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CN1316515A - Human liver cancer related cancer suppressing protein and its coding sequence - Google Patents

Human liver cancer related cancer suppressing protein and its coding sequence Download PDF

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CN1316515A
CN1316515A CN01105340A CN01105340A CN1316515A CN 1316515 A CN1316515 A CN 1316515A CN 01105340 A CN01105340 A CN 01105340A CN 01105340 A CN01105340 A CN 01105340A CN 1316515 A CN1316515 A CN 1316515A
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halc
sequence
protein
polypeptide
human
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徐志刚
许相儒
肖华胜
张新
程志红
陈竺
韩泽广
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NANFANG RESEARCH CENTRE STATE HUMAN GENE GROUP
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NANFANG RESEARCH CENTRE STATE HUMAN GENE GROUP
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Abstract

本发明提供了一种在人体肝中表达的新的人hALC蛋白及其编码序列,本发明还提供了该蛋白和核酸序列的制备方法,以及在样品中检测人hALC核酸序列和多肽的方法。The invention provides a novel human hALC protein expressed in human liver and its coding sequence, the invention also provides a preparation method of the protein and nucleic acid sequence, and a method for detecting human hALC nucleic acid sequence and polypeptide in a sample.

Description

一种人肝癌相关抑癌蛋白及其编码序列A human liver cancer-related tumor suppressor protein and its coding sequence

本发明涉及分子生物学、肿瘤学、酶学、生理学以及基因工程等领域。具体地,本发明涉及一种在人类肝中表达的hALC蛋白及其核酸序列。本发明还涉及该蛋白和核酸序列的制备方法和用途。The invention relates to the fields of molecular biology, oncology, enzymology, physiology, genetic engineering and the like. Specifically, the present invention relates to a hALC protein expressed in human liver and its nucleic acid sequence. The present invention also relates to the preparation method and use of the protein and nucleic acid sequence.

人们在研究急性淋巴白血病(acute lymphocytic leukemias,ALL)的过程中发现,约20%的情形中这种病与一个融合蛋白E2a-Pbx1紧密相关。将这个融合蛋白转入家鼠的一个成纤维细胞株中表达,进一步研究发现E2a-Pbx1在其中作用于12个靶基因。这些靶基因被命名为EF-1到EF-12(E2a-Pbx1 target gene in fibroblasts1 to 12)。(Mol Cell Biol.1997 Mar;17(3):1503-12.)。During the study of acute lymphocytic leukemia (ALL), it was found that about 20% of the cases were closely related to a fusion protein E2a-Pbx1. This fusion protein was expressed in a fibroblast cell line of house mouse, and further research found that E2a-Pbx1 acted on 12 target genes in it. These target genes were named EF-1 to EF-12 (E2a-Pbx1 target gene in fibroblasts1 to 12). (Mol Cell Biol. 1997 Mar; 17(3):1503-12.).

本发明中,我们在人类肝中克隆到家鼠EF-9基因的同源基因。进一步研究后我们发现,这个新的人类基因不但与家鼠EF-9基因完全同源,而且与人类肝癌的发生有紧密的联系,故命名为hALC基因(human Antioncogene involved in LiverCancer)。In the present invention, we cloned the homologous gene of the musculus EF-9 gene in human liver. After further research, we found that this new human gene is not only completely homologous to the house mouse EF-9 gene, but also closely related to the occurrence of human liver cancer, so it was named hALC gene (human Anticogene involved in Liver Cancer).

在本发明被公布之前,尚未有任何公开或报道过本专利申请中提及的人类hALC蛋白序列及其核酸序列。Before the publication of the present invention, there has not been any disclosure or report of the human hALC protein sequence and its nucleic acid sequence mentioned in this patent application.

本发明的第一目的就是提供一种新的人基因hALC(Genbank AccessionNo.AY013707),该基因是一个人hALC蛋白基因。The first object of the present invention is to provide a new human gene hALC (Genbank Accession No. AY013707), which is a human hALC protein gene.

本发明的第二目的是提供一种新的人蛋白hALC。The second object of the present invention is to provide a new human protein hALC.

