CN1982464B - Rice blast gene related with virulence and its use - Google Patents
Rice blast gene related with virulence and its use Download PDFInfo
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- CN1982464B CN1982464B CN200510126496A CN200510126496A CN1982464B CN 1982464 B CN1982464 B CN 1982464B CN 200510126496 A CN200510126496 A CN 200510126496A CN 200510126496 A CN200510126496 A CN 200510126496A CN 1982464 B CN1982464 B CN 1982464B
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Abstract
本发明涉及一种与酵母、人类等生物尿卟啉原脱羧酶URO-D基因同源性较高的稻瘟菌基因,命名为MgURO-D,该基因编码367个氨基酸,含4个内含子,5个外显子。本发明还涉及含有该基因的表达载体和宿主以及该基因在植物病害(特别是稻瘟病)防治中的应用以及作为用于植物病害防治的药物的靶标的应用。The present invention relates to a gene of Magnaporthe oryzae with high homology with URO-D gene of yeast, human and other biological uroporphyrinogen decarboxylase, named as MgURO-D, the gene encodes 367 amino acids, including 4 Son, 5 exons. The present invention also relates to the expression vector and host containing the gene, the application of the gene in the control of plant diseases (especially rice blast) and the application as a drug target for plant disease control.
Description
技术领域technical field
本发明涉及植物病害防治领域,更具体地,本发明涉及一种与稻瘟菌(Magnaporthe grisea)致病力相关的与酵母、人类等生物尿卟啉原脱羧酶基因同源性较高的基因,即MgURO-D基因。本发明还涉及该基因在植物病害防治中的应用以及作为用于植物病害防治的药物的靶标的应用。The present invention relates to the field of plant disease prevention and control, more specifically, the present invention relates to a gene related to the pathogenicity of rice blast fungus (Magnaporthe grisea) with higher homology with yeast, human and other biological uroporphyrinogen decarboxylase genes , the MgURO-D gene. The present invention also relates to the application of the gene in plant disease control and as the target of medicine for plant disease control.
背景技术Background technique
由稻瘟菌(Magnaporthe grisea)引发的稻瘟病,是栽培水稻最严重的病害,每年所造成的水稻产量损失达到10%到30%。除了水稻,这种丝状真菌还可以侵染许多禾本科的其它种类,例如小麦、穇子等作物(Ekwamu,1991;Igarashi et al.,1986)。它是通过一种特化的侵染结构一附着胞,侵入到植物细胞中去的。附着胞是一种圆顶状、细胞壁黑色素化的细胞,由萌发的分生孢子受疏水表面诱导发育而成(Dean,1997),它可以通过快速的甘油积累而产生巨大的膨压(de Jong,1997),并凭借该膨压所产生的机械压力侵入水稻叶片表皮。侵染菌丝在寄主叶片细胞内生长迅速,几天内便可以观察到梭形病斑出现。如果稻瘟病发生在秧苗期,会严重影响生长及产量,更有甚者,会导致秧苗死亡。Rice blast, caused by Magnaporthe grisea, is the most serious disease of cultivated rice, causing a loss of 10% to 30% of rice yield every year. In addition to rice, this filamentous fungus can also infect many other species of Poaceae, such as wheat, scorpion and other crops (Ekwamu, 1991; Igarashi et al., 1986). It invades into plant cells through a specialized infection structure, the appressorium. The appressorium is a dome-shaped, melaninized cell wall that develops from germinating conidia induced by a hydrophobic surface (Dean, 1997), which can generate enormous turgor through rapid glycerol accumulation (de Jong , 1997), and invaded the epidermis of rice leaves by virtue of the mechanical pressure generated by the turgor pressure. Infection hyphae grow rapidly in the host leaf cells, and fusiform lesions can be observed within a few days. If rice blast occurs in the seedling stage, it will seriously affect the growth and yield, and what's more, it will cause the death of the seedlings.
稻瘟菌为丝状真菌,常见形态为单倍体,有性世代属子囊菌亚门,因为适用于各种经典及现代分子遗传学操作,所以可以作为一种模式物种来研究真菌与寄主植物的相互作用。稻瘟菌菌株70-15的基因组草图及相关分析,最近刚刚报道。全基因组估计约有40.3Mb,测序工作已达到7倍以上的覆盖率,38.8Mb的序列已经获得(Dean et al.,2005)。基因组序列可以从因特网上免费获得,这为该领域的研究者提供了揭示这一具有破坏性的丝状病原真菌致病机理并制定相应对策的巨大契机。Magnaporthe oryzae is a filamentous fungus, the common form is haploid, and the sexual generation belongs to Ascomycota subphylum. Because it is suitable for various classical and modern molecular genetics operations, it can be used as a model species to study fungi and host plants. Interaction. The draft genome and related analysis of Magnaporthe oryzae strain 70-15 has just been reported recently. The whole genome is estimated to be about 40.3Mb, and the sequencing work has reached a coverage rate of more than 7 times, and a sequence of 38.8Mb has been obtained (Dean et al., 2005). Genome sequences are freely available on the Internet, providing researchers in the field with a great opportunity to unravel the pathogenesis of this destructive filamentous fungal pathogen and develop countermeasures.
与传统的转化方法相比,根癌农杆菌介导的转化(Agrobacteriumtumefaciens-mediated transformation,ATMT)具有诸多优点。该方法操作简便;无论是经过随机插入还是依靠同源重组,转化效率均高;分生孢子、菌丝都可以用作转化的初始材料,从而避开了繁琐的原生质体制备过程;用ATMT方法获得的转化子中,T-DNA单拷贝插入几率高,这为进一步研究所观察到的转化子表型与T-DNA标定基因的相关性提供了便利;T-DNA在染色体上的插入近乎是随机的;不能被T-DNA标定的突变所占比例低;所获得的转化子表型与T-DNA共分离比率高。基于上述优点,无论是通过定点靶向的替换突变方式,还是通过随机的插入突变方式对真菌进行系统突变研究,ATMT方法都是一个非常有价值的转化工具(Caroline et al.,2005)。因此,我们采用了这一方法。Compared with traditional transformation methods, Agrobacterium tumefaciens-mediated transformation (ATMT) has many advantages. The method is easy to operate; whether it is through random insertion or by homologous recombination, the transformation efficiency is high; both conidia and hyphae can be used as the initial material for transformation, thus avoiding the tedious protoplast preparation process; In the obtained transformants, the probability of T-DNA single-copy insertion is high, which provides convenience for further research on the correlation between the observed transformant phenotype and the T-DNA marker gene; the insertion of T-DNA on the chromosome is almost Random; the proportion of mutations that cannot be marked by T-DNA is low; the obtained transformant phenotype has a high ratio of co-segregation with T-DNA. Based on the above advantages, the ATMT method is a very valuable transformation tool for systematic mutation research on fungi, whether through site-specific targeted substitution mutation or random insertion mutation (Caroline et al., 2005). Therefore, we adopted this approach.
URO-D(EC 4.1.1.37)是亚铁血红素(heme)合成途径中催化第五步反应的酶。亚铁血红素能参与诸多细胞功能,在依赖于氧的生命活动中,亚铁血红素是一种发挥重要作用的物质;许多与氧结合、氧化伤害防御以及电子传递等功能相关的蛋白,都以亚铁血红素作为辅基(prosthetic group);亚铁血红素还可以通过特定转录调控因子的活性来调控基因的表达(Laura,2004)。因此,亚铁血红素在生物体中是一种很重要的物质。URO-D (EC 4.1.1.37) is an enzyme that catalyzes the fifth step in the heme synthesis pathway. Heme can participate in many cell functions, and heme is a substance that plays an important role in oxygen-dependent life activities; many proteins related to oxygen binding, oxidative damage defense and electron transfer, etc. Heme is used as a prosthetic group; heme can also regulate gene expression through the activity of specific transcriptional regulators (Laura, 2004). Therefore, heme is a very important substance in living organisms.
