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DK172818B1 - Antibiotic polypeptide, method for its preparation and its use - Google Patents

Antibiotic polypeptide, method for its preparation and its use Download PDF

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DK172818B1
DK172818B1 DK198505099A DK509985A DK172818B1 DK 172818 B1 DK172818 B1 DK 172818B1 DK 198505099 A DK198505099 A DK 198505099A DK 509985 A DK509985 A DK 509985A DK 172818 B1 DK172818 B1 DK 172818B1
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epidermin
acid
culture
methanol
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Guenther Jung
Rolf-Guenther Werner
Hans Zaehner
Hermann Allgaier
Ursula Schneider
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Thomae Gmbh Dr K
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Priority claimed from DE19853523478 external-priority patent/DE3523478A1/en
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    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/04Antibacterial agents
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    • C12R2001/44Staphylococcus
    • C12R2001/45Staphylococcus epidermidis

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Description

i DK 172818 B1in DK 172818 B1

Opfindelsen angår et antibiotisk virkende poly-peptid, i det følgende omtalt som Epidermin, en fremgangsmåde til dets fremstilling ved hjælp af en over for dette stof resistent hidtil ukendt stamme af Sta-5 phylococcus epidermidis, den hidtil ukendte resistente stamme, antibiotiske præparatformer Indeholdende det aktive stof Epidermin og anvendelse af det aktive stof til bekæmpelse af infektionssygdomme.The invention relates to an antibiotic-acting polypeptide, hereinafter referred to as Epidermin, a process for its preparation by a novel strain-resistant strain of Staphylococcus epidermidis, the novel resistant strain, antibiotic formulations containing the active substance Epidermin and use of the active substance to control infectious diseases.

Fra europæisk patentpublikation EP-A-0,027.710 10 er det kendt, at en særlig stamme af Staphylococcus epidermidis, nemlig Staphylococcus epidermidis NCIB 11536 (deponeret hos the National Collection of Industrial Bacteria, Aberdeen) frembringer et lavmolekylært, antibiotisk aktivt polypeptid med en bred virkning på 15 grampositive kim, hvilket peptid lyserer bakterieceller.From European Patent Publication EP-A-0,027,710 it is known that a particular strain of Staphylococcus epidermidis, namely Staphylococcus epidermidis NCIB 11536 (deposited with the National Collection of Industrial Bacteria, Aberdeen) produces a low molecular weight, antibiotic active polypeptide with a broad effect 15 gram-positive germs, which peptide lyses bacterial cells.

Det er endvidere kendt, at stammen Staphylococcus epidermidis MF 205 (S.M,Taylor et al., Int.J.Mass Spec-trom. and Ion Physics £8, 161-164, 1983) ligeledes producerer et oligopeptid med virkning over for grampo-20 sitive bakterier. Det fremgår ikke af nævnte offentliggørelse, om denne stamme er identisk med ovennævnte stamme NCIB 11536.Furthermore, it is known that the strain Staphylococcus epidermidis MF 205 (SM, Taylor et al., Int. J. Mass Spec. And Ion Physics 8, 161-164, 1983) also produces an oligopeptide having effect against 20 sensitive bacteria. It is not clear from this publication whether this strain is identical to the above strain NCIB 11536.

Det har nu vist sig, at en resistent mutant af Staphylococcus epidermidis, der den 26. oktober 1984 er 25 deponeret hos "Deutsche Sammlung von Mikroorganismen" under nummer DSM 3095, og som er beslægtet med ovennævnte stamme NCIB 11536, efter en modificeret fremstillings- og oparbejdningsmetode frembringer det lignende antibiotisk, fortrinsvis på grampositive kim, virkende 30 polypeptid Epidermin, der ved sammenligning med produkterne fra Staphylococcus epidermidis NCIB 11536 og MF 205 blandt andet udviser betydelige forskelle med hensyn til aminosyresammensætningen:It has now been found that a resistant mutant of Staphylococcus epidermidis, deposited on October 26, 1984, with "Deutsche Sammlung von Microorganism" under number DSM 3095, and related to the above strain NCIB 11536, after a modified and work-up method produces the similar antibiotic, preferably on Gram-positive germ, acting polypeptide Epidermin, which, when compared with the products of Staphylococcus epidermidis NCIB 11536 and MF 205, exhibits, among other things, significant differences in amino acid composition:

Sammenligning af bygningsdele:Comparison of building components:

YY

2 DK 172818 B12 DK 172818 B1

Epidermin Produkter fra Staph.epidermidis _MF 205_NCIB 11536Epidermin Products from Staph.epidermidis _MF 205_NCIB 11536

Asn 1 - 5 Asx - 21Asn 1 - 5 Asx - 21

Glx - 31Glx - 31

Pro 1 11Pro 1 11

Gly 2 22Gly 2 22

Ala 2 2 1Ala 2 2 1

Ile 2 2 1 10 .Ile 2 2 1 10.

Phe 2 21Phe 2 21

Lys 2 21List 2 21

Lan 2 - E-Me-Lan 1 -Lan 2 - E-Me Lan 1 -

Dhb 1 - 15 Tyr 1 1 S-(2-Aminovinyl)-D-cystein 1 X - 1-2 20 Dhb svarer til α, β-dehydroainirosrnørsyre, Asx og Glx betyder henholdsvis Asn/Asp og Gln/Glu.Dhb 1 - 15 Tyr 1 1 S- (2-Aminovinyl) -D-cysteine 1 X - 1-2 20 Dhb corresponds to α, β-dehydroainiroic acid, Asx and Glx means Asn / Asp and Gln / Glu respectively.

Efter totalhydrolyse af Epidermin med 6N saltsyre (18 timer ved 110°C) viste den kvantitative amino-syreanalyse ved ionbytterchromatografi (standardprogram 25 med udstyret Biotronik LC 6000 E) følgende a-aroinosyre-sammensætning:After total hydrolysis of Epidermin with 6N hydrochloric acid (18 hours at 110 ° C), the quantitative amino acid analysis by ion exchange chromatography (standard program 25 with equipped Biotronik LC 6000 E) showed the following α-aroinoic acid composition:

Asp (1,00), Pro (0,95), Gly (2,09), Ala (2,03),Asp (1.00), Pro (0.95), Gly (2.09), Ala (2.03),

Ile (2,03), Tyr (0,30), Phe (2,02) og Lys (2,00) (jfr.Ile (2.03), Tyr (0.30), Phe (2.02) and Lys (2.00) (cf.

I Fig.l) . Ved tilsætning af thioglycolsyre øgedes tyrosin- 30 indholdet i totalhydrolysatet til den vidtgående støkiometriske værdi på 0, 93.In Fig. 1). By adding thioglycolic acid, the tyrosine content of the total hydrolyzate was increased to the far-reaching stoichiometric value of 0.93.

Konfigurationen af proteinaminosyrerne fandtes ved gaschromatografi af pentafluorpropionyl-aminosyre-n-propylesteren fra totalhydrolysatet. Adskillelsen 35 foregik på den chirale stationære fase L-valin-tert.-—r butylamid-polysiloxan (Chirasil-Val). Ved sammenligning med en testblanding af aminosyrer med kendt konfigura- il 3 DK 172818 B1 w tion kunne de ovenfor anførte opbyggende dele tildeles L-konfigurationen (jfr.Fig.2) .The configuration of the protein amino acids was found by gas chromatography of the pentafluoropropionyl amino acid n-propyl ester from the total hydrolyzate. Separation 35 occurred on the chiral stationary phase L-valentine-butylamide-polysiloxane (Chirasil-Val). By comparison with a test mixture of amino acids of known configuration, the above-mentioned structural components could be assigned to the L configuration (cf. Fig. 2).

Til disse proteinaminosyrer kommer yderligere følgende ikke-proteinaminosyrer: Lanthionin (2), β-me-5 thyllanthionin (1) og α,β-dehydroaminosmørsyre (1). Heraf har lanthionin meso-konfiguration og β-methyllan-thonin 2S,3S,6R-konfiguration. Yderligere indeholder Epidermin som opbyggende del S-(2-aminovinyl)-D-cystein.In addition to these protein amino acids, there are the following non-protein amino acids: Lanthionine (2), β-methyllanthionine (1) and α, β-dehydroaminobutyric acid (1). Of these, lanthionine has meso configuration and β-methyllanethonine 2S, 3S, 6R configuration. In addition, Epidermin contains as component S- (2-aminovinyl) -D-cysteine.

Den hidtil ukendte forbindelse Epidermin kan 10 karakteriseres ved følgende angivelser: 1. Natur: Farveløst pulver.The novel compound Epidermin can be characterized by the following indications: 1. Nature: Colorless powder.

2. Opløselighed: Meget godt opløseligt i blandinger af vand/iseddike eller methanol/iseddike, opløseligt i lavere alkoholer, uopløseligt i chloroform, ace-15 tone, diethylether, petroleumsether.2. Solubility: Very well soluble in mixtures of water / glacial acetic acid or methanol / glacial acetic acid, soluble in lower alcohols, insoluble in chloroform, acetone, diethyl ether, petroleum ether.

3. Farvereaktion på silicagelplader: Ninhydrin^hlor/TEM (TDM* 4,4'-bis-(dimethylamlno)diphenylmethan), or-cin/svovlsyre, anisaldehyd/svovlsyre. Ødelæggelses-fri påvisning i UV-lys ved 254 ran og ved sprøjtning 20 med vand.3. Color reaction on silica gel plates: Ninhydrin ^ chloro / TEM (TDM * 4,4'-bis- (dimethylamino) diphenylmethane), orcin / sulfuric acid, anisaldehyde / sulfuric acid. Destruction-free detection in UV light at 254 runs and at spraying 20 with water.

4. Tyndtlagschromatografi: Der anvendtes silicagel- færdigplader 60 F254 (Merck).4. Thin-layer chromatography: Silica gel finished plates 60 F254 (Merck) were used.

System A: Chloroform/methanol/17% ammoniak (2/2/1) rf - 0,73System A: Chloroform / methanol / 17% ammonia (2/2/1) rf - 0.73

System B: Chloroform/methanol/17% ammoniak (70/35/10) RF * 0,30System B: Chloroform / methanol / 17% ammonia (70/35/10) RF * 0.30

System C: n-Butanol/iseddeke/vand (4/1/1) RF * 0,05 5. HPLC: Se Fig.7.System C: n-Butanol / ice blanket / water (4/1/1) RF * 0.05 5. HPLC: See Fig.7.

6. Stabilitet: Stabilt fra pH=2 til pH=7, ved højere 30 pH-vardier indtræder stærkt aktivitetsfald.6. Stability: Stable from pH = 2 to pH = 7, at higher 30 pH values, a strong decrease in activity occurs.

7. Molmasse: I området 2160. Alt efter isoleringsmeto-der kan der som anioner være indeholdt f.eks. chlo-rid, acetat eller phosphat.7. Molecular mass: In the region of 2160. Depending on isolation methods, as anions may be contained e.g. chloride, acetate or phosphate.

8. Ultraviolet absorptionsspektrum: I vandig opløsning 35 langbølget maksimum ved 267 nro (Fig.3).8. Ultraviolet absorption spectrum: In aqueous solution 35 long-wave maximum at 267 nro (Fig. 3).

v 4 DK 172818 B1 * 9. Infrarødt absorptionsspektrum; IR-spektrum af en prøve i en kaliumbromidtablet (Fig.4). i 10. Kernemagnetiske resonansspektre: ^H-NMR-spektrum: j Fig.5, ^C-NMR-spektrum: Fig.6.v 4 DK 172818 B1 * 9. Infrared absorption spectrum; IR spectrum of a sample in a potassium bromide tablet (Fig. 4). in 10. Nuclear Magnetic Resonance Spectra: HH-NMR Spectrum: Fig Fig. 5, CC-NMR Spectrum: Fig.6.

^ Egnede fragmenter til sekvensbestemmelse af Epi- dermln vandtes ved tryptisk spaltning. Omsætningen med trypsin førte 1 løbet af kort tid til tab af antibiotisk aktivitet. Makroskopisk observeredes ved tryptisk spaltning et geléagtigt hvidt bundfald, der kunne fraskilles ved centrifugering. Supernatanten blev lyo-fillseret og gelchromatograferet på en Spehadex G-25 (dekstrangel fra firmaet Pharmacia) i 1%'s eddikesyre.Suitable fragments for sequencing the epidermin were obtained by tryptic cleavage. The reaction with trypsin over a short period of time led to loss of antibiotic activity. Macroscopically, by tryptic cleavage, a jelly-like white precipitate was observed that could be separated by centrifugation. The supernatant was lyophilized and gel chromatographed on a Spehadex G-25 (cover strain from Pharmacia company) in 1% acetic acid.

Den med ninhydrin, chlor/TDM og vand farvelige, kemisk homogene fraktion (i det følgende betegnet Pi) ^ viste sig som N-terminalt brudstykke fra den tryptiske spaltning af Epidermin (se nedenfor).The chemically homogeneous fraction of ninhydrin, chlorine / TDM and water (hereinafter referred to as Pi) 2 was found to be the N-terminal fragment of the tryptic cleavage of Epidermin (see below).

Det ekstremt hydrofobe, geléagtige bundfald bestod af flere kemiske komponenter, der ved den tryptiske spaltning opstod fra totalmolekylets C-terminale 20 brudstykke. Et kemisk homogent produkt (i det følgende betegnet P2) vandtes ved opløsning af bundfaldet i dimethyl formamid og efterfølgende gelchromatografi på Sephadex LH-20 (dekstrangel, fremstillet ved hydroxy-propylering ud fra Sephadex G-25, Pharmacia) med di-25 methylformamid som elueringsmiddel. P2 kunne påvises med vand, chlor/TDM og under UV-lys. Ninhydrin-reaktionen på P2 var negativ.The extremely hydrophobic, jelly-like precipitate consisted of several chemical components that arose in the tryptic cleavage from the C-terminal 20 fragment of the total molecule. A chemically homogeneous product (hereinafter referred to as P2) was obtained by dissolving the precipitate in dimethyl formamide and subsequent gel chromatography on Sephadex LH-20 (dextran produced by hydroxy propylation from Sephadex G-25, Pharmacia) with dimethylformamide as eluent. P2 could be detected with water, chlorine / TDM and under UV light. The ninhydrin reaction to P2 was negative.

Aminosyreanalysen af fragmentet Pi viste følgende sammensætning: Pro (11, Lan (1), β-Me-Lan (1), Gly (1), 30 Ala (2), Ile (2), Phe (1), Ly3 (2). Da isoleucin ved dansylering af totalmolekylet blev bestemt som N-termi-nal aminosyre, og fragmentet P2 ikke indeholder isoleucin, må fragmentet pi være totalmolekylets N-terminale spaltningsprodukt. Den C-terminale aminosyre af 35 fragment PI må på grundlag af den tryptiske spaltning ] være lysln.The amino acid analysis of the fragment Pi showed the following composition: Pro (11, Lan (1), β-Me-Lan (1), Gly (1), 30 Ala (2), Ile (2), Phe (1), Ly3 (2) Since isoleucine, when dancing the total molecule, was determined as N-terminal amino acid and the fragment P2 does not contain isoleucine, the fragment pi must be the N-terminal cleavage product of the total molecule. The C-terminal amino acid of 35 fragment PI must be based on the tryptic cleavage] be lysln.