本发明的第三目的是提供一种利用重组技术生产上述的新的人hALC蛋白和核酸序列的方法。The third object of the present invention is to provide a method for producing the above-mentioned novel human hALC protein and nucleic acid sequence using recombinant technology.

本发明还提供了这种人hALC蛋白多肽和编码序列的应用。The present invention also provides the application of the human hALC protein polypeptide and coding sequence.

在本发明的一个方面,提供了一种分离出的DNA分子,该分子包括:编码具有人hALC蛋白质活性的多肽的核苷酸序列,所述的核苷酸序列与SEQ ID NO.6中从核苷酸第31-1671位DNA分子的核苷酸序列有至少70%的同源性;或者所述的核苷酸序列能在中度严紧条件下与SEQ ID NO.6中从核苷酸第31-1671位的核苷酸序列杂交。较佳地,所述的序列编码具有SEQ ID NO.7所示的氨基酸序列的多肽。更佳地,所述的序列具有SEQ ID NO.6中从核苷酸第31-1671位的核苷酸序列。In one aspect of the present invention, an isolated DNA molecule is provided, the molecule includes: a nucleotide sequence encoding a polypeptide having human hALC protein activity, and the nucleotide sequence is the same as that obtained from SEQ ID NO.6 The nucleotide sequence of the nucleotide 31-1671 DNA molecule has at least 70% homology; or the nucleotide sequence can be obtained from the nucleotide sequence of SEQ ID NO.6 under moderately stringent conditions The nucleotide sequence at position 31-1671 hybridizes. Preferably, the sequence encodes a polypeptide having the amino acid sequence shown in SEQ ID NO.7. More preferably, said sequence has the nucleotide sequence from nucleotide 31-1671 in SEQ ID NO.6.

在本发明的另一方面,提供了一种分离出的人hALC蛋白质多肽,它包括:具有SEQ ID NO.7氨基酸序列的多肽、或其保守性变异多肽、或其活性片段,或其活性衍生物。较佳地,该多肽是具有SEQ ID NO.7序列的多肽。In another aspect of the present invention, an isolated human hALC protein polypeptide is provided, which includes: a polypeptide having the amino acid sequence of SEQ ID NO.7, or a conservative variant polypeptide thereof, or an active fragment thereof, or an active derivative thereof things. Preferably, the polypeptide is a polypeptide having the sequence of SEQ ID NO.7.

在本发明的另一方面,还提供了一种载体,它包含上述的DNA分子。In another aspect of the present invention, a vector comprising the above-mentioned DNA molecule is also provided.

在本发明的另一方面,还提供了一种用上述载体转化的宿主细胞。在一个实例中该宿主细胞是大肠杆菌;在另一实例中,该宿主细胞是真核细胞。In another aspect of the present invention, a host cell transformed with the above vector is also provided. In one example the host cell is E. coli; in another example, the host cell is a eukaryotic cell.

在本发明的另一方面,还提供了一种产生具有人hALC蛋白质活性的多肽的方法,其步骤如下:In another aspect of the present invention, a method for producing a polypeptide having human hALC protein activity is also provided, the steps of which are as follows:

(1)将编码具有人hALC蛋白活性的多肽的核苷酸序列可操作地连于表达调控序列,形成人hALC蛋白表达载体,所述的核苷酸序列与SEQ ID NO.6中从核苷酸第31-1671位的核苷酸序列有至少70%的同源性;(1) The nucleotide sequence encoding the polypeptide having human hALC protein activity is operably connected to the expression control sequence to form a human hALC protein expression vector, and the nucleotide sequence and SEQ ID NO.6 are derived from nucleosides The nucleotide sequence at positions 31-1671 of acid has at least 70% homology;

(2)将步骤(1)中的表达载体转入宿主细胞,形成人hALC蛋白的重组细胞;(2) transferring the expression vector in step (1) into a host cell to form a recombinant cell of human hALC protein;

(3)在适合表达人hALC蛋白多肽的条件下,培养步骤(2)中的重组细胞;(3) cultivating the recombinant cells in step (2) under conditions suitable for expressing the human hALC protein polypeptide;

(4)分离出具有人hALC蛋白活性的多肽。(4) Isolating a polypeptide having human hALC protein activity.