在进化过程中,亚铁血红素的合成途径是非常保守的(Wyckoff et al.1996).亚铁血红素的合成,从甘氨酸和琥珀酰辅酶A起始,共包括八步酶促反应(见附图1),URO-D以二聚体(dimer)的形式催化第五步反应,将尿卟啉原III(uroporphyrinogen III)转化为卟啉原III(coproporphyrinogenIII)(见附图2)。该反应发生在细胞质中,无需辅因子参与,URO-D催化从底物的乙酸侧链上依次脱去四个羧基,同时形成以下中间产物:七羧基卟啉原(hepta-carboxyporphyrinogen),六羧基卟啉原(hexa-carboxyporphyrinogen),以及五羧基卟啉原(penta-carboxyporphyrinogen)(Rytka et al.,1984)。在人体中,由于遗传或其它原因而导致的URO-D酶活性下降,会发生一种最为常见的卟啉症(porphyries):迟发性皮肤卟啉症(porphyria cutanea tarda,PCT)(Nordmann and Puy,2002)。URO-D酶活性显著下降会导致人体水溶性卟啉的大量积累,在有光的条件下会被激活生成活性氧,进而损害皮肤。小鼠中该酶活性下降也会导致类似的症状,该基因的纯合突变在早期小鼠胚胎中是致死的(Johm D.Phillips et al,2001)。用于研究人类PCT疾病的模型(model)已经分别在斑马鱼和小鼠上建立起来(Han Wang,1998;Johm,Phillips et al,2001)。In the course of evolution, the synthetic pathway of heme is very conserved (Wyckoff et al.1996). The synthesis of heme, starting from glycine and succinyl-CoA, involves a total of eight enzymatic reactions (see Accompanying drawing 1), URO-D catalyzes the fifth step reaction in the form of a dimer, and converts uroporphyrinogen III (uroporphyrinogen III) into porphyrinogen III (coproporphyrinogen III) (see accompanying drawing 2). The reaction occurs in the cytoplasm without the participation of cofactors. URO-D catalyzes the sequential removal of four carboxyl groups from the acetic acid side chain of the substrate, while forming the following intermediate products: hepta-carboxyporphyrinogen, hexa-carboxyl Hexa-carboxyporphyrinogen, and penta-carboxyporphyrinogen (Rytka et al., 1984). In humans, one of the most common porphyrias (porphyries): porphyria cutanea tarda (PCT) (Nordmann and Puy, 2002). A significant decrease in URO-D enzyme activity will lead to a large accumulation of water-soluble porphyrin in the human body, which will be activated to generate reactive oxygen species under light conditions, thereby damaging the skin. Decreased activity of this enzyme in mice results in similar symptoms, and homozygous mutations of this gene are lethal in early mouse embryos (Johm D. Phillips et al, 2001). Models for studying human PCT disease have been established in zebrafish and mice (Han Wang, 1998; Johm, Phillips et al, 2001).
人类URO-D的晶体结构已经在分辨率为1.60的基础上得以确定(见附图3)。该蛋白分子量为40.8kDa,仅一个功能域(domain),由一个(β/α)8-barrel结构组成,该结构带有一个由折叠桶股(the barrel strands)羧基末端的环(loop)组成的深的活性位点裂缝(active site cleft)。许多保守残基成簇集中在这一裂缝:侧链上固定不变的Arg37,Arg41,His339等残基,可能与底物结合有关;而Asp86,Tyr164,Ser219等残基,除可能与底物结合有关外,还可能参与催化反应。在溶液中,URO-D以二聚体形式存在,且趋向于形成晶体。二聚体将各单体的活性位点裂缝组装并列在一起,这表明两个催化中心的相互作用在发挥酶的催化功能时是起重要作用的(Frank et al,1998)。The crystal structure of human URO-D has been obtained at a resolution of 1.60 determined on the basis of (see Figure 3). The protein has a molecular weight of 40.8kDa, has only one functional domain (domain), and consists of a (β/α) 8 -barrel structure with a loop (loop) composed of the carboxy-terminal of the barrel strands (the barrel strands) deep active site cleft. Many conserved residues are clustered in this cleft: Arg37, Arg41, His339 and other residues on the side chain may be related to substrate binding; while Asp86, Tyr164, Ser219 and other residues may be related to substrate binding In addition to binding, it may also participate in catalytic reactions. In solution, URO-D exists as a dimer and tends to form crystals. The dimer assembles and juxtaposes the active site clefts of each monomer, which indicates that the interaction of the two catalytic centers plays an important role in the catalytic function of the enzyme (Frank et al, 1998).
在酿酒酵母(Saccharomyces cerevisiae)中,URO-D由基因HEM12编码而成,该基因通过分别互补(complementation)等位的hem12和hem6突变体菌株而独立克隆得到(Garey et al.1992;Diflumieri et al.1993)。酿酒酵母基因HEM12的两个单倍体突变体菌株:hem6-1B(点突变)和BY4742Δhem12-1A(缺失突变),在不含血红素(hemin)的培养基上不能生长,菌落形成红色荧光,而且为甲硫氨酸营养缺陷型(methionineauxotrophy)。KlHEM12,则为编码另一酵母,克鲁维酵母(Kluyveromyceslactis)中URO-D的基因,也已被克隆。该基因可以互补酿酒酵母的两个突变体:hem6-1B和BY4742Δhem12-1A,使其表型得以恢复。二级结构预测表明,该蛋白符合人类URO-D所报道的(β/α)8-barrel结构(Frank G.et al,1998);基因KlHEM12被突变的克鲁维酵母单倍体菌株,在不添加血红素(hemin)的培养基上生长缓慢,由于积累卟啉,菌落形成红色荧光。研究表明,该基因的转录并不受亚铁血红素或者葡萄糖所抑制,而被不可发酵碳源所轻微诱导(Laura N.et al,2004)。In Saccharomyces cerevisiae, URO-D is encoded by the gene HEM12, which was independently cloned by complementing allelic hem12 and hem6 mutant strains, respectively (Garey et al.1992; Diflumieri et al. .1993). Two haploid mutant strains of Saccharomyces cerevisiae gene HEM12: hem6-1B (point mutation) and BY4742Δhem12-1A (deletion mutation), cannot grow on the medium without heme (hemin), and the colonies form red fluorescence, And for methionine auxotrophy (methionineauxotrophy). KlHEM12, the gene encoding URO-D in another yeast, Kluyveromyceslactis, has also been cloned. This gene can complement two mutants of Saccharomyces cerevisiae: hem6-1B and BY4742Δhem12-1A, and restore their phenotype. The secondary structure prediction shows that the protein conforms to the (β/α) 8-barrel structure reported by human URO-D (Frank G. et al, 1998); Kluyveromyces haploid strain with gene KlHEM12 mutated, in Growth is slow on the medium without adding hemin (hemin), and the colonies form red fluorescence due to the accumulation of porphyrin. Studies have shown that the transcription of this gene is not inhibited by heme or glucose, but slightly induced by non-fermentable carbon sources (Laura N. et al, 2004).
在玉米中,URO-D基因的杂合突变体Les22,表现一种类病变坏死表型(lesion mimic),在叶片上出现微小的、灰白或褐色的、点状的坏死斑,光照会促进坏死的形成。编码URO-D的基因突变导致URO-D活性下降,使其反应的前体尿卟啉原III积累,光照使其能量或电子传给分子氧,成为活性氧,由此造成叶片细胞的损害(Hu et al.,1998)。In maize, the heterozygous mutant Les22 of the URO-D gene exhibits a lesion-like phenotype (lesion mimic), with tiny, grayish-white or brown, dot-like necrosis spots appearing on the leaves, and light can promote necrosis. form. The mutation of the gene encoding URO-D leads to the decrease of URO-D activity, the accumulation of its precursor uroporphyrinogen III, and the energy or electrons are transferred to molecular oxygen by light, which becomes active oxygen, thus causing damage to leaf cells ( Hu et al., 1998).
