DE10350131A1 - New fusion protein, useful for treating leukemia and solid tumors, comprises specific antigen-binding, microtubulin-binding and immune response-inducing regions, also related nucleic acid - Google Patents
New fusion protein, useful for treating leukemia and solid tumors, comprises specific antigen-binding, microtubulin-binding and immune response-inducing regions, also related nucleic acid Download PDFInfo
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- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/62—DNA sequences coding for fusion proteins
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- C07K2319/40—Fusion polypeptide containing a tag for immunodetection, or an epitope for immunisation
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Abstract
Die
Erfindung betrifft die Bereiche der Tumorphysiologie und der Biotechnologie.
Die
Aufgabe der Erfindung besteht darin, penetrierende Antikörper, vorzugsweise
lgG so zu modifizieren, dass sie das Zellwachstum hemmen und somit
Tumor und Protozoenzellen schädigen
können.
Die
Aufgabe der Erfindung wird Fusionsproteine enthaltend Antikörper-Binde-
und Mikrotubuli-Binderegionen gelöst.The invention relates to the fields of tumor physiology and biotechnology.
The object of the invention is to modify penetrating antibodies, preferably IgG, in such a way that they inhibit cell growth and thus can damage tumor and protozoan cells.
The object of the invention is achieved by fusion proteins containing antibody binding and microtubule binding regions.
Description
Die Erfindung betrifft die Bereiche der Tumorphysiologie und der Biotechnologie.The The invention relates to the fields of tumor physiology and biotechnology.
In der Tumortherapie stellen Operationen, Bestrahlung und Chemotherapie nach wie vor die entscheidenden Maßnahmen zur Therapie der Erkrankung dar. Bei der chemischen Tumortherapie (Chemotherapie) werden je nach Tumortyp meist Zytostatika unterschiedlicher Wirkungsart verwendet, so etwa Alkylantien, Nitrosoharnstoffverbindungen, Folsäureantagonisten, Pyrimidin- und Purinanaloga wie Fluorouracil, Antibiotika mit Wirkung auf die DNA-abhängige RNA-Polymerase oder Enzyme wie L-Asparaginase. Eine Gruppe von Cytostatika für die Chemotherapie sind die Mitosehemmstoffe wie etwa Taxol und Vinca-Alkaloide.In of tumor therapy provide surgery, radiation and chemo as before, the decisive measures for the treatment of the disease In chemical tumor therapy (chemotherapy) are ever according to tumor type usually cytostatic agents of different modes of action used, so such as alkylating agents, nitrosourea compounds, folic acid antagonists, Pyrimidine and purine analogues such as fluorouracil, antibiotics with effect on the DNA-dependent RNA polymerase or enzymes such as L-asparaginase. A group of cytostatics for chemotherapy are the mitotic inhibitors such as taxol and vinca alkaloids.
Auf Grund ihrer sehr guten Antitumor-Aktivität haben besonders die Mitosehemmstoffe in letzter Zeit verstärkte Beachtung gefunden. Die Mitosehemmer beeinflussen den Aufbau oder Abbau der aus Mikrotubuli bestehenden Teilungsspindel – und greifen somit an der Zellteilung an. Das bekannte Colchicin- oder Vinca-Alkaloide binden an spezifischen Bindestellen des α- oder β-Tubulins – als Baustein der Miktotubuli – und bewirken z.B. eine Hemmung des Aufbaus der Mikrotubuli. Andere Mitiosegifte – beispielsweise das Taxol – bewirkt deren Destabilisierung.On The reason for their very good anti-tumor activity is especially the mitosis inhibitors reinforced recently Attention found. The mitosis inhibitors influence the construction or Degradation of microtubule dividing spindle - and thus attack at the cell division. The known colchicine or vinca alkaloids bind to specific Binding sites of the α- or β-tubulin - as a building block the Miktotubuli - and cause, e.g. an inhibition of the structure of the microtubules. Other Mitiosegifte - for example the taxol - causes their destabilization.
