitan monolaurate Nutrition 0.000 description 4
- 239000003761 preservation solution Substances 0.000 description 4
- 108091008146 restriction endonucleases Proteins 0.000 description 4
- 238000002741 site-directed mutagenesis Methods 0.000 description 4
- 230000004936 stimulating effect Effects 0.000 description 4
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 4
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 3
- 108700020911 DNA-Binding Proteins Proteins 0.000 description 3
- 229920002307 Dextran Polymers 0.000 description 3
- 238000002965 ELISA Methods 0.000 description 3
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 3
- 108060002716 Exonuclease Proteins 0.000 description 3
- 108091092195 Intron Proteins 0.000 description 3
- 239000005089 Luciferase Substances 0.000 description 3
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 3
- JOCBASBOOFNAJA-UHFFFAOYSA-N N-tris(hydroxymethyl)methyl-2-aminoethanesulfonic acid Chemical compound OCC(CO)(CO)NCCS(O)(=O)=O JOCBASBOOFNAJA-UHFFFAOYSA-N 0.000 description 3
- 206010035226 Plasma cell myeloma Diseases 0.000 description 3
- 108091081024 Start codon Proteins 0.000 description 3
- 239000007994 TES buffer Substances 0.000 description 3
- 108700020467 WT1 Proteins 0.000 description 3
- 102000040856 WT1 Human genes 0.000 description 3
- 230000003213 activating effect Effects 0.000 description 3
- 230000003321 amplification Effects 0.000 description 3
- 239000002269 analeptic agent Substances 0.000 description 3
- 238000010171 animal model Methods 0.000 description 3
- 239000000427 antigen Substances 0.000 description 3
- 102000036639 antigens Human genes 0.000 description 3
- 108091007433 antigens Proteins 0.000 description 3
- 210000001106 artificial yeast chromosome Anatomy 0.000 description 3
- 230000008901 benefit Effects 0.000 description 3
- 239000012148 binding buffer Substances 0.000 description 3
- 230000015572 biosynthetic process Effects 0.000 description 3
- 230000037396 body weight Effects 0.000 description 3
- 239000001506 calcium phosphate Substances 0.000 description 3
- 239000001913 cellulose Substances 0.000 description 3
- 229920002678 cellulose Polymers 0.000 description 3
- 230000008859 change Effects 0.000 description 3
- 238000006243 chemical reaction Methods 0.000 description 3
- 229960005091 chloramphenicol Drugs 0.000 description 3
- WIIZWVCIJKGZOK-RKDXNWHRSA-N chloramphenicol Chemical compound ClC(Cl)C(=O)N[C@H](CO)[C@H](O)C1=CC=C([N+]([O-])=O)C=C1 WIIZWVCIJKGZOK-RKDXNWHRSA-N 0.000 description 3
- 238000011161 development Methods 0.000 description 3
- 230000018109 developmental process Effects 0.000 description 3
- 230000003828 downregulation Effects 0.000 description 3
- 238000004520 electroporation Methods 0.000 description 3
- 238000005516 engineering process Methods 0.000 description 3
- 102000013165 exonuclease Human genes 0.000 description 3
- 230000012010 growth Effects 0.000 description 3
- 230000001965 increasing effect Effects 0.000 description 3
- 238000011534 incubation Methods 0.000 description 3
- 230000001939 inductive effect Effects 0.000 description 3
- 230000002401 inhibitory effect Effects 0.000 description 3
- 210000004185 liver Anatomy 0.000 description 3
- 210000004072 lung Anatomy 0.000 description 3
- 239000003550 marker Substances 0.000 description 3
- 230000004048 modification Effects 0.000 description 3
- 238000012986 modification Methods 0.000 description 3
- 201000000050 myeloid neoplasm Diseases 0.000 description 3
- 238000003199 nucleic acid amplification method Methods 0.000 description 3
- 230000011164 ossification Effects 0.000 description 3
- 230000001009 osteoporotic effect Effects 0.000 description 3
- 229920001184 polypeptide Polymers 0.000 description 3
- 102000004196 processed proteins & peptides Human genes 0.000 description 3
- 238000011552 rat model Methods 0.000 description 3
- 210000005084 renal tissue Anatomy 0.000 description 3
- 230000004044 response Effects 0.000 description 3
- 238000010561 standard procedure Methods 0.000 description 3
- QORWJWZARLRLPR-UHFFFAOYSA-H tricalcium bis(phosphate) Chemical compound [Ca+2].[Ca+2].[Ca+2].[O-]P([O-])([O-])=O.[O-]P([O-])([O-])=O QORWJWZARLRLPR-UHFFFAOYSA-H 0.000 description 3
- 210000003462 vein Anatomy 0.000 description 3
- RKDVKSZUMVYZHH-UHFFFAOYSA-N 1,4-dioxane-2,5-dione Chemical compound O=C1COC(=O)CO1 RKDVKSZUMVYZHH-UHFFFAOYSA-N 0.000 description 2
- QKNYBSVHEMOAJP-UHFFFAOYSA-N 2-amino-2-(hydroxymethyl)propane-1,3-diol;hydron;chloride Chemical compound Cl.OCC(N)(CO)CO QKNYBSVHEMOAJP-UHFFFAOYSA-N 0.000 description 2
- OYPRJOBELJOOCE-UHFFFAOYSA-N Calcium Chemical compound [Ca] OYPRJOBELJOOCE-UHFFFAOYSA-N 0.000 description 2
- 108010035563 Chloramphenicol O-acetyltransferase Proteins 0.000 description 2
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 2
- 108020004705 Codon Proteins 0.000 description 2
- 101150074155 DHFR gene Proteins 0.000 description 2
- 241000255581 Drosophila <fruit fly, genus> Species 0.000 description 2
- 102000004190 Enzymes Human genes 0.000 description 2
- 108090000790 Enzymes Proteins 0.000 description 2
- 241000588724 Escherichia coli Species 0.000 description 2
- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 description 2
- 108010043121 Green Fluorescent Proteins Proteins 0.000 description 2
- 102000004144 Green Fluorescent Proteins Human genes 0.000 description 2
- 101001046870 Homo sapiens Hypoxia-inducible factor 1-alpha Proteins 0.000 description 2
- 101000621309 Homo sapiens Wilms tumor protein Proteins 0.000 description 2
- 102100022875 Hypoxia-inducible factor 1-alpha Human genes 0.000 description 2
- 102000004877 Insulin Human genes 0.000 description 2
- 108090001061 Insulin Proteins 0.000 description 2
- 102000018434 Iron-Regulatory Proteins Human genes 0.000 description 2
- 108010066420 Iron-Regulatory Proteins Proteins 0.000 description 2
- 108010048349 Steroidogenic Factor 1 Proteins 0.000 description 2
- 102100029856 Steroidogenic factor 1 Human genes 0.000 description 2
- 239000004098 Tetracycline Substances 0.000 description 2
- 108700009124 Transcription Initiation Site Proteins 0.000 description 2
- 102000007238 Transferrin Receptors Human genes 0.000 description 2
- 108010033576 Transferrin Receptors Proteins 0.000 description 2
- XSQUKJJJFZCRTK-UHFFFAOYSA-N Urea Chemical compound NC(N)=O XSQUKJJJFZCRTK-UHFFFAOYSA-N 0.000 description 2
- 125000000539 amino acid group Chemical group 0.000 description 2
- 210000004102 animal cell Anatomy 0.000 description 2
- 238000013459 approach Methods 0.000 description 2
- 210000004556 brain Anatomy 0.000 description 2
- 229910052791 calcium Inorganic materials 0.000 description 2
- 239000011575 calcium Substances 0.000 description 2
- 229910000389 calcium phosphate Inorganic materials 0.000 description 2
- 235000011010 calcium phosphates Nutrition 0.000 description 2
- 230000007910 cell fusion Effects 0.000 description 2
- 238000004587 chromatography analysis Methods 0.000 description 2
- 238000010276 construction Methods 0.000 description 2
- 239000012228 culture supernatant Substances 0.000 description 2
- 230000001419 dependent effect Effects 0.000 description 2
- 238000013461 design Methods 0.000 description 2
- 230000029087 digestion Effects 0.000 description 2
- LOKCTEFSRHRXRJ-UHFFFAOYSA-I dipotassium trisodium dihydrogen phosphate hydrogen phosphate dichloride Chemical compound P(=O)(O)(O)[O-].[K+].P(=O)(O)([O-])[O-].[Na+].[Na+].[Cl-].[K+].[Cl-].[Na+] LOKCTEFSRHRXRJ-UHFFFAOYSA-I 0.000 description 2
- 229940079593 drug Drugs 0.000 description 2
- ZMMJGEGLRURXTF-UHFFFAOYSA-N ethidium bromide Chemical compound [Br-].C12=CC(N)=CC=C2C2=CC=C(N)C=C2[N+](CC)=C1C1=CC=CC=C1 ZMMJGEGLRURXTF-UHFFFAOYSA-N 0.000 description 2
- 229960005542 ethidium bromide Drugs 0.000 description 2
- 210000003527 eukaryotic cell Anatomy 0.000 description 2
- 238000002474 experimental method Methods 0.000 description 2
- 239000013604 expression vector Substances 0.000 description 2
- WSFSSNUMVMOOMR-UHFFFAOYSA-N formaldehyde Substances O=C WSFSSNUMVMOOMR-UHFFFAOYSA-N 0.000 description 2
- 238000009472 formulation Methods 0.000 description 2
- 230000006870 function Effects 0.000 description 2
- 230000002068 genetic effect Effects 0.000 description 2
- 239000008103 glucose Substances 0.000 description 2
- 239000005090 green fluorescent protein Substances 0.000 description 2
- 239000003102 growth factor Substances 0.000 description 2
- 238000003306 harvesting Methods 0.000 description 2
- 230000003862 health status Effects 0.000 description 2
- 238000003018 immunoassay Methods 0.000 description 2
- 238000003119 immunoblot Methods 0.000 description 2
- 238000010348 incorporation Methods 0.000 description 2
- 230000005764 inhibitory process Effects 0.000 description 2
- 229940125396 insulin Drugs 0.000 description 2
- 210000003292 kidney cell Anatomy 0.000 description 2
- JJTUDXZGHPGLLC-UHFFFAOYSA-N lactide Chemical compound CC1OC(=O)C(C)OC1=O JJTUDXZGHPGLLC-UHFFFAOYSA-N 0.000 description 2
- 238000012423 maintenance Methods 0.000 description 2
- 230000008774 maternal effect Effects 0.000 description 2
- 239000012528 membrane Substances 0.000 description 2
- 238000000520 microinjection Methods 0.000 description 2
- 238000010369 molecular cloning Methods 0.000 description 2
- 238000002703 mutagenesis Methods 0.000 description 2
- 231100000350 mutagenesis Toxicity 0.000 description 2
- 239000013642 negative control Substances 0.000 description 2
- 108091027963 non-coding RNA Proteins 0.000 description 2
- 102000042567 non-coding RNA Human genes 0.000 description 2
- 230000003204 osmotic effect Effects 0.000 description 2
- 239000000546 pharmaceutical excipient Substances 0.000 description 2
- 239000002953 phosphate buffered saline Substances 0.000 description 2
- 230000004962 physiological condition Effects 0.000 description 2
- 238000002360 preparation method Methods 0.000 description 2
- 210000001938 protoplast Anatomy 0.000 description 2
- 230000002829 reductive effect Effects 0.000 description 2
- -1 retinoids Substances 0.000 description 2
- 238000007423 screening assay Methods 0.000 description 2
- 210000000130 stem cell Anatomy 0.000 description 2
- 239000000758 substrate Substances 0.000 description 2
- 238000007910 systemic administration Methods 0.000 description 2
- 229960002180 tetracycline Drugs 0.000 description 2
- 229930101283 tetracycline Natural products 0.000 description 2
- 235000019364 tetracycline Nutrition 0.000 description 2
- 150000003522 tetracyclines Chemical class 0.000 description 2
- 229940124597 therapeutic agent Drugs 0.000 description 2
- 230000001225 therapeutic effect Effects 0.000 description 2
- 230000025934 tissue morphogenesis Effects 0.000 description 2
- 230000005026 transcription initiation Effects 0.000 description 2
- 238000002054 transplantation Methods 0.000 description 2
- 239000003656 tris buffered saline Substances 0.000 description 2
- 230000035899 viability Effects 0.000 description 2
- KIUKXJAPPMFGSW-DNGZLQJQSA-N (2S,3S,4S,5R,6R)-6-[(2S,3R,4R,5S,6R)-3-Acetamido-2-[(2S,3S,4R,5R,6R)-6-[(2R,3R,4R,5S,6R)-3-acetamido-2,5-dihydroxy-6-(hydroxymethyl)oxan-4-yl]oxy-2-carboxy-4,5-dihydroxyoxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)oxan-4-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid Chemical compound CC(=O)N[C@H]1[C@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O[C@H]1[C@H](O)[C@@H](O)[C@H](O[C@H]2[C@@H]([C@@H](O[C@H]3[C@@H]([C@@H](O)[C@H](O)[C@H](O3)C(O)=O)O)[C@H](O)[C@@H](CO)O2)NC(C)=O)[C@@H](C(O)=O)O1 KIUKXJAPPMFGSW-DNGZLQJQSA-N 0.000 description 1
- 108010088751 Albumins Proteins 0.000 description 1
- 102000009027 Albumins Human genes 0.000 description 1
- 102100023995 Beta-nerve growth factor Human genes 0.000 description 1
- 206010005003 Bladder cancer Diseases 0.000 description 1
- 241000255791 Bombyx Species 0.000 description 1
- 241000255789 Bombyx mori Species 0.000 description 1
- 102100022526 Bone morphogenetic protein 5 Human genes 0.000 description 1
- 102100022525 Bone morphogenetic protein 6 Human genes 0.000 description 1
- BTBUEUYNUDRHOZ-UHFFFAOYSA-N Borate Chemical compound [O-]B([O-])[O-] BTBUEUYNUDRHOZ-UHFFFAOYSA-N 0.000 description 1
- 101100339496 Caenorhabditis elegans hop-1 gene Proteins 0.000 description 1
- 102100033620 Calponin-1 Human genes 0.000 description 1
- 241000282465 Canis Species 0.000 description 1
- 102000008186 Collagen Human genes 0.000 description 1
- 108010035532 Collagen Proteins 0.000 description 1
- 102000012422 Collagen Type I Human genes 0.000 description 1
- 108010022452 Collagen Type I Proteins 0.000 description 1
- 241000699802 Cricetulus griseus Species 0.000 description 1
- IGXWBGJHJZYPQS-SSDOTTSWSA-N D-Luciferin Chemical compound OC(=O)[C@H]1CSC(C=2SC3=CC=C(O)C=C3N=2)=N1 IGXWBGJHJZYPQS-SSDOTTSWSA-N 0.000 description 1
- 239000003298 DNA probe Substances 0.000 description 1
- 101710096438 DNA-binding protein Proteins 0.000 description 1
- 108010014303 DNA-directed DNA polymerase Proteins 0.000 description 1
- 102000016928 DNA-directed DNA polymerase Human genes 0.000 description 1
- CYCGRDQQIOGCKX-UHFFFAOYSA-N Dehydro-luciferin Natural products OC(=O)C1=CSC(C=2SC3=CC(O)=CC=C3N=2)=N1 CYCGRDQQIOGCKX-UHFFFAOYSA-N 0.000 description 1
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 1
- 101710155964 Diuretic hormone 1 Proteins 0.000 description 1
- 239000006144 Dulbecco’s modified Eagle's medium Substances 0.000 description 1
- ZGTMUACCHSMWAC-UHFFFAOYSA-L EDTA disodium salt (anhydrous) Chemical compound [Na+].[Na+].OC(=O)CN(CC([O-])=O)CCN(CC(O)=O)CC([O-])=O ZGTMUACCHSMWAC-UHFFFAOYSA-L 0.000 description 1
- 108010067770 Endopeptidase K Proteins 0.000 description 1