较佳地,在该方法中使用的核酸序列具有SEQ ID NO.6中第31-1671位的序列。Preferably, the nucleic acid sequence used in the method has the sequence of positions 31-1671 in SEQ ID NO.6.

本发明还提供了与hALC蛋白多肽特异性结合的抗体。The invention also provides an antibody specifically binding to the hALC protein polypeptide.

在本发明中,“分离的”、“纯化的”或“基本纯的”DNA是指,该DNA或片段已从天然状态下位于其两侧的序列中分离出来,还指该DNA或片段已经与天然状态下伴随核酸的组份分开,而且已经与在细胞中伴随其的蛋白质分开。In the present invention, "isolated", "purified" or "substantially pure" DNA means that the DNA or fragment has been separated from the sequences flanking it in its natural state, and also means that the DNA or fragment has been Separated from the components that naturally accompany nucleic acids and that have been separated from the proteins that accompany them in cells.

在本发明中,术语“人hALC蛋白(或多肽)编码序列”指编码具有人hALC蛋白活性的多肽的核苷酸序列,如SEQ ID NO.6中第31-1671位核苷酸序列及其简并序列。该简并序列是指,位于SEQ ID NO.6序列的编码框第31-1671位核苷酸中,有一个或多个密码子被编码相同氨基酸的简并密码子所取代后而产生的序列。由于密码子的简并性,所以与SEQ ID NO.6中第31-1671位核苷酸序列同源性低至约70%的简并序列也能编码出SEQ ID NO.7所述的序列。该术语还包括能在中度严紧条件下,更佳的在高度严紧条件下与SEQ ID NO.6中从核苷酸第31-1671位的核苷酸序列杂交的核苷酸序列。该术语还包括与SEQ ID NO.6中从核苷酸第31-1671位的核苷酸序列的同源性至少70%,较佳地至少80%,更佳地至少90%,最佳地至少95%的核苷酸序列。In the present invention, the term "human hALC protein (or polypeptide) coding sequence" refers to a nucleotide sequence encoding a polypeptide having human hALC protein activity, such as the 31-1671 nucleotide sequence in SEQ ID NO.6 and its degenerate sequence. The degenerate sequence refers to the sequence generated after one or more codons are replaced by degenerate codons encoding the same amino acid in the 31-1671 nucleotides of the coding frame of the sequence of SEQ ID NO.6 . Due to the degeneracy of codons, a degenerate sequence with a homology as low as about 70% of the 31-1671 nucleotide sequence in SEQ ID NO.6 can also encode the sequence described in SEQ ID NO.7 . The term also includes a nucleotide sequence capable of hybridizing to the nucleotide sequence from nucleotides 31 to 1671 in SEQ ID NO.6 under moderately stringent conditions, preferably under highly stringent conditions. The term also includes at least 70%, preferably at least 80%, more preferably at least 90%, and most preferably at least 70% homology with the nucleotide sequence from nucleotide 31-1671 in SEQ ID NO.6 At least 95% nucleotide sequence.

该术语还包括能编码具有与天然的人hALC相同功能的蛋白的、SEQ ID NO.6中开放阅读框序列的变异形式。这些变异形式包括(但并不限于):若干个(通常为1-90个,较佳地1-60个,更佳地1-20个,最佳地1-10个)核苷酸的缺失、插入和/或取代,以及在5’和/或3’端添加数个(通常为60个以内,较佳地为30个以内,更佳地为10个以内,最佳地为5个以内)核苷酸。The term also includes variants of the open reading frame sequence of SEQ ID NO. 6 that encode a protein that has the same function as native human hALC. These variations include (but are not limited to): the deletion of several (usually 1-90, preferably 1-60, more preferably 1-20, and most preferably 1-10) nucleotides , insertion and/or substitution, and addition of several (usually within 60, preferably within 30, more preferably within 10, and most preferably within 5) at the 5' and/or 3' end ) nucleotides.