发明内容Contents of the invention
本发明从已建立的稻瘟菌T-DNA插入群体中,选取一株致病力显著下降的突变体-M230进行研究,序列分析表明,T-DNA插在编码尿卟啉原脱羧酶(uroporphyrinogen decarboxylases,URO-D)基因起始密码子的上游180bp处;该基因含有1104bp的开放阅读框,编码367个氨基酸,命名为MgURO-D,含4个内含子,5个外显子,跟酵母、人类等生物的URO-D基因比对,存在较高的同源性;构建了一个用于互补的真菌表达载体pCMgURO-D,该表达载体可以使M230恢复致病力,这表明,MgURO-D出人意料地与稻瘟菌的致病力密切相关。The present invention selects a mutant-M230 with significantly reduced pathogenicity from the established population of M. decarboxylases, URO-D) upstream of the start codon 180bp; the gene contains an open reading frame of 1104bp, encoding 367 amino acids, named MgURO-D, containing 4 introns, 5 exons, followed by The URO-D gene comparison of yeast, human and other organisms shows high homology; a fungal expression vector pCMgURO-D for complementation was constructed, which can restore the pathogenicity of M230, which shows that MgURO -D was unexpectedly strongly associated with the virulence of Magnaporthe grisea.
因此,本发明的一个目的是提供一种来自稻瘟菌(Magnaporthe grisea)的与酵母、人类等生物尿卟啉原脱羧酶基因同源性较高的基因,即MgURO-D基因,其核苷酸序列如SEQ ID No.1所示。Therefore, an object of the present invention is to provide a kind of gene that is from blast fungus (Magnaporthe grisea) and yeast, human beings etc. biological uroporphyrinogen decarboxylase gene homology is higher, namely MgURO-D gene, its nucleoside The acid sequence is shown in SEQ ID No.1.
本发明还涉及由SEQ ID No.1所编码的氨基酸序列,如SEQ ID No.2所示。The present invention also relates to the amino acid sequence encoded by SEQ ID No.1, as shown in SEQ ID No.2.
本发明还涉及含有上述基因的表达载体。在一个优选实施方案中,含有MgURO-D基因的所述表达载体为pCMgURO-D。根据布达佩斯条约,含有该表达载体pCMgURO-D的大肠杆菌已经于2005年11月29日保藏于中国北京中关村中国微生物菌种保藏管理委员会普通微生物保藏中心(CGMCC),保藏号为CGMCC No.1548。The present invention also relates to expression vectors containing the above-mentioned genes. In a preferred embodiment, the expression vector containing the MgURO-D gene is pCMgURO-D. According to the Budapest Treaty, the Escherichia coli containing the expression vector pCMgURO-D has been deposited on November 29, 2005 in the General Microorganism Collection Center (CGMCC) of China Microbiological Culture Collection Management Committee (CGMCC) in Zhongguancun, Beijing, China, and the preservation number is CGMCC No.1548.
本发明还涉及含有上述表达载体的微生物宿主。所述宿主可以是大肠杆菌或农杆菌。The present invention also relates to microbial hosts containing the above expression vectors. The host can be Escherichia coli or Agrobacterium.
本发明另一个目的是提供上述基因在植物病害防治中的应用。所述植物病害特别是由稻瘟菌导致的稻瘟病。Another object of the present invention is to provide the application of the above gene in the control of plant diseases. The plant disease is especially rice blast caused by Magnaporthe oryzae.
本发明还有一个目的是提供所述的基因作为用于植物病害防治的药物的靶标的应用。所述植物病害特别是由稻瘟菌导致的稻瘟病。Another object of the present invention is to provide the use of said gene as a drug target for plant disease control. The plant disease is especially rice blast caused by Magnaporthe oryzae.
本发明还提供一种治疗由稻瘟菌导致的植物稻瘟病的方法,包含阻断或抑制稻瘟菌中MgURO-D基因的表达(例如利用该基因的反义RNA以及siRNA等)。The present invention also provides a method for treating plant rice blast caused by Magnaporthe oryzae, comprising blocking or inhibiting the expression of MgURO-D gene in Magnaporthe oryzae (for example, using antisense RNA and siRNA of the gene, etc.).
在本发明的另一方面,提供阻断或抑制上述基因的表达的药剂(如该基因的反义RNA以及siRNA等)在制备药物中的应用,所述药物用于控制由稻瘟菌导致的植物稻瘟病。In another aspect of the present invention, there is provided a medicament for blocking or inhibiting the expression of the above-mentioned gene (such as the antisense RNA and siRNA of the gene, etc.) in the preparation of medicines, and the medicine is used to control the disease caused by Magnaporthe oryzae. Plant blast.
本研究表明,URO-D对稻瘟菌的致病性是至关重要的,MgURO-D基因由于T-DNA插入启动子区而导致表达受到抑制时,突变体菌株的致病力显著下降,病斑在水稻叶片上很难扩展,而将含该基因的表达载体pCMgURO-D转入后,致病力则得以恢复,可见,该突变体菌株在侵入水稻叶片后,因不能有效抵御寄主防御反应而致使侵染菌丝的生长受到抑制。This study shows that URO-D is crucial to the pathogenicity of Magnaporthe grisea. When the expression of MgURO-D gene is inhibited due to the insertion of T-DNA into the promoter region, the pathogenicity of the mutant strains is significantly reduced. Lesions are difficult to expand on rice leaves, but after the expression vector pCMgURO-D containing this gene is transferred, the pathogenicity can be restored. It can be seen that after the mutant strain invades rice leaves, it cannot effectively resist the host defense. Inhibition of the growth of infected hyphae.
附图说明Description of drawings
图1所示为酵母中亚铁血红素的合成途径(http://db.yeastgenome.org/cgi-bin);Figure 1 shows the synthetic pathway of heme in yeast (http://db.yeastgenome.org/cgi-bin);
图2所示为URO-D催化的脱羧反应(John D.et al,2001);Figure 2 shows the decarboxylation reaction catalyzed by URO-D (John D. et al, 2001);
图3所示为人类URO-D二聚体的立体结构(Frank G.et al,1998);Figure 3 shows the three-dimensional structure of human URO-D dimer (Frank G. et al, 1998);
图4所示为M230突变体菌株T-DNA的插入拷贝数检测(Southern印迹分析,所选用限制性内切酶分别为:A.EcoR I;B.Pst I);Figure 4 shows the insertion copy number detection of M230 mutant strain T-DNA (Southern blot analysis, the selected restriction endonucleases are respectively: A.EcoR I; B.Pst I);
图5所示为T-DNA在突变体菌株M230中的插入部位;Figure 5 shows the insertion site of T-DNA in mutant strain M230;
图6所示为MgURO-D基因结构(深黑色为外显子,而灰色为内含子);Figure 6 shows the MgURO-D gene structure (the dark black is the exon, and the gray is the intron);
图7所示为不同生物URO-D蛋白氨基酸序列比对(三角符号表示与结合底物或者发挥催化功能密切相关的残基,实心三角表示数据源于人体,而空心三角则表示数据来源于酵母);Figure 7 shows the amino acid sequence alignment of different biological URO-D proteins (triangular symbols indicate residues closely related to binding substrates or performing catalytic functions, solid triangles Indicates that the data comes from the human body, while the hollow triangle means that the data comes from yeast);
图8所示为URO-D蛋白系统进化树;Figure 8 shows the URO-D protein phylogenetic tree;
图9所示为用于构建表达载体pCMgURO-D的序列;Figure 9 shows the sequence used to construct the expression vector pCMgURO-D;
图10所示为pCMgURO-D真菌表达载体图谱;Figure 10 shows the pCMgURO-D fungal expression vector map;
图11所示为不同菌株致病力比较(接种水稻品种日本晴的稻瘟菌菌株从左至右依次为:水,M230,转入表达载体pMgURO-D的M230菌株,Y34)。Figure 11 shows the comparison of the pathogenicity of different strains (the rice blast fungus strains inoculated with the rice variety Nipponbare are, from left to right: water, M230, and the M230 strain transformed into the expression vector pMgURO-D, Y34).
图12所示为突变体菌株M230中T-DNA插入部位的侧翼序列(注:斜体部分为T-DNA右边界序列,下划线部分则为突变体菌株M230基因组序列)。Figure 12 shows the flanking sequence of the T-DNA insertion site in the mutant strain M230 (note: the italic part is the right border sequence of the T-DNA, and the underlined part is the genomic sequence of the mutant strain M230).