- 108090000331 Firefly luciferases Proteins 0.000 description 1
- BJGNCJDXODQBOB-UHFFFAOYSA-N Fivefly Luciferin Natural products OC(=O)C1CSC(C=2SC3=CC(O)=CC=C3N=2)=N1 BJGNCJDXODQBOB-UHFFFAOYSA-N 0.000 description 1
- 229930091371 Fructose Natural products 0.000 description 1
- RFSUNEUAIZKAJO-ARQDHWQXSA-N Fructose Chemical compound OC[C@H]1O[C@](O)(CO)[C@@H](O)[C@@H]1O RFSUNEUAIZKAJO-ARQDHWQXSA-N 0.000 description 1
- 239000005715 Fructose Substances 0.000 description 1
- 102100039556 Galectin-4 Human genes 0.000 description 1
- 241000287828 Gallus gallus Species 0.000 description 1
- 108700039691 Genetic Promoter Regions Proteins 0.000 description 1
- 102000003886 Glycoproteins Human genes 0.000 description 1
- 108090000288 Glycoproteins Proteins 0.000 description 1
- 108060003393 Granulin Proteins 0.000 description 1
- 101000765010 Homo sapiens Beta-galactosidase Proteins 0.000 description 1
- 101000899388 Homo sapiens Bone morphogenetic protein 5 Proteins 0.000 description 1
- 101000899390 Homo sapiens Bone morphogenetic protein 6 Proteins 0.000 description 1
- 101000945318 Homo sapiens Calponin-1 Proteins 0.000 description 1
- 101000608765 Homo sapiens Galectin-4 Proteins 0.000 description 1
- 101000652736 Homo sapiens Transgelin Proteins 0.000 description 1
- 241000701044 Human gammaherpesvirus 4 Species 0.000 description 1
- FBOZXECLQNJBKD-ZDUSSCGKSA-N L-methotrexate Chemical compound C=1N=C2N=C(N)N=C(N)C2=NC=1CN(C)C1=CC=C(C(=O)N[C@@H](CCC(O)=O)C(O)=O)C=C1 FBOZXECLQNJBKD-ZDUSSCGKSA-N 0.000 description 1
- 241000254158 Lampyridae Species 0.000 description 1
- DDWFXDSYGUXRAY-UHFFFAOYSA-N Luciferin Natural products CCc1c(C)c(CC2NC(=O)C(=C2C=C)C)[nH]c1Cc3[nH]c4C(=C5/NC(CC(=O)O)C(C)C5CC(=O)O)CC(=O)c4c3C DDWFXDSYGUXRAY-UHFFFAOYSA-N 0.000 description 1
- 239000007993 MOPS buffer Substances 0.000 description 1
- 102000055008 Matrilin Proteins Human genes 0.000 description 1
- 108010072582 Matrilin Proteins Proteins 0.000 description 1
- 101000648101 Mus musculus Steroidogenic factor 1 Proteins 0.000 description 1
- 241001045988 Neogene Species 0.000 description 1
- 108010025020 Nerve Growth Factor Proteins 0.000 description 1
- 108700026244 Open Reading Frames Proteins 0.000 description 1
- 102000009890 Osteonectin Human genes 0.000 description 1
- 108010077077 Osteonectin Proteins 0.000 description 1
- 241000009328 Perro Species 0.000 description 1
- 102100037596 Platelet-derived growth factor subunit A Human genes 0.000 description 1
- 101710103506 Platelet-derived growth factor subunit A Proteins 0.000 description 1
- 229920002535 Polyethylene Glycol 1500 Polymers 0.000 description 1
- 239000002202 Polyethylene glycol Substances 0.000 description 1
- 108010076504 Protein Sorting Signals Proteins 0.000 description 1
- 108010094028 Prothrombin Proteins 0.000 description 1
- 108091081062 Repeated sequence (DNA) Proteins 0.000 description 1
- 241000283984 Rodentia Species 0.000 description 1
- 102000012738 S100 Calcium Binding Protein G Human genes 0.000 description 1
- 108010079423 S100 Calcium Binding Protein G Proteins 0.000 description 1
- 238000002105 Southern blotting Methods 0.000 description 1
- 102000007451 Steroid Receptors Human genes 0.000 description 1
- 108010085012 Steroid Receptors Proteins 0.000 description 1
- QAOWNCQODCNURD-UHFFFAOYSA-N Sulfuric acid Chemical compound OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 description 1
- 108010006785 Taq Polymerase Proteins 0.000 description 1
- AUYYCJSJGJYCDS-LBPRGKRZSA-N Thyrolar Chemical class IC1=CC(C[C@H](N)C(O)=O)=CC(I)=C1OC1=CC=C(O)C(I)=C1 AUYYCJSJGJYCDS-LBPRGKRZSA-N 0.000 description 1
- 108091023040 Transcription factor Proteins 0.000 description 1
- 102000040945 Transcription factor Human genes 0.000 description 1
- 102000004338 Transferrin Human genes 0.000 description 1
- 108090000901 Transferrin Proteins 0.000 description 1
- 102000004887 Transforming Growth Factor beta Human genes 0.000 description 1
- 108090001012 Transforming Growth Factor beta Proteins 0.000 description 1
- 108700042768 University of Wisconsin-lactobionate solution Proteins 0.000 description 1
- 229930003316 Vitamin D Natural products 0.000 description 1
- QYSXJUFSXHHAJI-XFEUOLMDSA-N Vitamin D3 Natural products C1(/[C@@H]2CC[C@@H]([C@]2(CCC1)C)[C@H](C)CCCC(C)C)=C/C=C1\C[C@@H](O)CCC1=C QYSXJUFSXHHAJI-XFEUOLMDSA-N 0.000 description 1
- 101710185494 Zinc finger protein Proteins 0.000 description 1
- 102100023597 Zinc finger protein 816 Human genes 0.000 description 1
- NOXMCJDDSWCSIE-DAGMQNCNSA-N [[(2R,3S,4R,5R)-5-(2-amino-4-oxo-3H-pyrrolo[2,3-d]pyrimidin-7-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate Chemical compound C1=2NC(N)=NC(=O)C=2C=CN1[C@@H]1O[C@H](COP(O)(=O)OP(O)(=O)OP(O)(O)=O)[C@@H](O)[C@H]1O NOXMCJDDSWCSIE-DAGMQNCNSA-N 0.000 description 1
- 230000021736 acetylation Effects 0.000 description 1
- 238000006640 acetylation reaction Methods 0.000 description 1
- 238000000376 autoradiography Methods 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- WQZGKKKJIJFFOK-VFUOTHLCSA-N beta-D-glucose Chemical compound OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-VFUOTHLCSA-N 0.000 description 1
- 102000005936 beta-Galactosidase Human genes 0.000 description 1
- 230000008827 biological function Effects 0.000 description 1
- 201000001531 bladder carcinoma Diseases 0.000 description 1
- 210000001172 blastoderm Anatomy 0.000 description 1
- 210000001124 body fluid Anatomy 0.000 description 1
- 239000010839 body fluid Substances 0.000 description 1
- 230000008468 bone growth Effects 0.000 description 1
- 210000001185 bone marrow Anatomy 0.000 description 1
- 210000002805 bone matrix Anatomy 0.000 description 1
- 230000004097 bone metabolism Effects 0.000 description 1
- 230000010072 bone remodeling Effects 0.000 description 1
- 239000000872 buffer Substances 0.000 description 1
- 239000007853 buffer solution Substances 0.000 description 1
- 210000004899 c-terminal region Anatomy 0.000 description 1
- 230000002308 calcification Effects 0.000 description 1
- BPKIGYQJPYCAOW-FFJTTWKXSA-I calcium;potassium;disodium;(2s)-2-hydroxypropanoate;dichloride;dihydroxide;hydrate Chemical compound O.[OH-].[OH-].[Na+].[Na+].[Cl-].[Cl-].[K+].[Ca+2].C[C@H](O)C([O-])=O BPKIGYQJPYCAOW-FFJTTWKXSA-I 0.000 description 1
- 239000004202 carbamide Substances 0.000 description 1
- 238000012832 cell culture technique Methods 0.000 description 1
- 230000024245 cell differentiation Effects 0.000 description 1
- 239000013592 cell lysate Substances 0.000 description 1
- 210000003855 cell nucleus Anatomy 0.000 description 1
- 230000004663 cell proliferation Effects 0.000 description 1
- 238000001311 chemical methods and process Methods 0.000 description 1
- 239000003153 chemical reaction reagent Substances 0.000 description 1
- YDQXYRCYDMRJGD-UHFFFAOYSA-N chloroform;phenol;thiocyanic acid Chemical compound SC#N.ClC(Cl)Cl.OC1=CC=CC=C1 YDQXYRCYDMRJGD-UHFFFAOYSA-N 0.000 description 1
- 210000001612 chondrocyte Anatomy 0.000 description 1
- 230000002648 chondrogenic effect Effects 0.000 description 1
- 238000003776 cleavage reaction Methods 0.000 description 1
- 238000000975 co-precipitation Methods 0.000 description 1
- 230000001113 coital effect Effects 0.000 description 1
- 229920001436 collagen Polymers 0.000 description 1
- 229960005188 collagen Drugs 0.000 description 1
- 238000007906 compression Methods 0.000 description 1
- 230000006835 compression Effects 0.000 description 1
- 210000002808 connective tissue Anatomy 0.000 description 1
- 230000001517 counterregulatory effect Effects 0.000 description 1
- 239000003431 cross linking reagent Substances 0.000 description 1
- 210000004748 cultured cell Anatomy 0.000 description 1
- 235000018417 cysteine Nutrition 0.000 description 1
- XUJNEKJLAYXESH-UHFFFAOYSA-N cysteine Natural products SCC(N)C(O)=O XUJNEKJLAYXESH-UHFFFAOYSA-N 0.000 description 1
- 210000003785 decidua Anatomy 0.000 description 1
- 230000003247 decreasing effect Effects 0.000 description 1
- 230000002950 deficient Effects 0.000 description 1
- 210000004268 dentin Anatomy 0.000 description 1
- 238000010586 diagram Methods 0.000 description 1
- 238000010790 dilution Methods 0.000 description 1
- 239000012895 dilution Substances 0.000 description 1
- 239000000539 dimer Substances 0.000 description 1
- 201000010099 disease Diseases 0.000 description 1
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 description 1
- 238000009510 drug design Methods 0.000 description 1
- 238000007878 drug screening assay Methods 0.000 description 1
- 230000004821 effect on bone Effects 0.000 description 1
- 230000002900 effect on cell Effects 0.000 description 1
- 238000001962 electrophoresis Methods 0.000 description 1
- 230000008030 elimination Effects 0.000 description 1
- 238000003379 elimination reaction Methods 0.000 description 1
- 210000002257 embryonic structure Anatomy 0.000 description 1
- 239000012894 fetal calf serum Substances 0.000 description 1
- 210000003754 fetus Anatomy 0.000 description 1
- 210000002950 fibroblast Anatomy 0.000 description 1
- 238000011049 filling Methods 0.000 description 1
- 239000012530 fluid Substances 0.000 description 1
- 230000004907 flux Effects 0.000 description 1
- 235000013305 food Nutrition 0.000 description 1
- 238000010363 gene targeting Methods 0.000 description 1
- 230000002518 glial effect Effects 0.000 description 1
- 230000004153 glucose metabolism Effects 0.000 description 1
- 230000002710 gonadal effect Effects 0.000 description 1
- 239000001963 growth medium Substances 0.000 description 1
- 230000003394 haemopoietic effect Effects 0.000 description 1
- 210000002216 heart Anatomy 0.000 description 1
- 238000003505 heat denaturation Methods 0.000 description 1
- 229910001385 heavy metal Inorganic materials 0.000 description 1
- 238000004128 high performance liquid chromatography Methods 0.000 description 1
- 230000003054 hormonal effect Effects 0.000 description 1
- 229940088597 hormone Drugs 0.000 description 1
- 239000005556 hormone Substances 0.000 description 1
- 229920002674 hyaluronan Polymers 0.000 description 1
- 229960003160 hyaluronic acid Drugs 0.000 description 1
- 230000002727 hyperosmolar Effects 0.000 description 1
- 230000001900 immune effect Effects 0.000 description 1
- 230000003053 immunization Effects 0.000 description 1
- 238000002649 immunization Methods 0.000 description 1
- 239000000411 inducer Substances 0.000 description 1
- 238000003780 insertion Methods 0.000 description 1
- 230000037431 insertion Effects 0.000 description 1
- 230000010354 integration Effects 0.000 description 1
- 230000003993 interaction Effects 0.000 description 1
- 239000007928 intraperitoneal injection Substances 0.000 description 1
- 238000010253 intravenous injection Methods 0.000 description 1
- 230000029795 kidney development Effects 0.000 description 1
- 230000000670 limiting effect Effects 0.000 description 1
- 238000001638 lipofection Methods 0.000 description 1
- 210000005228 liver tissue Anatomy 0.000 description 1
- 238000011670 long-evans rat Methods 0.000 description 1
- 230000007774 longterm Effects 0.000 description 1
- 210000005075 mammary gland Anatomy 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 230000035800 maturation Effects 0.000 description 1
- 238000005259 measurement Methods 0.000 description 1
- 238000010297 mechanical methods and process Methods 0.000 description 1
- 230000007246 mechanism Effects 0.000 description 1
- 239000012092 media component Substances 0.000 description 1
- 239000013028 medium composition Substances 0.000 description 1
- 230000004060 metabolic process Effects 0.000 description 1
- 229930182817 methionine Natural products 0.000 description 1
- 229960000485 methotrexate Drugs 0.000 description 1
- 238000013508 migration Methods 0.000 description 1
- 230000005012 migration Effects 0.000 description 1
- 238000012544 monitoring process Methods 0.000 description 1
- 230000035772 mutation Effects 0.000 description 1
- 210000004165 myocardium Anatomy 0.000 description 1
- 101150091879 neo gene Proteins 0.000 description 1
- 210000005036 nerve Anatomy 0.000 description 1
- 229940053128 nerve growth factor Drugs 0.000 description 1
- 210000000944 nerve tissue Anatomy 0.000 description 1
- 230000001537 neural effect Effects 0.000 description 1
- 210000004940 nucleus Anatomy 0.000 description 1
- 239000003921 oil Substances 0.000 description 1
- 238000009806 oophorectomy Methods 0.000 description 1
- 239000000162 organ preservation solution Substances 0.000 description 1
- 210000004789 organ system Anatomy 0.000 description 1
- 210000000963 osteoblast Anatomy 0.000 description 1
- 230000003647 oxidation Effects 0.000 description 1
- 238000007254 oxidation reaction Methods 0.000 description 1
- 239000001301 oxygen Substances 0.000 description 1
- 229910052760 oxygen Inorganic materials 0.000 description 1
- 238000007911 parenteral administration Methods 0.000 description 1
- 230000000737 periodic effect Effects 0.000 description 1
- 239000007793 ph indicator Substances 0.000 description 1
- 238000002205 phenol-chloroform extraction Methods 0.000 description 1
- 210000002826 placenta Anatomy 0.000 description 1
- 108010017843 platelet-derived growth factor A Proteins 0.000 description 1
- 238000007747 plating Methods 0.000 description 1
- 229920001515 polyalkylene glycol Polymers 0.000 description 1
- 229920001896 polybutyrate Polymers 0.000 description 1
- 229920001223 polyethylene glycol Polymers 0.000 description 1
- 239000002243 precursor Substances 0.000 description 1
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 1
- 230000037452 priming Effects 0.000 description 1
- 230000008569 process Effects 0.000 description 1
