CN1970744A - Corn embryosperm ADP- glucose pyrophosphorylase mutant and its screening method and application - Google Patents
Corn embryosperm ADP- glucose pyrophosphorylase mutant and its screening method and application Download PDFInfo
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- CN1970744A CN1970744A CN 200610144383 CN200610144383A CN1970744A CN 1970744 A CN1970744 A CN 1970744A CN 200610144383 CN200610144383 CN 200610144383 CN 200610144383 A CN200610144383 A CN 200610144383A CN 1970744 A CN1970744 A CN 1970744A
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- agpase
- mutant
- corn
- adp
- small subunit
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Abstract
本发明公开了一种玉米胚乳ADP-葡萄糖焦磷酸化酶突变体及其筛选方法与应用。该筛选方法包括以下步骤:1)用盐酸羟胺突变剂对玉米胚乳AGPase大小亚基cDNA在70-80℃温浴条件下进行随机突变;2)将经突变的玉米胚乳AGPase大小亚基cDNA和作为对照的野生型玉米胚乳AGPase大小亚基cDNA分别转化大肠杆菌glgC突变菌株,筛选阳性单克隆;3)将阳性克隆划线接种于Conberg加富固体培养平板上,在35-39℃下培养;4)用碘-碘化钾溶液对在Conberg加富固体培养平板上长出的单菌落进行染色,与对照菌落的颜色进行比较,比对照颜色深的为突变体菌株,再经测序验证,得到玉米胚乳ADP-葡萄糖焦磷酸化酶突变体。本发明的玉米胚乳ADP-葡萄糖焦磷酸化酶突变体及其筛选方法将在玉米的品种改良中发挥重要作用。The invention discloses a corn endosperm ADP-glucose pyrophosphorylase mutant, a screening method and application thereof. The screening method comprises the following steps: 1) using hydroxylamine hydrochloride mutagen to randomly mutate the large and small subunit cDNA of corn endosperm AGPase under the condition of 70-80°C warm bath; 2) taking the mutated corn endosperm AGPase large and small subunit cDNA and the The large and small subunit cDNA of wild-type corn endosperm AGPase was transformed into Escherichia coli glgC mutant strains, and positive single clones were screened; 3) The positive clones were streaked on Conberg enriched solid culture plates and cultured at 35-39°C; 4) The single colony grown on the Conberg enriched solid culture plate was stained with iodine-potassium iodide solution, and compared with the color of the control colony, the mutant strain was darker than the control colony, and then verified by sequencing, the corn endosperm ADP- Glucose pyrophosphorylase mutants. The maize endosperm ADP-glucose pyrophosphorylase mutant and its screening method of the invention will play an important role in the improvement of maize varieties.
Description
技术领域technical field
本发明涉及植物的ADP-葡萄糖焦磷酸化酶突变体及其筛选方法与应用,特别是涉及来源于玉米胚乳的ADP-葡萄糖焦磷酸化酶突变体及其筛选方法与该突变体及其编码基因在玉米品种改良中的应用。The present invention relates to plant ADP-glucose pyrophosphorylase mutants and their screening methods and applications, in particular to ADP-glucose pyrophosphorylase mutants derived from corn endosperm and their screening methods and the mutants and their coding genes Application in corn variety improvement.
背景技术Background technique
淀粉在人类生活中占有重要地位,因此研究人员对于淀粉合成的研究一直没有中断过。在农业和林业领域,人们长期致力于提高农作物(如玉米等)产量,为持续增长的世界人口提供足够的食物和工业原料。同时,从可持续发展和环境保护的角度出发,对玉米生产的产量和质量的需求将会日益增加和提高。此外,因为淀粉含量高的植物细胞或器官吸收脂肪或煎炸油少,因而可用于生产低热量的“更健康”的产品。据统计,全世界80%以上的淀粉来自于玉米,其中美国的这一比例更高达95%以上,我国在这方面的研究还存在许多缺陷,因此,加速工业用高淀粉玉米品种的培育和改良已势在必行。Starch plays an important role in human life, so researchers have not stopped studying starch synthesis. In the fields of agriculture and forestry, people have long been committed to increasing the yield of crops (such as corn, etc.) to provide enough food and industrial raw materials for the continuously growing world population. At the same time, from the perspective of sustainable development and environmental protection, the demand for the yield and quality of corn production will increase and improve day by day. In addition, because plant cells or organs with a high starch content absorb less fat or frying oil, they can be used to produce "healthier" products that are lower in calories. According to statistics, more than 80% of the starch in the world comes from corn, and the proportion in the United States is as high as 95%. There are still many defects in the research in this area in our country. Therefore, it is necessary to accelerate the cultivation and improvement of high-starch corn varieties for industrial use. It is imperative.
在淀粉合成过程中涉及到一系列酶的参与:ADP-葡萄糖焦磷酸化酶(ADP-Glucose pyrophosphorylase,简写为AGPase)、淀粉合成酶(strarchsynthase,简写为SS)、淀粉分支酶(starch branching enzyme,简写为SBE)、淀粉去分支酶(starch debranching enzyme,简写为DBE)等。其中ADP-葡萄糖焦磷酸化酶是细菌糖原和植物淀粉合成的关键酶,催化1-P-Glucose和ATP生成的ADPG作为淀粉合成酶的底物参与直链淀粉和支链淀粉的合成,它的活性高低是决定淀粉积累速率的关键因素。在高等植物中,该酶具有一复杂的异源四聚体结构。到目前为止,AGPase已从玉米、小麦、菠菜、甜菜、拟南芥、大麦和马铃薯等多种植物中得到分离和纯化。A series of enzymes are involved in the process of starch synthesis: ADP-Glucose pyrophosphorylase (AGPase for short), starch synthase (SS for short), starch branching enzyme (starch branching enzyme, Abbreviated as SBE), starch debranching enzyme (starch debranching enzyme, abbreviated as DBE) and so on. Among them, ADP-glucose pyrophosphorylase is the key enzyme for the synthesis of bacterial glycogen and plant starch. ADPG, which catalyzes the generation of 1-P-Glucose and ATP, participates in the synthesis of amylose and amylopectin as the substrate of starch synthase. The activity level is the key factor to determine the rate of starch accumulation. In higher plants, the enzyme has a complex heterotetrameric structure. So far, AGPase has been isolated and purified from various plants such as corn, wheat, spinach, sugar beet, Arabidopsis, barley and potato.
AGPase活性的高低受多种因素的调节,其中别构调节是一种重要的调节方式,该方式通过调节激活剂3-PGA和抑制剂无机磷的比例来达到控制酶活性的目的。1969年,Cattaneo等(Cattaneo J,O.M.,Sigal N,Sanchez-Medina G,Puig J.Geniticstudies of E.coliK12 mutants with alterations in glycogenesis and propertiesof an altered AGPase.Biochem Biophys Res Commun.1969,34:694-701.)发现了大肠杆菌(E.coli)K12株系中的一个突变菌株,其糖原含量比野生型菌株提高了33%以上。进一步的研究证实突变体糖原提高的原因是由于控制糖原合成的关键酶AGPase发生了突变,改变了该酶对别构调节剂的反应,即对别构调节不敏感(LeeY M,K.A.,Preiss J.Amino acid sequence of an E.coli ADPglucose synthetaseallostefric mutants as deduced from the DNA sequence of the glgCgene.NucleicAcids Res,1987,15:10603.)。1992年,Monsanto公司的Stark等人(David M.Stark,Kurt P.Timmerman et al.Regulation of the amount of starch in planttissues by AGPase.Science,258:287-291.)将突变的AGPase基因转入马铃薯,获得了淀粉含量提高的转基因植株,平均含量比对照提高了35%,有的可达60%,这是利用基因工程手段提高植物淀粉含量第一个成功的例子。The level of AGPase activity is regulated by many factors, among which allosteric regulation is an important regulation method, which achieves the purpose of controlling enzyme activity by adjusting the ratio of activator 3-PGA and inhibitor inorganic phosphorus. 1969, Cattaneo etc. (Cattaneo J, O.M., Sigal N, Sanchez-Medina G, Puig J.Geniticstudies of E.coliK12 mutants with alterations in glycogenesis and properties of an altered AGPase. Biochem Biophys Res Commun.1964-371:69 .) found a mutant strain in the Escherichia coli (E.coli) K12 strain, and its glycogen content was increased by more than 33% compared with the wild-type strain. Further studies confirmed that the increase in glycogen in mutants was due to the mutation of AGPase, a key enzyme controlling glycogen synthesis, which changed the enzyme's response to allosteric regulators, that is, it was insensitive to allosteric regulation (LeeY M, K.A., Preiss J. Amino acid sequence of an E. coli ADPglucose synthetase allostefric mutants as deduced from the DNA sequence of the glgCgene. Nucleic Acids Res, 1987, 15: 10603.). In 1992, Stark et al. (David M.Stark, Kurt P.Timmerman et al.Regulation of the amount of starch in planttissues by AGPase.Science, 258:287-291.) of Monsanto Company transferred the mutated AGPase gene into potato , Obtained transgenic plants with increased starch content, the average content increased by 35% compared with the control, and some could reach 60%. This is the first successful example of using genetic engineering to increase the starch content of plants.
为深入研究AGPase的催化及调控性质,从而达到调控淀粉合成的目的,研究人员用化学修饰和突变的方法研究了该酶的底物及别构剂结合位点。结果证实,该酶含有多个配体结合位点,除底物ATP和G-1-P催化位点外,还存在激活剂3-PGA的结合位点及无机磷的抑制结合位点。同时,也得到了一些相应的突变体,如对激活剂3-PGA比较敏感的突变体(Greene,T.W.,I.H.Kavakli,et al.Generation ofup-regulated allosteric variants of potato ADP-glucose pyrophosphorylase byreversion genetics.″Proc Natl Acad Sci USA.1998,95(17):10322-10327.)等。但研究较多的是来源于马铃薯块茎的AGPase和菠菜叶片的AGPase,而玉米胚乳AGPase的突变体相对较少。用转座子诱导突变的方法诱导玉米胚乳中AGPase的大亚基基因(Shrunken-2)产生突变,突变株的种子重量比野生型增加了11-18%,进一步的分析表明,种子重量的增加是由于突变的AGPase降低了对抑制剂无机磷的敏感性(Giroux,M.J.,J.Shaw,et al.A single mutation that increases maizeseed weight.Proc Natl Acad Sci USA.1996,93(12):5824-5829.)。此外,玉米胚乳的AGPase是一热不稳定的酶,Green等(Greene,T.W.and L. C.Hannah.Enhanced stability of maize endosperm ADP-glucose pyrophosphorylase isgained through mutants that alter subunit interactions.″Proc Natl Acad SciUSA.1998,95(22):13342-13347.)利用突变技术得到了一个热稳定的突变体,分析结果表明热稳定的原因是由于大小亚基之间相互作用增强的结果。In order to study the catalytic and regulatory properties of AGPase in depth, so as to achieve the purpose of regulating starch synthesis, researchers used chemical modification and mutation methods to study the substrate and allosteric agent binding sites of the enzyme. The results confirmed that the enzyme contained multiple ligand binding sites, and besides the substrate ATP and G-1-P catalytic sites, there were also activator 3-PGA binding sites and inorganic phosphorus inhibitory binding sites. At the same time, some corresponding mutants have also been obtained, such as mutants sensitive to the activator 3-PGA (Greene, T.W., I.H.Kavakli, et al. Generation of up-regulated allosteric variants of potato ADP-glucose pyrophosphorylase byreversion genetics." Proc Natl Acad Sci USA.1998, 95 (17): 10322-10327.) etc. But more studies are AGPase derived from potato tubers and AGPase of spinach leaves, and there are relatively few mutants of corn endosperm AGPase. The method of transposon-induced mutation induces the large subunit gene (Shrunken-2) of AGPase in the maize endosperm to produce mutations, and the seed weight of the mutant strain increases by 11-18% compared with the wild type. Further analysis shows that the increase of the seed weight is As mutated AGPase reduces sensitivity to inhibitor inorganic phosphorus (Giroux, M.J., J.Shaw, et al. A single mutation that increases maizeseed weight. Proc Natl Acad Sci USA. 1996, 93(12): 5824-5829 .). In addition, the AGPase of maize endosperm is a thermolabile enzyme, Greene et al. Acad SciUSA.1998, 95(22): 13342-13347.) A thermally stable mutant was obtained by using mutation technology, and the analysis results showed that the thermal stability was due to the enhanced interaction between the large and small subunits.