图13所示为突变体菌株M230与Y34在V8液体培养基中的生长状况比较。Figure 13 shows the comparison of the growth status of mutant strains M230 and Y34 in V8 liquid medium.
具体实施方式Detailed ways
下文将参考实施例详细描述本发明,所述实施例仅是意图举例说明本发明,而不是意图限制本发明的范围。本发明的范围由后附的权利要求具体限定。Hereinafter, the present invention will be described in detail with reference to Examples, which are only intended to illustrate the present invention and are not intended to limit the scope of the present invention. The scope of the invention is specifically defined by the appended claims.
实施例Example
1.MgURO-D基因T-DNA插入突变体的获得:1. Obtaining of T-DNA insertion mutants of MgURO-D gene:
该突变体是通过根癌农杆菌介导的转化法(ATMT)(Caroline et al.,2005)获得的。This mutant was obtained by the Agrobacterium tumefaciens-mediated transformation method (ATMT) (Caroline et al., 2005).
1.1农杆菌的培养1.1 Cultivation of Agrobacterium
挑取含有质粒pBHt2(Mullins,2001)的根癌农杆菌菌株Agl-1(Mullins,2001)单菌落,基本培养基(MM;Hooykaas et al.,1979),50ug/ml卡那霉素,10ug/ml利福平,250rpm,28℃振荡培养48h;4000rpm,离心5分钟,弃上清,诱导培养基(IM;Bundock et al.,1995)重悬,4000rpm离心5分钟,弃上清;IM(含300uM乙酰丁香酮)培养基重悬,28℃,250rpm振荡摇菌6h。Pick a single colony of Agrobacterium tumefaciens strain Agl-1 (Mullins, 2001) containing the plasmid pBHt2 (Mullins, 2001), minimal medium (MM; Hooykaas et al., 1979), 50ug/ml kanamycin, 10ug /ml rifampicin, 250rpm, shake culture at 28°C for 48h; centrifuge at 4000rpm for 5 minutes, discard the supernatant, resuspend in induction medium (IM; Bundock et al., 1995), centrifuge at 4000rpm for 5 minutes, discard the supernatant; IM (containing 300 uM acetosyringone) medium resuspended, 28 ° C, 250 rpm shaking shake bacteria 6h.
1.2稻瘟菌孢子的获得1.2 Acquisition of Magnaporthe grisea spores
本研究选用自中国云南田间分离的致病菌株-Y34(中国农业大学提供)作为研究对象;将菌丝接种到含50ug/ml四环素,100ug/ml链霉素的燕麦培养基(OMA;燕麦50g/L)上;28℃暗培养5~7天,待菌落基本长满培养皿时,用三角刮棒将表面菌丝刮去,连续光照再培养3天,便可见灰色的孢子层出现;用IM液体培养基刮取,Miracloth(CALBIOCHEMR,USA)过滤收集孢子,显微镜观察,利用血球计数器调节孢子浓度为1×106/ml。In this study, the pathogenic strain-Y34 (provided by China Agricultural University) isolated from the field of Yunnan, China was selected as the research object; the mycelium was inoculated into oat medium (OMA; oat 50g) containing 50ug/ml tetracycline and 100ug/ml streptomycin /L) on; 28 ° C dark culture for 5 to 7 days, when the bacterial colony is basically covered with the petri dish, use a triangular scraper to scrape off the surface hyphae, and continue to cultivate for 3 days under continuous light, and the gray spore layer can be seen; The IM liquid medium was scraped, and the spores were collected by Miracloth (CALBIOCHEM R , USA) filtration, observed under a microscope, and the spore concentration was adjusted to 1×10 6 /ml by a hemocytometer.
1.3农杆菌与稻瘟菌孢子共培养及转化子筛选1.3 Co-cultivation of Agrobacterium and Magnaporthe oryzae spores and screening of transformants
将在IM液体培养基中预先诱导6小时的农杆菌菌液和稻瘟菌孢子液等体积混合,加入AS,使终浓度达到500uM,混匀,然后按250~350ul/皿,均匀涂抹在铺有微孔滤膜的IM培养基上,28℃黑暗培养48h;共培养完毕后,用无菌水刮取虑膜表面收集转化孢子,每皿约加水2~3ml,分别均匀涂到3~6个燕麦培养基(含200ug/ml潮霉素,50ug/ml四环素,100ug/ml链霉素)上,潮霉素用于筛选转化子,其它抗生素用于抑止农杆菌。3~5天后挑取扩展的菌落到含有同样抗生素的燕麦培养基上。Mix equal volumes of Agrobacterium bacterium liquid and Magnaporthe grisea spore liquid induced in IM liquid medium for 6 hours in advance, add AS to make the final concentration reach 500uM, mix well, and then apply 250-350ul/dish evenly on the floor On the IM medium with a microporous filter membrane, culture in the dark at 28°C for 48 hours; after the co-cultivation, scrape the surface of the filter membrane with sterile water to collect transformed spores, add about 2-3ml of water to each dish, and spread evenly to 3-6 On an oat medium (containing 200ug/ml hygromycin, 50ug/ml tetracycline, and 100ug/ml streptomycin), hygromycin was used to screen transformants, and other antibiotics were used to inhibit Agrobacterium. After 3 to 5 days, the expanded colonies were picked and placed on the oat medium containing the same antibiotic.
1.4转化子的纯化及保存1.4 Purification and storage of transformants
按上述方法获得的转化子,在连续光照下培养7~10天产孢;用接种针蘸取孢子液在燕麦培养基上划线,28℃黑暗培养一天半后,挑取单菌落到含有潮霉素的燕麦培养基上,三天后观察生长状况,并加入已灭过菌的干燥滤纸片,7~10天后收集带有孢子、菌丝的滤纸片,装入已灭过菌的纸袋中,37℃干燥3~5天后,放干燥器保存备用.The transformants obtained by the above method were cultured under continuous light for 7-10 days to produce spores; the spore liquid was dipped with an inoculation needle and streaked on the oat medium. Mycelium oat culture medium, observe the growth after three days, and add sterilized dry filter paper, collect the filter paper with spores and hyphae after 7 to 10 days, put them into a sterilized paper bag, After drying at 37°C for 3-5 days, store in a desiccator for later use.
1.5接种感病水稻叶片,检测所获得转化子的致病表型1.5 Inoculate susceptible rice leaves and detect the pathogenic phenotype of the obtained transformants
接种实验在网室进行。选用对稻瘟菌菌株Y34感病的水稻品种日本晴(中国科学院遗传与发育研究所提供),两叶到三叶期接种,从播种开始计算,大约生长14~16天。为获得接种用孢子液,将已纯化的转化子接种到燕麦培养基上,28℃黑暗培养6~8天,三角刮棒刮去表面菌丝,连续光照三天,无菌水(含0.3%土温-20)收集孢子,Miracloth过滤,镜检,用血球计数器调节孢子浓度为0.5×106/ml。接种采用喷雾法,用真空泵或者香水瓶,将上述孢子液均匀细密地喷到叶片上,每次接种设正对照(Y34野生型)和负对照(含土温-20的无菌水)。接种完毕,置黑暗处,保温(25~30℃),保湿(相对湿度90%以上)24小时,然后取出,置于水池中,保温(18~32℃),保湿(60~90%)。一周后记录并分析发病情况。根据以上方法,得到一个致病力显著减弱的突变体,代号为M230,用该菌株接种叶片后,病斑少,且在发病早期便停止扩展,因此病斑很小。M230在燕麦培养基、完全培养基(CM)、V8番茄汁等固体培养基(Camplell soup公司,美国。用超纯水将离心上清按4∶1稀释)上生长均正常,但在V8番茄汁液体培养基中震荡培养,生长量则显著下降(见附图13),这表明该突变菌株对氧气的利用效率有所降低;与Y34相比较,菌落形态、分生孢子形态及数量没有差异,在附着孢形成率,现状,大小,黑色素沉淀,膨压大小方面差异也不显著。The inoculation experiment was carried out in the mesh room. The rice variety Nipponbare (provided by the Institute of Genetics and Development, Chinese Academy of Sciences) susceptible to Magnaporthe oryzae strain Y34 was selected, and inoculated at the two-leaf to three-leaf stage, and it grew for about 14 to 16 days from the time of sowing. In order to obtain the spore liquid for inoculation, inoculate the purified transformants on the oat medium, cultivate in the dark at 28°C for 6 to 8 days, scrape off the surface hyphae with a triangular scraper, light continuously for three days, and sterile water (containing 0.3% Tween-20) to collect spores, filter through Miracloth, examine under a microscope, and use a hemocytometer to adjust the spore concentration to 0.5×10 6 /ml. The inoculation adopts the spray method, and the above-mentioned spore liquid is evenly and finely sprayed on the leaves with a vacuum pump or a perfume bottle. A positive control (Y34 wild type) and a negative control (sterile water containing Tuwen-20) are set for each inoculation. After inoculation, put it in a dark place, keep warm (25-30°C), keep moist (more than 90% relative humidity) for 24 hours, then take it out, put it in a pool, keep warm (18-32°C), keep moist (60-90%). The onset was recorded and analyzed after one week. According to the above method, a mutant with significantly weakened pathogenicity was obtained, code-named M230. After the leaves were inoculated with this strain, there were few lesion spots, and they stopped expanding in the early stage of disease, so the lesion spots were very small. M230 grew normally on solid media such as oat medium, complete medium (CM), and V8 tomato juice (Camplell soup company, the United States. Dilute the centrifuged supernatant with ultrapure water at 4:1), but in V8 tomato juice Shake culture in juice liquid medium, growth amount then significantly declines (see accompanying drawing 13), this shows that this mutant strain reduces to some extent the utilization efficiency of oxygen; Compared with Y34, there is no difference in colony form, conidia form and quantity , there were no significant differences in sporulation formation rate, status, size, melanin precipitation, and turgor pressure.