- 230000002285 radioactive effect Effects 0.000 description 1
- 108020003175 receptors Proteins 0.000 description 1
- 238000011084 recovery Methods 0.000 description 1
- 230000009467 reduction Effects 0.000 description 1
- 230000009711 regulatory function Effects 0.000 description 1
- 230000010076 replication Effects 0.000 description 1
- 230000002441 reversible effect Effects 0.000 description 1
- 230000000630 rising effect Effects 0.000 description 1
- 230000007017 scission Effects 0.000 description 1
- 230000035939 shock Effects 0.000 description 1
- 239000007787 solid Substances 0.000 description 1
- 230000009870 specific binding Effects 0.000 description 1
- 210000004989 spleen cell Anatomy 0.000 description 1
- 239000003270 steroid hormone Substances 0.000 description 1
- 101150038671 strat gene Proteins 0.000 description 1
- JJAHTWIKCUJRDK-UHFFFAOYSA-N succinimidyl 4-(N-maleimidomethyl)cyclohexane-1-carboxylate Chemical compound C1CC(CN2C(C=CC2=O)=O)CCC1C(=O)ON1C(=O)CCC1=O JJAHTWIKCUJRDK-UHFFFAOYSA-N 0.000 description 1
- 239000001117 sulphuric acid Substances 0.000 description 1
- 235000011149 sulphuric acid Nutrition 0.000 description 1
- 230000001502 supplementing effect Effects 0.000 description 1
- 230000008093 supporting effect Effects 0.000 description 1
- 230000004083 survival effect Effects 0.000 description 1
- 230000009897 systematic effect Effects 0.000 description 1
- 230000009885 systemic effect Effects 0.000 description 1
- 230000008685 targeting Effects 0.000 description 1
- 208000001608 teratocarcinoma Diseases 0.000 description 1
- VUYXVWGKCKTUMF-UHFFFAOYSA-N tetratriacontaethylene glycol monomethyl ether Chemical compound COCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCO VUYXVWGKCKTUMF-UHFFFAOYSA-N 0.000 description 1
- ZRKFYGHZFMAOKI-QMGMOQQFSA-N tgfbeta Chemical compound C([C@H](NC(=O)[C@H](C(C)C)NC(=O)CNC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H]([C@@H](C)O)NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H]([C@@H](C)O)NC(=O)[C@H](CC(C)C)NC(=O)CNC(=O)[C@H](C)NC(=O)[C@H](CO)NC(=O)[C@H](CCC(N)=O)NC(=O)[C@@H](NC(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)CCSC)C(C)C)[C@@H](C)CC)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC=1C=CC=CC=1)C(=O)N[C@@H](C)C(=O)N1[C@@H](CCC1)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CCC(O)=O)C(=O)N[C@@H](C)C(=O)N[C@@H](CC=1C=CC=CC=1)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(C)C)C(=O)N1[C@@H](CCC1)C(=O)N1[C@@H](CCC1)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CCC(O)=O)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(O)=O)C1=CC=C(O)C=C1 ZRKFYGHZFMAOKI-QMGMOQQFSA-N 0.000 description 1
- 238000010257 thawing Methods 0.000 description 1
- 239000005495 thyroid hormone Substances 0.000 description 1
- 229940036555 thyroid hormone Drugs 0.000 description 1
- 230000009772 tissue formation Effects 0.000 description 1
- 230000002103 transcriptional effect Effects 0.000 description 1
- 238000012546 transfer Methods 0.000 description 1
- 239000012581 transferrin Substances 0.000 description 1
- 230000014621 translational initiation Effects 0.000 description 1
- 229910000391 tricalcium phosphate Inorganic materials 0.000 description 1
- 235000019731 tricalcium phosphate Nutrition 0.000 description 1
- 229940078499 tricalcium phosphate Drugs 0.000 description 1
- 208000010570 urinary bladder carcinoma Diseases 0.000 description 1
- 230000002485 urinary effect Effects 0.000 description 1
- 210000002229 urogenital system Anatomy 0.000 description 1
- 230000002792 vascular Effects 0.000 description 1
- 230000009790 vascular invasion Effects 0.000 description 1
- 235000013311 vegetables Nutrition 0.000 description 1
- 238000012795 verification Methods 0.000 description 1
- 235000019166 vitamin D Nutrition 0.000 description 1
- 239000011710 vitamin D Substances 0.000 description 1
- 150000003710 vitamin D derivatives Chemical class 0.000 description 1
- 229940046008 vitamin d Drugs 0.000 description 1
- 238000005303 weighing Methods 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/475—Growth factors; Growth regulators
- C07K14/51—Bone morphogenetic factor; Osteogenins; Osteogenic factor; Bone-inducing factor
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/85—Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6897—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids involving reporter genes operably linked to promoters
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2830/00—Vector systems having a special element relevant for transcription
- C12N2830/008—Vector systems having a special element relevant for transcription cell type or tissue specific enhancer/promoter combination
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2830/00—Vector systems having a special element relevant for transcription
- C12N2830/42—Vector systems having a special element relevant for transcription being an intron or intervening sequence for splicing and/or stability of RNA
Definitions
- the invention relates generally to the field of drug screening assays. More particularly, the invention relates to methods and compositions for identifying molecules that modulate production of true tissue morphogenic proteins.
- a class of proteins recently has been identified, the members of which are true tissue morphogenic proteins.
- the members of this class of proteins are characterized as competent for inducing the developmental cascade of cellular and molecular events that culminate in the formation of new organ-specific tissue, including any vascular and connective tissue formation as required by the naturally occurring tissue.
- the morphogen ⁇ are competent for inducing all of the following biological functions in a morphogenically permissive environment: (1) stimulating proliferation of progenitor cells; (2) stimulating differentiation of progenitor cells; (3) stimulating the proliferation of differentiated cells and (4) supporting the growth and maintenance of differentiated cells.
- the morphogenic proteins can induce the full developmental cascade of bone tissue morphogenesis, including the migration and proliferation of mesenchymal cells, proliferation and differentiation of chondrocytes, cartilage matrix formation and calcification, vascular invasion, osteoblast proliferation, bone formation, bone remodeling, and hematopoietic bone marrow differentiation. These proteins also have been shown to induce true tissue morphogenesis of non-chondrogenic tissue, including dentin, liver, and nerve tissue.
- a particularly useful tissue morphogenic protein is human OP-1 (Osteogenic Protein-1) , described in U.S. 5,011,691; US Pat. No. 5,266,683 and Ozkaynak et al. (1990) EMBO J. 9 : 2085-2093.
- Species homologues identified to date include mouse OP-1 (see US Pat. 5,266,683) and the Drosophila homologue 60A, described in Wharton et al. (1991) PNAS 88:9214-9218) .
- Other closely related proteins include OP-2 (Ozkaynak (1992) J. Biol. Chem. 267:25220- 25227 and US Pat. No. 5,266,683); BMP5, BMP6 (Celeste et al. (1991) PNAS 87:9843-9847) and Vgr-1 (Lyons et al. (1989) . These disclosures are incorporated herein by reference.
- tissue morphogens can be administered to an animal to regenerate lost or damaged tissue.
- administering a molecule capable of modulating expression of the endogenous tissue morphogen as a means for providing morphogen to a site in vi vo.
- the compounds thus identified have utility both in vi tro and in vi vo .
- Useful compounds contemplated include those capable of stimulating transcription and/or translation of the OP-1 gene, as well as compounds capable of inhibiting transcription and/or translation of the OP-1 gene.
- the invention features compositions and methods for screening candidate compounds for the ability to modulate the effective local or systemic quantity of endogenous OP-1 in an organism, and methods for producing the compounds identified.
- the method is practiced by: (1) incubating one or more candidate compounds with cells transfected with a DNA sequence encoding, in operative association with reporter gene, a portion of an OP-1 non-coding DNA sequence that is competent to act on and affect expression of the associated receptor gene; (2) measuring the level of reporter gene expression in the transfected cell, and (3) comparing the level of reporter gene expressed in the presence of the candidate compound with the level of reporter gene expressed in the absence of the candidate compound.
- the invention features the compound that is identified by use of the method of the invention.
- the screening method of the invention provides a simple method of determining a change in the level of a reporter gene product expressed by a cell following exposure to one or more compound( ⁇ ) .
- the level of an expressed reporter gene product in a given cell culture, or a change in that level resulting from exposure to one or more compound(s) indicates that application of the compound can modulate the level of the morphogen expressed and normally associated with the non-coding sequence.
- an increase in the level of reporter gene expression is indicative of a candidate compound's ability to increase OP-1 expression in vivo .
- a decrease in the level of reporter gene expression is indicative of a candidate compound's ability to decrease or otherwise interfere with OP-1 expression in vi vo .
- the methods and compositions of the invention can be used to identify compounds showing promise as therapeutics for various in vivo and ex vi vo mammalian applications, as well as to identify compounds having numerous utilities.
- morphogen expression inducing compounds can be used in vi vo to correct or alleviate a diseased condition, to regenerate lost or damaged tissue, to induce cell proliferation and differentiation, and/or to maintain cell and tissue viability and/or a differentiated phenotype in vivo or ex vivo.
- the compounds also can be used to maintain the viability of, and the differentiated phenotype of, cells in culture.
- the various in vivo, ex vivo, and in vi tro utilities and applications of the morphogenic proteins described herein are well documented in the art. See, for example, US 92/01968 (WO 94/03200), filed March 11, 1992; US 92/07358 (WO
- Morphogen expression inhibiting compounds identified by the methods, kits and compositions described herein can be used to modulate the degree and/or timing of morphogen expression in a cell. Such compounds can be used both in vi tro and in vi vo to more closely regulate the production and/or available concentration of morphogen.
- gene expression is understood to refer to the production of the protein product encoded by a DNA sequence of interest, including the transcription of the DNA sequence and translation of the mRNA transcript.
- operative association is a fusion of the described DNA sequences with a reporter gene in such a reading frame as to be co-transcribed, or at such a relative positioning as to be competent to modulate expression of the reporter gene.
- vector is understood to mean any nucleic acid comprising a nucleotide sequence of interest and competent to be incorporated into a host cell and recombining with and integrating into the host cell genome.
- vectors include linear nucleic acids, plasmids, phagemids, cosmids, YAC'S (yeast artificial chromosomes) and the like.
- non-coding sequence or “non-coding DNA” includes DNA sequences that are not transcribed into RNA sequence, and/or RNA sequences that are not translated into protein. This category of “non-coding sequence” has been defined for ease of reference in the application, and includes sequences occurring 5' to the ATG site which indicates the start codon and sequences 3' to the stop codon, as well as intervening intron sequences that occur within the coding region of the gene.
- an "OPl-specific" non-coding sequence is understood to define a non- coding sequence that lies contiguous to OP1 specific coding sequence at an OP-1 gene locus under naturally-occurring condition ⁇ . The sequences may include 5', 3' and intron sequences.
- allelic, species and other sequence variants thereof includes point mutations, insertions and deletions such as would be naturally occurring or which can genetically engineered into an OP-1 non-coding DNA sequence and which do not affect substantially the regulation of a reporter gene by the OP-1 non-coding sequence.
- site directed mutagenesis to modify , as by deletion, for example, one or more of the OP-1 non-coding sequences described herein without substantially affecting the regulation of OP-1 or a reporter gene by the modification. Such modifications are considered to be within the scope of the disclosure provided herein.
- a "Wt-l/Egr-1 consensus binding sequence” or Kt-l/Egr-1 consensus binding element” is a nine base sequence which has been shown to be bound by the DNA binding proteins Wt-1 and Egr-1.
- the consensus sequence of the Wt-l/Egr-1 binding site has been determined by homology to be GN3NGGGNG, Seq. ID No. 4 (Rauscher et al. , Science 250:1259-1262 (1990), incorporated herein by reference) .
- a "TCC binding sequence” or “TCC binding element” is an approximately 15 to 20 base sequence of DNA which contains at least three contiguous or non-contiguous repeats of the DNA sequence TCC.
- the TCC binding sequence identified in human OP-1 genomic DNA is shown in Seq. ID No. 5, and the TCC binding sequence identified in murine OP-1 genomic DNA is shown in Seq. ID No. 6.
- the TCC binding sequence has also been shown to be bound by the DNA binding proteins Wt-1 and Egr-1 (Wang et al., Proc. Natl. Acad. Sci. 90:8896-8900 (1993)'; Wang et al. , Biochem Biophys Res. Comm. , 188:433-439 (1992)) .