虽然玉米胚乳的AGPase与马铃薯块茎和菠菜叶来源的AGPases在氨基酸序列上具有很高的同源性,但在亚细胞定位、调控性质以及热稳定性方面,玉米胚乳AGPase与二者来源的AGPase存在着很大的区别,如马铃薯块茎AGPase定位于储藏器官的淀粉体内,而玉米胚乳的AGPase主要定位于淀粉体外的胞质中;马铃薯块茎AGPase对激活剂和抑制剂相当敏感,在没有激活剂存在的情况下,其活性可以忽略不计(检测活性比较困难),而玉米胚乳AGPase不同,在无激活剂存在的情况下,酶活性仍然较高,而且激活剂的存在可以部分弥补抑制剂对活性的影响;此外,马铃薯AGPase可以受不同水平的调控,如转录水平、转录后水平以及翻译后还原修饰调控等。而在玉米的籽粒中,AGPase的大小亚基的含量变化与其编码基因Shrunken-2和Brittle-2的转录水平一致,目前还没有发现其它水平的调控;在热稳定性方面,由于马铃薯块茎AGPase两个小亚基N端均有半胱氨酸,因此形成了比较稳定的二硫键结构,而玉米AGPase的大小亚基均没有此结构。因此,深入对玉米胚乳AGPase的探讨不仅有助于揭示单子叶植物与双子叶植物在淀粉合成途径中的异同点,同时,对进一步提高玉米淀粉含量也有帮助。Although AGPase from maize endosperm has high amino acid sequence homology with AGPases from potato tubers and spinach leaves, in terms of subcellular localization, regulatory properties, and thermal stability, AGPase from maize endosperm and AGPase from both sources exist. There is a big difference, for example, the AGPase of potato tubers is located in the starch body of the storage organ, while the AGPase of the corn endosperm is mainly located in the cytoplasm outside the starch; the potato tuber AGPase is quite sensitive to activators and inhibitors, and in the absence of activators However, the activity of corn endosperm AGPase is negligible (it is difficult to detect the activity), and the enzyme activity is still high in the absence of activators, and the presence of activators can partially compensate for the inhibitor's effect on the activity. In addition, potato AGPase can be regulated by different levels, such as transcriptional level, post-transcriptional level and post-translational reductive modification regulation. In maize kernels, the changes in the content of the large and small subunits of AGPase are consistent with the transcription levels of its coding genes Shrunken-2 and Brittle-2, and no other level of regulation has been found so far; in terms of thermal stability, due to the two There is cysteine at the N-terminal of each small subunit, so a relatively stable disulfide bond structure is formed, while the large and small subunits of maize AGPase do not have this structure. Therefore, an in-depth study of corn endosperm AGPase will not only help to reveal the similarities and differences between monocots and dicots in the starch synthesis pathway, but also help to further increase the corn starch content.
发明内容Contents of the invention
本发明的目的是提供一个简便易行的筛选酶活性提高的玉米胚乳ADP-葡萄糖焦磷酸化酶突变体的方法。The purpose of the present invention is to provide a simple and feasible method for screening corn endosperm ADP-glucose pyrophosphorylase mutants with improved enzyme activity.
本发明所提供的筛选玉米胚乳ADP-葡萄糖焦磷酸化酶突变体的方法,包括以下步骤:The method for screening corn endosperm ADP-glucose pyrophosphorylase mutant provided by the present invention comprises the following steps:
1)用盐酸羟胺突变剂对玉米胚乳AGPase大小亚基基因(Sh2和Bt2)的cDNA在70-80℃温浴条件下进行随机突变;所述盐酸羟胺突变剂配方为:0.15-0.25g盐酸羟胺,125mM pH7.0的焦磷酸钠1.0-1.6mL,1M的NaCl0.2-0.4mL,500mM pH8.0的EDTA10-14μl,用无离子水定容至3mL;1) Use hydroxylamine hydrochloride mutagen to randomly mutate the cDNA of maize endosperm AGPase large and small subunit genes (Sh2 and Bt2) at 70-80°C in a warm bath; the formulation of the hydroxylamine hydrochloride mutagen is: 0.15-0.25g hydroxylamine hydrochloride, 125mM pH7.0 sodium pyrophosphate 1.0-1.6mL, 1M NaCl0.2-0.4mL, 500mM pH8.0 EDTA10-14μl, dilute to 3mL with deionized water;
2)将步骤1)中经突变的玉米胚乳AGPase大小亚基cDNA和作为对照的野生型玉米胚乳AGPase大小亚基cDNA分别转化大肠杆菌glgC突变菌株,筛选分别转化有经突变的玉米胚乳AGPase大小亚基cDNA和野生型玉米胚乳AGPase大小亚基cDNA的阳性单克隆;2) Transform the Escherichia coli glgC mutant strains with the mutated maize endosperm AGPase subunit cDNA and the wild-type maize endosperm AGPase subunit cDNA as a control in step 1), and screen for transformation with the mutated maize endosperm AGPase subunits respectively. Positive single clones of the base cDNA and wild-type maize endosperm AGPase large and small subunit cDNA;
3)将步骤2)筛选的阳性克隆接种于Conberg加富固体培养平板上,在35-39℃下培养12-24小时;所述Conberg加富固体培养基配方为:磷酸二氢钾8-9g,磷酸氢二钾10-12g,酵母提取物5-7g,葡萄糖8-12g,琼脂15-25g,用水定容至1L,最终pH7.0;3) Inoculate the positive clones screened in step 2) on a Conberg-enriched solid culture plate and culture at 35-39°C for 12-24 hours; the formula of the Conberg-enriched solid medium is: potassium dihydrogen phosphate 8-9g , dipotassium hydrogen phosphate 10-12g, yeast extract 5-7g, glucose 8-12g, agar 15-25g, dilute to 1L with water, final pH7.0;
4)用碘-碘化钾(I2-KI)溶液对在步骤3)中Conberg加富固体培养平板上长出的单菌落进行染色,与对照菌落的颜色进行比较,比对照颜色深的为突变体菌株,测序,得到玉米胚乳ADP-葡萄糖焦磷酸化酶突变体;所述碘-碘化钾溶液是含0.08-0.12mol/L碘和0.25-0.35mol/L碘化钾的水溶液。4) Use iodine-potassium iodide (I 2 -KI) solution to stain the single colony grown on the Conberg enriched solid culture plate in step 3), and compare it with the color of the control colony, and the color darker than the control is a mutant The bacterial strain is sequenced to obtain a corn endosperm ADP-glucose pyrophosphorylase mutant; the iodine-potassium iodide solution is an aqueous solution containing 0.08-0.12mol/L iodine and 0.25-0.35mol/L potassium iodide.
在上述筛选方法中,步骤1)中的温浴温度优选为75℃,盐酸羟胺突变剂的配方优选为:0.2084g盐酸羟胺,125mM的焦磷酸钠(pH7.0)1.2mL,1M的NaCl0.3mL,500mM的EDTA(pH8.0)12μl,无离子水1.488mL。In the above screening method, the warm bath temperature in step 1) is preferably 75°C, and the formula of the hydroxylamine hydrochloride mutagen is preferably: 0.2084g hydroxylamine hydrochloride, 1.2mL of sodium pyrophosphate (pH7.0) of 125mM, 0.3mL of 1M NaCl , 500mM EDTA (pH8.0) 12μl, deionized water 1.488mL.
步骤2)中经突变的玉米胚乳AGPase大小亚基cDNA和作为对照的野生型玉米胚乳AGPase大小亚基cDNA可通过含有经突变的玉米胚乳AGPase大小亚基cDNA或野生型玉米胚乳AGPase大小亚基cDNA的原核表达载体转化大肠杆菌glgC突变菌株,所述原核表达载体可为任意可在大肠杆菌中表达外源基因的原核表达载体,如pGEX-KG、pET28a、pET30a、pET-11c、pET-22b等。In step 2), the mutated maize endosperm AGPase large and small subunit cDNA and the wild-type maize endosperm AGPase large and small subunit cDNA as a control can be obtained by containing the mutated maize endosperm AGPase large and small subunit cDNA or the wild-type maize endosperm AGPase large and small subunit cDNA Escherichia coli glgC mutant strain transformed with the prokaryotic expression vector, the prokaryotic expression vector can be any prokaryotic expression vector that can express foreign genes in Escherichia coli, such as pGEX-KG, pET28a, pET30a, pET-11c, pET-22b, etc. .
步骤3)中的接种方式优选为划线接种,培养温度优选为37℃;Conberg加富固体培养基的配方优选为:磷酸二氢钾8.5g,磷酸氢二钾11g,酵母提取物6g,葡萄糖10g,琼脂20g,用水定容至11,最终pH7.0。The inoculation method in step 3) is preferably streak inoculation, and the culture temperature is preferably 37° C.; the formula of Conberg enriched solid medium is preferably: 8.5 g of potassium dihydrogen phosphate, 11 g of dipotassium hydrogen phosphate, 6 g of yeast extract, glucose 10g, 20g agar, dilute to 11 with water, final pH7.0.
步骤4)中的碘-碘化钾溶液的配方优选为:含0.1mol/L碘和0.3mol/L碘化钾的水溶液。The formula of the iodine-potassium iodide solution in step 4) is preferably: an aqueous solution containing 0.1mol/L iodine and 0.3mol/L potassium iodide.
此外,为筛选出活性更高的玉米胚乳ADP-葡萄糖焦磷酸化酶突变体,可将上述筛选方法中的步骤1)-4)重复1-3次。In addition, in order to screen out a corn endosperm ADP-glucose pyrophosphorylase mutant with higher activity, steps 1)-4) in the above screening method can be repeated 1-3 times.
用上述方法筛选获得的玉米胚乳ADP-葡萄糖焦磷酸化酶突变体也属于本发明的保护范围。The corn endosperm ADP-glucose pyrophosphorylase mutant obtained by screening with the above method also belongs to the protection scope of the present invention.
所述ADP-葡萄糖焦磷酸化酶突变体,名称为AGPase-10-3-53,可具有下述氨基酸残基序列之一:The ADP-glucose pyrophosphorylase mutant named AGPase-10-3-53 may have one of the following amino acid residue sequences:
1)序列表中的SEQ ID NO:1;1) SEQ ID NO: 1 in the sequence listing;
2)将序列表中SEQ ID NO:1的氨基酸残基序列经过一至十个氨基酸残基的取代、缺失或添加具有AGPase活性的蛋白质。2) The amino acid residue sequence of SEQ ID NO: 1 in the sequence listing is subjected to substitution, deletion or addition of one to ten amino acid residues, or a protein with AGPase activity.
序列表中的SEQ ID NO:1由475个氨基酸残基组成,与未突变的玉米胚乳ADP-葡萄糖焦磷酸化酶相比,自氨基端(N端)第323位由Ile突变为Met,自氨基端第499位由Met突变为Arg。The SEQ ID NO in the sequence listing: 1 is made up of 475 amino acid residues, compares with unmutated maize endosperm ADP-glucose pyrophosphorylase, from amino terminal (N terminal) 323rd by Ile mutation to Met, since The amino terminal position 499 was mutated from Met to Arg.
编码上述ADP-葡萄糖焦磷酸化酶突变体的基因(AGPase-10-3-53),是下述核苷酸序列之一:The gene (AGPase-10-3-53) encoding the above-mentioned ADP-glucose pyrophosphorylase mutant is one of the following nucleotide sequences:
1)序列表中SEQ ID NO:2的DNA序列;1) The DNA sequence of SEQ ID NO: 2 in the sequence listing;
2)编码序列表中SEQ ID NO:1的DNA序列;2) The DNA sequence of SEQ ID NO: 1 in the coding sequence list;
3)与序列表中SEQ ID NO:2限定的DNA序列具有90%以上同源性且具有AGPase活性的核苷酸序列;3) A nucleotide sequence having more than 90% homology with the DNA sequence defined by SEQ ID NO: 2 in the sequence listing and having AGPase activity;
4)在高严谨条件下可与序列表中的SEQ ID NO:2限定的DNA序列杂交的核苷酸序列。4) A nucleotide sequence that can hybridize with the DNA sequence defined by SEQ ID NO: 2 in the sequence listing under high stringency conditions.