Til yderligere struktur-undersøgelse af Pi blev £-:¾For further structural study of Pi, £ -: ¾

Ha Ρΐϋ 5 DK 172818 B1 den C-terminale aminosyre lysin fjernet enzymatisk ved hjælp af carboxypeptidase B (firma Boehringer Mannheim),Ha DK 5 DK 172818 B1 the C-terminal amino acid lysine enzymatically removed by carboxypeptidase B (company Boehringer Mannheim),

Det herved dannede fragment P12 kunne isoleres i ren form ved gelchromatografi på Sephadex G-25 (1% eddike** 5 syre). P12 består af følgende aminosyrer: Pro (1), Lan (1), Ø-Me-Lan (1), Fly (1), Ala (2), Ile (2), Phe (1),The fragment P12 thus formed could be isolated in pure form by gel chromatography on Sephadex G-25 (1% vinegar ** 5 acid). P12 consists of the following amino acids: Pro (1), Lan (1), Ø-Me-Lan (1), Fly (1), Ala (2), Ile (2), Phe (1),

Lys (1).List (1).

Svovlbroerne i thioetheraminosyrerne lanthionin og Ø-methyllanthionin forhindrer en sekvensanalyse 10 ifølge Edman. Ved omsætning af P12 med Raney-Ni W2 vindes et svovlfrit dodecapeptid. Herved overføres meso-Lan I D- og L-alanin, og Ø-methyllanthionin i D-amino-smørsyre og L-alanin. Dodecapeptid-sekvensen blev opklaret ved Edman-nedbrydning og FAB-spektrometri: 15 Ile1-Ala2-Ala3-Lys4-Phe5-Ile6-Ala7-Abu8-?ro9-Gly10-Ala1^-Ala12.The sulfur bridges in the thioether amino acids lanthionine and β-methyllanthionine prevent a sequence analysis 10 according to Edman. By reacting P12 with Raney-Ni W2, a sulfur-free dodecapeptide is obtained. Hereby, meso-Lan I D- and L-alanine, and β-methyllanthionine in D-amino-butyric acid and L-alanine are transferred. The dodecapeptide sequence was elucidated by Edman degradation and FAB spectrometry: 15 Ile1-Ala2-Ala3-Lys4-Phe5-Ile6-Ala7-Abu8-aro9-Gly10-Ala1-Ala12.

Forskellige undersøgelser vedrørende anbringelsen af svovlbroerne i fragment P12 viste følgende struktur: 20 I- S -1Various studies regarding the placement of the sulfur bridges in fragment P12 revealed the following structure: 20 I-S -1

Ile-Ala-Ala-Lys-Phe-Ile-Ala-Abu-Pro-Gly-Ala-AlaIle-Ala-Ala-Lys-Phe-Ile-Ala-Abu-Pro-Gly-Ala-Ala

!-s_I! -s_I

Det ved tryptisk spaltning vundne C-terminale brudstykke P2 kan karakteriseres som følger: Asn (1), 25The C-terminal fragment P2 obtained by tryptic cleavage can be characterized as follows: Asn (1), 25

Lan (1), Gly (1), Phe (1), Tyr (1), α-ketosmørsyre og S-(2-aminovinyl)-D-cystein.Lan (1), Gly (1), Phe (1), Tyr (1), α-keto butyric acid and S- (2-aminovinyl) -D-cysteine.

o-Ketosmørsyren stammer fra dehydroaminosmørsy-ren, der i totalmolekylets sekvens følger direkte efter lysin*3. Den tryptiske spaltning frigør aminogruppen 30 fra dehydroaminosmørsyren. Da dehydroaminosmørsyrer med frie aminogrupper er instabile, omlejres de blandt andet til σ-ketosyrer.The o-keto butyric acid is derived from the dehydroamino butyric acid, which in the sequence of the total molecule follows directly after lysine * 3. The tryptic cleavage releases the amino group 30 from the dehydroamino butyric acid. Since dehydroamino butyric acids with free amino groups are unstable, they are, for example, rearranged to σ-keto acids.

Det tryptiske fragment P2 er N-terminalt med a-ketosmørsyren blokeret (ninhydrinreaktion på P2 forløber 35 negativt). Foruden de ved totalhydrolyse og aminosyrea-nalyse identificerede aminosyrer lanthionin, glycin, phenylalanin, tyrosin og asparaginsyre indeholder P2 en 6 DK 172818 B1 yderligere bygningsdel, der ødelægges ved sur totalhydrolyse. Denne kunne karakteriseres ved hjælp af dens , signaler i ^C-NMR-spektrene for Epidermin (Fig.6) og j i fragmentet P2 (Fig.8).The tryptic fragment P2 is N-terminal with the α-keto butyric acid blocked (ninhydrin reaction to P2 advances negatively). In addition to the amino acids lanthionine, glycine, phenylalanine, tyrosine and aspartic acid identified by total hydrolysis and amino acid analysis, P2 contains an additional component which is destroyed by acidic total hydrolysis. This could be characterized by its signals in the C C-NMR spectra of Epidermin (Fig. 6) and j in the fragment P2 (Fig. 8).

5 En oplysning om den kemiske natur af denne amino syre fik man ved omsætning af P2 med Raney-Ni W2, hvor der opstod to hovedprodukter. Hos begge, ved præparativ HPLC isolerede produkter fandtes efter totalhydrolyse en yderligere D-alaninrest i aminosyrechromatogrammet, 10 hvilken rest opstod ved denne omsætning.5 An information on the chemical nature of this amino acid was obtained by reaction of P2 with Raney-Ni W2, in which two main products arose. In both products isolated by preparative HPLC, after total hydrolysis, an additional D-alanine residue was found in the amino acid chromatogram, which residue arose from this reaction.

Strukturen af denne bygningsdel kunne opklares ved heterogen hydrogenering af det native antibioticum.The structure of this building part could be resolved by heterogeneous hydrogenation of the native antibiotic.

De fire reaktionsprodukter Hl, H2, H3 og H4 blev renset ved semipræparativ HPLC, totalhydrolyseret og under-15 kastet gaschromatografi på chiral stationær fase (Fig.15).The four reaction products H1, H2, H3 and H4 were purified by semi-preparative HPLC, total hydrolyzed, and subjected to chiral stationary phase chromatography (Fig. 15).

Herved optrådte, sammenlignet med chromatogrammet i Fig.2, hos Hl og H3 en yderligere spids, der over dens massespektrum blev identificeret som S-(2-aminoethyl)-D-cystein. I Epidermin var denne aminosyre indeholdt 20 som syrelabil bygningsdel S-(2-aminovinyl)-D-cystein.Hereby, compared with the chromatogram of Fig. 2, at H1 and H3, an additional peak was identified which over its mass spectrum was identified as S- (2-aminoethyl) -D-cysteine. In Epidermin, this amino acid contained 20 as an acid-labile component S- (2-aminovinyl) -D-cysteine.

De to, ud fra det C-terminale brudstykke P2 ved behandling med Raney-nikkel W2 dannede peptider P21 og P22 kunne ved aminosyreanalyse og gaschromatografi på Chirasil-Val karakteriseres som følger: 25The two peptides P21 and P22 formed from the C-terminal fragment P2 by treatment with Raney nickel W2 could be characterized by amino acid analysis and gas chromatography on Chirasil-Val:

Reaktionsprodukter P21_ P22_Reaction products P21_ P22_

Aminosyreanalyse og gas- 2 D-Ala 1 D-Ala chromatografi på Chirasil-Val 1 L-Ala meso-Lan 1 L-Phe 1 L-Phe 30 1 L-Tyr 1 L-Tyr 1 L-Asp 1 L-Asp 1 Gly 1 GlyAmino acid analysis and gas 2 D-Ala 1 D-Ala chromatography on Chirasil-Val 1 L-Ala meso-Lan 1 L-Phe 1 L-Phe 30 1 L-Tyr 1 L-Tyr 1 L-Asp 1 L-Asp 1 Gly 1 Gly

Yderligere var begge produkter blokeret C-termi-25 nalt med ethylamin. S-(2-Aminovinyl)-D-cystein blev ved afsvovlning under samtidig hydrogenering spaltet i D-alanin og ethylamin.In addition, both products were blocked C-terminal with ethylamine. S- (2-Aminovinyl) -D-cysteine was cleaved in sulfurization under simultaneous hydrogenation in D-alanine and ethylamine.

lig Π tm 7 DK 172818 B1light DK tm 7 DK 172818 B1

Sekvensbestemmelse af det^ brofrie heptapeptid P21 (partialhydrolyse, 0,lN saltsyre, 93°C, 16 timer) viste følgende struktur: 5 H3C-CH2-CO-CO-Gly-D-Ala-L-Phe-L-Asn-D-Ala-L-Tyr-L-Ala-NHEtSequencing of the bridged heptapeptide P21 (partial hydrolysis, 0.1N hydrochloric acid, 93 ° C, 16 hours) showed the following structure: 5 H3C-CH2-CO-CO-Gly-D-Ala-L-Phe-L-Asn-D -Ala-L-Tyr-L-Ala-NHEt

Anbringelsen af den i P22 indeholdte meso-lan-thioninbro ifølge partialhydrolyse og diverse kemiske undersøgelser på enzymatiske fragmenter fra P21 og P22 var kun forenelig med følgende struktur for det ved tryptisk spaltning opståede fragment P2:The placement of the mesolan-thionine bridge contained in P22 according to partial hydrolysis and various chemical studies on enzymatic fragments of P21 and P22 was only compatible with the following structure for the tryptic cleavage fragment P2:

I s II s I

i c H,C-CH--CO-CO-Gly-Ala-Phe-Asn~Ala-Tyr-Ala-NH-CH 15 3 2 I || .i c H, C-CH - CO-CO-Gly-Ala-Phe-Asn ~ Ala-Tyr-Ala-NH-CH 15 3 2 I || .

\-S-CH\ -S-CH

Den formelle substitution af 2-ketosmørsyren, der blokerer P2 N-terminalen, med den i det native antibio-2ø ticum tilstedeværende aminosyre dehydrobutyrin oq en efterfølgende fragmentkondensation af de tryptiske peptider PI og P2 førte direkte til nedenstående sekvens for det heterodet tetracycliske peptidantibioticum Epi-dermin: ψ 8 DK 172818 B1The formal substitution of the 2-keto butyric acid which blocks the P2 N-terminus with the amino acid dehydrobutyrin present in the native antibody and a subsequent fragment condensation of the tryptic peptides PI and P2 directly led to the sequence below for the heterodetric tetracyclic peptide antibiotic dermin: DK 8 DK 172818 B1

Struktur af det ribosomalt syntetiserede, heterodet cy-cliske docosapeptidantibioticum Epiderroin: meso-Lar.thionin CK,-S -CH,Structure of the ribosomally synthesized heterocyclic cyclic docosapeptide antibiotic Epiderroin: meso-Lar.thionine CK, -S -CH,

I II I

H-Ile-Ale-NK-CK-CO-Lys-?he-Ile-NK-CK-CO— \ (S) (R) CK, β-MethyllanchioninH-Ile-Ale-NK-CK-CO-Lys-? He-Ile-NK-CK-CO— \ (S) (R) CK, β-Methyllanchionine

10 I10 I

(S) CH-S-:-CH,(S) CH-S -: - CH,

Ί IΊ I

L NK-CK-CO-Pro-Gly-HN-CK-CO-Ala-Lys- (S) (R) 15 - CH-, meso-Lanthionin i » CK CK,-S----CK, II I m I il» L-KN-C-CO-Gly-K.V-CK-CO-Phe-Asr.-KN-CK-CO-Tyr-KK-CE-CO-'KK-CK 20 (I) (S) I (R) ||L NK-CK-CO-Pro-Gly-HN-CK-CO-Ala-Lys- (S) (R) 15 - CH-, meso-lanthionine in »CK CK, -S ---- CK, II I m I il »L-KN-C-CO-Gly-KV-CK-CO-Phe-Asr.-KN-CK-CO-Tyr-KK-CE-CO-'KK-CK 20 (I) (S) I (R) ||

ch2-S--CKCH2-S - CK

S- (2-Amincvinyl) -D-cysteinS- (2-Aminquinyl) -D-cysteine

De N-terminalen nærmest-liggende halvdele af de 25 enkelte thioetheraminosyrer er hver D-konfigurerede (svarer til (S)-konfigurationen i R,S-nomenklaturen).The N-terminal adjacent halves of the 25 individual thioether amino acids are each D-configured (corresponding to the (S) configuration of the R, S nomenclature).

Opfindelsen angår således et homogent og dermed som rent betragtet produkt, betegnet Epidermln, og endvidere en fremgangsmåde til dets fremstilling, isole-30 ring og rensning.The invention thus relates to a homogeneous and thus purely considered product, referred to as Epidermin, and further to a process for its preparation, isolation and purification.

Dyrkningen af producenten Staphylococcus epider-midis DSM 3095 foregår aerobt ved 37°C i et kompleks-medium med sammensætningen 2-4% kødékstrakt, 1-3% maltekstrakt og 0,25-1% CaCOj eller 0,25-0,5% Ca(OH)2» 35 (Ved procentangivelserne er der her og i det følgende, såfremt ikke andet er angivet, tale om vægtprocenter).The cultivation of the producer Staphylococcus epider-midis DSM 3095 takes place aerobically at 37 ° C in a complex medium with the composition 2-4% meat extract, 1-3% malt extract and 0.25-1% CaCO 2 or 0.25-0.5% Ca (OH) 2 »35 (Unless otherwise indicated, the percentages refer to weight percentages here and below).

9 DK 172818 B19 DK 172818 B1

Maksimet for antibiotisk aktivitet nås efter 18-23 timer.The maximum for antibiotic activity is reached after 18-23 hours.