Mitose- oder Spindelgifte sind hochgradig toxisch und sind daher für therapeutisches Zwecke problematisch. Die Toxizität von Colchicin ist sogar so hoch, daß diese Substanz bislang gar nicht therapeutisch verwendet wird. Das aus Eiben (Taxus) isolierte Alkaloid Taxol ist derzeit Gegenstand intensiver Forschung.mitosis or spindle toxins are highly toxic and are therefore therapeutic Purposes problematic. The toxicity of colchicine is even so high that these Substance has not been used therapeutically so far. The end Yew (Taxus) isolated alkaloid Taxol is currently the subject of intensive Research.
Die meisten Mitosehemmer binden an das β-Tubulin der Mikrotubuli. Dazu weisen sie Bindungsstellen auf, deren unterschiedliche hohe Spezifität für eine Klassifizierung der Mitosehemmer herangezogen wird. So werden verschiedene Gruppen wie der Colchizin-Typ, der Taxan-Typ, der Vinca Alkaloid Typ oder der Rhyoxin Typ unterschieden.The Most mitotic inhibitors bind to the microtubule β-tubulin. To they have binding sites whose different high specificity for a classification the mitosis inhibitor is used. So are different groups such as the colchicine type, the taxane type, the vinca alkaloid type or the rhyoxin type distinguished.
Auf Grund der hohen Toxizität der Zytostatika ist eine Therapie mit diesen Substanzen mit vielen Nebenwirkungen verbunden, die für die betroffenen Patienten oft kaum erträglich sind. Daher wird seit vielen Jahren an der Verbesserung der Therapien mit der Zielsetzung der Vermeidung oder Reduzierung der Nebenwirkungen gearbeitet. Ein Ansatz dazu stellt der Versuch dar, die Wirkstoffe gezielt nur zu den zu therapierenden Zellen – d. h. zu den Zielzellen – zu lenken.On Reason of high toxicity The cytostatics is a therapy with these substances with many side effects connected to that for the affected patients are often hardly bearable. Therefore, for many Years of improving therapies with the objective of Avoidance or reduction of side effects worked. An approach this is the attempt to target the active ingredients only to the treating cells - d. H. to the target cells - too to steer.
Eine Möglichkeit zur Verwirklichung dieses Ansatzes basiert im wesentlichen darauf, zelltyp-spezifische Epitope zu identifizieren, einen Epitop-spezifischen monoklonalen Antikörper zu erzeugen und den derart gewonnen Antikörper oder Antigen-bindende Fragmente davon mit einem therapeutisch wirksamen Molekül zu koppeln. Ein derartiger Ansatz ist Gegenstand eines Forschungsprojekts der Universität von Kalifornien mit dem Ziel einer spezifischen Therapie von Brustkrebs (Sherie L. Morrison, Ph.D.: "Antibody Fusion Proteins for the Therapy of Breast Cancer", University of California, Los Angeles, 1997–1999). Hierbei wurden Antikörper gegen die brustkrebsspezifischen Moleküle her2/neu und CEA verwendet und mit immunstimulierenden Molekülen verbunden, welche die Aktivität der T-Zellen stimulieren.A possibility to implement this approach is essentially based on identify cell-type specific epitopes, an epitope-specific monoclonal antibody to produce and the thus obtained antibody or antigen-binding To couple fragments thereof with a therapeutically active molecule. Such an approach is the subject of a research project of the university from California with the aim of a specific therapy of breast cancer (Sherie L. Morrison, Ph.D .: "Antibody Fusion Proteins for the Therapy of Breast Cancer ", University of California, Los Angeles, 1997-1999). This was antibodies used against the breast cancer specific molecules her2 / neu and CEA and associated with immunostimulatory molecules that increase the activity of T cells stimulate.