所述高严谨条件为:用0.1×SSPE(或0.1×SSC),0.1%SDS的溶液,在65℃下杂交并洗膜。The high stringency conditions are: use 0.1×SSPE (or 0.1×SSC), 0.1% SDS solution, hybridize at 65° C. and wash the membrane.
序列表中的SEQ ID NO:2由1428个碱基组成,其编码序列为自5’端第1-1428位碱基,编码具有序列表中SEQ ID NO:1的氨基酸残基序列的蛋白质,自5’端第967-969位碱基编码突变氨基酸残基Met,自5’端第1345-1347位碱基编码突变氨基酸残基Arg。SEQ ID NO in the sequence listing: 2 consists of 1428 bases, its coding sequence is the 1-1428th base from the 5' end, encoding a protein with the amino acid residue sequence of SEQ ID NO: 1 in the sequence listing, Bases 967-969 from the 5' end encode the mutated amino acid residue Met, and bases 1345-1347 from the 5' end encode the mutated amino acid residue Arg.
含有所述ADP-葡萄糖焦磷酸化酶突变体基因AGPase-10-3-53的表达载体、转基因细胞系和宿主菌,以及扩增AGPase-10-3-53中任一片段的引物也属于本发明的保护范围。Expression vectors, transgenic cell lines and host bacteria containing the ADP-glucose pyrophosphorylase mutant gene AGPase-10-3-53, and primers for amplifying any fragment of AGPase-10-3-53 also belong to this invention. protection scope of the invention.
本发明的另一个目的是提供一种提高玉米种子淀粉含量的方法。Another object of the present invention is to provide a method for increasing the starch content of corn seeds.
本发明所提供的提高玉米种子淀粉含量的方法,是将所述ADP-葡萄糖焦磷酸化酶突变体基因AGPase-10-3-53导入玉米组织或细胞,玉米种子的淀粉含量得到提高。The method for increasing the starch content of corn seeds provided by the invention is to introduce the ADP-glucose pyrophosphorylase mutant gene AGPase-10-3-53 into corn tissues or cells, so that the starch content of corn seeds is increased.
所述ADP-葡萄糖焦磷酸化酶突变体基因AGPase-10-3-53可通过含有所述ADP-葡萄糖焦磷酸化酶突变体基因AGPase-10-3-53的植物表达载体导入玉米组织或细胞。The ADP-glucose pyrophosphorylase mutant gene AGPase-10-3-53 can be introduced into maize tissue or cells through a plant expression vector containing the ADP-glucose pyrophosphorylase mutant gene AGPase-10-3-53 .
用于构建所述植物表达载体的出发载体包括双元农杆菌载体和可用于植物微弹轰击的载体等。所述植物表达载体还可包含外源基因的3’端非翻译区域,即包含聚腺苷酸信号和任何其它的参与mRNA加工或基因表达的DNA片段。所述聚腺苷酸信号可引导聚腺苷酸加入到mRNA前体的3’端,如农杆菌冠瘿瘤诱导(Ti)质粒基因(如胭脂合成酶Nos基因)、植物基因(如大豆贮存蛋白基因)3’端转录的非翻译区等均具有类似功能。The starting vectors used to construct the plant expression vectors include binary Agrobacterium vectors and vectors that can be used for plant microprojectile bombardment and the like. The plant expression vector may also include the 3' untranslated region of the foreign gene, that is, the polyadenylation signal and any other DNA fragments involved in mRNA processing or gene expression. The polyadenylic acid signal can guide polyadenylic acid to be added to the 3' end of the mRNA precursor, such as Agrobacterium crown gall tumor induction (Ti) plasmid gene (such as nopain synthase Nos gene), plant gene (such as soybean storage The untranslated region transcribed at the 3' end of the protein gene) has similar functions.
使用AGPase-10-3-53构建植物表达载体时,在其转录起始核苷酸前可加上任何一种增强型启动子或诱导型启动子,如花椰菜花叶病毒(CAMV)35S启动子、根部特异表达启动子等,它们可单独使用或与其它的植物启动子结合使用;此外,使用本发明的基因构建植物表达载体时,还可使用增强子,包括翻译增强子或转录增强子,这些增强子区域可以是ATG起始密码子或邻接区域起始密码子等,但必需与编码序列的阅读框相同,以保证整个序列的正确翻译。所述翻译控制信号和起始密码子的来源是广泛的,可以是天然的,也可以是合成的。翻译起始区域可以来自转录起始区域或结构基因。When using AGPase-10-3-53 to construct a plant expression vector, any enhanced promoter or inducible promoter can be added before its transcription start nucleotide, such as the cauliflower mosaic virus (CAMV) 35S promoter , root-specific expression promoters, etc., which can be used alone or in combination with other plant promoters; in addition, when using the gene of the present invention to construct a plant expression vector, enhancers can also be used, including translation enhancers or transcription enhancers, These enhancer regions can be ATG initiation codons or adjacent region initiation codons, etc., but must be in the same reading frame as the coding sequence to ensure correct translation of the entire sequence. The sources of the translation control signals and initiation codons are extensive and can be natural or synthetic. The translation initiation region can be from a transcription initiation region or a structural gene.
具体来讲,用于构建所述植物表达载体的出发载体可为pCAMBIA2301、pBI121、pCAMBIA1301或pCAMBIA1300等。Specifically, the starting vector for constructing the plant expression vector may be pCAMBIA2301, pBI121, pCAMBIA1301 or pCAMBIA1300, etc.
为了便于对转基因植物细胞或植物进行鉴定及筛选,可对所用植物表达载体进行加工,如加入可在植物中表达的编码可产生颜色变化的酶或发光化合物的基因(GUS基因、萤光素酶基因等)、具有抗性的抗生素标记物(庆大霉素标记物、卡那霉素标记物等)或是抗化学试剂标记基因(如抗除莠剂基因)等。从转基因植物的安全性考虑,可不加任何选择性标记基因,直接以逆境筛选转化植株。In order to facilitate the identification and screening of transgenic plant cells or plants, the plant expression vector used can be processed, such as adding genes (GUS gene, luciferase gene, etc.) Genes, etc.), antibiotic resistance markers (gentamycin markers, kanamycin markers, etc.) or chemical resistance marker genes (such as herbicide resistance genes), etc. Considering the safety of the transgenic plants, the transformed plants can be screened directly by adversity without adding any selectable marker gene.
携带有本发明AGPase-10-3-53的植物表达载体可通过使用Ti质粒、Ri质粒、植物病毒载体、直接DNA转化、微注射、电导、农杆菌介导等常规生物学方法转化玉米组织或细胞,并将转化的玉米组织或细胞培育成植株。The plant expression vector carrying AGPase-10-3-53 of the present invention can transform corn tissue or cells, and growing the transformed maize tissue or cells into plants.
本发明提供了一种玉米胚乳ADP-葡萄糖焦磷酸化酶突变体及其筛选方法。该筛选方法是对野生型玉米胚乳AGPase基因随机突变后,转化大肠杆菌glgC突变菌株,再将重组子接种于Conberg加富固体培养基上,最后用碘染色法对长出的单克隆进行筛选,得到玉米胚乳ADP-葡萄糖焦磷酸化酶突变体。该筛选方法具有简单易行,稳定可靠的优点,此外,检测结果表明,用本发明筛选方法获得的玉米胚乳AGPase突变体的酶活性是野生型AGPase的134%,且该AGPase突变体在大肠杆菌中积累糖原的能力与野生型AGPase相比也得到显著提高;动力学及调控性质分析结果表明,与该突变体对底物(ATP和G-1-P)的亲和力增强,但对激活剂和抑制剂的敏感性与野生型AGPase相同,说明该突变体对底物亲和力增强是该突变体酶活提高及糖原积累能力提高的原因。本发明的玉米胚乳ADP-葡萄糖焦磷酸化酶突变体及其筛选方法将在玉米的品种改良中发挥重要作用,应用前景广阔。The invention provides a corn endosperm ADP-glucose pyrophosphorylase mutant and a screening method thereof. The screening method is to randomly mutate the wild-type corn endosperm AGPase gene, transform Escherichia coli glgC mutant strain, inoculate the recombinant on Conberg enriched solid medium, and finally screen the grown single clone by iodine staining method. Obtain corn endosperm ADP-glucose pyrophosphorylase mutant. The screening method has the advantages of simplicity, stability and reliability. In addition, the test results show that the enzymatic activity of the corn endosperm AGPase mutant obtained by the screening method of the present invention is 134% of that of wild-type AGPase, and the AGPase mutant is in Escherichia coli Compared with the wild-type AGPase, the ability of accumulating glycogen in AGPase was also significantly improved; the analysis of kinetics and regulatory properties showed that the affinity of the mutant to the substrate (ATP and G-1-P) was enhanced, but the affinity to the activator The sensitivity to inhibitors was the same as that of the wild-type AGPase, indicating that the enhanced affinity of the mutant to the substrate was the reason for the increased enzyme activity and glycogen accumulation ability of the mutant. The maize endosperm ADP-glucose pyrophosphorylase mutant and the screening method thereof of the invention will play an important role in the improvement of maize varieties, and have broad application prospects.
下面结合具体实施例对本发明做进一步详细说明。The present invention will be described in further detail below in conjunction with specific embodiments.
附图说明Description of drawings
图1为RT-PCR扩增的玉米胚乳AGPase大、小亚基基因cDNA的琼脂糖凝胶电泳检测结果Figure 1 shows the results of agarose gel electrophoresis detection of RT-PCR amplified maize endosperm AGPase large and small subunit gene cDNA
图2为玉米胚乳AGPase大小亚基基因原核表达载体pGEX-KG-Sh2-Bt2的部分结构示意图Figure 2 is a schematic diagram of the partial structure of the prokaryotic expression vector pGEX-KG-Sh2-Bt2 of the maize endosperm AGPase subunit gene
图3为玉米胚乳AGPase大小亚基基因在无glgC活性的大肠杆菌突变菌株中表达情况的SDS-PAGE检测结果及与glgC的功能互补实验结果Figure 3 is the SDS-PAGE detection results of the expression of the corn endosperm AGPase subunit gene in the E. coli mutant strain without glgC activity and the functional complementation experiment results with glgC
图4为玉米胚乳AGPase大小亚基经随机突变后的第一轮筛选结果Figure 4 shows the results of the first round of screening of the large and small subunits of maize endosperm AGPase after random mutation
图5为突变体10-3和10-3-53与对照的碘染色深浅比较结果Figure 5 is the comparison result of the iodine staining depth of mutants 10-3 and 10-3-53 and the control
图6为玉米胚乳AGPase突变体与其它来源的AGPase小亚基部分的氨基酸残基序列比对结果Fig. 6 is the amino acid residue sequence alignment result of the corn endosperm AGPase mutant and AGPase small subunit parts from other sources
图7为经纯化的玉米胚乳AGPase突变体AGPase-10-3-53的SDS-PAGE检测结果Figure 7 is the SDS-PAGE detection result of the purified corn endosperm AGPase mutant AGPase-10-3-53
具体实施方式Detailed ways
下述实施例中所用方法如无特别说明均为常规方法。所用引物合成和测序工作均由上海生工完成。The methods used in the following examples are conventional methods unless otherwise specified. The primer synthesis and sequencing work were completed by Shanghai Sangong.