在本发明中,“基本纯的”蛋白质或多肽是指其至少占样品总物质的至少20%,较佳地至少50%,更佳地至少80%,最佳地至少90%(按干重或湿重计)。纯度可以用任何合适的方法进行测量,如用柱层析、PAGE或HPLC法测量多肽的纯度。基本纯的多肽基本上不含天然状态下的伴随其的组分。In the present invention, "substantially pure" protein or polypeptide means that it accounts for at least 20%, preferably at least 50%, more preferably at least 80%, and most preferably at least 90% (by dry weight) of the total substance of the sample. or wet weight). Purity can be measured by any suitable method, such as measuring the purity of the polypeptide by column chromatography, PAGE or HPLC. A substantially pure polypeptide is substantially free of components that accompany it in its native state.

在本发明中,术语“人hALC蛋白或多肽”指具有人hALC蛋白活性的SEQ ID NO.7序列的多肽。该术语还包括具有与天然人hALC相同功能的、SEQ ID NO.7序列的变异形式。这些变异形式包括(但并不限于):若干个(通常为1-50个,较佳地1-30个,更佳地1-20个,最佳地1-10个)氨基酸的缺失、插入和/或取代,以及在C末端和/或N末端添加一个或数个(通常为20个以内,较佳地为10个以内,更佳地为5个以内)氨基酸。例如,在本领域中,用性能相近或相似的氨基酸进行取代时,通常不会改变蛋白质的功能。又比如,在C末端和/或N末端添加一个或数个氨基酸通常也不会改变蛋白质的功能。该术语还包括人hALC蛋白的活性片段和活性衍生物。In the present invention, the term "human hALC protein or polypeptide" refers to a polypeptide having the sequence of SEQ ID NO.7 having human hALC protein activity. The term also includes variant forms of the sequence of SEQ ID NO. 7 that have the same function as native human hALC. These variations include (but are not limited to): deletions and insertions of several (usually 1-50, preferably 1-30, more preferably 1-20, and most preferably 1-10) amino acids and/or substitution, and addition of one or several (usually within 20, preferably within 10, more preferably within 5) amino acids at the C-terminal and/or N-terminal. For example, in the art, substitutions with amino acids with similar or similar properties generally do not change the function of the protein. As another example, adding one or several amino acids at the C-terminus and/or N-terminus usually does not change the function of the protein. The term also includes active fragments and active derivatives of human hALC protein.

本发明的人hALC多肽的变异形式包括:同源序列、保守性变异体、等位变异体、天然突变体、诱导突变体、在高或低的严紧条件下能与人hALC DNA杂交的DNA所编码的蛋白、以及利用抗人hALC多肽的抗血清获得的多肽或蛋白。本发明还提供了其他多肽,如包含人hALC多肽或其片段的融合蛋白。除了几乎全长的多肽外,本发明还包括人hALC多肽的可溶性片段。通常,该片段具有人hALC多肽序列的至少约10个连续氨基酸,通常至少约30个连续氨基酸,较佳地至少约50个连续氨基酸,更佳地至少约80个连续氨基酸,最佳地至少约100个连续氨基酸。Variant forms of the human hALC polypeptide of the present invention include: homologous sequences, conservative variants, allelic variants, natural mutants, induced mutants, and DNA that can hybridize with human hALC DNA under high or low stringency conditions The encoded protein, and the polypeptide or protein obtained by using the antiserum against human hALC polypeptide. The present invention also provides other polypeptides, such as fusion proteins comprising human hALC polypeptides or fragments thereof. In addition to nearly full-length polypeptides, the present invention also includes soluble fragments of human hALC polypeptides. Typically, the fragment has at least about 10 contiguous amino acids, usually at least about 30 contiguous amino acids, preferably at least about 50 contiguous amino acids, more preferably at least about 80 contiguous amino acids, and most preferably at least about 80 contiguous amino acids of the human hALC polypeptide sequence. 100 consecutive amino acids.

在本发明中,“人hALC保守性变异多肽”指与SEQ ID NO.7的氨基酸序列相比,有至多10个,较佳地至多8个,更佳地至多5个氨基酸被性质相似或相近的氨基酸所替换而形成多肽。这些保守性变异多肽最好根据表1进行替换而产生。In the present invention, "human hALC conservative variant polypeptide" means that compared with the amino acid sequence of SEQ ID NO.7, at most 10, preferably at most 8, more preferably at most 5 amino acids are similar or similar in nature Amino acids are substituted to form polypeptides. These conservative variant polypeptides are preferably produced by substitutions according to Table 1.