2.T-DNA在致病突变体M230基因组中插入拷贝数及插入部位的分析2. Analysis of T-DNA insertion copy number and insertion site in the pathogenic mutant M230 genome
2.1M230菌株基因组DNA的提取2.1 Extraction of Genomic DNA of M230 Strain
稻瘟菌转化子菌丝接种到燕麦培养基上,28℃,培养4~7天,用V8番茄汁液体培养基,收集菌丝体,置于50ml离心管中,定容到15~20ml上述V8培养基(含75ug/ml潮霉素,50ug/ml四环素,100ug/ml链霉素),28℃,250rpm振荡培养2~4天。然后,用Miracloth真空过滤菌丝体,并用灭菌去离子水冲洗两次,吸去菌丝体残存液体,置研钵中,加液氮研磨成粉末,基因组DNA提取参照文献报道的方法(吴志红,2001)。1%琼脂糖凝胶电泳检测DNA提取质量,并根据与标准品λDNA的亮度对比,进行定量。Inoculate the mycelium of the blast fungus transformant on the oat medium, culture at 28°C for 4-7 days, use V8 tomato juice liquid medium to collect the mycelium, put it in a 50ml centrifuge tube, and set the volume to 15-20ml above V8 medium (containing 75ug/ml hygromycin, 50ug/ml tetracycline, and 100ug/ml streptomycin) was cultured at 28°C with shaking at 250rpm for 2 to 4 days. Then, vacuum-filter the mycelium with Miracloth, rinse twice with sterilized deionized water, suck off the residual liquid of the mycelium, put it in a mortar, add liquid nitrogen and grind it into powder, and the genomic DNA is extracted with reference to the method reported in the literature (Wu Zhihong , 2001). 1% agarose gel electrophoresis was used to detect the quality of DNA extraction, and quantification was carried out according to the brightness comparison with the standard lambda DNA.
2.2Southern blot分析检测突变体中T-DNA插入拷贝数2.2 Southern blot analysis to detect the copy number of T-DNA insertion in the mutant
各吸取1ug基因组DNA置两管中,分别加入10单位的PstI和EcoRI限制性内切酶和5ul 10X缓冲液,加无菌重蒸水至总体积为50ul,37℃酶切过夜,在1%琼脂糖凝胶上以40V电压电泳分离DNA。DNA的转膜,引物标记及杂交反应均参照《分子克隆》(Sambrook et al.,1989),选用T-DNA内潮霉素抗性基因的一部分作为探针,以HPTa,HPTb为引物(序列见表1),以pBHt2质粒DNA为模板,通过PCR扩增反应获得,该片段长度约为800bp,用α-32P-dCTP和Ready To Go DNA标记试剂盒(Promega,美国)进行标记。Southern blot分析表明,致病突变体M230菌株为单拷贝T-DNA插入(见附图4)。Pipette 1ug of genomic DNA into two tubes, add 10 units of PstI and EcoRI restriction enzymes and 5ul 10X buffer respectively, add sterile redistilled water to a total volume of 50ul, digest at 37°C overnight, at 1% DNA was separated by electrophoresis at 40V on an agarose gel. The transmembrane transfer of DNA, primer labeling and hybridization reactions were all referred to "Molecular Cloning" (Sambrook et al., 1989). A part of the hygromycin resistance gene in T-DNA was selected as a probe, and HPTa and HPTb were used as primers (sequence See Table 1), using pBHt2 plasmid DNA as a template, obtained by PCR amplification reaction, the fragment length is about 800bp, and labeled with α- 32 P-dCTP and Ready To Go DNA Labeling Kit (Promega, USA). Southern blot analysis showed that the pathogenic mutant M230 strain was a single-copy T-DNA insertion (see Figure 4).
表1普通PCR所用引物Table 1 Primers used in common PCR
2.3分析T-DNA在突变体菌株M230基因组中的插入部位:2.3 Analysis of the insertion site of T-DNA in the mutant strain M230 genome:
插入部位采用热不均一交错聚合酶链式反应(TAIL-PCR)结合测序进行分析。TAIL-PCR反应所需引物(见表2)及扩增流程皆参照E.D.Mulling(2001)等人所述方法进行。第三步扩增产物进行琼脂糖凝胶电泳,扩增条带用凝胶回收试剂盒(申能博彩公司,上海)回收,并连接到pGEM-Teasy载体上,然后测序(博亚公司,北京)(序列见图12)。将得到的序列到稻瘟菌基因组测序网站(www.broad.mit.edu/annotation/fungi/magnaporthe/index.html)进行比对,分析结果表明,M230突变体菌株中,T-DNA插入在已注释基因MG01622.4上游启动子区,距离起始密码子约180bp(见附图5)。注释表明,该基因具有URO-D功能域(Domain),为-URO-D基因,因此命名为MgURO-D。Insertion sites were analyzed using thermal heterogeneous interleaved polymerase chain reaction (TAIL-PCR) combined with sequencing. The primers (see Table 2) and the amplification process required for the TAIL-PCR reaction were carried out according to the method described by EDMulling (2001) et al. The amplified product in the third step was subjected to agarose gel electrophoresis, and the amplified band was recovered with a gel extraction kit (Shenergy Gaming Company, Shanghai), and connected to the pGEM-Teasy vector, and then sequenced (Boya Company, Beijing) ) (see Figure 12 for the sequence). The obtained sequence was compared to the Magnaporthe grisea genome sequencing website ( www.broad.mit.edu/annotation/fungi/magnaporthe/index.html ), and the analysis results showed that in the M230 mutant strain, the T-DNA was inserted in the Annotate the upstream promoter region of gene MG01622.4, which is about 180 bp away from the start codon (see Figure 5). The annotation shows that the gene has URO-D functional domain (Domain), which is -URO-D gene, so it is named MgURO-D.