实施例1、玉米胚乳ADP-葡萄糖焦磷酸化酶突变体及其编码基因的获得Example 1. Obtaining of Maize Endosperm ADP-Glucose Pyrophosphorylase Mutant and Its Encoding Gene
一、玉米胚乳AGPase大、小亚基cDNA的获得1. Obtaining the large and small subunit cDNA of maize endosperm AGPase
1、引物设计1. Primer design
根据玉米胚乳AGPase大亚基基因Shrunken-2和小亚基基因Brittle-2的cDNA序列(GenBank号分别为:M81603,AF334959)设计两对RT-PCR引物(Sh和Bt),同时为了便于载体构建,在设计引物时针对以下2点做了特殊设计:a.在Shrunken-2的5’端添加限制性内切酶NdeI的识别位点,3’端添加限制性内切酶SmaI和SacI的识别位点;b.因Brittle-25’端ATG的位置存在一个限制性内切酶NcoI识别位点,于是将Brittle-2自5’端第39位的A突变为C,去掉在该位点存在的第二个NcoI识别位点,并在Brittle-23’端添加限制性内切酶SacI识别位点,引物序列如下:Two pairs of RT-PCR primers (Sh and Bt) were designed according to the cDNA sequences of the corn endosperm AGPase large subunit gene Shrunken-2 and small subunit gene Brittle-2 (GenBank numbers: M81603, AF334959), and for the convenience of vector construction , when designing the primers, a special design was made for the following two points: a. The recognition site of the restriction endonuclease NdeI was added at the 5' end of Shrunken-2, and the recognition site of the restriction endonuclease SmaI and SacI was added at the 3' end of Shrunken-2 site; b. Because there is a restriction endonuclease NcoI recognition site at the ATG position at the 5' end of Brittle-2, the A at position 39 at the 5' end of Brittle-2 is mutated to C, and the presence at this site is deleted The second NcoI recognition site, and a restriction endonuclease SacI recognition site is added at the 3' end of Brittle-2, the primer sequence is as follows:
扩增玉米胚乳AGPase大亚基基因Shrunken-2 cDNA的引物对Sh:Primer pair Sh for amplifying maize endosperm AGPase large subunit gene Shrunken-2 cDNA:
Sh2F:5’-CCCATATGCAGTTTGCACTTGCATTGGACACG-3’Sh2F: 5'-CCCATATGCAGTTTGCACTTGCATTGGACACG-3'
Sh2R:5’-GAGAGCTCCCCGGGCTATATGACAGACCCATCGTTGATG-3’;Sh2R: 5'-GAGAGCTCCCCGGGCTATATGACAGACCCATCGTTGATG-3';
扩增玉米胚乳AGPase小亚基Brittle-2 cDNA的引物对Bt:Primer pair Bt for amplifying the small subunit Brittle-2 cDNA of maize endosperm AGPase:
Bt2F:5’-CAAACCATGGACATGGCTTTGGCGTCTAAAGCCTCCCCTCCGCCCTGGAATGCCACCGCCGCCG-3’Bt2F: 5'-CAAACCATGGACATGGCTTTGGCGTCTAAAGCCTCCCCTCCGCCCTGGAATGCCACCGCCGCCG-3'
Bt2R:5’-GAGCTCTCATATAACTGTTCCACTAGGGAGTAAAGC-3’。Bt2R: 5'-GAGCTCTCATATAACTGTTCCACTAGGGAGTAAAGC-3'.
2、第一链cDNA的合成2. Synthesis of first-strand cDNA
用Trizol RNA提取试剂盒(购自天为时代公司)并参照试剂盒说明书提取授粉后18天玉米种子的总RNA,并以此为模板反转录合成其第一链eDNA:取1μLOligo(dT)18加到10μL浓度为200ng/μL的总RNA溶液中,70℃反应5分钟后置于冰上冷却5分钟,然后用Promega公司的AMV Reverse Transcriptase并参照说明书加入以下成分:5×反转录缓冲液(试剂盒自带)5μL,dNTPs(每种10mM)2.5μL,RNasin核糖核酸酶抑制剂(浓度为50U/μL)1μL,AMV反转录酶(30U/μL)3μL,用DEPC处理水定容至25μL。反应条件为:室温10min,42℃60min,70℃10min,冰浴2min。Use the Trizol RNA extraction kit (purchased from Tianwei Times Company) and refer to the kit instructions to extract the total RNA of corn seeds 18 days after pollination, and use this as a template to reverse transcribe and synthesize the first-strand eDNA: take 1 μL of ligo(dT) 18 was added to 10 μL of total RNA solution with a concentration of 200 ng/μL, reacted at 70°C for 5 minutes, then cooled on ice for 5 minutes, and then used Promega’s AMV Reverse Transcriptase and added the following components according to the instructions: 5× reverse transcription buffer Solution (included in the kit) 5 μL, dNTPs (10 mM each) 2.5 μL, RNasin ribonuclease inhibitor (concentration: 50 U/μL) 1 μL, AMV reverse transcriptase (30 U/μL) 3 μL, dilute with DEPC-treated water Make up to 25 μL. The reaction conditions were: room temperature for 10 minutes, 42°C for 60 minutes, 70°C for 10 minutes, and ice bath for 2 minutes.
3、PCR扩增3. PCR amplification
以步骤2合成的第一链cDNA为模板,分别在引物对Sh和引物对Bt的引导下,PCR扩增Shrunken-2和Brittle-2 cDNA,反应体系为:10×缓冲液5μL,dNTPs(每种10mM)1μL,引物Sh2F(Bt2F)(浓度为10μM1μL,引物Sh2R(Bt2R)(浓度为10μM)1μL,Ex-Taq(5U/μL,TaKaRa公司)1μL,第一链cDNA(浓度为10ng/uL)5μL,用灭菌水定容至50μL。PCR反应条件为:先94℃5min;然后94℃1min,62℃45s,72℃2min,10个循环;再94℃1min,65℃45s,72℃2min,25个循环;最后72℃10min,4℃保存。反应结束后,对PCR扩增产物进行0.7%琼脂糖凝胶电泳检测,检测结果如图1所示(泳道Sh2:PCR扩增的Shrunken-2,泳道Bt2:PCR扩增的Brittle-2,经PCR扩增出约1.5kbp的Shrunken-2cDNA片段和1.4kbp的Brittle-2 cDNA片段,与预期结果相符。回收并纯化这两个目的片段,将其分别克隆入载体pGEM-T Easy(购自Promega公司)中,对含有Shrunken-2 cDNA片段的克隆载体用限制性内切酶BamHI和SmaI进行双酶切鉴定,经酶切获得了1.5kbp和3.0kbp的DNA片段,与预期结果相符;对含有Brittle-2 cDNA片段的克隆载体用限制性内切酶EcoRI进行单酶切鉴定,经酶切获得了1.4kbp的DNA片段,与预期结果相符:再将上述克隆质粒进行测序,测序结果表明,除了预期的Brittle-2自5’端第39位的碱基A突变为C外,其它序列均与GenBank上登录的序列一致,表明经RT-PCR扩增获得序列正确的玉米胚乳AGPase大亚基基因Shrunken-2和小亚基基因Brittle-2的cDNA。Using the first-strand cDNA synthesized in step 2 as a template, under the guidance of the primer pair Sh and the primer pair Bt, respectively, PCR amplified Shrunken-2 and Brittle-2 cDNA, the reaction system was: 10 × buffer 5 μL, dNTPs (per Seed 10mM) 1μL, primer Sh2F (Bt2F) (concentration is 10μM 1μL, primer Sh2R (Bt2R) (concentration is 10μM) 1μL, Ex-Taq (5U/μL, TaKaRa company) 1μL, first-strand cDNA (concentration is 10ng/uL ) 5 μL, dilute to 50 μL with sterilized water. The PCR reaction conditions are: first 94°C for 5 minutes; then 94°C for 1 minute, 62°C for 45 seconds, 72°C for 2 minutes, 10 cycles; then 94°C for 1 minute, 65°C for 45 seconds, and 72°C 2min, 25 cycles; last 10min at 72°C, stored at 4°C. After the reaction, the PCR amplified product was detected by 0.7% agarose gel electrophoresis, and the detection result is shown in Figure 1 (swimming lane Sh2: PCR amplified Shrunken -2, lane Bt2: Brittle-2 amplified by PCR, a Shrunken-2 cDNA fragment of about 1.5kbp and a Brittle-2 cDNA fragment of 1.4kbp were amplified by PCR, consistent with the expected results. Recover and purify these two target fragments , which were respectively cloned into the vector pGEM (R) -T Easy (purchased from Promega Company), the cloning vector containing the Shrunken-2 cDNA fragment was identified by double enzyme digestion with restriction endonucleases BamHI and SmaI, and obtained The DNA fragments of 1.5kbp and 3.0kbp were in line with the expected results; the cloning vector containing the Brittle-2 cDNA fragment was identified by single enzyme digestion with the restriction endonuclease EcoRI, and the DNA fragment of 1.4kbp was obtained after digestion, which was in line with the expected The results are consistent: the above-mentioned cloned plasmid was sequenced again, and the sequencing results showed that, except for the expected mutation of Brittle-2 from the 39th base A at the 5' end to C, the other sequences were consistent with the sequence registered on GenBank, indicating that the The cDNAs of large subunit gene Shrunken-2 and small subunit gene Brittle-2 of maize endosperm AGPase were amplified by RT-PCR.
二、玉米胚乳AGPase大小亚基基因在无glgC活性的大肠杆菌突变菌株中的异源表达2. Heterologous expression of large and small subunit genes of maize endosperm AGPase in E. coli mutant strains without glgC activity
1、原核表达载体pGEX-KG多克隆位点的改造1. Transformation of multiple cloning sites of prokaryotic expression vector pGEX-KG
由于马铃薯块茎AGPase大小亚基的N端和C端对该酶的调控性质起到重要作用,所以为使玉米胚乳AGPase大小亚基基因在利用载体pGEX-KG(购自Invitrogen公司,该载体的物理图谱、构建方法参见文献,Guan KL,Dixon JE.Eukaryotic proteinsexpressed in Escherichia coli:an improved thrombin cleavage and purificationprocedure of fusion proteins with glutathione S-transferase. Anal Biochem.1991,192(2):262-7)进行原核表达时不产生融合蛋白,现对该载体进行改造,使载体上的GST蛋白既能提前终止表达,不产生融合蛋白,又不影响目的蛋白的表达,设计的多克隆位点(MCS)如下:Because the N-terminus and the C-terminus of the large and small subunits of potato tuber AGPase play an important role in the regulatory properties of this enzyme, so in order to make the large and small subunit gene of corn endosperm AGPase use vector pGEX-KG (purchased from Invitrogen Company, the physical See literature for map and construction method, Guan KL, Dixon JE. Eukaryotic proteins expressed in Escherichia coli: an improved thrombin cleavage and purification procedure of fusion proteins with glutathione S-transferase. Anal Biochem. 1991, 192(2): 262-7) for prokaryotic No fusion protein is produced during expression. The carrier is now modified so that the expression of the GST protein on the carrier can be terminated early, no fusion protein is produced, and the expression of the target protein is not affected. The designed multiple cloning site (MCS) is as follows:
CTA GGA TCC TAA TAA CCG GGC AGG TCT AGA CCA TGG GAG CTC CTA GGA TCC TAA TAA CCG GGC AGG TCT AGA CCA TGG GAG CTC
BamHI stop codon Xbal Ncol SaclBamHI stop codon Xbal Ncol Sacl
CAC CAC CAC CAC CAC CAC AAG CTT ACC CAC CAC CAC CAC CAC CAC AAG CTT ACC
His Tag HindlllHis Tag Hindllll
合成该多克隆位点片段,对其用限制性内切酶BamHI和HindIII进行双酶切后,与经相同酶双酶切的原核表达载体pGEX-KG用T4 DNA连接酶相连,连接体系及反应条件如下:10×连接酶缓冲液2ul,pGEX-KG BamHI和HindIII双酶切片段2ul,MCSBamHI和HindIII双酶切片段10ul,T4 DNA连接酶(TaKaRa公司)1ul,灭菌蒸馏水5ul,16℃连接12-24小时。反应结束后,将连接产物转化大肠杆菌DH5a感受态细胞,将转化细胞在37℃下培养12-24小时,挑取在LB抗性平板(含100mg/L氨苄青霉素)上长出的单克隆,提质粒,分别用限制性内切酶BamHI、EcoRI、XhoI和XbaI进行单酶切鉴定,结果与预期结果相符,再挑取其中一个单克隆进行测序,测序结果表明新合成的多克隆位点片段替代了原载体中的多克隆位点,将改造后的载体pGEX-KG命名为pGEX-KG1。The multiple cloning site fragment was synthesized, after it was double-digested with restriction endonucleases BamHI and HindIII, it was connected with the prokaryotic expression vector pGEX-KG that had been double-digested with the same enzymes with T4 DNA ligase, and the ligation system and reaction The conditions are as follows: 10× ligase buffer 2ul, pGEX-KG BamHI and HindIII double-digested fragment 2ul, MCSBamHI and HindIII double-digested fragment 10ul, T4 DNA ligase (TaKaRa company) 1ul, sterilized distilled water 5ul, ligation at 16°C 12-24 hours. After the reaction, the ligation product was transformed into Escherichia coli DH5a competent cells, and the transformed cells were cultured at 37°C for 12-24 hours, and the single clone grown on the LB resistance plate (containing 100 mg/L ampicillin) was picked, The plasmids were extracted, and the restriction endonucleases BamHI, EcoRI, XhoI and XbaI were used for single-enzyme digestion and identification respectively. The results were in line with the expected results, and then one of the single clones was picked for sequencing. The sequencing results showed that the newly synthesized multiple cloning site fragments Instead of the multiple cloning sites in the original vector, the transformed vector pGEX-KG was named pGEX-KG1.