Obwohl dieser Ansatz mit dem Vorteil einer hohen therapeutischen Selektivität einhergeht, ist er in der Praxis nur unter großen Anstrengungen bei hohem Aufwand und langer Entwicklungsdauer umzusetzen, da zahlreiche Entwicklungsschritte zu seiner Realisierung erforderlich sind. Hierzu müssen zunächst für den jeweiligen Zelltyp spezifische Antigene isoliert werden. Da es sich bei diesen in der Regel um Proteinantigene handelt, werden im folgenden zellspezifische Epitope des Antigens ermittelt, die möglichst geringe Ähnlichkeiten zu Epitopen der Proteine anderer Zelltypen aufweisen. Dies ist erforderlich zur Vermeidung von Kreuzreaktivitäten der therapeutisch eingesetzten Antikörper. Anschließend erfolgt die Herstellung monoklonaler, gegen das jeweilige Antigen gerichteter Antikörper, die im weiteren aufwendigen Selektions- und/oder Mutageneseverfahren wie etwa Phage Display unterzogen werden müssen, um zu einem Antikörper möglichst hoher Spezifität, bzw. möglichst geringer Kreuzreaktivität zu gelangen.Even though this approach is associated with the benefit of high therapeutic selectivity, he is in practice only with great effort at high To implement effort and long development time, since numerous development steps necessary for its realization. For this you must first for each Cell-type specific antigens are isolated. As it is with these usually protein antigens, will be cell-specific in the following Epitopes of the antigen determines the lowest possible similarities to epitopes of the proteins of other cell types. This is required to avoid cross-reactivity of the therapeutically used Antibody. Subsequently the production of monoclonal, against the respective antigen directed antibody, in the further elaborate selection and / or mutagenesis Such as phage display must be subjected to an antibody as possible high specificity, or as possible low cross-reactivity too reach.
Darüber hinaus ergeben sich häufig Schwierigkeiten bei der Herstellung des gebrauchsfertigen Therapeutikums, da ein nicht-humaner Antikörper modifiziert werden muß, um ohne hohes allergenes Potential eingesetzt werden zu können. Dazu können die variablen Regionen, insbesondere jedoch die Complementary determining regions (CDR) in ein humanes Antikörpergerüst eingesetzt, wobei im fertigen Therapeutikum unterschiedlich große antigenspezifische Elemente des therapeutischen Antikörpers, so etwa die antigenbindenden Fragmente (Fab) zum Einsatz kommen. Dabei handelt es sich in aller Regel um antigenspezifische Elemente, die mindestens aus zwei separaten Polypeptidketten bestehen. Die Herstellung dieser komplexen antigenspezifischen Elemente und ihre Verknüpfung mit dem eigentlich therapeutischen Molekül ist in der Praxis oft aufwendig und erfordert komplexe Expressionskonstrukte und entsprechend geeignete Wirtszellen. Nachteile bestehen darin, dass penetrierende Antikörper entweder gar nicht oder mit radiaktiven isotopen oder mit Cholera-Toxinen modifiziert sind.In addition, difficulties often arise in the preparation of the ready-to-use therapeutic agent, since a non-human antibody must be modified in order to be able to be used without high allergenic potential. For this purpose, the variable regions, but in particular the complementarity determining regions (CDR) can be used in a human antibody scaffold, in the finished therapeutic different sized antigen-specific elements of the therapeutic antibody, such as the antigen-binding fragments (Fab) are used. These are usually antigen-specific elements that consist of at least two separate polypeptide chains. The preparation of these complex antigen-specific elements and their linkage with the actually therapeutic molecule is often expensive in practice and requires complex expression constructs and correspondingly suitable host cells. Disadvantages are that penetrating antibodies are either not modified at all or with radioactive isotopes or with cholera toxins.
Die Aufgabe der Erfindung besteht darin, penetrierende Antikörper, vorzugsweise IgG so zu modifizieren, dass sie dass Zellwachstrum hemmen und somit Tumor und Protozoenzellen schädigen können.The The object of the invention is penetrating antibodies, preferably To modify IgG to inhibit cell growth and thus Damage tumor and protozoan cells can.
Die Aufgabe der Erfindung wird Fusionsproteine enthaltend Antikörper-Binde-und Mikrotubuli-Binderegionen gelöst.The The object of the invention is fusion proteins containing antibody binding and Microtubule binding regions dissolved.
Die Wirkung dieser Fusionsprotein-Antikörper-Komplexen besteht darin, Mikrotubuli- bzw. Zytoskelett zu finden bzw. zu fesseln nach dem die Tumorzellen durch hochaffrne Antikörper ihre Zielzellen binden und penetrieren.The The effect of these fusion protein-antibody complexes is to Mikrotubuli- or cytoskeleton to find or bind after the the tumor cells bind their target cells by high-affinity antibodies and penetrate.