Forsøg på berigelse af antibioticum'et blev for eksempel foretaget på kulturfiltratet fra 10 liters 5 dyrkningsbeholdere, idet effektiviteten af de enkelte trin blev undersøgt ved pladediffusionstesten. De aktive komponenter kunne beriges ved ekstraktion af det for celler og kalk befriede kulturfiltrat med n-butanol. Ekstraktionen med n-butanol lykkedes imidlertid kun ved 10 det naturlige slut-pH for kulturfiltratet på 8,0. En yderligere rensning kunne opnås ved fraskillelse af li-pidiske ledsagestoffer ved etherfældning. Hertil blev butanolekstrakten inddampet, lnddampnlngsresten blev opløst i methanol og indrørt i en fem gange så stor mængde 15 kold diethylether. Aktiviteten forblev derved fuldstændigt i bundfaldet (Skema i FIg.9).For example, attempts to enrich the antibiotic were made on the culture filtrate from 10 liter 5 culture vessels, the effectiveness of the individual steps being tested in the plate diffusion test. The active components could be enriched by extracting the culture filtrate liberated from cells and lime with n-butanol. However, the extraction with n-butanol only succeeded at the natural final pH of the culture filtrate of 8.0. A further purification could be obtained by separating lipidic companions by ether precipitation. To this, the butanol extract was evaporated, the residue was dissolved in methanol and stirred in a five times the amount of 15 cold diethyl ether. The activity thus remained completely in the precipitate (Scheme in Fig. 9).

En særligt egnet fremgangsmåde til berigelse er også adsorption af det centrifugerede kulturfiltrat på Amberlite XAD-8 eller beslægtede typer af denne polymer 20 på acrylesterbasis (firma Serva). Vedhæftningen afA particularly suitable process for enrichment is also adsorption of the centrifuged culture filtrate on Amberlite XAD-8 or related types of this polymer 20 on acrylic ester basis (company Serva). The attachment of

Epidermin forgår herved ikke blot ved simpel adsorption, men ved kationbyttervirkning af frie acrylsyregrupper på harpiksen. Herfor taler det forhold, at de aktive komponenter kun kunne opløses fra harpiksen ved eluering 25 med me thanol/kone. HC1 (99:1). Det stærkt sure eluat skal før inddampningen i vakuum neutraliseres med ammoniak. Efter denne oparbejdning ved adsorption på Amberlite XAD-8 kunne der gives afkald på en efterfølgende omfældning af methanol/ether.Epidermin is thereby destroyed not only by simple adsorption, but by the cation exchange effect of free acrylic acid groups on the resin. This indicates that the active components could only be dissolved from the resin by elution with methanol / wife. HCl (99: 1). The highly acidic eluate must be neutralized with ammonia before evaporation in vacuo. After this reprocessing by adsorption on Amberlite XAD-8, a subsequent reaction of methanol / ether could be dispensed with.

30 En isolering af Epidermin ved adsorption kan og så foregå direkte i kulturvæsken allerede under dyrkningen af mikroorganismen.An isolation of Epidermin by adsorption can and does occur directly in the culture fluid already during the cultivation of the microorganism.

Stabilitetsteste og chromatografiske undersøgelser blev gennemført på lyofiliseret butanolekstrakt.Stability tests and chromatographic studies were performed on lyophilized butanol extract.

35 Inkubationen af ekstrakten med vandige opløsninger med forskellig pH-værdi gav fra pH 10 en stærk aftagen af aktivitet, men i området pH 2-7 er antibioticum'et stabilt.The incubation of the extract with aqueous solutions of different pHs resulted in a strong decrease in activity from pH 10, but in the range of pH 2-7 the antibiotic is stable.

10 DK 172818 B1 I tyndtlagschromatogrammet af den inddampede bu-tanolekstrakt fandtes adskillige, med forskellige sprøjtereagenser farvelige forbindelser, Parallet hermed gennemførte bioautogrammer gav vigtige oplysninger 5 om det hidtil ukendte aktive stofs natur. I sure og næsten alle neutrale systemer forbliver antibioticum'et ved tyndtlagschromatografi på silicagel 60 siddende ved start, mens chromatografi med alkalisk elueringsmiddel gav Rp-værdier mellem 0,3 og 0,75. Kombinationen af 10 bioautografi med tyndtlagschromatografi i alkaliske systemer viste en korrelation med en forbindelse, der kunne farves med ninhydrin.10 DK 172818 B1 In the thin layer chromatogram of the evaporated butanol extract there were several, with different spray reagents, colorful compounds, the pair of which carried out bioautograms giving important information 5 on the nature of the novel active substance. In acidic and almost all neutral systems, the antibiotic by thin layer chromatography on silica gel 60 remains seated at start, while chromatography with alkaline eluent yields Rp values between 0.3 and 0.75. The combination of 10 bioautography with thin layer chromatography in alkaline systems showed a correlation with a compound that could be stained with ninhydrin.

Som resultat af disse for-forsøg kunne det fastholdes, at antibiticum'et er et stærkt basisk peptid, 15 der unddrog sig en yderligere rensning ved søjlechroma-tografi på silicagel 60, da det ikke kunne elueres fra søjlen med sure eller neutrale systemer.As a result of these experiments, it could be maintained that the antibiticum is a highly basic peptide that avoided further purification by column chromatography on silica gel 60 as it could not be eluted from the column with acidic or neutral systems.

Chromatografi af Amberlite XAD-eluatet eller af den for lipider befriede butanolekstrakt på Sephadex 20 LH-20 med methanol/eddikesyre (95:5) skilte et stort antal små peptider, aminosyrer og salte, indeholdt i mediet, fra antibioticum'et (Skema Fig.9).Chromatography of the Amberlite XAD eluate or the lipid-free butanol extract on Sephadex 20 LH-20 with methanol / acetic acid (95: 5) separated a large number of small peptides, amino acids and salts contained in the medium from the antibiotic (Scheme Fig 0.9).

Ved den efterfølgende multiplikative modstrømsfordeling ifølge Craig kunne de ved ekstraktionen af 25 antibioticum'et fra kulturfiltratet gjorte erfaringer anvendes. I en første væske-væske-fordeling med systemet n-butanol/ethylacetat/0,lN eddikesyre (3:1:3) forblev antibioticum'et siddende ved start. Ved den anden Craig-fordeling med det neutrale system 2-butanol/0,05N 30 ammoniumacetat (1:1) fandt man antibioticum'et i midten af apparaturet. Ammoniumacetat kunne atter fjernes ved lyofilisering i højvakuum.In the subsequent multiplicative countercurrent distribution according to Craig, the experiences gained in extracting the antibiotic from the culture filtrate could be used. In a first liquid-liquid distribution with the system n-butanol / ethyl acetate / 0.1N acetic acid (3: 1: 3), the antibiotic remained seated at start. In the second Craig distribution with the neutral system 2-butanol / 0.05N 30 ammonium acetate (1: 1), the antibiotic was found in the center of the apparatus. Ammonium acetate could again be removed by lyophilization in high vacuum.

Epidermin foreligger efter frysetørring som et i alle anvendte tyndtlagssystemer homogent pulver.After freeze-drying, epidermin exists as a homogeneous powder in all thin-layer systems used.

35 Mens rensningen ved fremgangsmåden ifølge den i europæiske patentansøgning 0.027.710 foregik ved frys- I nings-optønings-ekstraktion, fordampning af ekstrakti- I onsmidlet, ultrafiltrering, fældning med ammoniumsulfat,While the purification of the process according to the European patent application 0.027.710 was carried out by freeze-thaw extraction, evaporation of the extraction agent, ultrafiltration, precipitation with ammonium sulphate,

Efl« 11 DK 172818 B1 ionbytter-chromatograf1 og gelfiltrering på Sephadex G-50 eller G-25 eller G-15 eller på Biogel P2, fører den omhandlede rensning til et homogent rent produkt ved adsorption af det centrifugerede kulturfiltrat på Amber-5 lite XAD-8, efterfulgt af en gelchromatografi på Sephadex LH-20 og derefter to gange modstrømsfordeling ifølge Craig. Isoleringen og rensningen ved fremgangsmåden i-følge ovennævnte europæiske patentansøgning og ifølge den omhandlede fremgangsmåde er således fuldstændigt 10 forskellige.Efl «11 DK 172818 B1 ion exchange chromatograph1 and gel filtration on Sephadex G-50 or G-25 or G-15 or on Biogel P2, the present purification leads to a homogeneously pure product by adsorption of the centrifuged culture filtrate on Amber-5 lite XAD -8, followed by a gel chromatography on Sephadex LH-20 and then twice countercurrent distribution according to Craig. Thus, the isolation and purification of the process according to the above-mentioned European patent application and according to the process according to the invention are completely different.

Yderligere forskelle fra den kendte fremgangsmåde ifølge ovennævnte EP-A-0.027.710 består i valget af den komplekse næringsopløsning. Mens den kendte næringsopløsning Hjerne-Hjerte-Infusion (37 g BHI/liter) kun 15 medførte et meget ringe antibioticum-udbytte, viste en næringsopløsning anvendt ifølge opfindelsen, bestående af 2-3% kødekstrakt, 1-3% sukker eller sukkeralkoholer, såsom maltekstrakt, maltose, galactose, lactose, mannit, glucose eller glycerol, og 0,25-1% calciumcar-20 bonat eller 0,25-0,5% calciumhydroxid, udmærkede resultater. Den bedste produktion blev opnået med en næringsopløsning med følgende sammensætning: 3% kødekstrakt, 2% maltekstrakt og 0,37% calciumhydroxid. Af alle C-kilder viste maltose efter maltekstrakt den bedste pro-25 duktion. Glucose skulle kun anvendes i forbindelse med andre C-kilder. Også kombinationen af lactose og maltose eller af galactose og maltose gav gode resultater. Alle andre sædvanlige C-kilder viste ingen eller kun en ringe produktion. Tilsætning af alle 20 aminosyrer som N-30 kilde i koncentrationer på 2 g/liter for hver bragte de samme resultater som kødekstrakten. Casaminosyre (firma Difco) egner sig som N-kilde kun ved tilsætning af tryptophan (l-2mM) og vitaminer. Som vitaminer egner sig (foretrukne koncentrationer i parentes): Biotin (0,006 35 mg/1), nicotinsyre (2,3 mg/1), thiamin (1,0 mg/1), py- rodoxin,HCl (12,0 mg/1), calciumpantothenat (1,2 mg/1).Further differences from the known process according to the above-mentioned EP-A-0.027.710 consist in the choice of the complex nutrient solution. While the known nutrient solution Brain-Heart Infusion (37 g BHI / liter) only resulted in very poor antibiotic yield, a nutrient solution used according to the invention, consisting of 2-3% meat extract, 1-3% sugar or sugar alcohols, such as malt extract, maltose, galactose, lactose, mannite, glucose or glycerol, and 0.25-1% calcium carbonate or 0.25-0.5% calcium hydroxide, excellent results. The best production was achieved with a nutrient solution of the following composition: 3% meat extract, 2% malt extract and 0.37% calcium hydroxide. Of all C sources, maltose after malt extract showed the best production. Glucose should only be used in conjunction with other C sources. The combination of lactose and maltose or of galactose and maltose also produced good results. All other usual C sources showed no or only poor production. Addition of all 20 amino acids as N-30 source at concentrations of 2 g / liter for each produced the same results as the meat extract. Casamic acid (company Difco) is suitable as an N source only by the addition of tryptophan (1-2mM) and vitamins. Suitable vitamins (preferred concentrations in parentheses): Biotin (0.006 35 mg / l), nicotinic acid (2.3 mg / 1), thiamine (1.0 mg / 1), pyrodoxine, HCl (12.0 mg / 1), calcium pantothenate (1.2 mg / l).

12 DK 172818 B112 DK 172818 B1

Dyrkningen foregår under god beluftning ved temperaturer mellem 34 og 37°C. Det bedste produktionsforløb opnås, når pH-værdien før dyrkningen ligger ved j 6,0-7,0. Ved fravar af carbonater eller hydroxider af 5 divalente kationer, såsom calciumcarbonat eller calcium-? hydroxid, finder der ingen produktion sted. Efter til sætning af for eksempel calciumcarbonat viser pH-værdi-en et karakteristisk forløb med fald ind i det sure område, og derved fandt ingen produktion sted. Ved påføl-10 gende stigning af pH-værdien ind i det svagt alkaliske område gik produktionen i gang. I stedet for calciumcarbonat kan der også anvendes magnesiumcarbonat, og calciumhydroxid gav bedre resultater end calciumcarbonat. Med 50 mM calciumhydroxid kunne produktionen sam-15 menlignet med 25 mM calciumcarbonat forøges noget. Ved stammens udnyttelse af C-kilder (sukker) sker der dannelse af organiske syrer, der kompleksdannes af bivalente kationer, hvorved der samtidigt sker en afpufring af mediet.Cultivation takes place under good aeration at temperatures between 34 and 37 ° C. The best production process is obtained when the pH before cultivation is at 6.0-7.0. In the absence of carbonates or hydroxides of 5 divalent cations, such as calcium carbonate or calcium? hydroxide, no production takes place. After adding, for example, calcium carbonate, the pH shows a characteristic course of decrease into the acidic region, and thus no production took place. With subsequent increase of the pH into the slightly alkaline range, production started. Instead of calcium carbonate, magnesium carbonate can also be used, and calcium hydroxide produced better results than calcium carbonate. With 50 mM calcium hydroxide, the production compared to 25 mM calcium carbonate could be increased somewhat. By utilizing the C sources (sugar) of the strain, organic acids are formed, which are formed by bivalent cations, thereby simultaneously buffering the medium.

20 I Fig.10 er vist resultaterne vedrørende forløbet af antallet af levende kim og antibioticum-produktionen, udtrykt i ram hamningsring over for Micrococcus luteus ATCC 9341, for de omhandlede medier sammenlignet med Hjerne-Hjerte-Infusionsmedium (firma Difco) ifølge oven-25 nævnte europæiske patentskrift.20 Fig. 10 shows the results regarding the course of the number of live germs and antibiotic production, expressed in ramification ring against Micrococcus luteus ATCC 9341, for the media in question compared with Brain-Heart-Infusion medium (company Difco) according to above-25 said European patent.

Ved hjælp af en justeringslinie fandtes ved pladediffusionstesten de nedenfor anførte aktivitetsstigninger på tidspunktet for produktionsmaksimum.By means of an adjustment line, the plate diffusion test found the activity increases listed below at the time of production maximum.

Aktiviteten i næringsopløsningen Hjerne-Hjerte-30 Infusion blev sat til 100%.Activity in the Nutrient Solution Brain-Heart-30 Infusion was set to 100%.

a) Hjerne-Hjerte-Infusionsagar 100% I b) 3% Kødekstrakt, 2% maltekstrakt, 25 mM calciumcarbonat 200% 35 c) 3% Kødekstrakt, 2% maltekstrakt, 50 mM calciumhydroxid 320% J.I -.iflf 13 DK 172818 B1a) Brain-Heart Infusion Agar 100% I b) 3% Meat Extract, 2% Malt Extract, 25 mM Calcium Carbonate 200% 35 c) 3% Meat Extract, 2% Malt Extract, 50 mM Calcium Hydroxide 320% J.I.iflf 13 DK 172818 B1

Disse angivelser viser ingen absolutte produktionsværdier. En sammenligning af de ved hjælp af pladediffusionstesten opnåede værdier viste imidlertid én-tydigt, at sammenlignet med den kendte arbejdsmetode op-5 nås ved anvendelse af fremgangsmåden ifølge opfindelsen en signifikant stigning af udbytterne.These indications show no absolute production values. However, a comparison of the values obtained by the plate diffusion test clearly showed that compared with the known working method 5, a significant increase in the yields is obtained using the method according to the invention.