- FTZ binding sequence or “FTZ binding element” is a Fushi-tarazu DNA sequence (FTZ) that has been shown to be bound by the DNA binding protein Fushi-tarazu (FTZ-F1) .
- the FTZ binding sequence identified in human OP-1 genomic DNA is shown in Seq. ID No. 7.
- the FTZ consensus sequence a consensus sequence for the nuclear hormone receptor ⁇ uperfamily, is YCAAGGYCR.
- a " ⁇ teroid binding sequence” or “steroid binding element” is a DNA sequence that has been shown to be bound by one or more elements, in response to activating signal molecules.
- Example ⁇ of such "activating signal molecules” include retinoids, Vitamin D, and also include steroids such as estrogen and progesterone. Useful elements are anticipated to include the FTZ-F1 protein, WT-1 and Egr-1.
- Activating signal molecules of the nuclear receptor family have recently been ⁇ hown to bind to DNA a ⁇ homodimer ⁇ , heterodimers or as monomers (Parker, M.G., Curr. Op. Cell Biol., 1993, 5:499-504). The formation of heterodimers among the nuclear receptor family molecule ⁇ may significantly increase the diversity of binding elements which are recognized by these nuclear receptors, and provide for differential regulation of genes containing the specific binding sites.
- nuclear receptors have been shown to interact with other accessory factors, such as transcription factors, to stimulate or repress transcription. These interactions, between the nuclear receptors and the nuclear receptors and acce ⁇ ory factors, indicate that there could be significant number of nuclear receptor/accessory factor interaction ⁇ which have widely different tran ⁇ criptional activitie ⁇ .
- nucleic acids include, without limitation, CaP0 4 co-precipitation, electroporation, DEAE-dextran mediated uptake, protoplast fusion, microinjection and lipofusion.
- a key to the invention is the DNA sequences with which the cell is transfected, rather than the mechanical or chemical process by which the DNA incorporation is accomplished.
- U ⁇ eful reporter genes are characterized as being easy to transfect into a suitable host cell, easy to detect using an established assay protocol, and genes whose expression can be tightly regulated.
- reporter genes contemplated to have utility include, without limitation, the luciferase gene, the Green Fluorescent Protein (GFP) gene, the chloramphenicol Acetyl Transferase gene (CAT) , human growth hormone, and beta- galactosidase.
- GFP Green Fluorescent Protein
- CAT chloramphenicol Acetyl Transferase gene
- Additional useful reporter genes are any well characterized genes the expression of which is readily as ⁇ ayed, and examples of such reporter genes can be found in, for example, F.A. Ausubel et al., Eds., Current Protocols in Molecular Biology, John Wiley Sons, New York, (1989).
- the listed reporter genes are only a few of the possible reporter genes, and it is only for ea ⁇ e of description that all available reporter genes are not listed.
- a cell line is to be establi ⁇ hed, particularly where the transfected DNA i ⁇ to be incorporated into the cell' ⁇ genome, lines that can be immortalized are e ⁇ pecially desirable.
- immortalized cell lines are viable for multiple .pas ⁇ ages (e.g., greater than 50 generations) without significant reduction in growth rate or protein production.
- Useful cell types for the method and compositions according to the invention include any eukaryotic cell.
- cell types known to express OP-1 include epithelial cells and cells of uro-genital cell origin, including renal (kidney or bladder) cells, as well as liver, bone, nerve, ovary, cardiac muscle and the like.
- the cells may be derived from tissue or cultured from an established cell line. See, for example Ozkaynak et al. (1991) Bioche . BioPhys . Res. Com . 179 :116-123 for a detailed de ⁇ cription of tissues known to express OP-1.
- Other useful cells include those known to exhibit a steroid receptor, including cells having an estrogen receptor and cells responsive to the FTZ-F1 protein.
- CHO Chinese hamster ovary
- MDCK canine kidney
- NBT-2 rat bladder
- Useful cell types can be obtained from the American Type Culture Collection (ATCC) , Rockville, MD or from the European Collection of Animal Cell Cultures, Portion Down, Salisbury
- SP40JG U.K.
- derived means the cells are from the cultured tissue itself, or are a cell line whose parent cells are of the tissue itself.
- the invention features a vector having a reporter gene operatively associated with a portion of one or more OP-1 non-coding sequences.
- the OP-1 non-coding sequence chosen is independently selected from the 5' (or "upstream") non-coding human or murine OP-1 sequence shown in Seq. ID Nos. 1 and 2, respectively, the 3' (or "downstream") non-coding human or murine OP-1 sequence shown in Seq. ID Nos. 1 or 3, and the human intron non-coding OP-1 sequences shown in Seq. ID No. 1. Also - 9 -
- non-coding sequences e.g., 5', 3' and intron
- portion of OP-1 sequence included in the vector can be a combination of two or more 5' non-coding, 3" non-coding and/or intron OP-1 sequences.
- the vector can include a non-coding 0P1- specific sequence selected from at least one of the following sequence segments of Seq. ID No. 1 presented below, and which define human genomic OP-1 sequence comprising approximately 3.3 Kb of 5' non-coding sequence.
- the start codon begins at po ⁇ ition 3318, and the up ⁇ tream ⁇ equence (bases 1 to 3317) is composed of untranscribed (1 to 2790) and untranslated (2791 to 3317) OPl- ⁇ pecific DNA; approximately 1 Kb of which is presented in Fig. 1 (bottom strand) .
- Useful sequence segments include bases 2548-3317, representing 750 base ⁇ sharing significant (greater than 70% identity) between the mouse and human OP-i homologs (See Fig. 1), and base ⁇ 3170- 3317; 3020-3317; 2790-3317; 2548-2790 of Seq. ID No. 1, all shorter fragments of this region of the DNA.
- base 2790 is the mRNA start site
- other useful sequences include 2790-3317, representing transcribed but not translated 5' coding sequence and shorter fragments of this DNA region as noted above; upstream fragments of OPl-specific DNA, bases 2548-2790; 1549-2790; 1-2790 of Seq. ID No. 1.
- u ⁇ eful ⁇ equence ⁇ egment ⁇ include the approximately 750 ba ⁇ es that have homology between the human and mou ⁇ e OP-1 sequences with additional upstream sequence ⁇ , 2300 to 3317,; 1300 to 3317; 1-3317; all fragments of the disclo ⁇ ed upstream OPl-specific DNA sequence ⁇ of Seq. ID No. 1.
- sequences are defined by the non- coding sequences of the mouse OP-1 homolog, including the following 5 1 non-coding sequence ⁇ (Seq. ID No. 2): 2150-2296, 2000-2296, 1788-2296, and 1549-2296 all of which define the 750 base ⁇ ⁇ haring high sequence identity with the human homolog (See, Fig. 1); 800-2296; 1-2296; 1549-1788, 800-1788 and 1-1788.
- 5 1 non-coding sequence ⁇ (Seq. ID No. 2): 2150-2296, 2000-2296, 1788-2296, and 1549-2296 all of which define the 750 base ⁇ ⁇ haring high sequence identity with the human homolog (See, Fig. 1); 800-2296; 1-2296; 1549-1788, 800-1788 and 1-1788.
- Egr/Wt-1 sites 8 in hOP-1; 7 in mOP-1, known in the art to bind the regulatory elements Egr and Wt-1.
- the invention contemplates a screening material for identifying co pounds which modulate OP-1 expression, the as ⁇ ay comprising the step of identifying compounds which bind Egr/Wt-1 site.
- At least oneWt/Egr-1 element, preferably between 1-6 elements, or at least 6 Wt/Egr-1 element ⁇ are included in a sequence. The relative locations of these elements are indicated in Fig. 1 and at positions 3192-3200; 3143-3151; 3027-3035; 2956-2964; 2732-2740; 2697-2704 of Seq. ID No.
- the length ⁇ of ba ⁇ e ⁇ within the ⁇ e 5' non-coding ⁇ equence ⁇ i ⁇ selected to include portions of the sequence of DNA which was determined to be homologous between murine and human genomic OP-1, separately and as a part of a larger sequence including non-homologous DNA.
- the portion of OP-1 sequence selected can be a portion of the region of homology between murine and human OP-1 DNA sequences, bases 2548-2790 or 2548-3317 of Seq. ID No. 1, or bases 1549 to 1788 or 1549 to 2296 of Seq. ID No. 2, and/or at least one of an Wt-l/Egr-1 consensus binding sequence.
- the portion of OP-1 sequence selected can include a TCC binding sequence, a FTZ binding sequence, a steroid binding sequence, or part or all of an OP-1 intron sequence.
- the relative positions of the TCC and FTZ elements are indicated in Fig. 1 and at positions 2758-2778 (TCC); 2432-2441 (FTZ) of Seq. ID No. 1 and 1755-1769 (TCC) of Seq. ID No. 2.
- the invention features a cell that has been transfected with a reporter gene in operative a ⁇ ociation with a portion of OP-1 non-coding DNA ⁇ equence.
- the portion of OP-1 non ⁇ coding ⁇ equence is independently selected from the 5' (or upstream) non-coding human or murine OP-1 sequence shown in Seq. ID Nos. 1 and 2, the 3' (or downstream) non-coding murine OP-1 sequence shown in Seq. ID No. 3, and the human intron non-coding OP-1 sequence shown in Seq. ID No. 1.
- the six human intron non ⁇ coding OP-1 sequences are at base ⁇ 3736 to 10700; bases 10897 to 11063; bases 11217 to 11424; feese ⁇ 11623 to 13358; bases 13440 to 10548; base ⁇ 15166 to 17250; all of Seq. ID No. 1.
- the portion of OP-1 ⁇ equence ⁇ elected can be a combination of 5' non-coding, 3' non-coding and/or intron OP-1 ⁇ equence.
- the cell can have been transfected with a reporter gene in operative association with a portion of 5' non-coding OP-1 genomic sequence that is independently selected from base ⁇ 3170 to 3317; 3020 to 3317; 2790 to 3317; 2548 to 3317; 2300 to 3317; 1300 to 3317; 1 to 3317; 2548 to 2790; 1549 to 2790; and 1 to 2790; all of Seq. ID No. 1 or ba ⁇ e ⁇ 2150 to 2296; 2000 to 2296; 1788 to 2296; 1549 to 2296; 800 to 2296; 1 to 2296; 1549 to 1788; 800 to 1788; 1 to 1788; all of Seq. ID No. 2.
- the lengths of bases within these 5' non-coding sequences is selected to include portions of the sequence of DNA which was determined to be homologous between murine and human genomic OP-1, separately and as a part of a larger sequence including non-homologous DNA. Additionally, the portion of OP-1 sequence selected can be a portion of the region of homology between murine and human OP-1 DNA sequence ⁇ , such as bases 2548-2790 or 2548-3317 of Seq. ID No. 1, or bases 1549 to 1788 or 1549 to 2296 of Seq. ID No. 2, and at least one of an Wt- 1/Egr-l consensus binding sequence, a TCC binding sequence, a FTZ binding ⁇ equence, a steroid binding sequence, and an intron.
- the portion of OP-1 ⁇ equence ⁇ elected can be a portion of the 5' non-coding human or murine OP-1 genomic DNA sequences, as stated above, and at least one Wt-l/Egr-1 consensus binding sequence alone or in combination with at least one of a TCC binding sequence, a FTZ binding sequence, a steroid binding ⁇ equence, and a human OP-1 intron DNA ⁇ equence.
- more than one wt-l/Egr-1 element i ⁇ used for example, between 1-6, or at least six. These cells are suitable for use in the method of the invention.
- part of the OP-1 coding region i ⁇ anticipated to have an expression regulatory function and also can be added to a vector for use in the screening assay described herein.
- OP-1 protein i ⁇ translated as a precursor polypeptide having an N-terminal signal peptide ⁇ equence (the "pre pro" region) which i ⁇ typically le ⁇ than about 30 amino acid re ⁇ idues, followed by a "pro” region which is about 260 amino acid residues, followed by the additional amino acid residues which comprise the mature protein.
- the pre pro and pro regions are cleaved from the primary translation sequence to yield the mature protein sequence.
- the mature sequence comprises both a conserved C-terminal seven cysteine domain and an N-terminal sequence which varies significantly in sequence between the variou ⁇ morphogens .
- the ature polypeptide chains dimerize and these dimers typically are stabilized by at least one interchain disulfide bond linking the two polypeptide chain subunits.
- the pro domain After the pro domain is cleaved from the OP-1 protein it associate ⁇ noncovalently with the mature dimeric protein, pre ⁇ umably to enhance solubility and/or targeting properties of the mature species. See, for example, PCT/US93/07189, filed July 29, 1993.
- the pro region represents the nucleotide sequence occurring approximately 87 bases downstream of the ATG start codon, and continues for about 980 bases.
- the nucleotide sequence encoding the pro region is highly enriched in a "GC" sequence, which well may be competent to form a secondary ⁇ tructure (e.g., as part of the mRNA transcript) which itself may modulate OP-1 expres ⁇ ion. Accordingly, part or all of the nucleotide sequence encoding an OP-1 pro region, particularly that portion corresponding to a GC rich region, may be used, preferably in combination with one or more OP-1 non coding sequences, in the compositions and methods of the invention.
- the method can be practiced using a cell known to express the OP-1 gene.
- Suitable DNA sequence ⁇ for tran ⁇ fection are de ⁇ cribed below, as well as suitable cells containing transfected DNA sequences.
- kits comprises a cell transfected with a DNA ⁇ equence compri ⁇ ing a reporter gene in operative association with a portion of OP-1 upstream DNA sequence and the reagents nece ⁇ ary for detecting expression of the reporter gene.
- the portion of OP-1 upstream DNA chosen can be any of the various portions which have been described herein.
- medium flux screen assays, and kits therefore, for identifying OP-1 expression modulating compounds are available. These compounds can be naturally occurring molecules, or they can be designed and biosynthetically created using a rational drug design and an established structure/function analysis methodology.
- the compounds can be amino acid-ba ⁇ ed or can be compo ⁇ ed in part or whole of non-proteinaceou ⁇ ⁇ ynthetic organic molecules.
- the OP-1 expression modulating compounds thus identified then can be produced in reasonable quantities using standard recombinant expres ⁇ ion or chemical synthesi ⁇ technology well known and characterized in the art and/or as described herein. For example, automated means for the chemical ⁇ ynthesis of nucleic and amino acid sequences are commercially available. Alternatively, promising candidates can be modified using standard biological or chemical methodologies to, for example, enhance the binding affinity of the compound for a DNA element and the preferred candidate derivative then can be produced in quantity.
- a compound which upregulates (increases) the pro__ction of OP-1 in a kidney cell line is a candidate for systemic administration.
- the candidate can be as ⁇ ayed in an animal model to determine the candidate molecule' ⁇ efficacy in vi vo .