表2TAIL-PCR反应所需引物Table 2 Primers required for TAIL-PCR reaction
3.MgURO-D基因的相关分析:3. Correlation analysis of MgURO-D gene:
该基因为单拷贝(从测序网站分析得知),位于I号染色体,全长1497bp(包括内含子),与存放在NCBI网站中的稻瘟菌EST序列进行比较发现,几条EST序列相互衔接,可以覆盖整个编码区,内含子与外显子分布情况,见附图6。取该基因的氨基酸序列到NCBI网站作Blast p,发现与其它生物尤其是与其它真菌相比较,该基因具有很高的同源性,见表3。将各种生物体的URO-D氨基酸序列放在一起,进行多序列比较发现,在催化活性部位的氨基酸残基都是保守的,见附图7。URO-D进化树见附图8。The gene is a single copy (according to the analysis of the sequencing website), located on chromosome I, with a full length of 1497bp (including introns). Compared with the EST sequence of Magnaporthe oryzae stored on the NCBI website, it is found that several EST sequences are mutually Cohesion can cover the entire coding region, and the distribution of introns and exons is shown in Figure 6. The amino acid sequence of the gene was taken to the NCBI website for Blast p, and it was found that compared with other organisms, especially other fungi, the gene has a high homology, as shown in Table 3. Putting together the URO-D amino acid sequences of various organisms and performing multiple sequence comparisons, it was found that the amino acid residues at the catalytic active site are all conserved, as shown in Figure 7. The phylogenetic tree of URO-D is shown in Figure 8.
表3MgURO-D蛋白与其它生物来源URO-D蛋白同源性比较Table 3 Homology comparison between MgURO-D protein and URO-D protein from other biological sources
紧接URO-D催化的反应之后,卟啉原氧化酶(coproporphyrinogenoxidase)催化亚铁血红素合成途径的第六步反应。对在不同条件下建立的EST库(网站:http://cogeme.ex.ac.uk/transcript.html)进行比较分析发现,以生长在水稻细胞壁为唯一碳源培养基上的菌丝为材料构建的EST库中,编码卟啉原氧化酶的基因的EST数量极显著地高于七个其它材料的EST库中该基因的EST数量(比如以生长在基本或者完全培养基上的菌丝为材料建立的EST库等)。由此可见,亚铁血红素合成途径在侵入水稻叶片的稻瘟菌中是非常活跃的,该途径对稻瘟菌在寄主体内的生存以及扩展是至关重要的。Immediately after the reaction catalyzed by URO-D, coproporphyrinogenoxidase catalyzes the sixth step reaction of the heme synthesis pathway. A comparative analysis of the EST library (website: http://cogeme.ex.ac.uk/transcript.html) established under different conditions found that the mycelia grown on rice cell wall as the only carbon source medium were used as materials In the constructed EST library, the EST number of the gene encoding porphyrinogen oxidase was significantly higher than the EST number of the gene in the EST library of seven other materials (for example, the hyphae grown on basic or complete medium were EST library established by materials, etc.). It can be seen that the heme synthesis pathway is very active in the blast fungus that invades rice leaves, and this pathway is crucial for the survival and expansion of the blast fungus in the host.
4.突变体M230的互补实验4. Complementation experiment of mutant M230
4.1MgURO-D基因真菌表达载体的构建4.1 Construction of MgURO-D gene fungal expression vector
用于表达载体构建的质粒为pSULFgfp(Ane Sesma,2004),MgURO-D基因片段由PCR扩增获得(引物见表1)。除包含整个编码区外,扩增产物还包括起始密码子上游1.1Kb及中止密码子下游0.5Kb,共3.2Kb,序列见附图9。在引物MgURO-DF和MgURO-DR的5’端分别有一个XbaI和EcoRI限制性酶切位点(斜体、下划线表示)。寡聚核苷酸引物由上海博亚生物公司合成,以Y34基因组DNA为模板,在含有1x扩增缓冲液,0.2uM/L扩增引物,0.2mM/L dNTPS,0.5单位高保真DNA聚合酶(Stratagene公司)的50uL扩增体系中进行PCR扩增反应。扩增条件为94℃预变性3分钟,94℃变性50秒,60℃退火50秒,72℃延伸3分30秒,循环30次,72℃再延伸8分钟,扩增产物运行1%琼脂糖凝胶电泳,条带胶回收如前所述,与pGEM-T easy载体16℃连接过夜,取2ul连接产物电击转化大肠杆菌DH10B感受态细胞(Invitrogen,美国),在含x-gal和IPTG的LB培养基(含100ug/ml氨卞青霉素)固体培养基上挑取白色菌落,经质粒提取,限制性内切酶分析,确定连接成功后,将该转化子交生物公司(三博远志,北京)测序,SEQ ID No.1。用XbaI、EcoRI限制性内切酶酶切该转化子的质粒,并与XbaI、EcoRI限制性内切酶酶切的pSULFgfp双元载体的大片段连接,电击转化大肠杆菌DH10B感受态细胞,在含50ug/ml卡那霉素的LB固体培养基上挑取菌落,经质粒提取,酶切分析后确定为转化子,命名为pCMgURO-D,图谱见附图10。将该载体电击转化到根癌农杆菌(A.Tumefaciens)Agl-1菌株中,经卡那霉素筛选,质粒分析证明其结构完全正确后,即可用于稻瘟菌转化。The plasmid used to construct the expression vector was pSULFgfp (Ane Sesma, 2004), and the MgURO-D gene fragment was amplified by PCR (see Table 1 for primers). In addition to including the entire coding region, the amplified product also includes 1.1 Kb upstream of the start codon and 0.5 Kb downstream of the stop codon, a total of 3.2 Kb. The sequence is shown in Figure 9. There are XbaI and EcoRI restriction enzyme sites (indicated in italics and underlined) at the 5' ends of primers MgURO-DF and MgURO-DR, respectively. Oligonucleotide primers were synthesized by Shanghai Boya Biological Co., Ltd., using Y34 genomic DNA as a template, in the presence of 1x amplification buffer, 0.2uM/L amplification primers, 0.2mM/L dNTPS, and 0.5 units of high-fidelity DNA polymerase (Stratagene company) 50uL amplification system for PCR amplification reaction. Amplification conditions are pre-denaturation at 94°C for 3 minutes, denaturation at 94°C for 50 seconds, annealing at 60°C for 50 seconds, extension at 72°C for 3 minutes and 30 seconds, 30 cycles, and extension at 72°C for 8 minutes, and the amplification product is run on 1% agarose Gel electrophoresis, strip gel recovery as described above, ligated with pGEM-T easy carrier overnight at 16°C, took 2ul ligation products and transformed E. Pick white colony on LB culture medium (containing 100ug/ml ampicillin) solid culture medium, through plasmid extraction, restriction endonuclease analysis, after confirming that the connection is successful, this transformant is handed over to biological company (Sanbo polygala, Beijing ) sequencing, SEQ ID No.1. Digest the plasmid of the transformant with XbaI and EcoRI restriction endonuclease, and connect with the large fragment of the pSULFgfp binary vector digested with XbaI and EcoRI restriction endonuclease, and transform Escherichia coli DH10B competent cells by electroporation. Colonies were picked on LB solid medium with 50ug/ml kanamycin, extracted from the plasmid, and determined to be transformants after enzyme digestion analysis, named pCMgURO-D, and the map is shown in Figure 10. The vector is transformed into A. tumefaciens (A. Tumefaciens) Agl-1 strain by electroporation, screened by kanamycin, and the plasmid analysis proves that its structure is completely correct, and then it can be used for transformation of Magnaporthe grisea.
4.2突变体菌株M230的互补转化4.2 Complementary transformation of mutant strain M230
用含有载体pCMgURO-D的农杆菌AGL-1菌株转化稻瘟菌突变体M230菌株的方法如前所述,不同之处在于共培养后的筛选培养基用DCM(Sweigard),抗生素则换为除草剂氯嘧磺隆(100ug/ml)(德地得农化产品营销公司,北京),转化子长出后,将其转入含同样除草剂的培养基上再筛选一次,然后转入燕麦培养基(200ug/ml潮霉素;100ug/ml链霉素,50ug/ml四环素),连续光照产孢,经划线纯化后,滤纸片收集,干燥保存备用.The method of transforming Magnaporthe grisea mutant M230 strain with the Agrobacterium AGL-1 strain containing the vector pCMgURO-D is as described above, the difference is that the selection medium after co-cultivation uses DCM (Sweigard), and the antibiotic is replaced by herbicide Chlorimuron-methyl (100ug/ml) (Dedi Agrochemical Products Marketing Company, Beijing), after the transformant grows, it is transferred to the medium containing the same herbicide and screened again, and then transferred to oat culture (200ug/ml hygromycin; 100ug/ml streptomycin, 50ug/ml tetracycline), sporulation was produced under continuous light, and after purification by streaking, they were collected by filter paper and stored dry for later use.