Den til fremstilling af Epidermin anvendte stamme er af Schleifer & Kloos (Int.J.Syst.Bact.25, 50-61 (1975)) karakteriseret som nedenfor angivet: 10The strain used to prepare Epidermin is characterized by Schleifer & Kloos (Int.J.Syst.Bact.25, 50-61 (1975)) as follows: 10

Gramfarvning : positivGram staining: positive

Cellestørrelse j diameter 0,5-0,8 ymCell size j diameter 0.5-0.8 µm

Kolonistørrelse : ca.l mm diameterColony size: approx. 1 mm diameter

Koloniudseende : glat, skinnende, i midten ^ let ophøjetColony appearance: smooth, shiny, in the middle ^ slightly elevated

Kolonifarve : grålig-hvidColony color: greyish-white

Celler i kultur : ofte enkeltceller eller to sammen, sjældent større hobe 2Q Hæmolyse : på blodplader udstregede kulturer viste stærk hæmolyseCells in culture: often single cells or two together, rarely larger heap 2Q Hemolysis: stratified cultures showed strong hemolysis on platelets

Anaerob vækst : stammen vokser også under anaerobe betingelser 25 Lysozym-sensibilitet : cellerne er op til 2 mg/fol resistente over far lysozymAnaerobic growth: the strain also grows under anaerobic conditions 25 Lysozyme sensitivity: cells are up to 2 mg / fol resistant to far lysozyme

Lysostaphin-sensibilitet j cellerne er allerede ved 20 yg/ml sensibile over for lysostaphin 2Q Epidermin-Resistens : påvist op til 1 mg/mlLysostaphin sensitivity j cells are already sensitive to lysostaphin 2Q at 20 µg / ml Epidermin Resistance: detected up to 1 mg / ml

Andre resistenser : i væskekultur viser stam men en udpræget resistens over for Streptomycin (op til 1 mg/ ml) og Spectinanycin (0,5 mg/ 35 ml)Other resistances: in liquid culture, strain shows but a marked resistance to Streptomycin (up to 1 mg / ml) and Spectinanycin (0.5 mg / 35 ml)

Forhøjet NaCl-indhold : stammen vokser endnu godt ved 15 vægt% natriunchlorid.Elevated NaCl content: the strain still grows well at 15 wt% sodium chloride.

14 DK 172818 B114 DK 172818 B1

Kolonier eller udstregede kulturer er meget kla- i brige.Colonies or extinct cultures are very easy to reach.

Udnyttelsen af forskellige C-kilder under syre-> dannelse og andre enzymreaktioner blev bestemt ved hjalp 5 af Api-Staph-systemet (firma Biomerieux, NOrtingen).The utilization of various C sources during acid formation and other enzyme reactions was determined by aide 5 of the Api-Staph system (company Biomerieux, NOrtingen).

Dette system beror på en kombination af 20 biokemiske reaktioner, der kan føres tilbage til klassificeringen Ifølge KLOOS ft SCHLEIFER (J.Clin.Microbiol.This system is based on a combination of 20 biochemical reactions that can be traced back to the classification According to KLOOS ft SCHLEIFER (J. Clin. Microbiol.

1, 82-88 (1975)).1, 82-88 (1975)).

1010

Tabel ITable I

C-kildeudnyttelse og andre enzymreaktioner C-kilde eller enzym Pro- Staph. epid. Staph.epid.C source utilization and other enzyme reactions C source or enzyme Pro-Staph. epid. Staph.epid.

____dueer.t KioosfcSchleifer Aoi - Staph 15 Kontrol - D-Glucose + k.A. + D-Fructose + + + D-Mannose {+) (+) +____ dueer.t KioosfcSchleifer Aoi - Staph 15 Control - D-Glucose + k.A. + D-Fructose + + + D-Mannose {+) (+) +

Maltose + + +Maltose +++

Lactose (+) (+) + D-Trehalose - D-Mannitol - xylitol - D-Melibiose - k.A.Lactose (+) (+) + D-Trehalose - D-Mannitol - xylitol - D-Melibiosis - k.A.

Raffinose - k.A.Raffinose - k.A.

25 D-xylose -D-xylose -

Saccharose + + + "Ί Q- Methylelucesid - k.A.Sucrose + + + "Ί Q- Methyleluceside - k.A.

j N-Acetylglucosarin - k.A. +N-Acetylglucosarin - k.A. +

Nitratreduktion + ♦ * I ^ 3q Phosphatase + + +Nitrate Reduction + ♦ * I ^ 3q Phosphatase +++

Dannelse af acetylr.ethyl- + k.A. + carfcinol (Voces-?ros -.. kauerraaktion)Formation of acetylr.ethyl- + k.A. + carfcinol (Voces- ros - .. kauerraaction)

Areinindehydroiase - k.A. +Areinindehydroiase - k.A. +

Urease + k.A. + 35 _ rn 11 .....mUrease + K.A. + 35 _ rn 11 ..... m

«“'"WiliiiS' "'" WiliiiS

15 DK 172818 B1 + positiv reektion negativ reaktion (+) entydig positiv reaktion indtrader ferst noget senere + variabel egenskab 5 k. A. ingen angivelser15 DK 172818 B1 + positive reaction negative reaction (+) unambiguous positive reaction occurs later somewhat + variable property 5 k. A. no information

Stammen Staphylococcus epidermidis DSM 3095 blev podet over på små skrårør med et medium af følgende sammensætning: 10The strain Staphylococcus epidermidis DSM 3095 was seeded onto small incised tubes with a medium of the following composition:

Pepton 10 gPeptone 10 g

Dinatriumhydrophosphat 2 g Kødekstrakt 8 gDisodium hydrophosphate 2 g Meat extract 8 g

Glucose 10 g (separat autoklaveret)Glucose 10 g (separate autoclaved)

Natriumchlorid 3 g 15 pH 7,2 g derefter inkuberet natten over ved 37°C og til slut ind-frosset ved -20°C. Til nye forsøg blev altid et frisk rør optøet, da der ved længere tids lagring ved 4°C er 20 observeret aktivitetstab.Sodium chloride 3 g pH 7.2 g then incubated overnight at 37 ° C and finally frozen at -20 ° C. For new experiments, a fresh tube was always thawed as, with prolonged storage at 4 ° C, 20 activity losses were observed.

I det følgende er fremstillingen af det antibiotiske stof Epidermin omtalt nærmere.In the following, the preparation of the antibiotic drug Epidermin is discussed in more detail.

Dyrkningen kan gennemføres i dertil egnede rystekolber, men til fremstilling af større stofmængder 25 kan der anvendes en dyrkningsbeholder på 200 liter eller mere.The culture can be carried out in suitable shake flasks, but for the production of larger amounts of substance 25 a culture container of 200 liters or more can be used.

Til kolbeforsøg blev der anvendt 500 ml's Erlen-myerkolber med indstik i siden. Kolberne blev fyldt med 100 ml næringsopløsning og autoklaveret 20 minutter 30 ved 121°C. Som podemateriale tjente 1% af en 4 timer gammel forkultur. Inkubationen foregik ved 37°C på roterende rystemaskine ved 140 rpra.For flask experiments, 500 ml Erlen flask with side inserts were used. The flasks were filled with 100 ml of nutrient solution and autoclaved for 20 minutes 30 at 121 ° C. As seed material, 1% of a 4 hour old pre-culture served. The incubation was performed at 37 ° C on a rotary shaker at 140 rpra.

Til dyrkning i 10 liters målestok blev dyrkningsbeholdere med 10 liters nytteindhold (Model MF-14 New 35 Brunswick, Scientific Co., New Brunswick, USA) fyldt med 9,9 liter næringsopløsning og autoklaveret 30 minutter ved 134°C. Efter afkøling blev der podet med 100 ml 16 DK 172818 B1 af en 4 timer gammel forkultur og dyrket ved 37°C, 0,6 i wm og 240 rpm for bladomrøreren. Den relativt stærke , skumdannelse blev modvirket ved gentagen tilsætning af i steril polyol.For 10-liter culture, 10-liter culture vessels (Model MF-14 New 35 Brunswick, Scientific Co., New Brunswick, USA) were filled with 9.9 liters of nutrient solution and autoclaved for 30 minutes at 134 ° C. After cooling, 100 ml of a 4 hour old preculture was seeded with 100 ml of 16 culture and grown at 37 ° C, 0.6 in wm and 240 rpm for the blade stirrer. The relatively strong foaming was counteracted by repeated addition of sterile polyol.

. 5 Til dyrkning i 25 liters målestok blev en 25 li ters dyrkningsbeholder (type b 25, Braun/Melsungen med slagsystem) forsynet med 25 liter næringsopløsning under tilsætning af 3 ml polyol og steriliseret ved 121°C i 30 minutter. Som podemateriale tjente 300 ml af 10 en 4 timer gammel forkultur. Dyrkningen foregik ved 37°C, 0,6 wm og 1000 rpm.. 5 For 25-liter culture, a 25-liter culture vessel (type b 25, Braun / Melsungen with sorting system) was provided with 25 liters of nutrient solution with the addition of 3 ml of polyol and sterilized at 121 ° C for 30 minutes. As seed material, 300 ml of 10 served a 4-hour old culture. The cultivation took place at 37 ° C, 0.6 wm and 1000 rpm.

Forløbet af en dyrkning i 10 liters målestok i en næringsopløsning, indeholdende 30 g kødekstrakt, 20 g maltekstrakt og 5 g calciumcarbonat i 1 liter, er vist 15 i Fig.ll. Intensiv vækst forbundet med udnyttelse af de tilbudte C-kilder under syredannelse kan ses af pH-vær-diens fald. Med alkaliseringens start kan antibioti-cum’et påvises i kulturfiltratet. Produktionen når sit maksimum efter 12-18 timer.The progress of a 10 liter scale cultivation in a nutrient solution containing 30 g of meat extract, 20 g of malt extract and 5 g of calcium carbonate in 1 liter is shown in Fig. 11. Intensive growth associated with utilization of the C sources offered during acidification can be seen by the decrease in pH. At the start of the alkalization, the antibiotic can be detected in the culture filtrate. Production reaches its maximum after 12-18 hours.

20 Til kontrol af dyrkningsforløbet blev der på forskellige tidspunkter under dyrkningen udtaget prøver sterilt. Prøverne blev vurderet for følgende: a) pH-Værdis Måling med et labor-pH-meter (Knick pH-mV-meter).20 To control the course of cultivation, samples were taken sterile at various times during cultivation. The samples were evaluated for the following: a) pH-Value Measurement with a laboratory pH meter (Knick pH-mV meter).

25 b) vækstforløb: Væksten kunne følges gennem stigningen i antallet af 1 levende kim. Hertil blev 0,5 ml sterilt udtaget kultur j fortyndet i saltopløsning, og heraf blev 0,1 ml ud- pladet på plader (medium; pepton 10 g, kødekstrakt 8 g, natriumchlorid 3 g, dinatriumhydrophosphat 2 g, glucose 10 g, til 1 liter). Efter 18 timers inkubation ved 37°C kunne enkeltkolonierne tælles, c) Antibioticum-koncentration:25 b) Growth course: Growth could be followed by the increase in the number of 1 live germs. To this, 0.5 ml of sterile culture culture was diluted in brine, of which 0.1 ml was plated on plates (medium; peptone 10 g, meat extract 8 g, sodium chloride 3 g, disodium hydrophosphate 2 g, glucose 10 g, to 1 liter). After 18 hours of incubation at 37 ° C, the single colonies could be counted; c) Antibiotic concentration:

Prøverne blev centrifugeret i en Eppendorf-centrifuge 3200 i 2 minutter, og 20 yl af supernatanten blev testet ved pladediffusionstesten.The samples were centrifuged in an Eppendorf centrifuge 3200 for 2 minutes, and 20 µl of the supernatant was tested by the plate diffusion test.

Parallelt blev der frembragt en justeringskurve med kendte koncentrationer.In parallel, an adjustment curve of known concentrations was produced.

7s ' ΪΪ 17 DK 172818 B17s' ΪΪ 17 DK 172818 B1

Efter at produktionsmaksimet var nået, blev kulturvæsken centrifugeret ved kontinuerlig centrifugering (centrifuge: Type LA 71b-4, Loher & Sohne, Ruhstorf/After reaching the production maxima, the culture liquid was centrifuged by continuous centrifugation (centrifuge: Type LA 71b-4, Loher & Sohne, Ruhstorf /

Rott) med 1380 rpm. Hed henblik på optimal cellefra-5 skillelse skulle passagehastigheden holdes meget lav.Rat) at 1380 rpm. For optimum cell separation, the passage rate should be kept very low.

En første berigelse af de aktive komponenter blev, ved hjælp af den ovenfor omtalte adsorption på Amberlite XAD-8, opnået ifølge nedenstående Eksempel 1.An initial enrichment of the active components was obtained by the above-mentioned adsorption on Amberlite XAD-8, according to Example 1 below.

10 Eksempel 1 80 liter Kulturfiltrat blev hældt over ca. 8 liter Amberlite XAD-8. I gennemløbet kunne der ikke påvises nogen aktivitet. Ved efterfølgende vask med vand blev der heller ikke elueret nogen aktivitet. Derefter 15 blev der vakset med 13 liter methanol. I vaskevandet blev der ikke påvist nogen aktivitet. Elueringen foregik med methanol/saltsyre 99:1, hvorved der vandtes følgende fraktioner: 2q "Fraktion 1: 0,8 liter aktivExample 1 80 liters Culture filtrate was poured over approx. 8 liter Amberlite XAD-8. No activity could be detected during the passage. On subsequent washing with water, no activity was also eluted. Then 15 were added with 13 liters of methanol. No activity was detected in the wash water. The elution was carried out with methanol / hydrochloric acid 99: 1 to give the following fractions: 2q "Fraction 1: 0.8 liters active

Fraktion 2: 4,5 liter HovedaktivitetFraction 2: 4.5 liters Main activity

Fraktion 3: 2 liter aktivFraction 3: 2 liters active

Fraktion 4: 2 liter ingen aktivitetFraction 4: 2 liters no activity

Fraktion 5: 1 liter ingen aktivitet 25Fraction 5: 1 liter no activity 25

Fraktionerne blev testet tyndtlagschromatografisk for deres indhold af Epidermin, hvorefter de aktive fraktioner blev samlet og inddampet til tørhed på rotationsfordamper (81,2 g), inddampningsresten blev optaget i methanol/eddikesyre (95/5) (400 ml), uopløseligt mate-30 riale blev fracentrifugeret, og portioner på hver 50 ml blev gelchromatograferet på Sephadex LH-20 (søjle 100x5 cm, elueringsmiddel methanol/eddikesyre 95:5). Positive fraktioner blev samlet og inddampet (14,8 g).The fractions were tested thin-layer chromatographically for their content of Epidermin, then the active fractions were pooled and evaporated to dryness on a rotary evaporator (81.2 g), the residue was taken up in methanol / acetic acid (95/5) (400 ml), insoluble matter 30 rial was centrifuged and portions of each 50 ml were gel chromatographed on Sephadex LH-20 (column 100x5 cm, eluent methanol / acetic acid 95: 5). Positive fractions were collected and evaporated (14.8 g).