Die Antikörper Binderegion ist z.B. Staphylokokken protein A (SPA), extrazelluläre Region des Fc Rezeptors CD 64 etc.The antibody Binding region is e.g. Staphylococcal protein A (SPA), extracellular region Fc receptor CD 64 etc.
Die Mikrotubuli-Binderegion ist z.B. Gephyrin, MID-1, MAP, Tau etc.The Microtubule binding region is e.g. Gephyrin, MID-1, MAP, Tau etc.
Diese Fusionsproteine können außerdem lange und superlange spacer bzw. -linkerregionen wie z.B. polyglyzin oder Polyprolin enthalten, die mit Membranpenetrationsdomäne (MBD) oder Proteintransduktionsdomäne (PTD) fusioniert sind.These Fusion proteins can also long and super long spacer regions such as e.g. polyglycine or Polyproline Containing Membrane Penetration Domain (MBD) or protein transduction domain (PTD) are merged.
Die Fusionsproteine können aus Immunantwort-auslösenden Regionen wie z. B. Fc, B 7.1 oder B 7.2 enthalten, um die Wirkung der Komplexe zu erhöhen.The Fusion proteins can from immune-triggering Regions such. B. Fc, B 7.1 or B 7.2 contain the effect to increase the complexes.
Die Fusionsproteine können Nukfeinsäure- oder Polysaccharid-Bindedomänen enthalten bzw. mit denen fusioniert werden, um durch Vernichtung bzw. erhöhte Konzentration die Wirkung zu verstärken.The Fusion proteins can Nucleic acid or Polysaccharide-binding domains or with which they are merged in order to increased Concentration to enhance the effect.
Die Fusionsproteine können mit GFP oder anderen fluorezenten Proteinen fusioniert werden , um ihre Wirkung optisch zu verfolgen oder ihre Konzentration durch Intensität der Fluoreszenz zu messen.The Fusion proteins can be fused with GFP or other fluorescent proteins to to visually pursue their effects or their concentration intensity to measure the fluorescence.
Außerdem können diese Fusionsproteine Gelenkregionen, wie z.B. Fünf-Glyzinregionen und mindestens eine GST-, Histag oder eine andere Region zur Durchführung der Affinitätsreinigung enthalten.Besides, these can Fusion proteins hinge regions, such as e.g. Five-glycine regions and at least one GST, Histag or another region to perform the affinity purification contain.
Die beschriebene Proteintransduktionsdomäne (PTD) ist eine elf – Aminosäure lange Region, die eine Region des HIV Tat Proteins darstellt.The The protein transduction domain (PTD) described is one eleven amino acid long Region representing a region of the HIV Tat protein.
Dem Forscher Dowdy und seinen Kollegen ist gelungen, 60 Proteine in der Größen Ordnung zwischen 15 kDa und 120 kDa zu fusionieren und nach folgender Denaturierung der Fusion mit Harnstoff ins Zytosol zu transportieren. (Science 285, 1569–1572, 1999 und Nature biotechnology Vol. 17 S. 942, Oct. 1999).the Researcher Dowdy and his colleagues managed to get 60 proteins in the sizes order between 15 kDa and 120 kDa and following denaturation transport the fusion with urea into the cytosol. (Science 285, 1569-1572, 1999 and Nature biotechnology Vol. 17 p. 942, Oct. 1999).
Nach der Internalisierung des Fusionsproteins wirkt die Mikrotubuli-Bindedomäne wie z.B. Gephyrin, Tau, MAP oder MID-1 im Zytosol. Sie bindet Mikrotubuli und fesselt somit das Zytoskelett. Das dynamische Gleichgewicht ( Wilde et al Nature cell biology 2001, March, vol. 3 und Carazo. Salas et al. Nature Cell biology 2001, March, vol. 3.) der Mikrotubuli wird beeinträchtigt und die jeweilige Zelle kann sich nicht mehr teilen. Sobald sie sich nicht mehr teilt, stirbt sie.To the internalization of the fusion protein, the microtubule-binding domain acts as e.g. Gephyrin, Tau, MAP or MID-1 in the cytosol. It binds microtubules and thus captures the cytoskeleton. The dynamic balance (Wilde et al., Nature Cell Biology 2001, March, vol. 3 and Carazo. Salas et al. Nature Cell biology 2001, March, vol. 3.) of the microtubules impaired and the cell can not divide anymore. As soon as you she does not share anymore, she dies.