                                      表1 最初的残基 代表性的取代 优选的取代 Ala(A) Val;Leu;Ile Val Arg(R) Lys;Gln;Asn Lys Asn(N) Gln;His;Lys;Arg Gln Asp(D) Glu Glu Cys(C) Ser Ser Gln(Q) Asn Asn Glu(E) Asp Asp Gly(G) Pro;Ala Ala His(H) Asn;Gln;Lys;Arg Arg Ile(I) Leu;Val;Met;Ala;Phe Leu Leu(L) Ile;Val;Met;Ala;Phe Ile Lys(K) Arg;Gln;Asn Arg Met(M) Leu;Phe;Ile Leu Phe(F) Leu;Val;Ile;Ala;Tyr Leu Pro(P) Ala Ala Ser(S) Thr Thr Thr(T) Ser Ser Trp(W) Tyr;Phe Tyr Tyr(Y) Trp;Phe;Thr;Ser Phe Val(V) Ile;Leu;Met;Phe;Ala Leu Table 1 initial residue representative replacement preferred substitution Ala(A) Val; Leu; Ile Val Arg(R) Lys; Gln; Asn Lys Asn(N) Gln; His; Lys; Arg Gln Asp(D) Glu Glu Cys(C) Ser Ser Gln(Q) Asn Asn Glu(E) Asp Asp Gly(G) Pro; Ala His(H) Asn; Gln; Lys; Arg Arg Ile (I) Leu; Val; Met; Ala; Phe Leu Leu(L) Ile; Val; Met; Ala; Phe Ile Lys(K) Arg; Gln; Asn Arg Met(M) Leu; Phe; Ile Leu Phe(F) Leu; Val; Ile; Ala; Tyr Leu Pro(P) Ala Ala Ser(S) Thr Thr Thr(T) Ser Ser Trp(W) Tyr; Phe Tyr Tyr(Y) Trp; Phe; Thr; Ser Phe Val(V) Ile; Leu; Met; Phe; Leu

发明还包括人hALC蛋白或多肽的类似物。这些类似物与天然人hALC多肽的差别可以是氨基酸序列上的差异,也可以是不影响序列的修饰形式上的差异,或者兼而有之。这些多肽包括天然或诱导的遗传变异体。诱导变异体可以通过各种技术得到,如通过辐射或暴露于诱变剂而产生随机诱变,还可通过定点诱变法或其他已知分子生物学的技术。类似物还包括具有不同于天然L-氨基酸的残基(如D-氨基酸)的类似物,以及具有非天然存在的或合成的氨基酸(如β、γ-氨基酸)的类似物。应理解,本发明的多肽并不限于上述例举的代表性的多肽。The invention also includes analogs of human hALC proteins or polypeptides. The difference between these analogs and the natural human hALC polypeptide may be the difference in the amino acid sequence, or the difference in the modified form that does not affect the sequence, or both. These polypeptides include natural or induced genetic variants. Induced variants can be obtained by various techniques, such as random mutagenesis by radiation or exposure to mutagens, but also by site-directed mutagenesis or other techniques known in molecular biology. Analogs also include analogs with residues other than natural L-amino acids (eg, D-amino acids), and analogs with non-naturally occurring or synthetic amino acids (eg, β, γ-amino acids). It should be understood that the polypeptides of the present invention are not limited to the representative polypeptides exemplified above.