Til multiplikativ fordeling ifølge Craig anvend-35 tes apparturer fra firmaet Labortec (Basel). En første adskillelse gennemførtes med et 50 ml*s apparatur i systemet n-butanol/ethylacetat/Ο,ΙΜ eddikesyre (3/1/3).For multiplicative distribution, according to Craig, appliance from the company Labortec (Basel) is used. An initial separation was performed with a 50 ml * s apparatus in the system n-butanol / ethyl acetate / Ο, ΙΜ acetic acid (3/1/3).

Den i den nedre fase (100 ml) opløste prøve (5 g) blev i 18 DK 172818 B1 underkastet følgende adskillelsesbetingelser; I Trintal: 160 5 Rystebevægelser/trin: 70 ' 5 Rysteintensitet: 45 • Adskillelsestid: 20 min.The sample (5 ml) dissolved in the lower phase (5 g) was subjected to the following separation conditions in 18 DK 172818 B1; In Trintal: 160 5 Shaking movements / steps: 70 '5 Shaking intensity: 45 • Separation time: 20 min.

Til den endelige rensning blev det vundne råprodukt (4,2 g) i portioner på hver 2 g opløst i den nedre fase af systemet 2-butanol/0,05N ammoniumacetat (50 ml) 10 og renset i et 10 ml's apparatur med 440 elementer.For the final purification, the crude product obtained (4.2 g) in portions of each 2 g was dissolved in the lower phase of the system 2-butanol / 0.05N ammonium acetate (50 ml) 10 and purified in a 10 ml apparatus with 440 elements .

Trintal: 440Trine number: 440

Rystebevægelser/trin: 50Shaking movements / steps: 50

Rysteintensitet: 50Shaking intensity: 50

Adskillelsestid: 10 min.Separation time: 10 min.

De Epidermin-holdige elementer blev samlet, inddampet, optaget i vand og lyofiliseret flere gange i højvakuum. Det antibiotiske stof (2,6 g) viste sig homogent ved alle foretagne undersøgelser.The Epidermin-containing elements were collected, evaporated, taken up in water and lyophilized several times in high vacuum. The antibiotic (2.6 g) was found to be homogeneous in all studies performed.

2020

Under fremstillingen og isoleringen af Epidermi-net anvendtes pladediffusionstesten til den biologiske karakterisering, nemlig både til optagelse af virknings-spektret og til kontrol af produktion, oparbejdning og berigelse. Testen blev, som beskrevet af Zåhner og Haas, 25 Biology of antibiotics (Springer Verlag, Berlin-Heidel-berg-New York, 1972), gennemført i Petriskåle fra firma Greiner, Nurtingen, med filterrondeller med en diameter på 6 mm (Machetey & Nagel, Diiren) . Filterrondellerne blev befugtet med 20 yl af den pågældende test-30 væske, tørret ved stuetemperatur på en glasplade og anbragt på testpladerne. Testpladerne blev inkuberet ved 37°C, og efter ca. 16 timer blev væksthæmningen vurderet .During the manufacture and isolation of the Epidermi net, the plate diffusion test was used for the biological characterization, namely both for recording the spectrum of effect and for controlling production, processing and enrichment. The test, as described by Zåhner and Haas, 25 Biology of antibiotics (Springer Verlag, Berlin-Heidelberg-New York, 1972), was conducted in Petri dishes from Greiner, Nurtingen, with 6 mm diameter filter rounds (Machetey & Nail, Diiren). The filter rounds were wetted with 20 µl of the test liquid in question, dried at room temperature on a glass plate and placed on the test plates. The test plates were incubated at 37 ° C and after ca. At 16 hours, growth inhibition was assessed.

Som rutinetestkim tjente Streptococcus pyogenes 35 ATCC 8668 og, på grund af dens problemløse håndtering, Micrococcus luteus ATCC 9341.As a routine test germ, Streptococcus pyogenes 35 ATCC 8668 and, because of its problem-free handling, served Micrococcus luteus ATCC 9341.

IH SKIIH SKI

! Ti r Ti 19 DK 172818 B1! Ti r Ti 19 DK 172818 B1

Testpladerne med Streptococcus pyogenes ATCC 8668: Før fremstilling af testpladerne måtte testkimen podes frisk over på blodplader med mucin (medium: 500 ml agar pH 7,4, 160 ml mucinopløsning (10 vægti), 3,5 5 ml glucoseopløsning (50 vægti), 70 ml bedeblod).The test plates with Streptococcus pyogenes ATCC 8668: Before preparation of the test plates, the test germ had to be germinated fresh on platelets with mucin (medium: 500 ml agar pH 7.4, 160 ml mucin solution (10 wt), 3.5 5 ml glucose solution (50 wt), 70 ml bed blood).

Efter 15-18 timers inkubation ved 37°C blev der fremstillet en saltopløsningssuspension (E^g 0,5) , og 1 ml af denne suspension blev pipetteret til 100 ml næringssubstrat (medium: pepton 10 g, kødekstrakt 8 g, 10 natriurochlorid 3 g, Na2HP04 2 g, glucose 10 g til 1 liter, pH 7,2). De udhældte plader af 10 ml's portioner var holdbare nogle dage ved 4°C.After 15-18 hours of incubation at 37 ° C, a saline suspension (E ^g 0.5) was prepared and pipetted into 100 ml of nutrient substrate (medium: peptone 10g, meat extract 8g, 10 sodium chloride 3). g, Na 2 HPO 4 2 g, glucose 10 g to 1 liter, pH 7.2). The poured plates of 10 ml portions were durable for some days at 4 ° C.

Testplader med Micrococcus luteus ATCC 9341:Test plates with Micrococcus luteus ATCC 9341:

En kultur fra natten over (medium: pepton lo g, 15 kødekstrakt 8 g, natriumchlorid 3 g, Na2HP04 2 g, glucose 10 g til 1 liter, pH 7,2) blev fortyndet til en ekstinktion på 1,0 ved 578 nm. Med 0,25 ml af denne suspension blev 100 ml agar podet, og 10 ml*s plader blev udhældt. Testpladerne kunne opbevares flere dage 20 ved 4°C.An overnight culture (medium: peptone 10 g, 15 meat extract 8 g, sodium chloride 3 g, Na 2 HPO 4 2 g, glucose 10 g to 1 liter, pH 7.2) was diluted to an extinction of 1.0 at 578 nm. With 0.25 ml of this suspension, 100 ml of agar was seeded and 10 ml * s plates were poured. The test plates could be stored for 20 days at 4 ° C.

Testplader til virkningsspektret:Test plates for the spectrum of effect:

Testplader med bakterier: a) Aerobt levende bakterier:Bacteria test plates: a) Aerobically live bacteria:

Kulturer fra natten over indførtes i de pågældende 25 testmedier, og pladerne blev fremstillet, som be skrevet for Micrococcus luteus ATCC 9341.Overnight cultures were introduced into the respective 25 test media and the plates prepared as described for Micrococcus luteus ATCC 9341.

8) Aanaerobt levende bakterier:8) Anaerobic live bacteria:

Forkulturerne for Clostridium pasteurianum ATCC 6013 og Propionibacterium aenes DSM 1897 blev indført i 30 reagensglas, der til fortrængning af oxygenet blev fyldt med næringsopløsning op til vatproppen.The precultures of Clostridium pasteurianum ATCC 6013 and Propionibacterium aenes DSM 1897 were introduced into 30 test tubes filled with nutrient solution up to the cotton plug to displace the oxygen.

Med 3 ml forkultur blev 100 ml agar podet, og 10 ml' s plader blev udhældt.With 3 ml of pre-culture, 100 ml of agar were seeded and 10 ml of plates were poured.

Inkubationen foregik i Anaerobier-Topf (BBL-Gas Pak 35 100, Becton, Dickinson GmbH, Heidelberg) ved den i hvert enkelt tilfælde optimale temperatur.The incubation took place in Anaerobier-Topf (BBL-Gas Pak 35 100, Becton, Dickinson GmbH, Heidelberg) at the optimum temperature in each case.

20 DK 172818 B120 DK 172818 B1

Testplader med gæragtigt voksende svampe: I rystekultur blev cellerne fremdyrket i det pågældende testmedium i 18-20 timer. Efter tælling iTest plates with yeast-growing fungi: In shake culture, cells were cultured in the test medium in question for 18-20 hours. After counting in

Thoma-tællekammer blev testpladerne podet i en tæthed 5 på 106 organismer/ml agar.Thoma counting chamber, the test plates were seeded at a density of 106 organisms / ml of agar.

Testplader med svampe og Streptomyceter:Test plates with fungi and Streptomyceter:

Testorganismerne blev fremdyrket på små skrårør (medium:gærekstrakt 4 g, maltekstrakt 10 g, glucose 4 g til 1 liter) ved de pågældende temperaturer indtil 10 sporulation. Sporerne blev bortskyllet med 3 ml salt-opløsning-Tween 80 (1 dråbe Tween 80 til 100 ml saltopløsning) og indhældt i testplader.The test organisms were cultured on small swab (medium: yeast extract 4 g, malt extract 10 g, glucose 4 g to 1 liter) at the relevant temperatures until 10 sporulation. The spores were rinsed with 3 ml of saline-Tween 80 (1 drop of Tween 80 to 100 ml of saline) and poured into test plates.

Stoffet Epidermin har en udmærket antibakteriel aktivitet. Det virker navnlig godt over for en lang 15 række grampositive bakterier. Den antibakterielle virkning af Epidermin blev undersøgt ved sammenligning med virkningen af Nlsin (Nisin,jfr. blandt andet tysk Aus-legeschrift DE-A-2.000.818 eller britisk patentskrift GB-B-1.182.156). Por nogle vigtige, klinisk relevante 20 kim anvendtes der til sammenligning også fusidinsyre. Aktiviteten fandtes ved hjælp af pladediffusionstesten og ved bestemmelse af de minimale hæmningskoncentrationer.The drug Epidermin has an excellent antibacterial activity. It works particularly well against a wide range of gram-positive bacteria. The antibacterial effect of Epidermin was examined by comparison with the action of Nlsin (Nisin, cf., among others, German Ausleglegrift DE-A-2,000,818 or British Patent GB-B-1,182,156). For some important, clinically relevant 20 germs, fusidic acid was also used for comparison. The activity was found by the plate diffusion test and by determining the minimum inhibition concentrations.

a) Pladediffusionstest: 25 Ved pladediffusionstesten blev sensibiliteten af forskellige mikroorganismer over for Epidermin og Nisin testet. Tabel II viser, at begge antibiotica næsten udelukkende virker på grampositive bakterier. Der anvendtes Nisin med en aktivitet på 4000 enheder.a) Plate diffusion test: 25 In the plate diffusion test, the sensitivity of various microorganisms to Epidermin and Nisin was tested. Table II shows that both antibiotics work almost exclusively on gram-positive bacteria. Nisin with an activity of 4000 units was used.

, 30, 30

Tabel IITable II

Sensibilitet over for Epidermin og Nisin. Angivelser i mm hæmningsring, koncentrationer 1 mg/ml og 0,5 mg/ml.Sensitivity to Epidermin and Nisin. Indications in mm inhibition ring, concentrations 1 mg / ml and 0.5 mg / ml.

"i· 21 DK 172818 B1”i · 21 DK 172818 B1

Mikroorganismer Dyrkningsbetingelser Epidermin NisinMicroorganisms Culture conditions Epidermin Nisin

Temp. Medium 1 0,5 1 0,5Temp. Medium 1 0.5 1 0.5

Bakterier ^ Eubacteriales, grampositivBacteria ^ Eubacteriales, gram positive

Arthrobacter aureseens 27®C 5 8 Sp 9 8Arthrobacter aureseens 27®C 5 8 Sp 9 8

Arthrobacter crystallopoietes 27®C 5 16 15 16 15Arthrobacter crystallopoietes 27®C 5 16 15 16 15

Arthrobacter globiformis 27®C 5 14 12 14 13Arthrobacter globiformis 27®C 5 14 12 14 13

Arthrobacter oxydens 27eC 5 12 11 11 10 10 Arthrobacter pascens 27eC 5 13 12 14 13Arthrobacter oxydens 27eC 5 12 11 11 10 10 Arthrobacter pascens 27eC 5 13 12 14 13

Bacillus cereus 37®C 3 8 SpBacillus cereus 37®C 3 8 Sp

Bacillus pumilus 37eC 4 14 12 12 10Bacillus pumilus 37eC 4 14 12 12 10

Bacillus subtilis ATCC 6051 37®C 4 12 11 9 8Bacillus subtilis ATCC 6051 37®C 4 12 11 9 8

Bacillus subtilis ATCC 6051 37®C 6 17 16 14 12 15 Bacillus subtilis ATCC 6633 37®C 4 14 11 9 8Bacillus subtilis ATCC 6051 37®C 6 17 16 14 12 15 Bacillus subtilis ATCC 6633 37®C 4 14 11 9 8

Bacillus subtilis F 24-2 37°C 4 13 11 8 SpBacillus subtilis F 24-2 37 ° C 4 13 11 8 Sp

Bacillus subtilis A 14 37®C 4 12 10 9 SpBacillus subtilis A 14 37®C 4 12 10 9 Sp

Brevibacterium flavum 37®C 4 11 10 8 7Brevibacterium flavum 37®C 4 11 10 8 7

Clostridium pasteurianum 30®C 7 17 15 14 13Clostridium pasteurianum 30 ° C 7 17 15 14 13

Clostridium sporogenes 37®C 8 10 ' 9 8 SpClostridium sporogenes 37®C 8 10 '9 8 Sp

Corynebacterium spec. 27eC 4 15 13 9 8Corynebacterium spec. 27C 4 15 13 9 8

Corynebacterium insidiosum 27eC 4 19 17 10 8Corynebacterium insidiosum 27eC 4 19 17 10 8

Corynebacterium rathayi 27®C 4 14 12 10 9Corynebacterium rathayi 27®C 4 14 12 10 9

Micrococcus luteus ATCC 381 27eC 5 10 9Micrococcus luteus ATCC 381 27eC 5 10 9

Micrococcus luteus ATCC 9341 27®C 2 21 20 17 16 25 Propionibacterium aenes 37"C 8 22 19 21 18Micrococcus luteus ATCC 9341 27®C 2 21 20 17 16 25 Propionibacterium aenes 37 "C 8 22 19 21 18