Dadurch wird das Wachstum des Tumors, z.B. eines soliden Tumors gehemmt.Thereby the growth of the tumor, e.g. a solid tumor inhibited.
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Das Fusionsprotein enthält SPA, MBD und eine DNA-Bindedomäne, die DNA bindet.The Contains fusion protein SPA, MBD and a DNA binding domain, the DNA binds.
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Das Fusionsprotein enthält SPA, MBD und HLA-B7.1-Region die eine zusätzlich T-Zell-aktivierung induziert.The Contains fusion protein SPA, MBD and HLA-B7.1 region which induces additional T-cell activation.
Beispiel 1example 1
Klonierung und Expression des Fusionskonstruktes SPA-5G-Gephyrin C DNA für Gephyrin wird durch PCR kloniert, bzw. die Homo sapiens Gephyrin (GPH) m RNA wird durch RT-PCR kloniert. Die Daten der GPH m RNA-Sequenz sind bei im Internet, beim National Center for Biotechnology information, NIH, Bethesda MD 208 94, USA erhältlich, sowie auf der Internet Seite von NCBI (httpa:// www.ncbi.nlm.nih.gov:80/entez/... eotide...) zu finden.Cloning and expression of the fusion construct SPA-5G-Gephyrin C DNA for gephyrin is cloned by PCR, or the Homo sapiens gephyrin (GPH) m RNA is cloned by RT-PCR. Data from the GPH mRNA sequence are available on the Internet at the National Center for Biotechnology information, NIH, Bethesda MD 208 94, USA, as well as on the internet page of NCBI (https: // www.ncbi.nlm.nih.gov:80/entez/ ... eotide ...).
C DNA fĂĽr SPA ligiert mit dem Primer enthaltend die Information fĂĽr die FĂĽnf-Ghyzin -Spacer wird ebenfalls mit PCR kloniert.C DNA for SPA ligated with the primer containing the information for the five-gyzine spacers also becomes cloned with PCR.
Das Fusionsprotein wird aus PCR-Produkten zusammengesetzt. Die PCR-Primern sind so konstruiert, dass sie Restriktionsstellen auf 5' und 3' Enden enthalten, um spätere Ligationsschritte durchzuführen. Die 5' und 3' Enden des Gephyrin-PCR-Produkts enthalten Bam HI und Hind III Restriktionsstellen. Die 5' und 3' Enden des SPA-PCR-Produkts enthalten Xmnl und Bg III Restriktionsstellen.The Fusion protein is composed of PCR products. The PCR primers are designed to contain restriction sites on 5 'and 3' ends, for later Perform ligation steps. The 5 'and 3' ends of the gephyrin PCR product contain Bam HI and Hind III restriction sites. The 5 'and 3' ends of the SPA-PCR product contain Xmnl and Bg III restriction sites.
Nach der Amplifikation und Reinigung werden die PCR Produkten in PCR II Vektoren ligiert. Positive Klone werden durch Screening Plasmide richtiger Masse identifiziert. Die Klone werden durch DNA-Sequenzierung bzw. durch Standardmethoden überprüft bzw. bestätigt.To For amplification and purification, the PCR products are PCR II vectors ligated. Positive clones are screened by plasmids right mass identified. The clones are made by DNA sequencing or checked by standard methods or approved.
Das Gephyrin-PCR-Produkt wird aus der PCR II durch restriktive Spaltung durch Bam HI und Hind III herausgeschritten, und SPA-PCR-Produkt wird aus dem PCR II durch Xmn I und Bg III herausgeschnitten.The Gephyrin PCR product is released from PCR II by restrictive cleavage out through Bam HI and Hind III, and becomes SPA PCR product cut out of the PCR II by Xmn I and Bg III.