修饰(通常不改变一级结构)形式包括:体内或体外的多肽的化学衍生形式如乙酰化或羧基化。修饰还包括糖基化,如那些在多肽的合成和加工中或进一步加工步骤中进行糖基化修饰而产生的多肽。这种修饰可以通过将多肽暴露于进行糖基化的酶(如哺乳动物的糖基化酶或去糖基化酶)而完成。修饰形式还包括具有磷酸化氨基酸残基(如磷酸酪氨酸,磷酸丝氨酸,磷酸苏氨酸)的序列。还包括被修饰从而提高了其抗蛋白水解性能或优化了溶解性能的多肽。Modified (usually without altering primary structure) forms include: chemically derivatized forms of polypeptides such as acetylation or carboxylation, in vivo or in vitro. Modifications also include glycosylation, such as those resulting from polypeptides that are modified by glycosylation during synthesis and processing of the polypeptide or during further processing steps. Such modification can be accomplished by exposing the polypeptide to an enzyme that performs glycosylation, such as a mammalian glycosylase or deglycosylation enzyme. Modified forms also include sequences with phosphorylated amino acid residues (eg, phosphotyrosine, phosphoserine, phosphothreonine). Also included are polypeptides that have been modified to increase their resistance to proteolysis or to optimize solubility.

在本发明中,可选用本领域已知的各种载体,如市售的载体,包括质粒,粘粒等。在生产本发明的人hALC多肽时,可以将人hALC编码序列可操作地连于表达调控序列,从而形成人hALC蛋白表达载体。In the present invention, various vectors known in the art can be used, such as commercially available vectors, including plasmids, cosmids and the like. When producing the human hALC polypeptide of the present invention, the human hALC coding sequence can be operably linked to the expression control sequence, thereby forming a human hALC protein expression vector.

如本文所用,“可操作地连于”指这样一种状况,即线性DNA序列的某些部分能够影响同一线性DNA序列其他部分的活性。例如,如果信号肽DNA作为前体表达并参与多肽的分泌,那么信号肽(分泌前导序列)DNA就是可操作地连于多肽DNA;如果启动子控制序列的转录,那么它是可操作地连于编码序列;如果核糖体结合位点被置于能使其翻译的位置时,那么它是可操作地连于编码序列。一般,“可操作地连于”意味着相邻,而对于分泌前导序列则意味着在阅读框中相邻。As used herein, "operably linked" refers to the condition that some portion of a linear DNA sequence is capable of affecting the activity of other portions of the same linear DNA sequence. For example, a signal peptide (secretion leader) DNA is operably linked to a polypeptide DNA if the signal peptide DNA is expressed as a precursor and is involved in the secretion of the polypeptide; if a promoter controls the transcription of the sequence, it is operably linked to A coding sequence; a ribosome binding site is operably linked to a coding sequence if it is placed in a position to enable its translation. Generally, "operably linked to" means adjacent, and with respect to a secretory leader it means adjacent in reading frame.

在本发明中,术语“宿主细胞”包括原核细胞和真核细胞。常用的原核宿主细胞的例子包括大肠杆菌、枯草杆菌等。常用的真核宿主细胞包括酵母细胞、昆虫细胞和哺乳动物细胞。较佳地,该宿主细胞是真核细胞,如CHO细胞、COS细胞等。In the present invention, the term "host cell" includes prokaryotic cells and eukaryotic cells. Examples of commonly used prokaryotic host cells include Escherichia coli, Bacillus subtilis, and the like. Commonly used eukaryotic host cells include yeast cells, insect cells, and mammalian cells. Preferably, the host cells are eukaryotic cells, such as CHO cells, COS cells and the like.

本发明还提供了对人hALC特异性结合的抗体,包括多克隆抗体和单克隆抗体。The invention also provides antibodies specifically binding to human hALC, including polyclonal antibodies and monoclonal antibodies.