Sarcir.a lutea 37®C 5 15 14 15 14Sarcir.a lutea 37®C 5 15 14 15 14

Staphylococcus aureus Tu 202 37eC 4 13 10 10 9Staphylococcus aureus Tu 202 37eC 4 13 10 10 9

Staphylococcus aureus DSM 683 37®C 4 11 9 Sp -Staphylococcus aureus DSM 683 37®C 4 11 9 Sp -

Staphylococcus aureus Pen.res 37®C 4 12 11 9 8Staphylococcus aureus Pen.res 37®C 4 12 11 9 8

Staphylococcus cohnii 37®C 2 14 12 9 -Staphylococcus cohnii 37®C 2 14 12 9 -

Streptococcus pyogenes 37®C 2 22 20 18 17Streptococcus pyogenes 37®C 2 22 20 18 17

Eubacteriales, gramnegativ:Eubacteriales, gram negative:

Proteus mirabilis 37*C 4 11 9 9 7 35 Proteus vulgaris 37®C 5 9 8 8 Sp 22 DK 172818 B1Proteus mirabilis 37 * C 4 11 9 9 7 35 Proteus vulgaris 37®C 5 9 8 8 Sp 22 DK 172818 B1

Actinomycetales:Actinomycetales:

Streptomyces glaucescens 27*C 3 10 8 10 9 j Streptomyces violaceoruber 37*C 3 9 8-- 5 Streptomyces vicido- 37*C 3 11 10 98 cbromogenes (”) betyder, at der ikke indtrådte nogen virkning Sp « spor 10 b) Minimal hæmningskoncentration:Streptomyces glaucescens 27 * C 3 10 8 10 9 j Streptomyces violaceorubes 37 * C 3 9 8-- 5 Streptomyces vicido- 37 * C 3 11 10 98 cbromogenes (") means that no effect Sp" track 10 b) Minimum inhibitory concentration:

Den minimale hæmningskoncentration for klinisk relevante kim, angivet i yg/ml, blev i mikrotiterplader testet i følgende medium: 25 5 ml Na-Lactat, 5 g Na2SO^r 0,5 g KI^PO^, 0,1 gThe minimum inhibitory concentration for clinically relevant germs, expressed in µg / ml, was tested in microtiter plates in the following medium: 25 ml of Na-Lactate, 5 g of Na 2 SO 4 0.5 g KI

MgClj, 5 g NH4C1, 10 g glucose, 50 yg calciumpantothe-nat, 50 yg thiamin, 0,25 yg folsyre, 50 yg Niacin, 25 yg p-aminobenzoesyre, 50 yg pyridoxin-hydrochlorid, 25 yg riboflavin i 1000 ml destilleret vand, 20 1 tabel III er vist de minimale hæmningskoncen trationer (ug/ml) af Epidermin og til sammenligning Nisin og fusidinsyre. Det anvendte Nisin havde en aktivitet p& 2500 enheder.MgCl₂, 5 g NH4 Cl, 10 g glucose, 50 g calcium pantothenate, 50 g thiamine, 0.25 g folic acid, 50 g niacin, 25 g p-aminobenzoic acid, 50 g pyridoxine hydrochloride, 25 g riboflavin in 1000 ml distilled water Table 1 shows the minimum inhibitory concentrations (µg / ml) of Epidermin and for comparison Nisin and fusidic acid. The Nisin used had an activity of & 2500 units.

25 Tabel IIITable III

Minimal hamningskoncentration i yg/ml:Minimum residue concentration in µg / ml:

Epidermin Fusidinsyre NisinEpidermin Fusidic Acid Nisin

St. eoidermidls WG 99_ 2_ 4_128 30 Sc. pvooenes ATCC 8668_0.125__1_4St. eoidermidls WG 99_ 2_ 4_128 30 Sc. pvooenes ATCC 8668_0.125__1_4

Sc. pneumoniae ATCC 6302_2 16 32Sc. pneumoniae ATCC 6302_2 16 32

Me. luteus ATCC 159S7_0,25_0j_5_16Me. luteus ATCC 159S7_0.25_0j_5_16

Hc. luteus ATCC 9341_-< 0,06 _0_l5_8Hc. luteus ATCC 9341 _- <0.06 _0_l5_8

Cb. xerosis NCTC 9755_0,125__0,125_16 35 E.~ coli ATCC 11775_128__>128_>128 E. coll ATCC 9637_128_>128_>128Cb. xerosis NCTC 9755_0,125__0,125_16 35 E. ~ coli ATCC 11775_128 __> 128_> 128 E. coll ATCC 9637_128_> 128_> 128

Propionib. aenes PC 904_0.06 . 0,5_32Propionib. aenes PC 904_0.06. 0,5_32

Propionib. aenes ATCC 25746 0,25 1 64 •i i 23 DK 172818 B1Propionib. aenes ATCC 25746 0.25 1 64 • i i 23 DK 172818 B1

De i Tabel II nævnte medier er beskrevet nedenfor. Medierne blev efter indstilling af pH-værdien autoklaveret 20 minutter ved 121°C.The media listed in Table II are described below. After adjusting the pH, the media was autoclaved for 20 minutes at 121 ° C.

Mængdeangivelserne angår altid 1 liter vand. Ved 5 kemisk definerede medier anvendtes dedoniseret vand.The quantity declarations always refer to 1 liter of water. With 5 chemically defined media, dedonized water was used.

Medium: (2) Glucose-agar-medium:Medium: (2) Glucose agar medium:

Pepton 10 g Kødekstrakt 8 g 10 NaCl 3 gPeptone 10 g Meat extract 8 g 10 NaCl 3 g

Na2HP04 2 gNa2HPO4 2 g

Glucose 10 g (separat autoklaveret)Glucose 10 g (separate autoclaved)

Agar 20 g pH 7,2 15 (3) Gær-malt-medium: Gærekstrakt 4 gAgar 20 g pH 7.2 (3) Yeast malt medium: Yeast extract 4 g

Maltekstrakt 10 gMalt extract 10 g

Glucose 4 g 20 A?ar 20 9 pH 7,3 (4) Oxoid-medium for bakterier: Kødekstrakt 10 gGlucose 4 g 20 Years 20 9 pH 7.3 (4) Oxide medium for bacteria: Meat extract 10 g

Pepton 10 g 25 " NaCl 5 gPeptone 10 g 25 "NaCl 5 g

Agar 20 g PH 7,2 (5) Næringsvæske 8 g 30 (Firma Difco)Agar 20 g PH 7.2 (5) Nutrient Fluid 8 g 30 (Company Difco)

Agar 20 g PH 7,2 (6) Minimalmedium for bakterier (HOTTER et al., 1966): 35 D-Glucose 8 gAgar 20 g PH 7.2 (6) Minimum medium for bacteria (HOTTER et al., 1966): 35 D-Glucose 8 g

Di-ammoniumtartrat 4 g 24 DK 172818 B1Di-ammonium tartrate 4 g 24 B1

NaCl 5 g K2HP04 2 gNaCl 5 g K2HPO4 2 g

MgS04 X 7 H20 1 g 1 CaCl2 0,2 g 5 MnSo^ x H20 0,01 gMgSO 4 x 7 H 2 O 1 g 1 CaCl 2 0.2 g 5 MnSO 4 x H 2 O 0.01 g

Ferrioxamin B 0,02 gFerrioxamine B 0.02 g

Agar 20 g pH 7,2 (7) Medium for Clostridium pasteurianum: Kødekstrakt 3 g Gærekstrakt 3 gAgar 20 g pH 7.2 (7) Medium for Clostridium pasteurianum: Meat extract 3 g Yeast extract 3 g

Maltekstrakt 3 gMalt extract 3 g

Pepton 20 g D-Glucose 5 gPeptone 20 g D-Glucose 5 g

Ascorbinsyre 0,2 gAscorbic acid 0.2 g

Agar 20 g ™ pH 7,0 (8) Brewer thioglycolatmedium for Propionibacterlum 20 aenes:Agar 20 g ™ pH 7.0 (8) Brewer thioglycolate medium for Propionibacterlum 20 aenes:

Thioglycolatmedium 40,5 g Agar 20 g pH 7,2 25 Epidermin tåles udmærket, og ved topisk anven delse er der ikke observeret nogen toxisk aktivitet.Thioglycolate medium 40.5 g Agar 20 g pH 7.2 Epidermin is well tolerated and no topical activity has been observed in topical use.

Det er en stor fordel, at den resistente mutant Staphylococcus epldermidis DSM 3095 er resistent over for det af mutanten producerede Epidermin. Stammen NCIB 30 11536 har ikke en sådan resistens over for det af denne stamme producerede lavmolekylære antibiotieum. j Den hidtil ukendte klon DSM 3095 vandtes på føl gende måde:It is a great advantage that the resistant mutant Staphylococcus epldermidis DSM 3095 is resistant to the epidermin produced by the mutant. The strain NCIB 30 11536 has no such resistance to the low molecular weight antibiotic produced by this strain. j The novel clone DSM 3095 was won as follows:

Adaptationen gennemførtes i 100 ml1s Erlenmeyer-35 kolber med sideværts indstik og 10 ml næringsopløsning 25 DK 172818 B1 (Hjerne-Hjerte-Infusion). Startkulturen blev podet med 0,5 ml af en 12 timer gammel kultur. Til kolberne, der indeholdt stigende Epidermin-koncentrationer, tjente som podemateriale 0,5 ml af den hver gang forudgående, 5 godt groede kultur. Vurderingen af væksten foregik fotometrisk ved 578 nm. Kulturen, der ved en koncentration på 1,0 mg/ml af Epidermin i vsskekultur, endnu var groet godt, blev fortyndet i saltopløsning og udpladet på en plade, hvori der var indhældt 0,5 mg/ml af Epidermin.The adaptation was carried out in 100 ml side Erlenmeyer 35 flasks with lateral insert and 10 ml nutrient solution 25 (Brain-Heart-Infusion). The starting culture was seeded with 0.5 ml of a 12 hour old culture. To the flasks containing increasing Epidermin concentrations, 0.5 ml of the each preceding 5 well-grown culture served as seed material. The growth assessment was performed photometrically at 578 nm. The culture, which, at a concentration of 1.0 mg / ml of liquid culture, was still well grown, was diluted in saline and plated on a plate containing 0.5 mg / ml of Epidermin.

10 Som sammenligningsværdi blev en ufortyndet 12 timer gammel kultur af den fra litteraturen kendte sammenlignings s tamme NCIB 11536 udpladet. Efter 24 timers inkubation ved 37°C viste der sig hos den til 10”® fortyndede adapterede kultur 94 enkeltkolonier. Den på plader 15 indeholdende 0,15 mg/ml af Epidermin ufortyndet udpla-dede sammenligningsstamme voksede stadig ikke efter 48 timers inkubation. De resistente kolonier blev udvalgt og udstreget i raster på plademedium 2. Efter en for-test for produktion ved udstikning af stykker med 20 en diameter på 5 mm og aktivitetstest på Micrococcus luteus ATCC 9341 blev producerende kloner testet i væskeroedium.10 As a comparison value, an undiluted 12 hour old culture of the comparative known NCIB 11536 from the literature was plated. After 24 hours of incubation at 37 ° C, 94 single colonies appeared in the 10 ° ® diluted adapted culture. The diluted plated comparative strain on plates 15 containing 0.15 mg / ml of Epidermin still did not grow after 48 hours of incubation. The resistant colonies were selected and screened in plate medium 2. After a pre-test for production by 20 mm diameter cut-outs and activity tests on Micrococcus luteus ATCC 9341, producing clones were tested in liquid medium.

Sammenligning af den resistente stamme med den fra 25 litteraturen kendte stamme: a) Minimal hæmningskoncentration ved pladediffusionstest: På testplader ned de to stanmer fandtes de i Tabel IV anførte'minimale hæmningskoncentrationer.Comparison of the resistant strain with the strain known in the literature: a) Minimal inhibition concentration by plate diffusion test: On test plates down the two strains, the minimal inhibition concentrations listed in Table IV were found.

30 Tabel IVTable IV

Minimale hæmningskoncentrationer af Epidermin ved pladediffusionstest med NCIB 11536 og DSM 3095.Minimum inhibitory concentrations of Epidermin in plate diffusion testing with NCIB 11536 and DSM 3095.

Stamme^ pg/ml 35 ---- NCIB 11536 10 DSM 3095 > 1000 26 DK 172818 B1 b)__Vækst_02_produktign: Vækst- og produktionsforløb for de to stammer blev sammenlignet i næringsopløsning (3% kødekstrakt, ! 2% maltekstrakt, 0,37% Ca(0H)2). Se Pig. 12.Strain ^ pg / ml 35 ---- NCIB 11536 10 DSM 3095> 1000 26 DK 172818 B1 b) __ Growth_02_productign: Growth and production progress of the two strains were compared in nutrient solution (3% meat extract, 2% malt extract, 0.37 % Ca (OH) 2). See Pig. 12th

5 Vækstforløb: Bestemmelse af antal levende kim5 Growth course: Determination of number of live germs

Produktionsforløb: Aktivitet over for Micrococcus luteus ATCC 9341 ved pladediffusionstest.Production course: Activity against Micrococcus luteus ATCC 9341 by plate diffusion test.

Hos den resistente stamme observeres en bedre produktion.In the resistant strain, better production is observed.

1010

Sl_.§SSSifeiiitS£-2JiS£_l2E_5Ei§S£lSi2»i-.f2£§l£§iii9§_Y5lSSi“ faser:Sl_.§SSSifeiiitS £ -2JiS £ _l2E_5Ei§S £ lSi2 »i-.f2 £ §l £ §iii9§_Y5lSSi“ phases:

Forsøgene med egenhæmning af producentstammen med antibiocum'et og undersøgelsen af de udvalgte klo-15 ners resistens gennemførtes i biofotometer (Eppendorf-fotometer med cirkulationsautomat).The self-inhibition experiments of the producer strain with the antibiocum and the study of the resistance of the selected clones were carried out in a biophotometer (Eppendorf photometer with circulator).

Disse forsøg kunne gennemføres detaljeret for eksempel som følger: A„f en 12 timer gammel kultur af Staphylococcus 20 epidermidis NCIB 11536 eller af den udvalgte resistente stamme DMS 3095 blev hver gang 0,5 ml podet over på frisk medium.These experiments could be carried out in detail, for example, as follows: A 12 hour old culture of Staphylococcus 20 epidermidis NCIB 11536 or of the selected resistant strain DMS 3095 was each grafted 0.5 ml onto fresh medium.

Disse kulturer fik lov at vokse højt Indtil en ekstinktion på 0,043 ved 578 nm (kuvetter med en lagtyk-25 kelse på 1 cm), hvorefter de blev fordelt i portioner på 7,5 ml i biofotometerets kuvetter (lagtykkelse 2 cm).These cultures were allowed to grow high up to an extinction of 0.043 at 578 nm (cuvettes with a layer thickness of 1 cm), after which they were distributed in 7.5 ml aliquots in the biophotometer cuvettes (layer thickness 2 cm).