- the ability of a compound to upregulate level ⁇ of circulating OP-1 in vi vo can be u ⁇ ed to correct bone metabolism disea ⁇ e ⁇ ⁇ uch a ⁇ o ⁇ teoporo ⁇ i ⁇ (See, for example, PCT/US92/07932, supra).
- Useful in vi vo animal models for systemic administration are disclosed in the art and below.
- OP-1 i ⁇ differentially expres ⁇ ed in different cell types. Accordingly, it further is anticipated that a candidate compound will have utility a ⁇ an inducer of OP-1 expre ⁇ ion in one cell type but not in another. Thu ⁇ , the invention further contemplates testing a candidate compound for it ⁇ utility in modulating expression of OP-1 in different cells in vivo, including different cells known to express OP-1 under native physiological conditions. Thu ⁇ , in view of this disclosure, one of ordinary skill in recombinant DNA techniques can design and construct appropriate DNA vectors and transfect cells with appropriate DNA sequences for use in the method according to the invention to as ⁇ ay for compounds which modulate the expre ⁇ ion of OP-1. The ⁇ e identified compound ⁇ can be u ⁇ ed to modulate OP-1 production and it ⁇ available concentrations in both in vi vo and in vi tro contexts.
- Fig. 1 shows the alignment of upstream sequences of the murine and human OP-1 gene.
- the murine sequence i ⁇ present in the upper sequence lines and the human sequence is the lower sequence on all lines.
- the murine sequence is numbered backwards, counting back from the first ATG of the translated sequence which is shown highlighted.
- da ⁇ he ⁇ are introduced into the DNA sequence, and three portions of human DNA sequence have been cut from the sequence and placed underneath a gap, below a solid triangle;
- Fig. 2 shows a time course of murine uterus OP-1 mRNA regulation by estrogen; and
- Fig. 3a shows a schematic of the 2 kb and 4 kb OP-1 mRNA ⁇ , the hybridization locations of probes 1 through 7 (indicated by the bars under the schematic) .
- the solid line indicates OP-1 mRNA
- the * indicate potential poly A signals
- the boxes indicate the translated portion of OP-1 mRNA. with the hatched box showing the TGF- ⁇ -like domain.
- the dashed lines indicate genomic DNA sequences.
- the arrows mark the locations of the cleavage site for OP-1 maturation.
- Fig. 3b show ⁇ a Northern blot hybridization analy ⁇ i ⁇ of OP-1 specific 2 kb and 4 kb mRNAs in murine uterine tissue.
- Lanes 1 through 7 correspond to probes 1 through 7 respectively.
- the 2 kb and 4 kb mRNAs are indicated by the 4- and 2-on the left side of Fig. 3b, and a 0.24 to 9.49 kb RNA ⁇ ize ladder is indicated by dashes to the right of the figure.
- OP-1 expression in vivo can be dependent both on cell type and on the statu ⁇ of the cell in a ti ⁇ sue.
- OP-1 protein expres ⁇ ion i ⁇ differentially regulated in uterine ti ⁇ sue depending on the status of the uterine ti ⁇ ue.
- OP-1 expression is dramatically down-regulated in uterine mouse tissue during pregnancy, whereas it is normally expres ⁇ ed in this ti ⁇ sue in virgin mice.
- OP-1 expression in other tissues such as renal tis ⁇ ue apparently i ⁇ unaffected during pregnancy.
- Admini ⁇ tration of estrogen to a virgin mouse is capable of duplicating this down-regulation of OP-1 gene expression.
- Thi ⁇ ⁇ creen yielded four lambda clones which were analyzed by Southern blotting. All clones yielded a 1.5 kb XmnI fragment which was subcloned from lambda 071 into a Bluescript vector and sequenced. Three polyadenylation signal ⁇ (AATAAA) (Proudfoot et al, (1976) Nature, 263:211-214) were found in thi ⁇ genomic fragment, at 3.52-, 3.58-, and 3.59 kb (shown schematically in Fig. 3a by the *) .
- AATAAA polyadenylation signal ⁇
- Human upstream non-coding sequence and additional mouse upstream non-coding ⁇ equence were obtained by ⁇ creemng human and mou ⁇ e genomic libraries, HL1067J and ML1030J respectively
- a schematic diagram of the 2- and 4 kb OP-1 mes ⁇ ages is ⁇ hown in Figure 3a with dashed lines indicating supplementing information derived from murine upstream and downstream genomic DNA.
- Northern blot hybridization ⁇ were performed with probes made from seven non-overlapping DNA fragments (Fig. 3a; probes 1 through 7) specific to the 5' and 3' non-coding region, the protein coding sequence, and genomic regions upstream or downstream of the predicted mRNAs, respectively.
- probe 7 which is specific to sequence ⁇ further down ⁇ tream of the fourth (last) polyadenylation signal, did not hybridize to any message.
- the result ⁇ obtained with the ⁇ e probes confirm the two OP-1 mRNA structures and the approximate 5'- and 3 ⁇ -end boundaries of OP-1 transcript ⁇ ⁇ hown in Figure 3a.
- Thi ⁇ demonstrates that the 2 kb and 4 kb mRNA's are from the same OP-1 genomic locu ⁇ rather than from multiple gene ⁇ .
- the untranslated sequence itself may act therefore to influence mRNA stability.
- the sequence may interact with another protein as has been described for transferrin receptor mRNA.
- IRE-binding protein stabilizes the transferrin receptor mRNA by binding to the 3 ' -end of the mRNA (Standard et al. , 1990, Genes Dev. , l:2157-2168, incorporated herein by reference).
- the 3 ' -end sequences may be interacting with the 5' -end sequence ⁇ thereby affecting initiation of protein ⁇ ynthe ⁇ i ⁇ or, the 3 ' -end sequence ⁇ may be ⁇ erving a ⁇ a binding ⁇ ite for other RNA ⁇ which can interfere with the binding of an expression in modulating molecule, including repressor molecule. (Klausner et al . , 1989, Science, 246:870-872; Kozak, 1992, Ann. Rev. Cell Biol., 8 :197-225, incorporated herein by reference) .
- the cloning of the 5' non-coding genomic murine and human OP-1 DNA sequences demonstrated that a high degree of sequence homology exists between the human and murine 5' non-coding DNA sequences.
- the homology extends from the base immediately upstream of the translation start site for the OP-1 morphogen protein to approximately 750 bases upstream of the translation start site, a ⁇ is shown in the shaded regions of Fig. 1, with the murine sequences being the upper lines and the human sequences being the lower lines.
- the 5' nucleotide of the region of homology for the human OP-1 5' non-coding ⁇ equence i ⁇ base 2548 of Seq. ID No. 1 and for the murine OP-1 5' non-coding sequence is base 1549 of Seq. ID No. 2.
- thi ⁇ region contain ⁇ ⁇ everal conserved DNA sequences which have been identified as the DNA binding sequences for two DNA binding proteins, Wt-1 and Egr-1, which both recognize these DNA sequences.
- the DNA binding sequences for Wt-l/Egr-1 present in human and murine are marked in Fig. 1 with a single line.
- the TCC binding sequence, a DNA binding sequence for Wt-1 and Egr-1 is marked in Fig. 1 by the - 19 -
- WT-1 and Egr-1 proteins have also been implicated in the regulation of expression of several genes which are unrelated to OP-1.
- the analysis also revealed, in the human upstream region, a pattern of seven TCC repeats, present at -561, immediately 3' of two Egr/Wt-1 sequences (at -624 and -587) (Figure 1, shown by double solid lines and at position 2758-2778 of Seq. ID No. 1) .
- the mouse upstream region contains a similar, albeit les ⁇ obviou ⁇ ⁇ equence at -356 and at position 1755-1769 of Seq. ID No. 2.
- Thi ⁇ TCC-repeat pattern is found in the promoters of PDGF-A and several other growth-related genes, and Wt-1 has been found to activate transcription when either of the ⁇ equences are present and to suppress it when both sequences are present.
- estrogen receptor may exert its effect on OP-1 expres ⁇ ion in uteru ⁇ by upregulating Wt-1, either directly or indirectly.
- other regulatory element ⁇ located further up ⁇ tream of the OP-1 gene may be involved in estrogen regulation.
- the human 5' non-coding DNA sequence is shown to contain a Fushi-tarazu (FTZ) binding sequence which i ⁇ marked by carat ⁇ below the human DNA ⁇ equence.
- a FTZ binding sequence i ⁇ bound by the Fushi-tarazu protein (FTZ-F1) which i ⁇ a member of the superfamily of nuclear receptors (Parker, (1993) Current opinion in Cell Biology, _5:499-504, ) .
- the superfamily of nuclear receptor proteins include steroid hormones, retinoids, thyroid hormone, nerve growth factor and Fu ⁇ hi-tarazu, and are structurally related.
- FTZ-F1 is likely to belong to a ⁇ ubfamily of nuclear receptor ⁇ that bind DNA as monomers.
- the FTZ-F1 protein is a positive regulator at the fu ⁇ hi-tarazu gene in blastoderm stage embryos of Drosophila .
- FTZ-F1 is closely related in the silkworm (Bombyx) BmFTZ-Fl protein and the mouse embryonal long terminal repeat binding protein (ELP) and all of them are members of the nuclear hormone receptor superfamily, which recognizes the same 9 base pair sequence, 5 ' -PyCAAGGPyCPu- 3'.
- the FTZ binding sequence doe ⁇ not apparently have a direct or inverted repeat. In contrast, other members of the nuclear hormone receptor superfamily usually bind to repeated sequences.
- the FTZ-F1, BmFTZ-Fl and ELP proteins have high affinities for the FTZ binding site DNA, indicating that the mechanism that the binding is somewhat different from that of other members of the nuclear hormone receptor superfamily.
- the transcription initiation site for the human OP-1 gene is at ba ⁇ e 2790 of Seq. ID No. 1 and the analogou ⁇ ⁇ ite for murine i ⁇ at base 1788 of Seq. ID No. 2.
- the tran ⁇ lation initiation site for the human OP-1 gene is at base 3318 of Seq. ID No. 1 and for murine it i ⁇ at ba ⁇ e 2296 of Seq. ID No. 2.
- RNA from the various organ ⁇ of mice wa ⁇ prepared u ⁇ ing the acid-guanidine thiocyanate-phenol-chloroform method (Chomczynski et al., (1987) Anal. Biochem. 162:156-159) .
- the RNA was di ⁇ olved in TES buffer (10 ml. Tris-HCl, 1 mM Na : -EDTA, 0.1% SDS, pH7.5) containing Proteinase K (Stratagene, La Jolla, CA; approx. 1 mg proteina ⁇ e /ml TES) and incubated at 37°C for 1 hr.
- RNA total RNA obtained from 1 g of ti ⁇ ue wa ⁇ mixed with approximately 0.Ig of oligo(dT) -cellulo ⁇ e (in 11 ml TES containing 0.5 M NaCl) .
- the tube ⁇ containing the RNA and oligo(dT) -cellulose were gently shaken for approx. 2 hrs. Thereafter, the oligo(dT)- cellulose was wa ⁇ hed twice in lx binding buffer and once in 0.5x binding buffer (0.25 M NaCl, 10 mM Tri ⁇ -HCl, 1 mM Na -EDTA, pH 7.4) and poly (A)+ RNA wa ⁇ eluted with water and precipitated with ethanol.
- RNA Poly(A)+ RNA (5 mg per lane) wa ⁇ electrophoresed on 1.2% agarose-formaldehyde gels with 1 mg of 400 ⁇ g/ml ethidium bromide added to each sample prior to heat denaturation (Rosen et al. , (1990) Focus, _12:23-24). Electrophoresis was performed at 100 Volts with continuous circulation of the 1 x MOPS buffer (Ausubel et al. , eds., (1990) Current Protocols in Molecular Biology, John Wiley _. Sons, New York). Following electrophoresi ⁇ , the gels were photographed, rinsed briefly in water, and blotted overnight onto Nytran (Schleicher _. Schuell Inc., Keene, NH) or Duralon-UV
- the 32 P-labeled probe was made from a murine OP-1 cDNA fragment (0.68 kb BstXI-BGlI frg.) by random hexanucleotide priming (Feinberg et al., (1984) Anal. Biochem. , 137:266-267) .
- the hybridization ⁇ were done in 40% formamide, 5x SSPE, 5x Denhardt's, 0.1% SDS, pH 7.5 at 37°C overnight.
- the non-specific counts were washed off by shaking in O.lx SSPE, 0.1% SDS at 50°C.
- filters were stripped in 1 mM Tris-HCl, 1 mM Na 2 -EDTA, 0.1% SDS, pH 7.5 at 80° C for 10 min.
- the high embryonal OP-1 expre ⁇ ion also is detected consistent with the relatively high levels of OP-1 mRNA, found in human placenta.
- the level of OP-1 mRNA measured in the embryo is in the same range as that mea ⁇ ured in adult kidney or virgin uteru ⁇ tissue.
- OP-1 plays a critical role in the development of the embryo which may require appropriate amounts of OP-1 at very specific stage ⁇ of ti ⁇ ue and organ morphogensis.
- OP-1 expression in uterine tissue during pregnancy potentially could interfere with the level of OP-1 produced by the developing embryo, and thereby interfere with proper development of the embryo. Therefore, a shut-down or inhibition of uterine OP-1 expres ⁇ ion during pregnancy might be for the benefit of the fetus.
- non-pregnant female mice were ⁇ ubcutaneously admini ⁇ tered 17 ⁇ -e ⁇ tradiol, or progesterone, or a combination of both.
- the rapid increase in estrogen and progesterone levels during pregnancy was ⁇ imulated.
- Non-pregnant mice were injected ⁇ ubcutaneou ⁇ ly on four con ⁇ ecutive days with increasing dose ⁇ , ⁇ tarting with 20 mg 17 ⁇ -e ⁇ tradiol, or 100 mg progesterone or the combination of both and doubling the dose on each following day.
- the uterus has been identified as a major site of OP-1 expression.
- the level of OP-1 expres ⁇ ion in uterine ti ⁇ sue is comparable to that observed in renal tis ⁇ ue.
- the uterine OP-1 mRNA levels are reduced to the limit of detection.
- the loss of OP-1 expres ⁇ ion corre ⁇ pond ⁇ withalso is rising levels of estrogen during this ⁇ ame time frame.
- co-regulation by means of one or more accessory molecules that interact with estrogen or a related nuclear receptor molecule( ⁇ ) may allow for the independent regulation.
- each of Wt-1 protein (which binds to the wt-l/Egr-1 element) and OP-1 protein are required for normal kidney development, and each are expres ⁇ ed at high level ⁇ during kidney ti ⁇ sue development.