4.3转化子的PCR检测4.3 PCR detection of transformants
取2~4ng稻瘟菌转化子基因组DNA作为扩增模板,在含有1X扩增缓冲液,0.2uM/L扩增引物MgURO-DF2和MgURO-DR2(在MgURO-D基因内部,分别位于T-DNA插入位点两侧,序列见表1),0.2mM/LdNTPs,0.5单位TaqDNA聚合酶的20ul扩增体系中进行PCR扩增反应。扩增条件为:94℃预变性3分钟,94℃变性50秒,60℃退火50秒,72℃延伸5分钟,循环30次。取6ul扩增反应混合物,运行1%的琼脂糖凝胶电泳。预期扩增片段有两条,大小分别为4Kb,1.7Kb,电泳结果表明,接近50%(10/21)的转化子与预期相符,即两条带均扩出,其余则只有4Kb条带。由于除草剂氯嘧磺隆抗性基因ILV1是从稻瘟菌中克隆的,因此pCMgURO-D进入稻瘟菌后可能会发生同源重组,虽然仍能抗氯嘧磺隆除草剂,但用于互补的基因片段却遭丢失,因此,只能扩增出含有T-DNA的4Kb基因片段。Get 2~4ng of rice blast fungus transformant genomic DNA as amplification template, in containing 1X amplification buffer, 0.2uM/L amplification primers MgURO-DF2 and MgURO-DR2 (in MgURO-D gene interior, respectively located in T- On both sides of the DNA insertion site, the sequence is shown in Table 1), 0.2mM/LdNTPs, 0.5 unit TaqDNA polymerase 20ul amplification system for PCR amplification reaction. The amplification conditions were: pre-denaturation at 94°C for 3 minutes, denaturation at 94°C for 50 seconds, annealing at 60°C for 50 seconds, extension at 72°C for 5 minutes, and 30 cycles. Take 6ul of the amplification reaction mixture and run it on a 1% agarose gel. There are two expected amplified fragments, 4Kb and 1.7Kb in size, respectively. Electrophoresis results show that nearly 50% (10/21) of the transformants are in line with expectations, that is, both bands are amplified, and the rest only have 4Kb bands. Since the herbicide chlorimuron-methyl-resistant gene ILV1 was cloned from Magnaporthe grisea, homologous recombination may occur after pCMgURO-D enters Magnaporthe grisea, although it can still resist chlorimuron-methyl herbicide, it is used for The complementary gene fragment is lost, therefore, only the 4Kb gene fragment containing T-DNA can be amplified.
4.4接种感病水稻叶片,检测致病力4.4 Inoculation of susceptible rice leaves, detection of pathogenicity
从上述所获得的PCR结果与预期相符的十个转化子中随机挑取5个,培养,产孢,用于致病力检测,方法同上。结果表明,5个转化子的致病力,均与野生型Y34相近(见附图11),可见互补成功。由此可以得出结论,M230致病力之所以显著下降,是由于T-DNA插在MgURO-D基因上游启动子区,影响其表达引起的。From the ten transformants whose PCR results obtained above were in line with expectations, 5 were randomly selected, cultured, sporulated, and used for pathogenicity detection, and the method was the same as above. The results showed that the pathogenicity of the five transformants was similar to that of the wild-type Y34 (see Figure 11), indicating that the complementation was successful. It can be concluded that the reason why the pathogenicity of M230 is significantly reduced is that T-DNA is inserted in the upstream promoter region of MgURO-D gene, which affects its expression.
从本实施例可以看出,本发明要求保护的基因的失活直接导致稻瘟菌致病力的下降。因此,本发明要求保护的基因可以用于植物病害防治,特别是由稻瘟菌所导致的稻瘟病。另外,本发明要求保护的基因可以作为开发用于植物病害防治的药物的靶标。本领域技术人员可以根据本说明书的教导和启示,开发用于防治植物病害、特别是稻瘟病的药物。It can be seen from this example that the inactivation of the gene claimed in the present invention directly leads to the decrease of the pathogenicity of Magnaporthe oryzae. Therefore, the gene claimed in the present invention can be used for plant disease control, especially rice blast caused by blast fungus. In addition, the genes claimed in the present invention can be used as targets for the development of drugs for plant disease control. Those skilled in the art can develop medicines for preventing and treating plant diseases, especially rice blast, according to the teaching and inspiration of this manual.
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序列表sequence listing
<110>中国科学院微生物研究所<110>Institute of Microbiology, Chinese Academy of Sciences
<120>一种与致病力相关的稻瘟菌基因及其应用<120> A Magnaporthe grisea gene related to pathogenicity and its application
<130>IB056407<130>IB056407
<160>2<160>2
<170>PatentIn version 3.1<170>PatentIn version 3.1
<210>1<210>1
<211>1104<211>1104
<212>DNA<212>DNA
<213>Magnaporthe grisea<213>Magnaporthe grisea
<400>1<400>1
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aaagtcgaga gaccaccaat atggatcatg agacaggctg gccggtactt gcccgagtat 120aaagtcgaga gaccaccaat atggatcatg agacaggctg gccggtactt gcccgagtat 120
catgaggcca agggcaacag agactttttc gagtgctgtc gcgacccaga ggtggcctcc 180catgaggcca agggcaacag agactttttc gagtgctgtc gcgacccaga ggtggcctcc 180
accctgactc tacagcccat cgaccgcttc gatggcctgc ttgacgcctc catcatcttc 240accctgactc tacagcccat cgaccgcttc gatggcctgc ttgacgcctc catcatcttc 240
tccgacattc ttgtcatccc ccaggccatg ggcatggtcg ttgagatggt cgacaagaag 300tccgacattc ttgtcatccc ccaggccatg ggcatggtcg ttgagatggt cgacaagaag 300
ggcccgcact tcccaaaccc ccttcagtcg cccgacgatg gccagtacgc cgaggtgctc 360ggcccgcact tcccaaaccc ccttcagtcg cccgacgatg gccagtacgc cgaggtgctc 360
gcgcgggatg tggacgtctc caaggagctg gactacgtct acaaggccat caccctgacc 420gcgcgggatg tggacgtctc caaggagctg gactacgtct acaaggccat caccctgacc 420
cgtaagaagc ttcagggccg agtgccgctc attggcttct gcggtgctcc ctggaccctg 480cgtaagaagc ttcagggccg agtgccgctc attggcttct gcggtgctcc ctggaccctg 480
ttctgctaca tggtcgaggg tggtggcacc aagctcttca tccagagcaa gaaatggata 540ttctgctaca tggtcgaggg tggtggcacc aagctcttca tccagagcaa gaaatggata 540
ttcaggcatc ccgaggagag caagaagatg ctgcaaaaga tcgccgagct ctgcgtcgag 600ttcaggcatc ccgaggagag caagaagatg ctgcaaaaga tcgccgagct ctgcgtcgag 600
tatctcgccc tgcaggttca ggccggagca cagcttgtcc aagtctttga ctcttgggca 660tatctcgccc tgcaggttca ggccggagca cagcttgtcc aagtctttga ctcttgggca 660
ggagagctct ctcctgcatc cttcgagcag ttttctgctc cttacctgcg ctatatttcg 720ggagagctct ctcctgcatc cttcgagcag ttttctgctc cttacctgcg ctatatttcg 720