Ligation der gephyrin und SPA-Gegmente in den pMal-c2 Expressionsvektor erfolgt unter Standard-Bedingungen. Der pMal-c2 Vektor wird mit Bam H I und Hind 3 behandelt. Der Gephyrin-Segment wird durch diese Behandlung in den pMal-c2 hinein ligiert.ligation the gephyrin and SPA segments into the pMal-c2 expression vector under standard conditions. The pMal-c2 vector is labeled Bam H I and Hind 3 treated. The gephyrin segment is going through this treatment into the pMal-c2 ligated.
PMal-c2-Gephyrin wird mit X mnl und Bam HI und geschnitten, um SPA Segment hinein zu ligieren.PMAL-c2 gephyrin is cut with X mnl and Bam HI and cut in to SPA segment to ligate.
Ligationspuffer wird aus 66 mM Tris PH 7,6, 5 mM Mg cl2, 5 mM DTT und 1 mM ATP, sowie aus der T4 DNA Ligase ( insgesamt 20 Mikroliter) zusammengesetzt. Die Ligation wird bei 14°C durchgeführt.Ligation buffer is prepared from 66 mM Tris PH 7.6, 5 mM MgCl2, 5 mM DTT and 1 mM ATP, and T4 DNA ligase (20 microliters total). The ligation is at 14 ° C carried out.
Das Ligationsprodukt wird in E Coli transformiert, eaprimiert und abschliessentd gereinigt.The Ligation product is transformed into E coli, expressed and completed cleaned.
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| US10/577,613 US20070106066A1 (en) | 2003-10-28 | 2004-10-28 | Cherkasky fusion proteins containing antibody-, antigen- and microtubule-binding regions and immune response-triggering regions |
| PCT/IB2004/003536 WO2005040382A2 (en) | 2003-10-28 | 2004-10-28 | Cherkasky fusion proteins containing antibody-, antigen- and microtubule-binding regions and immune response-triggering regions |
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| DE102005028619A1 (en) | 2005-06-20 | 2008-08-14 | Alexander Cherkasky | New Cherkasky fusion protein comprises antibody binding protein, non-antibody binding domain and/or any domain useful as materials, medicines, coloring- and labelling materials, adhesives and diagnostic systems |
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| Publication number | Priority date | Publication date | Assignee | Title |
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| DE10162870A1 (en) * | 2001-12-20 | 2003-07-10 | Alexander Cherkasky | New fusion protein, useful for treatment of B cell tumors, comprises B cell-specific ligand attached to a cytotoxic or immunostimulating component |
| DE10161738A1 (en) * | 2001-12-15 | 2003-07-17 | Alexander Cherkasky | New fusion protein, useful for selective treatment of T cell tumors, comprises T cell ligand linked to cytostatic or immunostimulating component |
| DE10161899A1 (en) * | 2001-12-17 | 2003-07-24 | Alexander Cherkasky | New fusion protein, useful for treating Hodgkin's disease, comprises a ligand specific for an antigen-presenting cell and a cell-damaging domain |
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| DE10161738A1 (en) * | 2001-12-15 | 2003-07-17 | Alexander Cherkasky | New fusion protein, useful for selective treatment of T cell tumors, comprises T cell ligand linked to cytostatic or immunostimulating component |
| DE10161899A1 (en) * | 2001-12-17 | 2003-07-24 | Alexander Cherkasky | New fusion protein, useful for treating Hodgkin's disease, comprises a ligand specific for an antigen-presenting cell and a cell-damaging domain |
| DE10162870A1 (en) * | 2001-12-20 | 2003-07-10 | Alexander Cherkasky | New fusion protein, useful for treatment of B cell tumors, comprises B cell-specific ligand attached to a cytotoxic or immunostimulating component |
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| Publication number | Priority date | Publication date | Assignee | Title |
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| DE102005028619A1 (en) | 2005-06-20 | 2008-08-14 | Alexander Cherkasky | New Cherkasky fusion protein comprises antibody binding protein, non-antibody binding domain and/or any domain useful as materials, medicines, coloring- and labelling materials, adhesives and diagnostic systems |
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