2、玉米胚乳AGPase大小亚基基因原核表达载体的构建2. Construction of the prokaryotic expression vector of maize endosperm AGPase large and small subunit genes
对步骤一扩增的玉米胚乳AGPase大亚基基因Shrunken-2的cDNA用限制性内切酶NdeI和SacI进行双酶切后,与经相同酶双酶切的载体pET30a(+)(购自Novagen公司)连接,得到含有Shrunken-2 cDNA的重组载体,命名为pET30Sh2;对步骤一扩增的玉米胚乳AGPase小亚基基因Brittle-2的cDNA用限制性内切酶NcoI和SacI进行双酶切后,与经相同酶双酶切的载体pET28a(+)(购自Novagen公司),得到含有Brittle-2 cDNA的重组载体,命名为pET28Bt2;再以pET28Bt2为模板,在引物SD:5’-CGGAGCTCTTTAAGAAGGAGATATACC-3’和Bt2R的引导下,PCR扩增Brittle-2的eDNA及其上游的核糖体结合位点,扩增结束后,回收约3.0kbp的目的片段,将其用限制性内切酶SacI进行单酶切后,与经相同酶酶切的重组载体pET30Sh2连接,经鉴定后,得到连接有玉米胚乳AGPase大小亚基基因及各自核糖体结合位点的重组载体,命名为pET30Sh2-Bt2;最后用限制性内切酶XbaI和SacI对pET30Sh2-Bt2进行双酶切,回收并纯化约3.0kbp的具有各自核糖体结合位点的玉米胚乳AGPase大小亚基基因,将其与经相同酶双酶切的载体pGEX-KG1连接,得到玉米胚乳AGPase大小亚基基因的原核表达载体,命名为pGEX-KG-Sh2-Bt2,其部分结构示意图见图2。After the cDNA of the corn endosperm AGPase large subunit gene Shrunken-2 amplified in step 1 was double-digested with restriction endonucleases NdeI and SacI, it was combined with the vector pET30a(+) (purchased from Novagen company) connection to obtain the recombinant vector containing Shrunken-2 cDNA, which is named as pET30Sh2; after the cDNA of the corn endosperm AGPase small subunit gene Brittle-2 amplified in step 1 is cut with restriction endonuclease NcoI and SacI after double enzyme digestion , and the carrier pET28a(+) (purchased from Novagen) through the double digestion with the same enzyme, to obtain a recombinant vector containing Brittle-2 cDNA, named pET28Bt2; Under the guidance of 3' and Bt2R, the eDNA of Brittle-2 and its upstream ribosome binding site were amplified by PCR. After the amplification was completed, the target fragment of about 3.0kbp was recovered, and it was subjected to a single step with the restriction endonuclease SacI. After digestion, it was connected with the recombinant vector pET30Sh2 digested with the same enzyme, and after identification, the recombinant vector connected with the large and small subunit genes of corn endosperm AGPase and their respective ribosome binding sites was obtained, which was named pET30Sh2-Bt2; The endonucleases XbaI and SacI double-digested pET30Sh2-Bt2, recovered and purified about 3.0kbp of the maize endosperm AGPase subunit gene with their respective ribosome binding sites, and combined it with the vector that had been double-digested with the same enzymes pGEX-KG1 was connected to obtain the prokaryotic expression vector of the maize endosperm AGPase subunit gene, which was named pGEX-KG-Sh2-Bt2, and its partial structure is shown in FIG. 2 .
3、玉米胚乳AGPase大小亚基基因在无glgC活性的大肠杆菌突变菌株中的异源表达及功能互补实验3. Heterologous expression and functional complementation of maize endosperm AGPase subunit gene in E. coli mutant strain without glgC activity
1)玉米胚乳AGPase大小亚基基因在无glgC活性的大肠杆菌突变菌株中的异源表达1) Heterologous expression of large and small subunit genes of maize endosperm AGPase in E. coli mutant strains without glgC activity
将步骤2构建的玉米胚乳AGPase大小亚基基因原核表达载体pGEX-KG-Sh2-Bt2转化无ADP-葡萄糖焦磷酸化酶活性的大肠杆菌突变菌株BL21-dglgC(菌株购自北京天为时代公司,筛选方法参见文献,Govons S,Vinopal R,Ingraham J,Preiss J.Isolation of mutants of Escherichia coli B altered in their ability tosynthesize glycogen.J Bacteriol.1969 Feb;97(2):970-972),筛选阳性克隆,挑取阳性单克隆接种于2mL LB液体培养基(含100μg/mL氨苄青霉素)中,于37℃振荡培养12-24小时,然后按1∶100的比例转接到50mL LB液体培养基(含100μg/mL氨苄青霉素)中,37℃振荡培养至OD600为0.3-0.5,加入不同浓度的IPTG(终浓度分别为0、0.005、0.01、0.1mM),继续于37℃振荡培养3-4小时诱导目标蛋白的表达,当菌液的OD600为1.0时结束培养。培养结束后,10000rpm离心5分钟,弃除上清液,向沉淀加入等体积的1×上样缓冲液(250mM Tris·HCl(pH6.8),500mM巯基乙醇,10%SDS,0.5%溴酚蓝,50%甘油,4℃保存,使用时稀释10倍),充分悬浮菌体,沸水中煮沸变性5min,再冰浴2min,然后4℃、12000rpm离心1分钟,上样进行SDS-PAGE检测,以BSA标准品为对照,检测结果见图3中的图A(泳道1为终浓度为0.1mmol/L IPTG诱导的pGEX-KG1,泳道2为终浓度为0.1mmol/L IPTG诱导的pGEX-KG,泳道3为没加IPTG诱导的pGEX-KG-Sh2-Bt2,泳道4为终浓度为0.005mmol/L IPTG诱导的pGEX-KG-Sh2-Bt2,泳道5为终浓度为0.01mmol/L IPTG诱导的pGEX-KG-Sh2-Bt2,泳道6为终浓度为0.1mmol/L IPTG诱导的pGEX-KG-Sh2-Bt2),经IPTG诱导,玉米胚乳AGPase 57kDa的大亚基和52kDa的小亚基蛋白均获得表达,且不同浓度IPTG(0,0.005,0.01,0.1mM)诱导的玉米胚乳AGPase大小亚基的表达量并没有明显差异,进一步的实验结果表明,所加IPTG浓度越高(如1mM),玉米胚乳AGPase大小亚基的表达量反而越低。The maize endosperm AGPase large and small subunit gene prokaryotic expression vector pGEX-KG-Sh2-Bt2 constructed in step 2 was transformed into Escherichia coli mutant strain BL21-dglgC without ADP-glucose pyrophosphorylase activity (the bacterial strain was purchased from Beijing Tianwei Times Company, See the literature for the screening method, Govons S, Vinopal R, Ingraham J, Preiss J. Isolation of mutants of Escherichia coli B altered in their ability to synthesize glycol. J Bacteriol. 1969 Feb; 97(2): 970-972), screening positive clones , pick positive single clones and inoculate them in 2mL LB liquid medium (containing 100 μg/mL ampicillin), shake culture at 37°C for 12-24 hours, and then transfer to 50mL LB liquid medium (containing 100 μg/mL ampicillin), shake culture at 37°C until OD 600 is 0.3-0.5, add different concentrations of IPTG (final concentrations are 0, 0.005, 0.01, 0.1 mM), and continue shaking culture at 37°C for 3-4 hours Induce the expression of the target protein, and end the culture when the OD 600 of the bacterial solution is 1.0. After the incubation, centrifuge at 10,000rpm for 5 minutes, discard the supernatant, and add an equal volume of 1× loading buffer (250mM Tris HCl (pH6.8), 500mM mercaptoethanol, 10% SDS, 0.5% bromophenol) to the pellet Blue, 50% glycerol, stored at 4°C, diluted 10 times when used), fully suspended the bacteria, boiled in boiling water for 5 minutes, then ice-bathed for 2 minutes, then centrifuged at 4°C, 12000rpm for 1 minute, and loaded for SDS-PAGE detection. With the BSA standard as a control, the test results are shown in Figure 3 in Figure A (swimming lane 1 is pGEX-KG1 induced by 0.1mmol/L IPTG at a final concentration, and pGEX-KG1 induced by 0.1mmol/L IPTG at a final concentration of swimming lane 2 , lane 3 is pGEX-KG-Sh2-Bt2 induced without IPTG, lane 4 is pGEX-KG-Sh2-Bt2 induced by a final concentration of 0.005mmol/L IPTG, lane 5 is induced by a final concentration of 0.01mmol/L IPTG pGEX-KG-Sh2-Bt2, lane 6 is the pGEX-KG-Sh2-Bt2 induced by IPTG with a final concentration of 0.1mmol/L), induced by IPTG, the large subunit of 57kDa and the small subunit protein of 52kDa of maize endosperm AGPase All were expressed, and there was no significant difference in the expression of the maize endosperm AGPase subunits induced by different concentrations of IPTG (0, 0.005, 0.01, 0.1mM). Further experimental results showed that the higher the added IPTG concentration (such as 1mM) , the expression level of maize endosperm AGPase subunits was lower.
2)与glgC(ADP-葡萄糖焦磷酸化酶基因,GenBank号:NC_000913)的功能互补实验2) Functional complementation experiment with glgC (ADP-glucose pyrophosphorylase gene, GenBank number: NC_000913)
挑取步骤1)获得的玉米胚乳AGPase大小亚基基因表达菌株的单菌落,接种于2mLLB液体培养基中,37℃振荡培养12-24小时,然后于Conberg加富培养基(磷酸二氢钾8.5g,磷酸氢二钾11g,酵母提取物6g,葡萄糖10g,琼脂15g,用水定容至1L,最终pH7)上进行划线,37℃培养12-24小时,用碘-碘化钾(I2-KI)溶液(0.1mol/L碘和0.3mol/L碘化钾)进行染色,结果如图3中的图B所示(1为对照:大肠杆菌glgC突变菌株,2为转化有玉米胚乳AGPase大小亚基基因的重组大肠杆菌glgC突变菌株),转化有玉米胚乳AGPase大小亚基基因的重组大肠杆菌glgC突变菌株生长状况良好,表明玉米胚乳AGPase大小亚基在大肠杆菌glgC突变菌株中共表达,可使该glgC突变菌株在Conberg加富培养基上合成糖原,互补了所缺失的glgC的功能。Pick the single colony of the maize endosperm AGPase large and small subunit gene expression strain obtained in step 1), inoculate it in 2mL LB liquid medium, shake and culture it at 37°C for 12-24 hours, and then enrich it in Conberg enriched medium (potassium dihydrogen phosphate 8.5 g, dipotassium hydrogen phosphate 11g, yeast extract 6g, glucose 10g, agar 15g, dilute to 1L with water, final pH7) for streaking, culture at 37°C for 12-24 hours, use iodine-potassium iodide (I 2 -KI ) solution (0.1mol/L iodine and 0.3mol/L potassium iodide) for staining, the results are shown in Figure B in Figure 3 (1 is the control: Escherichia coli glgC mutant strain, 2 is transformed with the corn endosperm AGPase subunit gene coli glgC mutant strain), the recombinant Escherichia coli glgC mutant strain transformed with the maize endosperm AGPase subunit gene grows well, indicating that the corn endosperm AGPase subunit co-expression in the E. coli glgC mutant strain can make the glgC mutation The strain synthesizes glycogen on Conberg's enriched medium, which complements the missing function of glgC.
三、玉米胚乳AGPase大小亚基的随机突变3. Random mutation of large and small subunits of maize endosperm AGPase
盐酸羟胺突变剂:0.2084g盐酸羟胺,1.488mL ddH2O,1.2mL 125mM焦磷酸钠(pH7.0),0.3mL 1M NaCl,12μl 500mM EDTA(pH8.0)。Hydroxylamine hydrochloride mutagen: 0.2084g hydroxylamine hydrochloride, 1.488mL ddH 2 O, 1.2mL 125mM sodium pyrophosphate (pH7.0), 0.3mL 1M NaCl, 12μl 500mM EDTA (pH8.0).