Tætheden af cellesuspensionen blev i biofoto-meteret indstillet på en transmission på 90%. Inkuba-30 tionen foregik ved 37°C og med maksimal beluftning.The density of the cell suspension was adjusted to a 90% transmission in the bio-photometer. The incubation took place at 37 ° C and with maximum aeration.

Epidermin blev i form af vandig opløsning tilsat i forskellige vækstfaser.Epidermin was added in the form of aqueous solution at various growth stages.

Ved begge stammer blev der til at begynde med og i midten af den logaritmiske fase tilsat forskel-35 lige Epidermin-koncentrationer. Resultaterne er vist i fig. 13 og 14.At both strains, different Epidermin concentrations were added initially and in the middle of the logarithmic phase. The results are shown in FIG. 13 and 14.

Med de hidtil testede koncentrationer kunne der hos den resistente stamme ikke observeres nogen •iWith the concentrations tested so far, no • i could be observed in the resistant strain

AA

27 DK 172818 B1 lysis.27 DK 172818 B1 lysis.

Det omhandlede antibioticum Epidermin udøver, ligesom den kulturvaske, hvorfra det er isoleret, en baktericid virkning, der fører til lysis af cellerne.The antibiotic Epidermin in question, like the culture wash from which it is isolated, exerts a bactericidal effect that leads to lysis of the cells.

5 Hvad angår den baktericide virkning og det brede virkningsspektrum over for grampositive bakterier er det omhandlede polypeptid-antibioticum Epidermin særligt aktivt ved behandling af infektioner, der er forårsaget af grampositive bakterier. Epidermin er 10 særligt værdifuldt til bekæmpelse af hudinfektioner, såsom eksem, impetigo, cellulitis og navnlig acne.As regards the bactericidal action and the broad spectrum of action against gram-positive bacteria, the subject polypeptide antibiotic Epidermin is particularly active in the treatment of infections caused by gram-positive bacteria. Epidermin is particularly valuable for combating skin infections such as eczema, impetigo, cellulitis and especially acne.

Den udmærkede aktivitet over for nogle vigtige Propioni-bakterium-acnes-stammer er vist i tabellerne II og III.The excellent activity against some important Propioni bacterium acnes strains is shown in Tables II and III.

Det kan siges, at Epidermin, der normalt fremstilles 15 af organismer, som koloniserer den menneskelige hud, udøver bedre aktivitet i henseende til beskyttelse af huden end andre sædvanlige antibiotics.It can be said that Epidermin, normally produced by organisms that colonize the human skin, exerts better activity in protecting the skin than other usual antibiotics.

De ovennævnte farmaceutiske præparatformer, der indeholder det omhandlede antibioticum sammen med 20 farmaceutisk sædvanlige hjælpestoffer og bærestoffer, kan anvendes oralt, parenteralt, enteralt eller topisk.The aforementioned pharmaceutical formulations containing the antibiotic of this invention together with 20 pharmaceutically usual adjuvants and carriers can be used orally, parenterally, enterally or topically.

Sådanne præparatformer, men navnlig topiske præparatformer, kan foreligge som opløsninger, emulsioner, geler, lotioner, salver, cremer eller puddere.Such formulations, but especially topical formulations, may be present as solutions, emulsions, gels, lotions, ointments, creams or powders.

25 De følgende eksempler viser fremstilling af så danne farmaceutiske anvendelsesformer.The following examples show the preparation of such pharmaceutical uses.

Eksempel 2Example 2

Tinktur 30 I 100 g tinktur er indeholdtsTincture 30 In 100 g of tincture is contained

Epidermin 1,0 gEpidermin 1.0 g

Ethanol (94,5 vol%) 56,0 g 1,2-propylenglycol 40,0 gEthanol (94.5 vol%) 56.0 g 1,2-propylene glycol 40.0 g

Demineraliseret vand 3,0 g 35Demineralized water 3.0 g 35

Fremstilling:Preparation:

Epidermin opløses i blandingen af ethanol/1,2-propylenglycol/vand, hvorefter opløsningen steriliseres.The epidermin is dissolved in the ethanol / 1,2-propylene glycol / water mixture and the solution is sterilized.

DK 172818 B1 28DK 172818 B1 28

Eksempel 3Example 3

Lotion I 100 g lotion er indeholdt: i Epidermin 1,00 g 5 1,2-propylenglycol 7,00 gLotion I 100 g lotion contains: in Epidermin 1.00 g 5 1,2-propylene glycol 7.00 g

Alkyldimethylbenzylammpnium-chlorid (Benzalkon A®) 0,15 gAlkyldimethylbenzylammonium chloride (Benzalkon A®) 0.15 g

Sorbitanmonopalmitat (Splan 40 ®) 0,40 gSorbitan monopalmitate (Splan 40 ®) 0.40 g

Sorbitamacrogolpalmitat 10 (Tween 40 ® ) 1,20 g 01iesyredecylester (Cetiol V ® ) 2,40 gSorbitam Acrogol Palmitate (Tween 40 ®) 1.20 g of Acetic Acid Decyl Ester (Cetiol V ®) 2.40 g

Blanding af cetyl- og λ stearylalkohol (Lanette 0 ^ 1,60 gMixture of cetyl and λ stearyl alcohol (Lanette 0 ^ 1.60 g

Cetylplamitat 0,80 g 15 Demineraliseret vand til 100 gCetylplamitate 0.80 g Demineralized water to 100 g

Fremstilling:Preparation:

De ovennævnte mængder af alkyldimethylbenzyl-ammoniumchlorid, sorbitanmonopalmitat, sorbimacrogol-plamitat, oliesyredecyleter, cetyl- og stearylalkohol 20 og cetylplamitat indrøres i 75 ml vand, den filtrerede opløsning af Epidermin i 1,2-propylenglycol og det resterende vand indføres, og tinkturen homogeniseres.The above-mentioned amounts of alkyl dimethylbenzyl ammonium chloride, sorbitan monopalmitate, sorbimacrogol plamitate, oleic acid decyl ether, cetyl and stearyl alcohol 20 and cetylplamitate are stirred in 75 ml of water, the filtered solution of Epidermine is dissolved in water and 1,2-propylene glycol.

Eksempel 4 2 5 Gel 100 g Gel indeholder:Example 4 Gel 5 100 g Gel contains:

Epidermin 9Epidermin 9

Polyethylenglycolether af laurylalkohol (Brij 35® ) 1,0 g 1,2-propylenglycol 5,0 g 30 Acrylsyrepolymerisat (Carbopol 934 ®) 1,2 g p-Hydroxybenzoesyremethylester 1,6 g p-Hydroxybenzoesyrepropylester 0,4 gPolyethylene glycol ether of lauryl alcohol (Brij 35®) 1.0 g of 1,2-propylene glycol 5.0 g of Acrylic Acid Polymerize (Carbopol 934 ®) 1.2 g of p-Hydroxybenzoic acid methyl ester 1.6 g of p-Hydroxybenzoic acid propyl ester 0.4 g

Parfume q.s.Perfume q.s.

35 Natronlud til pH 6,5Sodium liquor to pH 6.5

Demineraliseret vand til 100 g i • 4Demineralized water to 100 g in • 4

.....J..... J

29 DK 172818 B129 DK 172818 B1

Fremstilling:Preparation:

De ovennævnte mængder af hjælpemidler indrøres i 75 ml vand. Epiderminet opløses i en blanding af 1,2- propylenglycol og det resterende vand, og denne opløs-5 ning indrøres ligeledes. Den færdige gel homogeniseres yderligere.The aforementioned amounts of auxiliaries are stirred in 75 ml of water. The epidermin is dissolved in a mixture of 1,2-propylene glycol and the remaining water, and this solution is also stirred. The finished gel is further homogenized.

TegnlnqsforklarInger:TegnlnqsforklarInger:

Fig. 1: Aminosyrechromatogram for det sure totalhydro- 10 lysat af Epidermin; Ninhydrin-farvning, λ = 570 nm.FIG. 1: Amino acid chromatogram for the Epidermin acidic total hydrolyzate; Ninhydrin staining, λ = 570 nm.

Fig. 2: Gaschromatogram for N-pentafluorpropionyl- aminosyre-n-propylesteren af det sure total-hydrolysat af Epidermin på Chirasil-Val.FIG. 2: Gas chromatogram for the N-pentafluoropropionyl-amino acid-n-propyl ester of the acidic total hydrolyzate of Epidermin on Chirasil-Val.

15 Temperaturprogram: 3 min. 85°C isotermt, der efter 4°C/min. til 200°C. Bæregas H2 (0,92 bar).Temperature program: 3 min. 85 ° C isotherm, which after 4 ° C / min. to 200 ° C. Carrier gas H2 (0.92 bar).

Fig. 3: UV-Spektrum for Epidermin i vand, pH 3 (C * 0,15 mg/ml).FIG. 3: UV spectrum of Epidermin in water, pH 3 (C * 0.15 mg / ml).

20 Fig. 4: IR-Spektrum for Epidermin i en kaliumbromid- tablet.FIG. 4: IR spectrum of Epidermin in a potassium bromide tablet.

Fig. 5: ^H-NMR-spektruro for Epidermin (20 mg/0,5 ml D~-dimethylformamid, 400,16 MHz).FIG. 5: 1 H NMR spectroscopy of Epidermin (20 mg / 0.5 ml of D 1 -dimethylformamide, 400.16 MHz).

Fig. 6: l'c-NMR-spektrum for Epidermin (40 mg/0,5 ml 25 12C, 2H-dimethylformamid, 100,6 MHz, 45360 impulser).FIG. 6: 1'C NMR spectrum of Epidermin (40 mg / 0.5 ml of 12C, 2H-dimethylformamide, 100.6 MHz, 45360 pulses).

Fig. 7: HPLC-Chromatogram for Epidermin på u Bondapak (300x3,9 mm). Mobil fase: A * acetoni-tril/0,01M KH2P04 (10/90), B » acetonitril/ 30 0,01M KH2P04 (70/30); lineær gradient fra 10% B til 100% B på 30 minutter, strømningshastighed 2 ml/min.FIG. 7: HPLC Chromatogram for Epidermin on u Bondapak (300x3.9 mm). Mobile phase: A * acetonitrile / 0.01M KH2PO4 (10/90), B »acetonitrile / 0.01M KH2PO4 (70/30); linear gradient from 10% B to 100% B in 30 minutes, flow rate 2 ml / min.

Fig. 8: ^c-NMR-spektrum for fragmentet P2 (12 mg/0,5 ml 12C, 2H-dimethylformamid, 100,6 MHz, 35 38300 impulser).FIG. Δ C NMR spectrum of the fragment P2 (12 mg / 0.5 ml of 12 C, 2H-dimethylformamide, 100.6 MHz, 38300 pulses).

Fig. 9: Isolering af Epidermin.FIG. 9: Isolation of Epidermin.

Fig. 10: Sammenligning af medierne i henseende til antal levende kim (fulde linier) og aktivitet 30 DK 172818 B1 over for Micrococcus luteus (stiplede linier), ▲ Hjerne-Hjerte-Infusion o 3% kødekstrakt, 2% maltekstrakt, 0,25% CaCO^ • 3% kødekstrakt, 2% maltekstrakt, 0,37% 5 Ca (OH) 2 >FIG. 10: Comparison of media in terms of number of live germs (full lines) and activity 30 DK 172818 B1 versus Micrococcus luteus (dashed lines), ▲ Brain-Heart Infusion o 3% meat extract, 2% malt extract, 0.25% CaCO ^ • 3% meat extract, 2% malt extract, 0.37% 5 Ca (OH) 2>

Fig. 11: Forløb af en dyrkning i 10 liters målestok • pH-Forløb A- Antal levende kim o Aktivitet over for Streptococcus pyogenes 10 ATCC 8668.FIG. 11: Progress of cultivation on a 10 liter scale • pH Course A- Number of live germs o Activity towards Streptococcus pyogenes 10 ATCC 8668.

Fig. 12: Sammenligning af fra litteraturen kendt stam me og resistent klon DMS 3095 i henseende til antal levende kim (fulde linier) og aktivitet over for Mikrococcus luteus ATCC 9341 (stip-15 lede linier).FIG. 12: Comparison of strain known and resistant clone DMS 3095 in terms of number of live germs (full lines) and activity against Micrococcus luteus ATCC 9341 (dotted lines).

o Stamme kendt fra litteraturen Æ. Resistent klono Tribe known from literature Æ. Resistant clone

Fig. 13: Epidermintilsætning i forskellige vækstfaser for Staphylococcus epidermidis NCIB 11536: 20 Kurve 1: Normalt vækstforløbFIG. 13: Epidermin addition at different growth stages for Staphylococcus epidermidis NCIB 11536: 20 Curve 1: Normal growth course

Kurve 2: Tilsætning af 10 yg/ml Epidermin ved begyndelsen af den logaritmiske fase fører til lysis.Curve 2: Addition of 10 µg / ml Epidermin at the beginning of the logarithmic phase leads to lysis.

Kurve 3: Tilsætning af 10 yg/ml Epidermin ved 25 midten af den logaritmiske fase fører lige ledes til lysis.Curve 3: Addition of 10 µg / ml Epidermin at the middle of the logarithmic phase leads straight to lysis.

Kurve 4: Tilsætning af 2,5 yg/ml Epidermin ved midten af den logaritmiske fase fører, til vækstforhaling.Curve 4: Addition of 2.5 µg / ml Epidermin at the middle of the logarithmic phase leads to growth retardation.

30 Fig. 14: Epidermintilsætning i forskellige vækstfaser for resistent klon DSM 3095:FIG. 14: Epidermal Addition in Different Growth Phases for Resistant Clone DSM 3095:

Kurve 1: Normalt vækstforløb, identisk med stammen NCIB 11536.Curve 1: Normal growth course, identical to strain NCIB 11536.

Kurve 2: Tilsætning af 120 yg/ml Epidermin 35 ved begyndelsen af den logaritmiske fase medfører kun en ringe vækstforhaling.Curve 2: Addition of 120 µg / ml Epidermin 35 at the beginning of the logarithmic phase results in only a slight growth delay.

Kurve 3: Tilsætning af 360 yg/ml Epidermin ved midten af den logaritmiske fase fører 31 DK 172818 B1 også her kun til en vækstforhaling.Curve 3: Addition of 360 µg / ml Epidermin at the middle of the logarithmic phase also leads here only to a growth retardation.

Fig. 15: Gaschromatogram for N-pentafluorpropionyl- aminosyre-n-propylesteren af totalhydrolysatet af Hl på Chirasil-Val. Temperaturprogram: 5 3 min. 80°C isotermt, derefter 4°c/min.FIG. 15: Gas chromatogram for the N-pentafluoropropionylamino acid-n-propyl ester of the total hydrolyzate of H1 at Chirasil-Val. Temperature program: 5 3 min. 80 ° C isothermal, then 4 ° C / min.

til 200°C, bæregas Hj.to 200 ° C, carrier gas Hj.