- the OP-1 promoter region contains Wt-1 con ⁇ ensu ⁇ binding element ⁇ .
- Wt-1 protein al ⁇ o has been ⁇ hown to negatively regulate the tran ⁇ cription of the insulin growth factor II gene and the platelet-derived growth factor A chain gene. Kreidberg et al . , Cell, 1993, 74:679-691.
- Wt-1 protein either alone or in combination with one or more molecules is involved in the expression of OP-1.
- Wt-1 protein may act in concert with a nuclear hormone receptor element, including, for example,the estrogen receptor element.
- Estrogen also has been shown to inhibit the uterine expression of calbindin-D 28k , a vitamin D dependent calcium binding protein, the ⁇ -subunit expression of the glycoprotein hormones, and other protein ⁇ involved in bone formation. Estrogen also ha ⁇ been shown to cause dramatic decreases in the steady state mRNA levels of the bone matrix proteins osteocalcin, prepro ⁇ 2(I) chain type I collagen, osteonectin, o ⁇ teopontin, and alkaline pho ⁇ phata ⁇ e in an ovariectomized rat, which i ⁇ a rat model for o ⁇ teoporosis.
- E ⁇ trogen appears to mediate its beneficial effect on bone metaboli ⁇ m in the o ⁇ teoporotic model through inhibition of o ⁇ teoclasts. E ⁇ trogen doe ⁇ not reverse o ⁇ teoporosis.
- OP-1 which is expre ⁇ ed in uterine, renal and bone ti ⁇ ues, is able to induce an increa ⁇ e in bone mass in the osteoporotic model. Thu ⁇ , the negative effect of e ⁇ trogen on OP-1 expre ⁇ sion in uterine tissue may seem unexpected in view of estrogen's effect on bone metabolism.
- the other non-coding sequences such as a ⁇ intron ⁇ and 3 ' non-coding ⁇ equence ⁇ may be involved in the modulation of OP-1 protein expression.
- This invention pre ⁇ ent ⁇ a method in which these non ⁇ coding sequences are assayed while in operative association with a reporter gene for their influence on the expression of OP-1.
- Non- coding sequences which are involved in the modulation of OP-1 expres ⁇ ion will be identified by culturing cells transfected with the non-coding sequences, in operative association with a reporter gene, with one or more compound( ⁇ ), measuring the level of reporter gene expression, and comparing this level of expre ⁇ sion to the level of reporter gene expression in the absence of the compound(s) .
- Any eukaryotic cell including an immortalized cell line suitable for long term culturing conditions i ⁇ contemplated to be u ⁇ eful for the method and cell of the invention.
- Useful cells ⁇ hould be ea ⁇ y to tran ⁇ fect, are capable of ⁇ tably maintaining foreign DNA with an unrearranged ⁇ equence, and have the nece ⁇ ary cellular component ⁇ for efficient tran ⁇ cription and tran ⁇ lation of the protein, including any element ⁇ required for post- tran ⁇ lational modification and ⁇ ecretion, if necessary.
- the cell genotype preferably is deficient for the endogenous selection gene.
- the cell line also ha ⁇ simple media composition requirements, and rapid generation times.
- Particularly useful cell lines are mammalian cell line ⁇ , including myeloma, HeLa, fibroblast, embryonic and variou ⁇ tis ⁇ ue cell line ⁇ , e.g., kidney, liver, lung and the like.
- a large number of cell line ⁇ now are available through the American Type Culture Collection (Rockville, MD) or through the European Collection of Animal Cell Cultures (Porton Down, Salisbury, SP4 OJG, U.K.)
- a ⁇ here, the expression of a reporter gene that is controlled by non-coding sequences of the morphogen OP-1 is to be analyzed, particularly u ⁇ eful cells and cell .
- lines are envisioned to include eukaryotic, preferably mammalian cells of a tissue and cell type known to expres ⁇ OP-1 and/or closely related protein ⁇ .
- Such cell ⁇ include, without limitation, cells of uro-genital cell origin, including kidney, bladder and ovary cel.'.s, lung, liver, mammary gland and cardiac cells, cells of gonadal origin, cells of ga ⁇ trointestinal origin, glial cell ⁇ and other cell line ⁇ known to express endogenous genes encoding morphogenic protein ⁇ .
- Preferred cell lines are of epithelial origin.
- Useful vectors for use in the invention include, but are not limited to cosmids, phagemids, yeast artificial chromosomes or other large vectors. Vectors that can be maintained within the nucleus or integrated into the genome by homologous recombination are also useful. For example a vector such a ⁇ PSV2CAT would be u ⁇ eful. Selected portions of non-coding OP-1 ⁇ equence can be cloned into a useful vector using standard molecular cloning techniques, as will be apparent to one of ordinary skill in the art. Restriction endonuclease sites will be utilized when possible, and can be engineered into the sequence when needed.
- restriction endonuclease sites are needed to be engineered into the sequence, eight base recognition sites are preferable because they generally occur infrequently in DNA and will enhance a practitioners ability to obtain the sequence of interest. Restriction endonuclease sites can be engineered into the non-coding sequence using the common techniques such as site directed mutagenesis and PCR with primers including the desired restriction endonuclease site.
- murine and human OP-1 sequences share a region of high homology covering approximately 750 base ⁇ upstream of the translation initiation site as shown by the shading in Fig. 1.
- This region is positions 2548-3317 of Seq. ID No. 1 and positions 1549-2296 of Seq. ID No. 2.
- the mRNA transcription initiation site lie ⁇ within this region at position 2790 of Seq. ID No. 1 and by analogy at po ⁇ ition 1788 of Seq. ID No. 2, ⁇ hown in Fig. 1 by the upward arrow. Thi ⁇ suggests that positions 2548- 2790 of Seq. ID No. 1 and 1549-1788 of Seq. ID No.
- 3 ' non-coding ⁇ equence ⁇ and intron ⁇ equence ⁇ also can be fused in operative as ⁇ ociation with a reporter gene, either separately or in combination with each other or with 5' non-coding sequences.
- a reporter gene either separately or in combination with each other or with 5' non-coding sequences.
- the positions of the six introns are shown in Seq. ID No.
- nucleic acid construct al ⁇ o could include intron ⁇ equence ⁇ and/or 3" non-coding ⁇ equences.
- a range of u ⁇ eful 5' non-coding fragments has been provided, and as will be apparent to those of ordinary skill in the art, smaller fragments of OP-1 sequence al ⁇ o are useful.
- Such smaller fragment ⁇ can be identified to deleting bases from one or both ends of the provided 5' non-coding fragments, using techniques that are well known in the art and testing the truncated constructs for their ability to modulate reporter gene expre ⁇ sion. In thi ⁇ way, the shorte ⁇ t modulating ⁇ equences can be identified.
- any method for incorporating nucleic acids into cells of interest is contemplated in the method of the invention.
- Calcium phosphate (CaPO , followed by glycerol shock i ⁇ a standard means used in the art for introducing vectors, particularly plasmid DNA into mammalian cells.
- Other methods that may be used include electroporation, protoplast fusion, particularly useful in myeloma tran ⁇ fections, microinjections, lipofections and DEAE-dextran mediated uptake. Method ⁇ for these procedures are described in F.M.
- DNA concentrations per transfection will vary according to the transfection protocol.
- calcium pho ⁇ phate transfection for example, preferably 5-10 ⁇ g plasmid DNA per plasmid type is transfected.
- the DNA to be transfected preferably is es ⁇ entially free of contaminant ⁇ that may interfere with DNA incorporation.
- a ⁇ tandard means used in the art for purifying DNA is by ethidium bromide banding.
- reporter system There are numerous reporter system ⁇ commercially available, which include, without limitation, the chloramphenicol acetyltransferase (CAT), lucifera ⁇ e, GAL4, and the human growth hormone (hGH) assay systems.
- CAT chloramphenicol acetyltransferase
- hGH human growth hormone
- CAT is a well characterized and frequently used reporter system and a' major advantage of this ⁇ ystem is that it is an extensively validated and widely accepted measure of promoter activity. See, for example, Gorman, CM., Moffat, L.F., and Howard, B.H. (1982) Mol. Cell. Biol., 2:1044-1051 for a description of the reporter gene and general methodology.
- cells are harvested 2-3 days after tran ⁇ fection with CAT expression vectors and extracts prepared. The extracts are incubated with acetyl CoA and radioactive chloramphenicol. Following the incubation acetylated chloramphenicol is ⁇ eparated from nonacetylated form by thin layer chro atography. In thi ⁇ assay the degree of acetylation reflects the CAT gene activity with the particular promoter.
- Another well-recognized reporter system is the firefly luciferase reporter system. See, for example Gould, S.J., and
- the luciferase a ⁇ ay is fast and has increased ⁇ en ⁇ itivity.
- the ⁇ y ⁇ tem also is particularly useful in bulk transfections or if the promoter of interest is weak.
- thi ⁇ assay transfected cells are grown under standard conditions, and when cultured under assay conditions both ATP and the substrate luciferin is added to the cell lysate.
- the enzyme luciferase catalyzes a rapid, ATP dependent oxidation of the sub ⁇ trate which then emits light.
- the total light output is mea ⁇ ured using a luminometer according to manufacturer' ⁇ in ⁇ tructions (e.g., Cromega) and is proportional to the amount of lucifera ⁇ e pre ⁇ ent over a wide range of enzyme concentrations.
- a third reporter system is ba ⁇ ed on immunologic detection of hGH, it is quick and easy to use. (Selden, R., Burke-Howie, K. Rowe, M.E., Goodman, H.M., and Moore, D.D. (1986), Mol. Cell. Biol. , _6:3173-3179 incorporated herein by reference) .
- hGH i ⁇ assayed in the media, rather than in cell extracts. This allows direct monitoring over by a single population of transfected cells over time.
- the instant invention enables and discloses vector ⁇ , cell ⁇ and a method for screening co pound ⁇ to determine the capability of compound ⁇ to modulate the expre ⁇ ion of OP-1 via the non-coding sequences of the OP-1 genomic DNA.
- Genomic OP-1 up ⁇ tream and promoter ⁇ equence ⁇ preferably 3000 to 5000 nucleotides in length, and which mediate the homologous recombination, are attached to the luciferase gene.
- the OP-1 upstream sequence ⁇ down to the fir ⁇ t coding ATG can be attached at the ⁇ tart codon ATG of the lucifera ⁇ e coding ⁇ equence, u ⁇ ing a restriction ⁇ ite such as Ncol, which can be introduced by site directed mutagenesis into both the promoter and the lucifera ⁇ e sequence ⁇ .
- Al ⁇ o included is a selective marker, preferably the neo gene, without its own promoter.
- selectable marker (neo) is placed downstream of the reporter gene (luciferase), after an intercistronic sequence derived from the polibviru ⁇ genome and which allows translation of the sequence marker on the same transcript as the reporter gene transcripts.
- a genetic arrangement of OP-1 promoter (as much genomic OP-1 up ⁇ tream sequence as possible, up to 10,000 bp) and reporter gene (without its original promoter but joined directly to the OP-1 ATG or in its vicinity) can al ⁇ o be introduced into cell ⁇ on standard eukaryotic expression vectors. These vectors carry selectable markers (neo, dhfr, etc.) and will typically be integrated into the ho ⁇ t genome with variable copy number ranging from one to ⁇ everal copie ⁇ without effort ⁇ at amplification. Al ⁇ o, if desired, the vector or gene copy number can be enhanced u ⁇ ing a well characterized amplifiable gene, ⁇ uch as dhfr in conjunction with methotrexate.
- One source vector is the Episomal Expre ⁇ ion Epstein Barr Virus Vector (pREP, Invitrogen Corp., San Diego CA) .
- Introns also can be tested for regulatory ⁇ equences as described hereinabove using the methods described herein.
- One or more intron sequences derived from a genomic OP-1 locus preferably is introduced into proper mammalian cells using, for example, a yeast artificial chromosome (pYACneo, Clontech, Inc. Palo Alto, CA) (Ref. Albertson, H.M. et al.
- Candidate compound(s) which may be admini ⁇ tered to affect the level of a given endogenou ⁇ morphogen, ⁇ uch as OP-1, or a reporter gene that is fused to OP-1 non-coding sequence may be found using the following screening assay, in which the level of reporter gene production by a cell type which produces measurable levels of the reporter gene expre ⁇ sion product by incubating the cell in culture with and without the candidate compound, in order to assess the effects of the compound on the cell. This can be accomplished by detection of the reporter expression product either at the protein or RNA level.
- the protocol is based on a procedure for identifying compounds which alter endogenous levels of morphogen expres ⁇ ion, a detailed description also may be found in PCT US 92/07359.
- Cultured cells are transfected with portions of OP-1 non- coding sequences in operative association with a reporter gene, and such transfected cells are maintained with the vector remaining as a pla ⁇ mid in the cell nucleus or the vector can be integrated into the host cell genome, preferably at the OP-1 genomic locus.
- Cell ⁇ ample ⁇ for te ⁇ ting the level of reporter gene expre ⁇ ion are collected periodically and evaluated for reporter gene expre ⁇ ion u ⁇ ing the appropriate a ⁇ say for the given reporter gene as indicated in the section describing reporter gene as ⁇ ays, or, alternatively, a portion of the cell culture itself can be collected periodically and u ⁇ ed to prepare polyA(+) RNA for mRNA analysis.
- candidate compounds can be produced in reasonable, u ⁇ eful quantitie ⁇ u ⁇ ing ⁇ tandard methodologies known in the art.
- Amino acid-based molecules can be encoded by synthetic nucleic acid molecules, and expre ⁇ sed in a recombinant expres ⁇ ion system as described herein above or in the art.
- such molecule ⁇ can be chemically synthesized, e.g., by means of an automated peptide ⁇ ynthe ⁇ izer, for example.
- Non-amino acid-based molecule ⁇ can be produced by standard organic chemical synthe ⁇ is procedures.
- CAT gene as the reporter gene and one or more mammalian cell line ⁇ known to expre ⁇ OP-1.
- the example is non limiting, and other cells, reporter genes and OP-1 non-coding sequences are envisioned.
- a DNA fragment containing the OP-1 promoter can be joined to a reporter gene for transfection into a cell line that expresses endogenous OP-1.
- Suitable cell lines are selected by Northern blot hybridization to an OP-1 specific probe (by analyzing the cell extracts for OP-1 mRNA) .
- OP-1 specific probe by analyzing the cell extracts for OP-1 mRNA.
- An approximately 5 Kb EcoRI, BamHI genomic fragment containing approximately 4 Kb of upstream OP-1 ⁇ equences as well as part of the first intron is blunt-ended with T4 DNA polymerase and cloned into a polylinker of a pUC vector (p0146-l).