gaaaacctcc cgaaaaggct caaggagctg agtctggatc ccgtcccaat gattgttttc 780gaaaacctcc cgaaaaggct caaggagctg agtctggatc ccgtcccaat gattgttttc 780
cccaagggtg cctggttcgc cctggaggat tgctgcgcca tgggttacaa cgtcgttggg 840cccaagggtg cctggttcgc cctggaggat tgctgcgcca tgggttacaa cgtcgttggg 840
ctcgattggc tctacagtcc tgccaaggcc aaccaggtcc gaggagatcg ggaaatcgtc 900ctcgattggc tctacagtcc tgccaaggcc aaccaggtcc gaggagatcg ggaaatcgtc 900
ctgcagggca acgccgaccc tggagtgctc tacggcacta aggatgccat tacagctgct 960ctgcagggca acgccgaccc tggagtgctc tacggcacta aggatgccat tacagctgct 960
gtcaaggaca tggttgaagg atttgactgg aaggagaaga agaagggctg gatagtaaac 1020gtcaaggaca tggttgaagg atttgactgg aaggagaaga agaagggctg gatagtaaac 1020
ctgggccacg gaattacacc gctcgtcaac ccggacgacc tgaagtttta tctgcaggag 1080ctgggccacg gaattacacc gctcgtcaac ccggacgacc tgaagtttta tctgcaggag 1080
atccacagac aaaccaaaga ctag 1104atccacagac aaaccaaaga ctag 1104
<210>2<210>2
<211>367<211>367
<212>PRT<212>PRT
<213>Magnaporthe grisea<213>Magnaporthe grisea
<400>2<400>2
Met Gly His Thr Phe Glu Pro Leu Lys Asn Asp Leu Val Ile Arg ThrMet Gly His Thr Phe Glu Pro Leu Lys Asn Asp Leu Val Ile Arg Thr
1 5 10 151 5 10 15
Ala Trp Gly Gln Lys Val Glu Arg Pro Pro Ile Trp Ile Met Arg GlnAla Trp Gly Gln Lys Val Glu Arg Pro Pro Ile Trp Ile Met Arg Gln
20 25 3020 25 30
Ala Gly Arg Tyr Leu Pro Glu Tyr His Glu Ala Lys Gly Asn Arg AspAla Gly Arg Tyr Leu Pro Glu Tyr His Glu Ala Lys Gly Asn Arg Asp
35 40 4535 40 45
Phe Phe Glu Cys Cys Arg Asp Pro Glu Val Ala Ser Thr Leu Thr LeuPhe Phe Glu Cys Cys Arg Asp Pro Glu Val Ala Ser Thr Leu Thr Leu
50 55 6050 55 60
Gln Pro Ile Asp Arg Phe Asp Gly Leu Leu Asp Ala Ser Ile Ile PheGln Pro Ile Asp Arg Phe Asp Gly Leu Leu Asp Ala Ser Ile Ile Phe
65 70 75 8065 70 75 80
Ser Asp Ile Leu Val Ile Pro Gln Ala Met Gly Met Val Val Glu MetSer Asp Ile Leu Val Ile Pro Gln Ala Met Gly Met Val Val Glu Met
85 90 9585 90 95
Val Asp Lys Lys Gly Pro His Phe Pro Asn Pro Leu Gln Ser Pro AspVal Asp Lys Lys Gly Pro His Phe Pro Asn Pro Leu Gln Ser Pro Asp
100 105 110100 105 110
Asp Gly Gln Tyr Ala Glu Val Leu Ala Arg Asp Val Asp Val Ser LysAsp Gly Gln Tyr Ala Glu Val Leu Ala Arg Asp Val Asp Val Ser Lys
115 120 125115 120 125
Glu Leu Asp Tyr Val Tyr Lys Ala Ile Thr Leu Thr Arg Lys Lys LeuGlu Leu Asp Tyr Val Tyr Lys Ala Ile Thr Leu Thr Arg Lys Lys Leu
130 135 140130 135 140
Gln Gly Arg Val Pro Leu Ile Gly Phe Cys Gly Ala Pro Trp Thr LeuGln Gly Arg Val Pro Leu Ile Gly Phe Cys Gly Ala Pro Trp Thr Leu
145 150 155 160145 150 155 160
Phe Cys Tyr Met Val Glu Gly Gly Gly Thr Lys Leu Phe Ile Gln SerPhe Cys Tyr Met Val Glu Gly Gly Gly Thr Lys Leu Phe Ile Gln Ser
165 170 175165 170 175
Lys Lys Trp Ile Phe Arg His Pro Glu Glu Ser Lys Lys Met Leu GlnLys Lys Trp Ile Phe Arg His Pro Glu Glu Ser Lys Lys Met Leu Gln
180 185 190180 185 190
Lys Ile Ala Glu Leu Cys Val Glu Tyr Leu Ala Leu Gln Val Gln AlaLys Ile Ala Glu Leu Cys Val Glu Tyr Leu Ala Leu Gln Val Gln Ala
195 200 205195 200 205
Gly Ala Gln Leu Val Gln Val Phe Asp Ser Trp Ala Gly Glu Leu SerGly Ala Gln Leu Val Gln Val Phe Asp Ser Trp Ala Gly Glu Leu Ser
210 215 220210 215 220
Pro Ala Ser Phe Glu Gln Phe Ser Ala Pro Tyr Leu Arg Tyr Ile SerPro Ala Ser Phe Glu Gln Phe Ser Ala Pro Tyr Leu Arg Tyr Ile Ser
225 230 235 240225 230 235 240
Glu Asn Leu Pro Lys Arg Leu Lys Glu Leu Ser Leu Asp Pro Val ProGlu Asn Leu Pro Lys Arg Leu Lys Glu Leu Ser Leu Asp Pro Val Pro
245 250 255245 250 255
Met Ile Val Phe Pro Lys Gly Ala Trp Phe Ala Leu Glu Asp Cys CysMet Ile Val Phe Pro Lys Gly Ala Trp Phe Ala Leu Glu Asp Cys Cys
260 265 270260 265 270
Ala Met Gly Tyr Asn Val Val Gly Leu Asp Trp Leu Tyr Ser Pro AlaAla Met Gly Tyr Asn Val Val Gly Leu Asp Trp Leu Tyr Ser Pro Ala
275 280 285275 280 285
Lys Ala Asn Gln Val Arg Gly Asp Arg Glu Ile Val Leu Gln Gly AsnLys Ala Asn Gln Val Arg Gly Asp Arg Glu Ile Val Leu Gln Gly Asn
290 295 300290 295 300
Ala Asp Pro Gly Val Leu Tyr Gly Thr Lys Asp Ala Ile Thr Ala AlaAla Asp Pro Gly Val Leu Tyr Gly Thr Lys Asp Ala Ile Thr Ala Ala
305 310 315 320305 310 315 320
Val Lys Asp Met Val Glu Gly Phe Asp Trp Lys Glu Lys Lys Lys GlyVal Lys Asp Met Val Glu Gly Phe Asp Trp Lys Glu Lys Lys Lys Gly
325 330 335325 330 335
Trp Ile Val Asn Leu Gly His Gly Ile Thr Pro Leu Val Asn Pro AspTrp Ile Val Asn Leu Gly His Gly Ile Thr Pro Leu Val Asn Pro Asp
340 345 350340 345 350
Asp Leu Lys Phe Tyr Leu Gln Glu Ile His Arg Gln Thr Lys AspAsp Leu Lys Phe Tyr Leu Gln Glu Ile His Arg Gln Thr Lys Asp
355 360 365355 360 365
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CN103255150A (en) * | 2012-07-03 | 2013-08-21 | 吉林大学 | Magnaporthe grisea MoLON1 gene function and application thereof |
CN105483147B (en) * | 2016-01-22 | 2019-05-03 | 吉林大学 | A virulence-related gene BcUdc1 of Botrytis cinerea and its application |
CN110183521B (en) * | 2019-05-23 | 2021-05-28 | 华南农业大学 | Application of the rice blast gene MoRMD1 in regulating the pathogenicity of rice blast fungus |
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Mock H P.等人.Isolation,sequencing and expression ofcDNAsequencesencoding uroporphyrinogen decarboxylasefromtobacco andbarley.Plant Mol. Biol.28 2.1995,28(2),245. |
Mock H P.等人.Isolation,sequencing and expression ofcDNAsequencesencoding uroporphyrinogen decarboxylasefromtobacco andbarley.Plant Mol. Biol.28 2.1995,28(2),245. * |
徐吉臣等人.水稻尿卟啉原脱羧酶编码基因的鉴定和电子克隆.自然科学进展14 1.2004,14(1),64-69. |
徐吉臣等人.水稻尿卟啉原脱羧酶编码基因的鉴定和电子克隆.自然科学进展14 1.2004,14(1),64-69. * |
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