用限制性内切酶NdeI和SacI对pGEX-KG-Sh2-Bt2进行双酶切,回收并纯化约3.0kbp的玉米胚乳AGPase大小亚基cDNA片断,然后取盐酸羟胺突变剂1-3mL,将纯化的待突变的20-30μg玉米胚乳AGPase大小亚基cDNA片断加到1mL突变剂溶液中,75℃温浴条件下进行随机突变,分别于10、20、30、45、50、55、60、65、70、75、80、85、90、95、100、105、110、115、120、130分钟时各取出50ul,立即放置冰上,待样品取完后,统一回收DNA片断,然后将随机突变片段连接入原核表达载体pGEX-KG中,电转化大肠杆菌glgC突变菌株,用与步骤二相同的碘染色法筛选突变菌株。Digest pGEX-KG-Sh2-Bt2 with restriction endonucleases NdeI and SacI, recover and purify about 3.0kbp of maize endosperm AGPase large and small subunit cDNA fragments, then take 1-3mL of hydroxylamine hydrochloride mutagen, and purify 20-30 μg of maize endosperm AGPase large and small subunit cDNA fragments to be mutated were added to 1 mL mutagen solution, and random mutations were carried out under 75°C warm bath conditions, respectively at 10, 20, 30, 45, 50, 55, 60, 65, Take out 50ul each at 70, 75, 80, 85, 90, 95, 100, 105, 110, 115, 120, and 130 minutes, and place them on ice immediately. Connected into the prokaryotic expression vector pGEX-KG, electrotransformed Escherichia coli glgC mutant strain, and screened the mutant strain with the same iodine staining method as in step 2.
进行第一轮筛选时,大部分突变菌株经碘染色后呈浅黄色;一部分突变菌株经染色后的颜色与转化有野生型玉米胚乳AGPase大小亚基cDNA的大肠杆菌glgC突变菌株(对照)相似,呈棕色,只有少量的突变菌株经染色后变成深棕色。此轮筛选共挑选出大约12000个单克隆,接种于96孔板中,37℃下振荡培养12-24小时,然后划线于Conberg加富培养基上,再37℃培养12-24小时,用碘染色法进行筛选,经3轮筛选后,获得了2个碘染色颜色比对照深的突变菌株,分别为命名为8-2和10-3,第一轮筛选的最后结果如图4所示(CK:野生型菌株)。In the first round of screening, most of the mutant strains were light yellow after staining with iodine; the color of some mutant strains after dyeing was similar to that of the E. coli glgC mutant strain (control) transformed with the cDNA of the wild-type corn endosperm AGPase large and small subunits. Brown in color, only a small number of mutant strains become dark brown after staining. A total of about 12,000 single clones were selected in this round of screening, seeded in 96-well plates, cultured with shaking at 37°C for 12-24 hours, then streaked on Conberg enriched medium, and cultured at 37°C for 12-24 hours. Iodine staining method was used for screening. After 3 rounds of screening, two mutant strains with iodine staining color darker than the control were obtained, named 8-2 and 10-3 respectively. The final results of the first round of screening are shown in Figure 4 (CK: wild-type strain).
提取筛选到的2个突变菌株的质粒,进行测序,测序结果表明10-3和8-2均是玉米胚乳AGPase小亚基基因Brittle-2自5’端第1345-1347位由编码Met(M)的碱基突变为编码Arg(R)的碱基。The plasmids of the two mutant strains screened were extracted and sequenced, and the sequencing results showed that both 10-3 and 8-2 were the small subunit gene Brittle-2 of the maize endosperm AGPase from the 5' end of the 1345-1347th position encoded by Met (M ) is mutated into a base encoding Arg (R).
再以突变菌株10-3为原始材料,用与上述相同的方法进行第二次随机突变,以获得活性更高的突变菌株。结果共获得了4个较好的突变菌株,分别命名为10-3-14、10-3-24、10-3-33和10-3-53。经重复实验,突变菌株10-3-53重复性较好,其中,突变菌株10-3-53(53)与突变菌株10-3及对照菌株(CK)的碘染色情况如图5所示。Using the mutant strain 10-3 as the original material, the same method as above was used for the second random mutation to obtain a mutant strain with higher activity. Results Four good mutant strains were obtained, named 10-3-14, 10-3-24, 10-3-33 and 10-3-53 respectively. After repeated experiments, the mutant strain 10-3-53 had better reproducibility. Among them, the iodine staining conditions of the mutant strain 10-3-53(53), the mutant strain 10-3 and the control strain (CK) are shown in FIG. 5 .
提取突变菌株10-3-53的质粒,测序,结果该玉米胚乳AGPase大小亚基突变体基因是在突变菌株10-3的玉米胚乳AGPase大小亚基基因的基础上突变的,命名为AGPase-10-3-53,具有序列表中SEQ ID NO:2的核苷酸序列,由1428个碱基组成,其编码序列为自5’端第1-1428位碱基,编码具有序列表中SEQ ID NO:1的氨基酸残基序列的蛋白质,将该蛋白命名为AGPase-10-3-53,自5’端第967-969位碱基编码突变氨基酸残基Met(野生型为Ile),自5’端第1345-1347位碱基编码突变氨基酸残基Arg(野生型为Met)。AGPase-10-3-53与其它来源AGPase小亚基部分的氨基酸残基序列比对结果如图6所示,自氨基端第323位的Ile在玉米胚乳和叶、大麦胚乳和叶、小麦种子来源的AGPase中是高度保守的,而来源于所有已知的双子叶植物、玉米胚和水稻胚乳、叶的AGPase该位置的氨基酸残基是Val。The plasmid of the mutant strain 10-3-53 was extracted and sequenced. As a result, the corn endosperm AGPase subunit gene was mutated on the basis of the corn endosperm AGPase subunit gene of the mutant strain 10-3, named AGPase-10 -3-53, having the nucleotide sequence of SEQ ID NO: 2 in the sequence listing, consisting of 1428 bases, its coding sequence is the 1-1428th base from the 5' end, and the encoding has the SEQ ID in the sequence listing The protein of the amino acid residue sequence of NO: 1, the protein is named AGPase-10-3-53, from the 5' end 967-969 base coding mutant amino acid residue Met (wild type is Ile), from 5' Bases 1345-1347 at the 'end encode the mutated amino acid residue Arg (the wild type is Met). The amino acid residue sequence alignment results of AGPase-10-3-53 and other sources of AGPase small subunits are shown in Figure 6, from the 323rd position of the amino terminal Ile in maize endosperm and leaves, barley endosperm and leaves, wheat seeds The source of AGPase is highly conserved, and the amino acid residue at this position is Val in the AGPase derived from all known dicotyledonous plants, corn embryos, rice endosperms, and leaves.
实施例2、玉米胚乳AGPase突变体酶活及糖原含量测定Example 2, Determination of Enzyme Activity and Glycogen Content of Corn Endosperm AGPase Mutant
一、玉米胚乳AGPase突变体粗提液的AGPase活性测定1. Determination of AGPase activity in crude extract of corn endosperm AGPase mutant
1、玉米胚乳AGPase突变体粗提液的获得1. Obtaining crude extract of corn endosperm AGPase mutant
分别挑取含野生型玉米胚乳AGPase基因的大肠杆菌glgC突变菌株(对照)及实施例1经筛选获得的突变菌株10-3和10-3-53的单菌落,接种于LB液体培养基(含100μg/mL的氨苄青霉素)中,37℃培养12-24小时,然后按1∶100的比例将过夜培养的菌液转接到新鲜的LB液体培养基(含100μg/mL氨苄青霉素)中,在37℃、200rpm下振荡培养3-4小时至OD600为0.6-0.8后,加终浓度为0.1mM IPTG于常温下诱导12-24小时。培养结束后,6000rpm离心收集菌体,称重,-20℃放置12-24小时,向每克菌体中添加5mL蛋白提取缓冲液(50mM Hepes(pH7.5),5mM MgCl2,1mM EDTA(pH8.0),20%蔗糖,100μM ATP,30%硫酸铵,10mM Pi,5mM DTT,500μg/mL溶菌酶(Lysozyme),1μg/mL胃蛋白酶抑制(Pepstatin),1μg/mL亮抑酶肽(Leupeptin),1mM Benzamidine,1mM PMSF,10μg/mL丝氨酸蛋白酶抑制剂(Chymostatin)),重悬菌体,冰浴30min后超声10-15min,最后30000rpm离心20min,收集上清作为酶活测定的粗提液。Pick the Escherichia coli glgC mutant strain (control) containing the wild-type corn endosperm AGPase gene and the single colonies of the mutant strains 10-3 and 10-3-53 obtained through screening in Example 1, and inoculate them in LB liquid medium (containing 100 μg/mL ampicillin), cultured at 37°C for 12-24 hours, and then transferred the overnight cultured bacterial solution to fresh LB liquid medium (containing 100 μg/mL ampicillin) at a ratio of 1:100. Shake culture at 37°C and 200rpm for 3-4 hours until the OD 600 is 0.6-0.8, then add a final concentration of 0.1mM IPTG and induce at room temperature for 12-24 hours. After the cultivation, the cells were collected by centrifugation at 6000rpm, weighed, placed at -20°C for 12-24 hours, and 5 mL of protein extraction buffer (50 mM Hepes (pH7.5), 5 mM MgCl 2 , 1 mM EDTA ( pH8.0), 20% sucrose, 100 μM ATP, 30% ammonium sulfate, 10 mM Pi, 5 mM DTT, 500 μg/mL lysozyme (Lysozyme), 1 μg/mL pepsin inhibitor (Pepstatin), 1 μg/mL leupeptin ( Leupeptin), 1mM Benzamidine, 1mM PMSF, 10μg/mL serine protease inhibitor (Chymostatin)), resuspended bacteria, ice-bathed for 30min, ultrasonicated for 10-15min, and finally centrifuged at 30000rpm for 20min, and the supernatant was collected as a crude extract for enzyme activity determination liquid.
2、AGPase活性测定2. Determination of AGPase activity
取10μl步骤1获得的蛋白粗提液,与40μl反应缓冲液(80mM pH8.0 Hepes,5mM MgCl2,0.5mg/mL BSA,1mM ADPGlc,5mM 3磷酸甘油酸,2mM Dithiotreitol,10μM 1,6-2磷酸葡萄糖)混合,然后加入2mM焦磷酸钠溶液开始反应,25℃反应10分钟,煮沸5分钟,5000rpm离心5分钟,吸取上清,向上清中加入380μl ddH2O,测定OD340作为A1,然后再加入70μl反应缓冲液(100mM pH7.5 Hepes,0.1mg/mL BSA,5mM MgCl2,1mM NADP,0.8U/mL磷酸葡萄糖变位酶,0.7U/mL 6-磷酸葡萄糖脱氢酶),25℃反应10分钟,测OD340作为A2,以OD340的变化计算AGPase活性。Take 10 μl of crude protein extract obtained in step 1, mix with 40 μl reaction buffer (80 mM pH8.0 Hepes, 5 mM MgCl 2 , 0.5 mg/mL BSA, 1 mM ADPGlc, 5 mM 3-phosphoglycerate, 2 mM Dithiotreitol, 10 μM 1,6- 2 phosphate glucose) mixed, then add 2mM sodium pyrophosphate solution to start the reaction, react at 25°C for 10 minutes, boil for 5 minutes, centrifuge at 5000rpm for 5 minutes, absorb the supernatant, add 380μl ddH 2 O to the supernatant, measure OD 340 as A1, Then add 70 μl of reaction buffer (100 mM pH7.5 Hepes, 0.1 mg/mL BSA, 5 mM MgCl 2 , 1 mM NADP, 0.8 U/mL phosphoglucomutase, 0.7 U/mL 6-phosphate glucose dehydrogenase), React at 25°C for 10 minutes, measure OD 340 as A2, and calculate AGPase activity based on the change of OD 340 .