- the -3.5kb fragment has blunt ends and contains mo ⁇ tly 5' non-coding ⁇ equences and al ⁇ o include ⁇ a ⁇ hort ⁇ tretch of 30 ba ⁇ es into the 0?-l gene.
- This upstream fragment is of -3.5kb ligated to a 1.6 kb Hindlll-BamHI fragment from the CAT gene obtained from the vector SV2CAT by 5' Hindlll end blunted ligation.
- the 1.6kb CAT gene fragment contains about 70 base ⁇ of upstream sequence ⁇ .
- the ⁇ e ligated fragments are cloned into Bluescript KS(-) vector (Stratgene, La Jolla, CA) .
- Thi ⁇ construct in turn is subjected to ⁇ ite specific mutagenesis to delete the extra ⁇ equence ⁇ (approximately 30 base ⁇ ) from the 3' end of the OP-l up ⁇ tream sequences and the adjacent 5' non-coding sequences (approximately 70 bases) from the CAT gene.
- This mutagene ⁇ i ⁇ re ⁇ ult ⁇ in the elimination of any OP-l coding ⁇ equences from the promoter fragment as well as any non-coding sequence ⁇ upstream of the CAT gene.
- the resulting con ⁇ truct is a fusion of OP-l up ⁇ tream ⁇ equences with the CAT gene sequences which encode the CAT protein.
- Suitable cell lines include cell lines that have been shown to contain high levels of OP-l mRNA, indicating that the OP-l promoter is active in the cell ⁇ . Two of these cell lines are mou ⁇ e inner medullary collecting duct (IMCD) cell ⁇ , and the rat bladder carcinoma line (NBT II) . However other cell line ⁇ of the uro-genital system that produce high levels of the OP-l mes ⁇ age can be u ⁇ ed in addition to the many previously mentioned cell types and cell line ⁇ .
- IMCD inner medullary collecting duct
- NBT II rat bladder carcinoma line
- tran ⁇ fection of thi ⁇ vector into an OP-l producing cell line is accomplished following standard techniques, i.e., transfection using calcium phosphate, lipo ⁇ ome mediated tran ⁇ fection, electroporation, or DEA.E-dextran tran ⁇ fection.
- the tran ⁇ fected cells are harvested 48-72 hours after tran ⁇ fection with the CAT expre ⁇ ion vector and extracts are made by succe ⁇ ive freeze-thawing.
- 20 ⁇ l of 4 mM acetyl CoA 32.5 ⁇ l of 1 M Tri ⁇ -HCl, pH 7.5, and 75.5 ⁇ l of water is added to 20 ml of cell extract, and incubated for 1 hour at 37 degree ⁇ Cel ⁇ ius.
- 1 ml ethyl acetate is added to the reaction, microcentrifuged for 1 minute and the top layer i ⁇ removed.
- the main con ⁇ truct can be deleted in sections to determine the regions that are responsible for the observed CAT activity.
- the upstream sequences can be deleted unidirectionally, using an exonuclease such as Bal31, and the deletion product can be analyzed in the CAT activity assay.
- This system can also be used in the method of the invention to screen compounds for their ability to modulate OP-l expression by dividing the cells into several groups, and culturing one group in the absence of any added compounds, and culturing the other groups with one or more candidate compound, and comparing the resulting levels of CAT activity.
- OP-l coding sequence al ⁇ o may be used in the screening method of the invention.
- the OP-l expression preferably is determined by an immunoas ⁇ ay or by Northern or dot blot or other means for measuring mRNA transcript. See, for example, WO 95/11983, published May 4, 1995 for a detailed description on as ⁇ aying changes in OP-l levels in a cell or fluid.
- OP-l is expres ⁇ ed in a variety of different cell type ⁇ , including renal, bone, lung, heart, uterine, cardiac and neural tissue.
- Candidate compounds can be identified which have a modulating effect on cells of one ti ⁇ ue type but not another, and/or wherein the effect i ⁇ modulated in the different cells.
- the as ⁇ ay described belov; can be used to evaluate the effect of a candidate compound( ⁇ ) in a particular cell type known to express OP-l under physiological conditions.
- kidneys may be explanted from neonatal or new born or young or adult rodents (mouse or rat) and used in organ culture as whole or ⁇ liced (1-4 mm) tissue ⁇ .
- Primary ti ⁇ ue cultures and established cell lines, also derived from kidney, adrenals, urinary, bladder, brain, mammary, or other ti ⁇ ue ⁇ may be established in multiwell plates (6 well or 24 well) according to conventional cell culture techniques, and are cultured in the absence or presence of serum for a period of time (1-7 days) .
- Cells may be cultured, for example, in Dulbecco's Modified Eagle medium (Gibco, Long Island, NY) containing serum (e.g., fetal calf serum at 1%-10%, Gibco) or in serum-deprived medium, as desired, or in defined medium (e.g., containing insulin, transferrin, glucose, albumin, or other growth factors) .
- serum e.g., fetal calf serum at 1%-10%, Gibco
- serum-deprived medium e.g., fetal calf serum at 1%-10%, Gibco
- defined medium e.g., containing insulin, transferrin, glucose, albumin, or other growth factors
- Samples for testing the level of OP-l production includes culture supernatants or cell ly ⁇ ate ⁇ , collected periodically and evaluated for OP-l production by immunoblot analysis (Sambrook et al., eds., 1989, Molecular Cloning, Cold Spring Harbor Press, Cold Spring Harbor, NY), or a portion of the cell culture itself, collected periodically and used to prepare polyA+ RNA for RNA analysi ⁇ .
- OP-l ⁇ ynthe ⁇ i ⁇ some cultures are labeled according to conventional procedures with an 35 S- methionine/ 35 S-cy ⁇ teine mixture for 6-24 hour ⁇ and then evaluated to OP-l ⁇ ynthesi ⁇ by conventional im unoprecipitation method ⁇ .
- osteoporotic rat model provides an in vivo model for evaluating the efficacy of a candidate modulating compound.
- alkaline phosphate and o ⁇ teocalcin levels are mea ⁇ ured under conditions which promote o ⁇ teoporo ⁇ i ⁇ , e.g., wherein o ⁇ teoporo ⁇ is is induced by ovary removal in rats and in the presence and absence of a candidate modulating compound.
- a compound competent to enhance or induce endogenous OP-l expression should result in increased osteocalcin and alkaline phosphate levels.
- ovariectomized rats Forty Long-Evans rats (Charles River Laboratorie ⁇ , Wilmington) weighing about 200g each are ovariectomized (OVX) u ⁇ ing ⁇ tandard ⁇ urgical procedure ⁇ , and ten rat ⁇ are sham operated. The ovariectomization of the rats produces an osteoporotic condition within the rats as a result of decreased estrogen production. Food and water are provided ad libitum.
- the rat ⁇ prepared as described above, are divided into three groups: (A) sham-operated rats; (B) ovariectomized rats receiving 1 ml of phosphate-buffered saline (PBS) i.v.
- PBS phosphate-buffered saline
- t ariectomized rats receiving various dose ranges of the candiate stimulating agent either by intravenous injection through the tail vein or direct administration to kidney tissue.
- the effect of the candidate compound on in vivo bone formation can be determined by preparing sections of bone tissue from the ovariectomized rats. Each rat i ⁇ injected with 5 mg of tetracycline, which will stain the new bone (visualized as a yellow color by fluorescence) , on the 15th and 21st day of the study, and on day 22 the rats are sacrificed. The body weights, uterine weights, serum alkaline phosphate levels, serum calcium levels and serum osteocalcin levels then were determined for each rat.
- Bone section ⁇ are prepared and the di ⁇ taance ⁇ eparating " each tetracycline straining i ⁇ mea ⁇ ured to determine the amount of new bone growth.
- the level ⁇ of OP-l in ⁇ erum following injection of the candidate agent al ⁇ o can be monitered on a periodic ba ⁇ is using, for example, the immunoassay described in section ⁇ V and VII above.
- OP-l may be detected u ⁇ ing a polyclonal antibody specific for OP-l in an ELISA, as follows. l ⁇ g/100 ⁇ l of affinity-purified polyclonal rabbit IgG specific for OP-l is added to each well of a 96-well plate and incubated at 37°C for an hour. The wells are washed four time ⁇ with 0.167M ⁇ odium borate buffer with 0.15 M NaCl (BSB) , pH 8.2, containing 0.1% Tween 20.
- BBSB 0.15 M NaCl
- the wells are blocked by filling completely with 1% bovine serum albumin (BSA) in BSB and incubating for 1 hour at 37°C.
- BSA bovine serum albumin
- the wells are then wa ⁇ hed four times with BSB containing 0.1% Tween 20.
- biotinylated rabbit anti-OP-1 ⁇ erum ( ⁇ tock solution is about 1 mg/ml and diluted 1:400 in BSB containing 1% BSA before use) i ⁇ added to each well and incubated at 37°C for 30 min.
- the well ⁇ are then wa ⁇ hed four time ⁇ with BSB containing 0.1% Tween 20.
- 100 ⁇ l streptavidin-alkaline (Southern Biotechnology A ⁇ ociate ⁇ , Inc. Birmingham, Alabama, diluted 1:2000 in BSB containing 0.1% Tween 20 before u ⁇ e) i ⁇ added to each well and incubated at 37 C C for 30 min.
- the plates are washed four times with 0.5M Tris buffered Saline (TBS), pH 7.2.
- 50 ⁇ l substrate ELISA Amplification System Kit, Life Technologies, Inc., Bethesda, MD
- 50 ⁇ l amplifier from the same amplification system kit
- 50 ⁇ l amplifier i ⁇ added and incubated for another 15 min at room temperature.
- the reaction is stopped by the addition of 50 ⁇ l 0.3 M sulphuric acid.
- the OD at 490 nm of the solution in each well is recorded.
- a OP-l standard curve is performed in parallel with the test samples.
- Polyclonal antibody for OP-l protein may be prepared as follows. Each rabbit is given a primary immunization of 100 ⁇ g/500 ⁇ l E. coli produced OP-l monomer (amino acids 328-431 in SEQ ID NO:5) in 0.1% SDS mixed with 500 ⁇ l Complete Freund's Adjuvant. The antigen i ⁇ injected ⁇ ubcutaneously at multiple sites on the back and flanks of the animal. The rabbit is boo ⁇ ted after a month in the same manner using incomplete Freund's Adjuvant. Test bleeds are taken from the ear vein seven days later. Two additional boo ⁇ t ⁇ and test bleeds are performed at monthly interval ⁇ until antibody against OP-l is detected in the serum using an ELISA as ⁇ ay. Then, the rabbit i ⁇ boo ⁇ ted monthly with 100 ⁇ g of antigen and bled (15 ml per bleed) at days ⁇ even and ten after boosting.
- Monoclonal antibody specific for OP-l protein may be prepared as follows. A mouse is given two injection ⁇ of E. coli produced OP-l monomer. The fir ⁇ t injection contain ⁇ lOO ⁇ g of OP-l in complete Freund' ⁇ adjuvant and i ⁇ given ⁇ ubcutaneou ⁇ ly. The ⁇ econd injection contain ⁇ 50 ⁇ g of OP-l in incomplete adjuvant and is given intraperitoneally. The mouse then receives a total of 230 ⁇ g of OP-l (amino acids 307-431 in SEQ ID NO:5) in four intraperitoneal injections at various times over an eight month period.
- mice are boosted intraperitoneally with 100 ⁇ g of OP-l (307-431) and 30 ⁇ g of the N-terminal peptide (Ser 2.3 -Asn 3 o 9 -Cys) conjugated through the added cy ⁇ teine to bovine serum albumin with SMCC crosslinking agent.
- the mou ⁇ e spleen cells are then fu ⁇ ed to myeloma (e.g., 653) cells at a ratio of 1:1 using PEG 1500 (Boeringer Mannheim) , and the cell fusion is plated and screened for OP-1-specific antibodies using OP-l (307-431) as antigen.
- the cell fusion and monoclonal screening then are according to standard procedures well described in standard texts widely available in the art. VII. Exemplary Process for Detecting OP-l in Serum
- OP-l may be detected in body fluids, including serum, and can be used in a protocol for evaluating the efficacy of an OP-l modulating compound in vi vo .
- agarose- activated gel e.g., Affi-GelTM, from Bio-Rad Laboratories, Richmond, CA, prepared following manufacturer' ⁇ instructions
- any commercially available preservation solution may be u ⁇ ed to advantage.
- u ⁇ eful ⁇ olutions known in the art include Collins ⁇ olution, Wisconsin solution, Belzer solution, Eurocollins solution and lactated Ringer's ⁇ olution.
- an organ pre ⁇ ervation ⁇ olution u ⁇ ually po ⁇ e ⁇ e s one or more of the following properties: (a) an osmotic pressure sub ⁇ tantially equal to that of the in ⁇ ide of a mammalian cell, (solutions typically are hyperosmolar and have K+ and/or Mg++ ions present in an amount sufficient to produce an osmotic pres ⁇ ure slightly higher than the inside of a mammalian cell); (b) the ⁇ olution typically is capable of maintaining sub ⁇ tantially normal ATP level ⁇ in the cells; and (c) the solution usually allows optimum maintenance of glucose metabolism in the cell ⁇ .
- Organ pre ⁇ ervation ⁇ olution ⁇ al ⁇ o may contain anticoagulant ⁇ , energy ⁇ ources such as glucose, fructose and other ⁇ ugar ⁇ , metabolite ⁇ , heavy metal chelator ⁇ , glycerol and other material ⁇ of high viscosity to enhance survival at low temperatures, free oxygen radical inhibiting agents and a pH indicator.
- energy ⁇ ources such as glucose, fructose and other ⁇ ugar ⁇ , metabolite ⁇ , heavy metal chelator ⁇ , glycerol and other material ⁇ of high viscosity to enhance survival at low temperatures
- free oxygen radical inhibiting agents and a pH indicator.
- the therapeutic agent may be provided by any suitable means, preferably directly (e.g., locally, as by injection to the tissue or organ locus) or ⁇ y ⁇ temically (e.g., parenterally or orally).
- U ⁇ eful ⁇ olutions for parenteral administration may be prepared by any of the methods well known in the pharmaceutical art, described, for example, in Remington's Pharmaceutical Sciences (Gennaro, A., ed.), Mack Pub., 1990.
- Formulations may include, for example, polyalkylene glycols such as polyethylene glycol, oils of vegetable original, hydrogenated naphthalene ⁇ , and the like.
- Formulation ⁇ for direct administration may include glycerol and other compo ⁇ ition ⁇ of high vi ⁇ co ⁇ ity to help maintain the agent at the de ⁇ ired locus.