Claims (9)

32 DK 172818 B132 DK 172818 B1 1. Natur: Farveløst pulver.1. Nature: Colorless powder. 1. Antibiotisk aktivt polypeptid, betegnet Epidermin, kendetegnet ved« at det har følgende aminosyresammensætning: Asn (1), Pro (1)» Gly 5 (2), Ala (2), Ile (2)» Phe (2)« Lys (2), Lan (2), β- Me-Lan (1), Dhb (1), Tyr (1), S-(2-aminovinyl)-D-cystein (1) med følgende primærstruktur: meso-Lanthionin CH,- S - CH, I I H-Ile-Ala-NH-CE-CO-Lys-Phe-Ila-NH-CH-CO— (S) (R>An antibiotic active polypeptide, designated Epidermin, characterized in that it has the following amino acid composition: Asn (1), Pro (1) »Gly 5 (2), Ala (2), Ile (2) 'Phe (2)' Light (2), Lan (2), β-Me-Lan (1), Dhb (1), Tyr (1), S- (2-aminovinyl) -D-cysteine (1) with the following primary structure: meso-Lanthionine CH , - S - CH, II H-Ile-Ala-NH-CE-CO-Lys-Phe-Ila-NH-CH-CO - (S) (R> 15 CH, fl-Methyllanthionin (S)CH-S-CH, Ί I UNK-CH-CO-Pro-Gly-HN-CH-CO-Ala-Lys- (S) (R> 20 ~_ <pH 3 meso-Lanthionin CH CK,- S -CH, || (SI I (2) -HN-C-CO-Gly-HN-CK-CO-Phe-Asn-KN-CE-CO-Tyr-HN-CH-CO-NE-CH 25 (Z) (S) I (£) || CK2-S - CH , S- (2-Aminovinyl)-D-cystein i hvorhos de nærmest N-terminus beliggende halvdele af j de enkelte thioetheraminosyrer hver har D-konfigura- 30 tion.CH, f1-Methyllanthionine (S) CH-S-CH, Ί I UNK-CH-CO-Pro-Gly-HN-CH-CO-Ala-Lys- (S) (R> 20 ~ _ <pH 3 meso -Lanthionine CH CK, - S -CH, || (SI I (2) -HN-C-CO-Gly-HN-CK-CO-Phe-Asn-KN-CE-CO-Tyr-HN-CH-CO -NE-CH 25 (Z) (S) I (£) || CK2-S - CH, S- (2-Aminovinyl) -D-cysteine in which the nearest N-terminus halves of the individual thioether amino acids each have D configuration. 2. Opløselighed: Meget godt opløseligt i blandinger af vand/iseddike eller methanol/iseddike, opløseligt i lavere alkoholer, uopløseligt i chloroform, acetone, diethylether, petroleumsether.2. Solubility: Very well soluble in mixtures of water / glacial acetic acid or methanol / glacial acetic acid, soluble in lower alcohols, insoluble in chloroform, acetone, diethyl ether, petroleum ether. 2. Epidermin ifølge krav 1« kendetegnet ved, at det har følgende yderligere parametre:' 35 3» 33 DK 172818 B1Epidermin according to claim 1, characterized in that it has the following additional parameters: '35 3' 33 DK 172818 B1 3. Fremgangsmåde til fremstilling, isolering og rensning af det antibiotiske stof Epidermin, ifølge krav 1 eller 2, kendetegnet ved, at Staphylococcus epidermidis DSM 3095 dyrkes aerobt ved 34-37°C i en kompleks næringsopløsning bestående af 35 2-4% af en nitrogenkilde, såsom kødekstrakt, 1-3% af et sukker eller en sukkeralkohol som carbonkilde og 0,25-1% af et carbonat og/eller 0,25-0,5% af et hydroxid af et jordalkalimetal, hvorefter kulturvxsken, efter 34 DK 172818 B1 fjernelse af cellerne og uorganiske salte, til isolering af det dannede aktive stof, enten ekstraheres med n-butanol ved pH 8, hvorefter butanolekstrakten inddampes, inddampnlngsresten opløses i methanol, og 5 opløsningen ved etherfældning befries for de lipidiske ledsagestoffer, eller behandles med polymere på acryl-ester eller polystyren-basis, hvorhos det adsorberede Epidermin opløses fra harpiksen med methanol/konc. saltsyre (99:1), hvorefter opløsningen neutraliseres 10 med ammoniak og inddampes i vakuum, og de således vundne isolater til fraskillelse af yderligere lav-molekylære peptider, aminosyrer og salte gelchromato-graferes (Sephadex LH-20 med methanol/eddikesyre (95:5)) og derefter underkastes en multiplikativ 15 modstrømsfordeling ifølge Craig, ved hvilken der først foretages en væske-væske-fordeling med systemet n-butanol/ethylacetat/Ο,ΙΝ eddikesyre (3:1:3), hvorved Epidermin forbliver siddende ved start, og derefter ved en anden fordeling med det neutrale system 2-20 butanol/0,05N ammoniumacetat (1:1) opnås isolering af det rene Epidermin, og Epiderminet isoleres i form af farveløst pulver fra eluatet ved frysetørring.Process for the preparation, isolation and purification of the antibiotic Epidermin, according to claim 1 or 2, characterized in that Staphylococcus epidermidis DSM 3095 is aerobically grown at 34-37 ° C in a complex nutrient solution consisting of 2 to 4% of a nitrogen source, such as meat extract, 1-3% of a sugar or sugar alcohol as carbon source and 0.25-1% of a carbonate and / or 0.25-0.5% of a hydroxide of an alkaline earth metal, after which the culture growth, after 34 B1 removal of the cells and inorganic salts, to isolate the active substance formed, is either extracted with n-butanol at pH 8, then the butanol extract is evaporated, the residue is dissolved in methanol, and the solution by ether precipitation is freed from the lipidic companions, or treated. with acrylic ester or polystyrene-based polymers, wherein the adsorbed Epidermin is dissolved from the methanol / conc. hydrochloric acid (99: 1), whereupon the solution is neutralized with ammonia and evaporated in vacuo, and the thus obtained isolates are separated to separate further low molecular peptides, amino acids and salt gel chromatographs (Sephadex LH-20 with methanol / acetic acid (95: 5)) and then subjected to a multiplicative countercurrent distribution according to Craig in which a liquid-liquid distribution is first made with the system n-butanol / ethyl acetate / Ο, ΙΝ acetic acid (3: 1: 3), leaving Epidermin sitting at start and then by another distribution with the neutral system 2-20 butanol / 0.05N ammonium acetate (1: 1), isolation of the pure Epidermin is obtained and the Epidermin is isolated in the form of colorless powder from the eluate by freeze-drying. 3. Farvereaktion på silicagelplader: Ninhydrin, chlor/ TDM= 4,4'-bis-(dimethylamino)diphenylmethan), or-cin/svovlsyre, anisaldehyd/svovlsyre. Ødelæggelses-fri påvisning i UV-lys ved 254 nm og ved sprøjtning med vand.3. Color reaction to silica gel plates: Ninhydrin, chlorine / TDM = 4,4'-bis (dimethylamino) diphenylmethane), orcin / sulfuric acid, anisaldehyde / sulfuric acid. Destruction-free detection in UV light at 254 nm and by spraying with water. 4. Fremgangsmåde ifølge krav 3, kendetegnet ved, at der i dyrkningsmediet som nitrogen- 25 kilde indføres 2-4 vægts af en kødekstrakt, en blanding af alle 20 aminosyrer i aminosyre-koncentrationer på 2 g/liter for hver, eller 2-4% casamlnosyre i nærværelse af tryptophan, som carbonkilde indføres 1-3 vægt% maltekstrakt, maltose, galactose, lactose, mannit, 30 glucose, glycerol eller kombinationer af lactose med , maltose eller af galactose med maltose, endvidere 0,25-1 vægt% calciumcarbonat eller 0,25-0,5 vægt% calcium-hydroxid, og eventuelt yderligere tilsættes vitaminer, såsom biotin, nicotinsyre, thiamin, pyridoxin,HC1 og 35 calciumpantothenat, og pH-værdien før dyrkningen indstilles på 6,0-7,0, og produktionsforløbet følges ved løbende prøveudtagninger.Process according to claim 3, characterized in that 2-4 weight of a meat extract is introduced into the culture medium as nitrogen source, a mixture of all 20 amino acids at amino acid concentrations of 2 g / liter for each, or 2-4 % casamic acid in the presence of tryptophan to which carbon source is introduced 1-3% by weight malt extract, maltose, galactose, lactose, mannite, glucose, glycerol or combinations of lactose with, maltose or galactose with maltose, furthermore 0.25-1% by weight calcium carbonate or 0.25-0.5% by weight of calcium hydroxide, and optionally further vitamins such as biotin, nicotinic acid, thiamine, pyridoxine, HCl and calcium pantothenate are added and the pH before cultivation is adjusted to 6.0-7.0 , and the production process is followed by continuous sampling. 4. Tyndtlagschromatografi: Der anvendtes silicagel- færdigplader 60 F254 (Merc^) System A: Chloroform/methanol/17% ammoniak (2/2/1) RF = 0,73 System B: Chloroform/methanol/17% ammoniak (70/35/10) RF = 0,30 System C: n-Butanol/iseddeke/vand (4/1/1) RF = 0,054. Thin-layer chromatography: Silica gel finished plates 60 F254 (Merc ^) System A: Chloroform / methanol / 17% ammonia (2/2/1) RF = 0.73 System B: Chloroform / methanol / 17% ammonia (70 / 35/10) RF = 0.30 System C: n-Butanol / ice blanket / water (4/1/1) RF = 0.05 5. Epidermin vundet ved fremgangsmåden ifølge 35 DK 172818 B1 krav 3.The epidermin obtained by the method of claim 3. 5. HPLC: Se Fig.7.5. HPLC: See Fig. 7. 6. Epidermin-frems ti Ilende og over for Epldennin resistent stamme# Staphylococcus epidermidis DSM 3095.6. Epidermin-derived Ten Mating and Epldennine-resistant strain # Staphylococcus epidermidis DSM 3095. 6. Stabilitet: Stabilt fra pH52 til pH=7, ved højere pH-værdier indtræder stærkt aktivitetsfald.6. Stability: Stable from pH52 to pH = 7, at higher pH values, strong activity decline occurs. 7. Stapylococcus epidermidis DSM 3095# 5 kendetegnet ved# at den har følgende karakteristika: Gramfarvning s positiv Cellestørrelse : diameter 0,5-0,8 ym Kolonistørrelse : ca.l mm diameter 10 Koloniudseende : glat, skinnende, i midten let ophøjet Kolonifarve : grålig-hvid Celler i kultur : ofte enkeltceller eller to sammen, sjældent 15 ' større hobe Hæmolyse : på blodplader udstregede kulturer viste stærk hæmolyse Anaerob vækst : stammen vokser også under 20 anaerobe betingelsef Lysozym-sensibilitet : cellerne er op til 2 mg/hil resistente over for lysozym Lysostaphin-sensibilitet : cellerne er allerede ved 20 gg/ml senslbile over for lysostaphin Epidermin-Resistens : påvist op til 1 mg/ml Andre resistenser : i væskekultur viser stam men en udpræget resistens over for Streptomycin (op til 1 mg/ ml) og Spectinanycin (0,5 mg/ ml) Forhøjet NaCl-indhold : stammen vokser endnu godt ved 15 vægt% natriumchlorid. hvorhos kolonierne eller de udstregede kulturer er klæbrige . 36 DK 172818 B17. Stapylococcus epidermidis DSM 3095 # 5 characterized by # having the following characteristics: Gram staining positive Cell size: diameter 0.5-0.8 µm Colony size: approx. Mm mm 10 Colony appearance: smooth, shiny, middle slightly raised Colony color : greyish-white Cells in culture: often single cells or two together, rarely 15 'larger heap Hemolysis: strong cultures depicted on platelets showed strong hemolysis Anaerobic growth: strain also grows under 20 anaerobic conditions Lysozyme sensitivity: cells up to 2 mg / hil lysozyme-resistant Lysostaphin sensitivity: cells are already at 20 µg / ml sensitized to lysostaphin Epidermin-Resistance: detected up to 1 mg / ml Other resistances: in liquid culture, strain shows a pronounced resistance to Streptomycin (up to 1 mg / ml) and Spectinanycin (0.5 mg / ml) Increased NaCl content: the strain still grows well at 15 wt% sodium chloride. where the colonies or the extinct cultures are sticky. 36 DK 172818 B1 7. Molmasse: I området 2160 (uden anioner}7. Molecular mass: In the region of 2160 (without anions} 8. Antibakterielle lægemiddelpræparater, kendetegnet ved, at de har et indhold af Epidermin ifølge krav 1 eller 2 foruden sari vanlige bære- og/eller hjælpestoffer.Antibacterial drug preparations, characterized in that they contain an Epidermin content according to claim 1 or 2 in addition to conventional carriers and / or excipients. 8. Ultraviolet absorptionsspektrum: I vandig opløsning langbølget maksimum ved 267 nm (Fig.3).8. Ultraviolet absorption spectrum: In aqueous solution, long-wave maximum at 267 nm (Fig. 3). 9. Infrarødt absorptionsspektrum: IR-spektrum af en prøve i en kaliumbromidtablet (Fig.4).9. Infrared absorption spectrum: IR spectrum of a sample in a potassium bromide tablet (Fig. 4). 10. Kernemagnetiske resonansspektre: 1H-NMR-spektrum: Fig.5, ^C-NMR-spektrum: Fig.6.10. Nuclear Magnetic Resonance Spectra: 1 H-NMR Spectrum: Fig. 5, C-NMR Spectrum: Fig. 6. 9. Anvendelse af Epidermin ifølge krav 1 eller 2, til bekaanpelse af bakterier. "v9 - «lU .mUse of Epidermin according to claim 1 or 2, for the control of bacteria. "v9 -« lU .m
DK198505099A 1984-11-06 1985-11-05 Antibiotic polypeptide, method for its preparation and its use DK172818B1 (en)

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DE19843440423 DE3440423A1 (en) 1984-11-06 1984-11-06 Antibiotic polypeptide, process for its preparation, strain of Staphylococcus epidermidis producing this polypeptide, preparation forms containing this polypeptide and its use for the control of infectious diseases
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DE19853523478 DE3523478A1 (en) 1985-07-01 1985-07-01 ANTIBIOTIC POLYPEPTIDE, METHOD FOR THE PRODUCTION THEREOF, THIS POLYPEPTIDE GENERATING STEM FROM THE STAPHYLOCOCCUS EPIDERMIDIS, PREPARATION FORMATS CONTAINING THIS POLYPEPTIDE, AND ITS USE FOR TUNING INFECTIVE
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