对照、10-3和10-3-53 AGPase粗提液的AGPase活性分别为0.058unit/mg、0.066unit/mg和0.078unit/mg,表明粗提液AGPase的活性高低与实施例1中的碘染色结果一致,突变菌株10-3 AGPase粗提液的AGPase活性是野生型玉米胚乳AGPase的113%,突变体菌株10-3-53 AGPase粗提液的AGPase活性是野生型玉米胚乳AGPase的134%。从碘染色结果和粗提液AGPase活性分析结果的一致性来看,本发明的筛选方法简单易行,可用于筛选AGPase活性提高的玉米胚乳AGPase突变体。The AGPase activity of contrast, 10-3 and 10-3-53 AGPase crude extract is respectively 0.058unit/mg, 0.066unit/mg and 0.078unit/mg, shows that the activity level of crude extract AGPase is the same as that of iodine in Example 1 The staining results were consistent, the AGPase activity of the mutant strain 10-3 AGPase crude extract was 113% of the wild-type corn endosperm AGPase, and the AGPase activity of the mutant strain 10-3-53 AGPase crude extract was 134% of the wild-type corn endosperm AGPase . From the consistency of the iodine staining result and the AGPase activity analysis result of the crude extract, the screening method of the present invention is simple and feasible, and can be used to screen corn endosperm AGPase mutants with improved AGPase activity.
2、糖原含量分析2. Glycogen content analysis
分别挑取含野生型玉米胚乳AGPase基因的大肠杆菌glgC突变菌株(对照)及实施例1经筛选获得的突变菌株10-3和10-3-53的单菌落,接种于Conberg加富液体培养基(含100μg/mL的氨苄青霉素)中,37℃培养12-24小时,然后12000rpm离心10min,收集菌体,称重后用蒸馏水重悬菌体,再在100℃下培养15min,然后加入DMSO和盐酸,60℃培养30min,用0.5M NaOH溶液调培养液pH值至4.5,加3-5U的淀粉糖苷酶,在醋酸钠(含有50mM醋酸纳,pH5.2)培养缓冲液中,55℃反应40min降解糖原,然后按葡萄糖的测定方法测定由糖原降解产生的葡萄糖含量:加10μl培养物于250ul糖反应缓冲液(100mM pH6.9 Imidazao-HCl,5mM MgCl2,2mM NAD,1mM ATP)中,加入1-2μl(1-2μ/μl)6-磷酸葡萄糖脱氢酶,室温反应10min,在340nm波长测吸光值,加入1-2μl己糖激酶(Hexokinase,HK),测葡萄糖含量。Pick the Escherichia coli glgC mutant strain (control) containing the wild-type corn endosperm AGPase gene and the single colonies of the mutant strains 10-3 and 10-3-53 obtained through screening in Example 1, respectively, and inoculate them in Conberg enriched liquid medium (containing 100 μg/mL ampicillin), culture at 37°C for 12-24 hours, then centrifuge at 12000rpm for 10min, collect the cells, resuspend the cells with distilled water after weighing, and culture at 100°C for 15min, then add DMSO and Hydrochloric acid, incubate at 60°C for 30min, adjust the pH value of the culture medium to 4.5 with 0.5M NaOH solution, add 3-5U amyloglucosidase, and react in the culture buffer of sodium acetate (containing 50mM sodium acetate, pH5.2) at 55°C Glycogen was degraded for 40 minutes, and then the glucose content produced by glycogen degradation was measured according to the glucose determination method: add 10 μl culture to 250ul sugar reaction buffer (100mM pH6.9 Imidazao-HCl, 5mM MgCl 2 , 2mM NAD, 1mM ATP) Add 1-2μl (1-2μ/μl) 6-phosphate glucose dehydrogenase, react at room temperature for 10min, measure absorbance at 340nm wavelength, add 1-2μl hexokinase (Hexokinase, HK), measure glucose content.
对照、10-3和10-3-53的糖原含量测定结果分别为32.6mg/g、46.2mg/g和71.9mg/g,结果与实施例1的碘染色结果基本一致,即碘染色浅的其糖原含量低,而碘染色深的其糖原含量相对较高,上述检测结果表明,与野生型玉米胚乳AGPase相比,用本发明方法筛选的玉米胚乳AGPase突变体的AGPase活性不仅得到了提高,而且其在大肠杆菌中积累糖原的能力也得到了相应的提高,进一步证明了该筛选方法的可靠性。The glycogen content measurement results of the control, 10-3 and 10-3-53 were 32.6mg/g, 46.2mg/g and 71.9mg/g respectively, and the results were basically consistent with the iodine staining results of Example 1, that is, the iodine staining was light Its glycogen content is low, and its glycogen content of iodine staining deep is relatively high, and above-mentioned detection result shows, compares with wild-type corn endosperm AGPase, the AGPase activity of the corn endosperm AGPase mutant screened with the inventive method not only obtains and its ability to accumulate glycogen in Escherichia coli has also been correspondingly improved, further proving the reliability of the screening method.
实施例3、玉米胚乳AGPase突变体的纯化Embodiment 3, the purification of corn endosperm AGPase mutant
1、蛋白的可溶性分析1. Protein Solubility Analysis
首先将实施例2获得的经IPTG诱导12-24小时的玉米胚乳AGPase突变菌株10-3-53的菌液于4℃、5000rpm离心5分钟,收集诱导细胞,弃除上清液,用1/10体积的TE(50mM Tris-HCl pH 8.0,0.2mM EDTA)重悬细胞沉淀,再加入10mg/mL溶菌酶(用新鲜的TE缓冲液配制)至终浓度为100μg/mL,然后加入1/10体积的Triton-100,30℃培养15分钟,将离心管放入冰水浴中,超声波处理,再4℃、12000rpm离心15分钟,取上清液和沉淀物分别进行SDS-PAGE电泳:上清液含有可溶性蛋白,可以加入等体积的2×SDS上样缓冲液后,煮沸5分钟,室温下12000rpm离心5分钟,取30mL上清液进行SDS-PAGE电泳分析;沉淀含有包涵体,可使用1×SDS上样缓冲液重悬后,煮沸5分钟,室温下12000rpm离心5分钟,取30mL上清液进行SDS-PAGE电泳分析。电泳分析结果表明,玉米胚乳AGPase突变体蛋白大部分存在于沉淀中(即胞内表达),只有少量蛋白存在于上清中。First, the bacterium liquid of the corn endosperm AGPase mutant strain 10-3-53 obtained in Example 2 induced by IPTG for 12-24 hours was centrifuged at 4° C. and 5000 rpm for 5 minutes to collect the induced cells, discard the supernatant, and use 1/ 10 volumes of TE (50mM Tris-HCl pH 8.0, 0.2mM EDTA) to resuspend the cell pellet, then add 10mg/mL lysozyme (prepared with fresh TE buffer) to a final concentration of 100μg/mL, then add 1/10 volume of Triton-100, incubate at 30°C for 15 minutes, put the centrifuge tube in an ice-water bath, ultrasonicate, then centrifuge at 12,000rpm at 4°C for 15 minutes, take the supernatant and precipitate for SDS-PAGE electrophoresis: supernatant Contains soluble protein, you can add an equal volume of 2×SDS loading buffer, boil for 5 minutes, centrifuge at 12000rpm for 5 minutes at room temperature, take 30mL supernatant for SDS-PAGE electrophoresis analysis; the precipitate contains inclusion bodies, you can use 1× After resuspension in SDS loading buffer, boil for 5 minutes, centrifuge at 12000rpm for 5 minutes at room temperature, and take 30mL supernatant for SDS-PAGE electrophoresis analysis. The results of electrophoresis analysis showed that most of the corn endosperm AGPase mutant protein existed in the pellet (that is, intracellular expression), and only a small amount of protein existed in the supernatant.
2、蛋白的大量诱导及粗提液的制备2. Mass induction of protein and preparation of crude extract
用与实施例2步骤1中相同的方法将含野生型玉米胚乳AGPase基因的大肠杆菌glgC突变菌株(对照)和突变菌株10-3-53的单菌落接种于LB液体培养基(含100μg/mL的氨苄青霉素)中,37℃培养12-24小时,然后按1∶100的比例将过夜培养的菌液转接到新鲜的LB液体培养基(含100μg/mL氨苄青霉素)中,在37℃、200rpm下振荡培养3-4小时至OD600为0.6-0.8后,加终浓度为0.1mM IPTG于常温下诱导12-24小时。培养结束后,6000rpm离心收集菌体,称重,-20℃放置12-24小时,向每克菌体中添加5mL蛋白提取缓冲液,重悬菌体,冰浴30min后超声10-15min,最后30000rpm离心20min,收集上清,将沉淀再用1/2体积的蛋白提取缓冲液重洗一次,合并上清,得到玉米胚乳AGPase的蛋白粗体液,备用。In the same method as in step 1 of Example 2, single bacterium colonies of Escherichia coli glgC mutant strain (control) and mutant strain 10-3-53 containing the wild-type corn endosperm AGPase gene were inoculated in LB liquid medium (containing 100 μg/mL Ampicillin), cultured at 37°C for 12-24 hours, then transferred the overnight cultured bacterial solution to fresh LB liquid medium (containing 100 μg/mL ampicillin) at a ratio of 1:100, at 37°C, Shake culture at 200 rpm for 3-4 hours until the OD 600 is 0.6-0.8, then add a final concentration of 0.1 mM IPTG and induce at room temperature for 12-24 hours. After the cultivation, the cells were collected by centrifugation at 6000rpm, weighed, and placed at -20°C for 12-24 hours. Add 5mL of protein extraction buffer to each gram of cells, resuspend the cells, and ultrasonicate for 10-15 minutes after ice bathing for 30 minutes. Centrifuge at 30000rpm for 20min, collect the supernatant, rewash the precipitate once with 1/2 volume of protein extraction buffer, combine the supernatants to obtain corn endosperm AGPase protein bold solution, and set aside.
3、可溶性蛋白的硫酸铵的分级沉淀3. Fractional precipitation of ammonium sulfate of soluble protein
分别用25%、35%、45%、55%、65%、75%的饱和硫酸铵溶液对步骤2获得的AGPase蛋白粗体液进行分级沉淀,各个浓度段的沉淀用透析缓冲液(50mMHepes(pH8.0),5mM MgCl2,1mM EDTA(pH8.0),20%Sucrose)悬浮,4℃分别透析12-24小时,然后取少量蛋白进行SDS-PAGE及AGPase活性测定,确定最适的硫酸铵沉淀浓度。结果表明大部分AGPase蛋白在45%-55%的硫酸铵浓度下沉淀下来,收集此浓度段的蛋白沉淀,将沉淀重悬于3mL的透析缓冲液中,4℃透析12-24小时。Respectively with 25%, 35%, 45%, 55%, 65%, 75% saturated ammonium sulfate solution, the AGPase protein crude liquid obtained in step 2 is carried out fractional precipitation, and the precipitation of each concentration section uses dialysis buffer (50mMHepes (pH8 .0), 5mM MgCl 2 , 1mM EDTA (pH8.0), 20% Sucrose) suspension, dialyzed at 4°C for 12-24 hours, and then take a small amount of protein for SDS-PAGE and AGPase activity determination to determine the most suitable ammonium sulfate precipitation concentration. The results showed that most of the AGPase protein was precipitated at 45%-55% ammonium sulfate concentration, and the protein precipitate in this concentration range was collected, resuspended in 3 mL of dialysis buffer, and dialyzed at 4°C for 12-24 hours.
4、离子交换层析4. Ion exchange chromatography
利用快速蛋白液相层析(简称FPLC)将步骤3经透析的蛋白样品先过离子交换层析柱子,样品过柱前,先用离子交换层析buffer A(50mM Hepes(pH8.0),1mM MgCl2,5mM EDTA(pH8.0),20%Sucrose,5mM Pi,0.5mM DTT)平衡Mono Q5/50柱子(购自Pharmacia公司),平衡稳定后再上样,上样前先将经透析的蛋白样品调pH值至8.0,上柱后先用5个柱床体积的离子交换层析buffer A继续漂洗柱子,直至流出液的紫外吸收值达到稳定,然后再用0-50%梯度的洗脱bufferB(50mM Hepes(pH7.0),1mM MgCl2,5mM EDTA(pH8.0),20%Sucrose,5mM Pi,0.5mM DTT,1M NaCl)洗脱柱子,流速8.0mL/min,收集流出液,迅速放于冰上暂时保存。取少量不同吸收峰的样品进行SDS-PAGE,结果AGPase蛋白大约在400mM NaCl时被洗脱下来。收集该峰值的样品流出液,测定AGPase酶活,结果表明此峰值下洗脱液的AGPase活性较高,合并该峰值的收集液,加固体硫酸铵至75%的终浓度进行样品的浓缩,用透析缓冲液重悬沉淀,4℃透析12-24小时,于-80℃保存备用。Use fast protein liquid chromatography (FPLC for short) to pass the protein sample dialyzed in step 3 through the ion-exchange chromatography column first, and before the sample passes through the column, first use ion-exchange chromatography buffer A (50mM Hepes (pH8. MgCl 2 , 5mM EDTA (pH8.0), 20% Sucrose, 5mM Pi, 0.5mM DTT) to equilibrate the Mono Q5/50 column (purchased from Pharmacia Company), and load the sample after the equilibrium is stable. Before loading the sample, the dialyzed Adjust the pH value of the protein sample to 8.0, and then use 5 column bed volumes of ion exchange chromatography buffer A to continue rinsing the column until the UV absorption value of the effluent reaches a stable value, and then use a 0-50% gradient for elution BufferB (50mM Hepes (pH7.0), 1mM MgCl 2 , 5mM EDTA (pH8.0), 20% Sucrose, 5mM Pi, 0.5mM DTT, 1M NaCl) eluted the column at a flow rate of 8.0mL/min, and collected the effluent, Quickly put on ice for temporary storage. A small amount of samples with different absorption peaks were taken for SDS-PAGE, and the result was that the AGPase protein was eluted at about 400mM NaCl. Collect the sample effluent of this peak, measure AGPase enzyme activity, the result shows that the AGPase activity of the eluent under this peak is higher, merge the collected liquid of this peak, add solid ammonium sulfate to the final concentration of 75% and carry out the concentration of sample, use The pellet was resuspended in dialysis buffer, dialyzed at 4°C for 12-24 hours, and stored at -80°C for later use.