- Biocompatible, preferably bioresorbable, polymer ⁇ including, for example, hyaluronic acid, collagen, tricalcium phosphate, polybutyrate, lactide and glycolide polymer ⁇ and lactide/glycolide copolymer ⁇ , may be u ⁇ eful excipients to control the release of the agent in vivo.
- the concentration of the compound ⁇ de ⁇ cribed in a therapeutic compo ⁇ ition will vary depending upon a number of factor ⁇ , including the dosage of the drug to be administered, the chemical characteristics (e.g., hydrophobicity) of the compounds employed, and the route of administration.
- the dosage likely will depend for example, on the size of the tissue or organ to be transplanted, the overall health status of the organ or tissue itself, the length of time between harvest and transplantation (e.g., the duration in ⁇ torage) , the frequency with which the preservation solution is changed, and the type of ⁇ torage anticipated, e.g., low temperature.
- preferred ranges include a concentration range between about 0.1 ng to 100 ⁇ g/kg per tis ⁇ ue or organ weight per day.
- the preferred dosage of drug to be administered al ⁇ o i ⁇ likely to depend on such variables as the type and extent of progression of the disease, the overall health status of the particular patient, the relative biological efficacy of the compound selected, the formulation of the compound excipients, and its route of administration.
- a suitable compound of this invention may be provided in an aqueous physiological buffer solution containing about 0.001% to 10% w/v compound for parenteral admini ⁇ tration. Typical dose ranges are from about 10 ng/kg to about 1 g/kg of body weight per day; and preferred dose range is from about 0.1 ⁇ g/kg to 100 mg/kg of body weight per day.
- MOLECULE TYPE DNA (genomic)
- ORIGINAL SOURCE
- CTCTGGCTCC CCTTTCTCCA CCCATGTGGC CCCTCAGGCT GCCATCTAGT CCAAAAGTCC 1380
- GAGCCCCTCC CAGACAAGCG CCCCCGCTTC CCCAACCTCA GCCCTTCCCA GTTCATCCCA 1560
- ACCTGTCCCC TCGTGGTGCG CCCGCCTTAG GCTACCGGCC GCTCCGAGCC TTGGGGCCCC 4260
- GTGCGCGCAC ATTCTCCAGA CTTGCTCAAA CTAACCCCCC GGAGCAGCGC ACGGGCTGGG 4980
- GCATGTGTGC TTGTATATCA TCGTGTCCTC CTGGAGGAAG ACACCAGGAA CTGGAGAGAG 5520
- TCTCCTGCCT CAGCCTCCCG AGTAGCTGGG AATACAGGCG CCCGCACCAT GCGCGGCTAA 7140
- ATCTTGAACT TCCCAGTCCC CAGAACCATG AGCTAAATAA ACCTTTTTTC TCTATAAATT 9180
- GTCAGGTACC CACCAGGGCC ATGTGCAAAC TGAGATAATG GGGACATGGA ACAAGGGTAA 9600
- CTCTGGGCCT CGGAGGAGGG CTGGCTGGTG TTTGACATCA CAGCCACCAG CAACCACTGG 11160 GTGGTCAATC CGCGGCACAA CCTGGGCCTG CAGCTCTCGG TGGAGACGCT GGATGGTGAG 11220 TCCCCCGCCA CTGCCAGTCC TAATGCAGCC TGTGCTCCTG GACTTCAGGA GGGTCTCAGC 11280 AGTGCTCATG CTTGCTTCAC TACAAACAGG CTTCCCCGCC CCTCCCAACC AGTACTCCAT 11340
- ATCTCATCTA TCCCTTTCAT TTGATTCTGC TCTTTGAGGG CAGGGGTTTT TGTTTCTTTG 16020 TTTGTTTTTT TAAGTGTTGG TTTTCCAAAG CCCTTGCTCC CCTCCTCAAT TGAAACTTCA 16080
- MOLECULE TYPE DNA (genomic)
- AAACAATTTA TCCCCGTTTC TTGGTTTATT CTGACTTTGT AAACAGAAAA GCCGGGGCTG 540
- CTGCCAGTCC CTCAGCCCCA ATTCCTGCCC CATGGTAGGA AATCCATGAG AAAAGCAAAG 960
- CAGAGCCCCA GCTGCCCCAA TGGTTCCTAG CTTCAAATGC AGAGGGTTAA ACTGGCTGCC 1320
- GCCCCCCACC TCCCCGGCAA GCTCAGGGCA GTGCTCATCT GGCTACATCG GTCTTTGAAG 2460
- CAGGCTGAAG CCCAGAGCCA CAAGCCGGAG GGTCCAGATG TGGCCTCTCA GATGTGTGCC 2700
- TTAGCCTCTC AACCCCACCC CCACCCCCAA CCCCAGTGAT GTTTACACAT CTTAAAAAAC 2760
- MOLECULE TYPE DNA (genomic)
- MOLECULE TYPE DNA (genomic)
Landscapes
- Health & Medical Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Genetics & Genomics (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Biotechnology (AREA)
- Molecular Biology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- Biophysics (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Microbiology (AREA)
- Biomedical Technology (AREA)
- Physics & Mathematics (AREA)
- Orthopedic Medicine & Surgery (AREA)
- Toxicology (AREA)
- Gastroenterology & Hepatology (AREA)
- Medicinal Chemistry (AREA)
- Plant Pathology (AREA)
- Analytical Chemistry (AREA)
- Immunology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Detergent Compositions (AREA)
Abstract
Description
Claims
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US25525094A | 1994-06-07 | 1994-06-07 | |
US255250 | 1994-06-07 | ||
PCT/US1995/007349 WO1995033831A1 (en) | 1994-06-07 | 1995-06-07 | Methods and compositions for modulating morphogenic protein expression |
Publications (1)
Publication Number | Publication Date |
---|---|
EP0804573A1 true EP0804573A1 (en) | 1997-11-05 |
Family
ID=22967501
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
EP95923784A Withdrawn EP0804573A1 (en) | 1994-06-07 | 1995-06-07 | Methods and compositions for modulating morphogenic protein expression |
Country Status (5)
Country | Link |
---|---|
EP (1) | EP0804573A1 (en) |
JP (2) | JPH10505223A (en) |
AU (1) | AU703445B2 (en) |
CA (1) | CA2191583C (en) |
WO (1) | WO1995033831A1 (en) |
Families Citing this family (16)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US6103491A (en) * | 1995-07-26 | 2000-08-15 | Creative Biomolecules, Inc. | Methods and compositions for identifying morphogen analogs |
US6090544A (en) * | 1995-07-26 | 2000-07-18 | Creative Biomolecules, Inc. | Methods and compositions for identifying morphogen analogs |
US7306903B1 (en) | 1995-07-26 | 2007-12-11 | Curis, Inc. | Methods and compositions for identifying morphogen analogs |
US5932716A (en) * | 1995-07-26 | 1999-08-03 | Creative Biomolecules, Inc. | Morphogen-responsive regulatory elements |
US5834188A (en) * | 1995-07-26 | 1998-11-10 | Creative Biomolecule, Inc. | Methods and compositions for identifying morphogen analogs |
WO1997014812A2 (en) * | 1995-10-16 | 1997-04-24 | Chiron Corporation | Method of screening for factors that modulate gene expression |
EP0937145A1 (en) * | 1996-11-22 | 1999-08-25 | Akzo Nobel N.V. | Bmp-4 promoter and use thereof in screening of therapeutic agents for the prevention and/or treatment of osteoporosis |
EP0985045B1 (en) | 1997-05-29 | 2008-03-19 | Curis Inc | Modulators of morphogen expression and methods of identifying the same |
JPH11313675A (en) * | 1998-04-30 | 1999-11-16 | Hoechst Marion Roussel Kk | Human BMP-7 promoter and method for searching for bone-related substances using the same |
GB9828709D0 (en) * | 1998-12-24 | 1999-02-17 | Novartis Ag | Assay |
US7598079B2 (en) | 1998-12-24 | 2009-10-06 | Novation Pharmaceuticals, Inc. | Assay for identifying compounds which affect stability of mRNA |
US9068234B2 (en) | 2003-01-21 | 2015-06-30 | Ptc Therapeutics, Inc. | Methods and agents for screening for compounds capable of modulating gene expression |
US8426194B2 (en) | 2003-01-21 | 2013-04-23 | Ptc Therapeutics, Inc. | Methods and agents for screening for compounds capable of modulating VEGF expression |
US8460864B2 (en) | 2003-01-21 | 2013-06-11 | Ptc Therapeutics, Inc. | Methods for identifying compounds that modulate untranslated region-dependent gene expression and methods of using same |
US8283115B1 (en) | 2007-06-20 | 2012-10-09 | Ptc Therapeutics, Inc. | Methods of screening for compounds for treating muscular dystrophy using UTRN mRNA translation regulation |
US8283116B1 (en) | 2007-06-22 | 2012-10-09 | Ptc Therapeutics, Inc. | Methods of screening for compounds for treating spinal muscular atrophy using SMN mRNA translation regulation |
Family Cites Families (7)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5266683A (en) * | 1988-04-08 | 1993-11-30 | Stryker Corporation | Osteogenic proteins |
JPH06508140A (en) * | 1991-06-05 | 1994-09-14 | ザ、プロクター、エンド、ギャンブル、カンパニー | Therapeutic composition for bone induction |
EP1033574A3 (en) * | 1991-08-30 | 2004-01-28 | Curis, Inc. | Morphogenic protein screening method |
GB9206874D0 (en) * | 1992-03-30 | 1992-05-13 | Connaught Lab | Generation of improved inducible mammalian expression vectors |
US5512483A (en) * | 1993-05-21 | 1996-04-30 | Mcgill University | Expression vectors responsive to steroid hormones |
US5585237A (en) * | 1993-10-25 | 1996-12-17 | Creative Biomolecules, Inc. | Methods and compositions for high protein production from recombinant DNA |
WO1995014104A1 (en) * | 1993-11-16 | 1995-05-26 | Children's Medical Center Corporation | Method of identifying a substance capable of inducing bone formation |
-
1995
- 1995-06-07 JP JP8501323A patent/JPH10505223A/en active Pending
- 1995-06-07 AU AU28223/95A patent/AU703445B2/en not_active Ceased
- 1995-06-07 CA CA002191583A patent/CA2191583C/en not_active Expired - Fee Related
- 1995-06-07 EP EP95923784A patent/EP0804573A1/en not_active Withdrawn
- 1995-06-07 WO PCT/US1995/007349 patent/WO1995033831A1/en active Application Filing
-
2005
- 2005-08-22 JP JP2005240508A patent/JP2006025796A/en active Pending
Non-Patent Citations (3)
Title |
---|
CHRISTOPHE ET AL.: "Identification of a cyclic AMP responsive region in thyroglobulin gene promoter", MOLECULAR AND CELLULAR ENDOCRINOLOGY, vol. 64, no. 1, 1989, pages 5 - 18- * |
CHRISTOPHE ET AL: "Identification of a cyclic AMP responsive region in thyroglobulin gene promoter", MOLECULAR AND CELLULAR ENDOCRINOLOGY, vol. 64, no. 1, 1989, pages 5 - 18 * |
See also references of WO9533831A1 * |
Also Published As
Publication number | Publication date |
---|---|
AU703445B2 (en) | 1999-03-25 |
CA2191583C (en) | 2007-03-27 |
WO1995033831A1 (en) | 1995-12-14 |
JPH10505223A (en) | 1998-05-26 |
CA2191583A1 (en) | 1995-12-14 |
JP2006025796A (en) | 2006-02-02 |
AU2822395A (en) | 1996-01-04 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
US6083690A (en) | Methods and compositions for identifying osteogenic agents | |
WO1995033831A1 (en) | Methods and compositions for modulating morphogenic protein expression | |
Ko et al. | Murine and human T-lymphocyte GATA-3 factors mediate transcription through a cis-regulatory element within the human T-cell receptor δ gene enhancer | |
US5916763A (en) | Promoter for VEGF receptor | |
Luo et al. | The matrix Gla protein gene is a marker of the chondrogenesis cell lineage during mouse development | |
US5712119A (en) | Methods and compositions for high protein production form recombinant DNA | |
Mittanck et al. | Essential promoter elements are located within the 5′ untranslated region of human insulin-like growth factor-I exon I | |
Tamura et al. | Identification of a DNA sequence involved in osteoblast-specific gene expression via interaction with helix-loop-helix (HLH)-type transcription factors. | |
WO1996038590A9 (en) | Methods and compositions for identifying osteogenic agents | |
US6103466A (en) | Double-muscling in mammals | |
EP1181056B1 (en) | Lim mineralization protein splice variants | |
US6071695A (en) | Methods and products for identification of modulators of osteogenic protein-1 gene expression | |
US20050271637A1 (en) | BMP-2 estrogen responsive element and methods of using the same | |
Bunyaratavej et al. | Bone morphogenetic proteins secreted by breast cancer cells upregulate bone sialoprotein expression in preosteoblast cells | |
US6828095B1 (en) | Modulators of morphogen expression and methods of identifying the same | |
US20080003675A1 (en) | Methods and compositions for identifying morphogen analogs | |
AU773649B2 (en) | Methods and compositions for modulating morphogenic protein expression | |
AU743061B2 (en) | Methods and compositions for modulating morphogenic protein expression | |
US7741117B2 (en) | Bone mineralization protein expression systems, and methods of studying intracellular signaling pathways induced thereby | |
AU9719101A (en) | Modulators of morphogen expression and methods of identifying the same | |
US6103491A (en) | Methods and compositions for identifying morphogen analogs | |
Matsui et al. | The mechanism of biogenesis and potential function of the two alternatively spliced mRNAs encoded by the murine Msx3 gene | |
Agarwal | Regulation of alpha-1 (I) collagen gene transcription by TGF-beta |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
PUAI | Public reference made under article 153(3) epc to a published international application that has entered the european phase |
Free format text: ORIGINAL CODE: 0009012 |
|
17P | Request for examination filed |
Effective date: 19961231 |
|
AK | Designated contracting states |
Kind code of ref document: A1 Designated state(s): AT BE CH DE DK ES FR GB GR IE IT LI LU MC NL PT SE |
|
AX | Request for extension of the european patent |
Free format text: LT;LV;SI |
|
RAP1 | Party data changed (applicant data changed or rights of an application transferred) |
Owner name: CURIS, INC. |
|
17Q | First examination report despatched |
Effective date: 20020819 |
|
17Q | First examination report despatched |
Effective date: 20020819 |
|
RAP1 | Party data changed (applicant data changed or rights of an application transferred) |
Owner name: STRYKER CORPORATION |
|
STAA | Information on the status of an ep patent application or granted ep patent |
Free format text: STATUS: THE APPLICATION HAS BEEN WITHDRAWN |
|
18W | Application withdrawn |
Effective date: 20081125 |