5、凝胶过滤层析5. Gel filtration chromatography
将步骤4于-80℃保存的经透析的蛋白样品再过FPLC的Hiload 16/60 superdex75柱子(购自Pharmacia公司),上样前,先对灭菌的蒸馏水进行超虑处理,尽可能的去掉水中的气泡,然后用其洗涤柱子至稳定,再用凝胶过滤层析bufferC(50mMHepes(pH7.5),10mM MgCl2,5mM EDTA(pH8.0),5%Sucrose,200mM KCl,1mM DTT)平衡柱子,稳定后再上样,上样4mL(最大量为5mL),压力0.5Mpa,用同样的bufferC进行洗脱,0.2mL/管收集流出液,进行SDS-PAGE检测,确定目的蛋白的洗脱峰,洗脱蛋白的SDS-PAGE检测结果如图7所示(泳道M为Marker,泳道1-3为经纯化的目的蛋白AGPase-10-3-53),表明获得了纯度较高的目的蛋白,同时测定该峰值收集液的AGPase活性,最后合并有活性的部分,分装后于-80℃保存。Pass the dialyzed protein sample stored at -80°C in Step 4 through the Hiload 16/60 superdex75 column of FPLC (purchased from Pharmacia). Bubbles in water, and then use it to wash the column until it is stable, and then use gel filtration chromatography bufferC (50mM Hepes (pH7.5), 10mM MgCl 2 , 5mM EDTA (pH8.0), 5% Sucrose, 200mM KCl, 1mM DTT) Equilibrate the column, load the sample after it is stable, load 4mL of the sample (the maximum volume is 5mL), and use the same buffer C for elution, collect the effluent at 0.2mL/tube, and perform SDS-PAGE detection to determine the elution of the target protein. The SDS-PAGE detection results of the off-peak and eluted proteins are shown in Figure 7 (swimming lane M is Marker, and swimming lanes 1-3 are purified target protein AGPase-10-3-53), indicating that the target protein with higher purity has been obtained. At the same time, the AGPase activity of the peak collection liquid was measured, and finally the active fraction was combined and stored at -80°C after aliquoting.
实施例4、玉米胚乳AGPase突变体AGPase-10-3-53的动力学及调控性质分析Example 4. Kinetic and Regulatory Analysis of Maize Endosperm AGPase Mutant AGPase-10-3-53
对实施例3经纯化的用本发明方法筛选的玉米胚乳AGPase突变体AGPase-10-3-53及野生型玉米胚乳AGPase(对照)按如下方法进行动力学及调控性质分析:The purified maize endosperm AGPase mutant AGPase-10-3-53 and wild type maize endosperm AGPase (contrast) screened by the method of the present invention were analyzed for kinetics and regulatory properties as follows:
1)配制不同浓度的两种底物(ATP和1-P-G,购自Sigma公司),即0、500nM、1μM、10μm、50μM、100μm、500μm、1mM和5mM,分别在上述不同浓度的底物中测定AGPase-10-3-53及野生型玉米胚乳AGPase的酶活力,计算反应速度v,以1/v对1/[S]作图得一直线,其横轴截距为-1/Km,纵轴截距为1/Vmax。1) Prepare two substrates (ATP and 1-P-G, purchased from Sigma Company) with different concentrations, namely 0, 500nM, 1μM, 10μm, 50μM, 100μm, 500μm, 1mM and 5mM, respectively in the above-mentioned different concentrations of substrates The enzyme activity of AGPase-10-3-53 and wild-type corn endosperm AGPase was measured in the medium, and the reaction velocity v was calculated, and a straight line was obtained by plotting 1/v against 1/[S], and the intercept of the horizontal axis was -1/Km , the intercept of the vertical axis is 1/Vmax.
不同底物(ATP和1-P-G)下玉米胚乳AGPase突变体AGPase-10-3-53及野生型玉米胚乳AGPase的酶学动力学常数如表1所示,与野生型玉米胚乳AGPase比较,本发明的突变体AGPase-10-3-53对底物的亲和力增加,分析引起该突变体对底物亲和力增加的原因,可能与经突变后Shrunken-2和Brittle-2大小两个亚基相互作用增强有关,因为小亚基自氨基端第323位的突变位点Ile位于由55个氨基酸残基形成的“motif”结构内,该“motif”结构的作用是调控大小两个亚基之间的相互作用(Joanna M.Cross,Maureen Clancy,Janine R,Shaw et al.A polymorphic motifin the small subunit of AGPase modulates interactions between the small andlarge subunits.The Plant Journal.2005,41,501-511) 。The enzymatic kinetic constants of maize endosperm AGPase mutant AGPase-10-3-53 and wild-type maize endosperm AGPase under different substrates (ATP and 1-P-G) are shown in Table 1. Compared with wild-type maize endosperm AGPase, this The invented mutant AGPase-10-3-53 has an increased affinity to the substrate, and the cause of the increased affinity of the mutant to the substrate is analyzed, which may interact with the two subunits of Shrunken-2 and Brittle-2 after the mutation Enhancement, because the mutation site Ile from the 323rd position of the amino terminal of the small subunit is located in the "motif" structure formed by 55 amino acid residues, and the role of the "motif" structure is to regulate the size of the two subunits Interactions (Joanna M. Cross, Maureen Clancy, Janine R, Shaw et al. A polymorphic motif the small subunit of AGPase modulates interactions between the small and large subunits. The Plant Journal. 2005, 41, 501-511).
表1 不同底物下玉米胚乳AGPase突变体AGPase-10-3-53及野生型玉米胚乳Table 1 Maize endosperm AGPase mutant AGPase-10-3-53 and wild type maize endosperm under different substrates
AGPase的酶学动力学常数Enzyme Kinetic Constants of AGPase
2)配制不同浓度的激活剂3-磷酸甘油酸(购自Sigma公司)和抑制剂无机磷(购自Sigma公司)的浓度,即0mM、0.05mM、0.1mM、0.25mM、0.5mM、1mM、2.5mM、5mM和10mM,分别在上述不同浓度的激活剂或抑制剂中测定AGPase-10-3-53及野生型玉米胚乳AGPase的酶活力,以检测不同浓度的激活剂或抑制剂对酶活力的影响。2) prepare the concentration of activator 3-phosphoglycerate (purchased from Sigma Company) and inhibitor inorganic phosphorus (purchased from Sigma Company) of different concentrations, namely 0mM, 0.05mM, 0.1mM, 0.25mM, 0.5mM, 1mM, 2.5mM, 5mM and 10mM, measure the enzyme activity of AGPase-10-3-53 and wild-type corn endosperm AGPase in the above-mentioned different concentrations of activators or inhibitors, respectively, to detect the effect of different concentrations of activators or inhibitors on enzyme activity Impact.
检测结果表明,本发明玉米胚乳AGPase突变体AGPase-10-3-53对激活剂和抑制剂的敏感性同野生型玉米胚乳AGPase,证明玉米胚乳AGPase突变体AGPase-10-3-53对底物亲和力增强是该突变体酶活提高及糖原积累能力提高的原因。The test results show that the sensitivity of the corn endosperm AGPase mutant AGPase-10-3-53 of the present invention to activators and inhibitors is the same as that of the wild type corn endosperm AGPase, which proves that the corn endosperm AGPase mutant AGPase-10-3-53 is sensitive to the substrate The enhanced affinity is the reason for the improved enzyme activity and glycogen accumulation ability of the mutant.
序列表sequence listing
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Ile Pro Val Ser Asn Cys Leu Asn Ser Asn Ile Ser Lys Ile Tyr ValIle Pro Val Ser Asn Cys Leu Asn Ser Asn Ile Ser Lys Ile Tyr Val
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Ile Gly Thr Ile Ala Ala Phe Tyr Asn Ala Asn Leu Gly Ile Thr LysIle Gly Thr Ile Ala Ala Phe Tyr Asn Ala Asn Leu Gly Ile Thr Lys
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Lys Pro Met Pro Asp Phe Ser Phe Tyr Asp Arg Phe Ala Pro Ile TyrLys Pro Met Pro Asp Phe Ser Phe Tyr Asp Arg Phe Ala Pro Ile Tyr
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Thr Gln Pro Arg His Leu Pro Pro Ser Lys Val Leu Asp Ala Asp ValThr Gln Pro Arg His Leu Pro Pro Ser Lys Val Leu Asp Ala Asp Val
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Thr Asp Ser Val Ile Gly Glu Gly Cys Val Ile Lys Asn Cys Lys IleThr Asp Ser Val Ile Gly Glu Gly Cys Val Ile Lys Asn Cys Lys Ile
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Asn His Ser Val Val Gly Leu Arg Ser Cys Ile Ser Glu Gly Ala IleAsn His Ser Val Val Gly Leu Arg Ser Cys Ile Ser Glu Gly Ala Ile
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Ile Glu Asp Ser Leu Leu Met Gly Ala Asp Tyr Tyr Glu Thr Glu AlaIle Glu Asp Ser Leu Leu Met Gly Ala Asp Tyr Tyr Glu Thr Glu Ala
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Asp Lys Lys Leu Leu Ala Glu Lys Gly Gly Ile Pro Ile Gly Ile GlyAsp Lys Lys Leu Leu Ala Glu Lys Gly Gly Ile Pro Ile Gly Ile Gly
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Lys Asn Ser Cys Ile Arg Arg Ala Ile Ile Asp Lys Asn Ala Arg IleLys Asn Ser Cys Ile Arg Arg Ala Ile Ile Asp Lys Asn Ala Arg Ile
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| CN101580822B (en) * | 2008-05-14 | 2011-07-20 | 中国农业大学 | ADP-glucose pyrophosphorylase mutant, encoding genes thereof and application |
| CN105087516A (en) * | 2015-08-12 | 2015-11-25 | 广东省农业科学院作物研究所 | ADP-glucose pyrophosphorylase mutant and screening method and application thereof |
| CN107699582A (en) * | 2017-10-25 | 2018-02-16 | 南京固山生物技术有限公司 | A kind of starch quality improvement recombination GBSSIP:GlgC and its application |
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| CN101580822B (en) * | 2008-05-14 | 2011-07-20 | 中国农业大学 | ADP-glucose pyrophosphorylase mutant, encoding genes thereof and application |
| CN105087516A (en) * | 2015-08-12 | 2015-11-25 | 广东省农业科学院作物研究所 | ADP-glucose pyrophosphorylase mutant and screening method and application thereof |
| CN105087516B (en) * | 2015-08-12 | 2020-07-07 | 广东省农业科学院作物研究所 | A kind of ADP-glucose pyrophosphorylase mutant and its screening method and application |
| CN107699582A (en) * | 2017-10-25 | 2018-02-16 | 南京固山生物技术有限公司 | A kind of starch quality improvement recombination GBSSIP:GlgC and its application |
| CN110982826A (en) * | 2019-11-22 | 2020-04-10 | 中国农业大学 | Cloning, functional study and marker mining of a gene ZmDek605 that controls maize kernel development |
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