在本发明中,可以使用一系列本领域已知的方法来制备针对人hALC特异的抗体。例如,将提纯的人hALC基因产物或它的抗原片段注射入动物体内以产生多克隆抗体。同样,表达人hALC或它的抗原片段的细胞也可以用来对动物致免疫而产生抗体。根据本发明制备的抗体也可以是单克隆抗体,这些单克隆抗体可以用杂交瘤技术制备(例如,Kohler et al.,Nature 256:495,1975;Kohler et al.,Eur.J.Immunol.6:511,1976;Kohler et al.,Eur.J.Immunol.6:292,1976)。本发明的抗体包括可以阻抑人hALC功能的抗体,也可以是不影响人hALC功能的抗体。每一类抗体都可以通过对人hALC基因产物的片段或功能域致免疫而产生,而人hALC基因产物及其片段可以用重组方法产生或用多肽合成仪进行合成。与非修饰形式的人hALC基因产物结合的抗体,可以通过用在原核细胞例如E.coli中产生的基因产物来免疫动物而得到。与翻译后修饰形式如糖基化或磷酸化蛋白或多肽结合的抗体,可以通过用在真核细胞如酵母或昆虫细胞中产生的基因产物的来免疫动物而得到。In the present invention, a series of methods known in the art can be used to prepare antibodies specific for human hALC. For example, purified human hALC gene product or its antigenic fragments are injected into animals to produce polyclonal antibodies. Likewise, cells expressing human hALC or antigenic fragments thereof can also be used to immunize animals to produce antibodies. Antibodies produced according to the present invention may also be monoclonal antibodies, which can be produced using hybridoma technology (e.g., Kohler et al., Nature 256:495, 1975; Kohler et al., Eur. J. Immunol. 6 :511, 1976; Kohler et al., Eur. J. Immunol. 6: 292, 1976). The antibodies of the present invention include antibodies that can suppress the function of human hALC, and can also be antibodies that do not affect the function of human hALC. Each type of antibody can be produced by immunizing fragments or functional domains of human hALC gene products, and human hALC gene products and fragments thereof can be produced by recombinant methods or synthesized with a polypeptide synthesizer. Antibodies that bind unmodified forms of human hALC gene products can be obtained by immunizing animals with gene products produced in prokaryotic cells such as E. coli. Antibodies that bind to post-translationally modified forms, such as glycosylated or phosphorylated proteins or polypeptides, can be obtained by immunizing animals with gene products produced in eukaryotic cells, such as yeast or insect cells.

本发明的人hALC抗体可以用来鉴定表达人hALC蛋白或多肽的细胞,如Jurkat T细胞。例如,可以用一种可检测的分子例如荧光素异硫氰酸(FITC)来标记人hALC特异抗体,然后让人hALC特异抗体与细胞样品接触,再用荧光显微镜或流式细胞仪检测出与人hALC特异抗体结合的细胞。The human hALC antibody of the present invention can be used to identify cells expressing human hALC protein or polypeptide, such as Jurkat T cells. For example, a human hALC-specific antibody can be labeled with a detectable molecule such as fluorescein isothiocyanate (FITC), and the human hALC-specific antibody can be exposed to a cell sample and detected by fluorescence microscopy or flow cytometry. Cells bound by human hALC-specific antibodies.

除了在细胞表面检测人hALC外,还可以用Western印迹技术分析该蛋白质。细胞裂解液可以从培养细胞或取自病人的组织标本如肝中提取,并溶解在含有去污剂的裂解缓冲液中。然后用SDS聚丙烯酰胺凝胶电泳分离细胞提取物(同时将提纯的人hALC多肽作为阳性对照),接着通过电泳杂交将其转移到硝酸纤维素上。为了用Western印迹免疫探测人hALC多肽,可以使用典型的抗体结合检测方法,例如放射自显影或碱性磷酸酶检测方法。并可使用免疫接种血清或不相关的单克隆抗体作为非特异反应的对照。In addition to detecting human hALC on the cell surface, the protein can also be analyzed by Western blotting. Cell lysates can be extracted from cultured cells or tissue samples taken from patients such as liver and dissolved in a lysis buffer containing detergent. Cell extracts were then separated by SDS polyacrylamide gel electrophoresis (with purified human hALC polypeptide as a positive control) and transferred to nitrocellulose by electrophoretic hybridization. For immunodetection of human hALC polypeptides by Western blot, typical antibody binding detection methods such as autoradiography or alkaline phosphatase detection methods can be used. Inoculation serum or irrelevant monoclonal antibodies can be used as controls for non-specific reactions.

还可用Nothern印迹法技术分析人hALC基因产物的表达,即分析人hALC的RNA转录物在细胞中的存在与否和数量。The expression of human hALC gene products can also be analyzed by Northern blot technique, that is, the presence and quantity of RNA transcripts of human hALC in the cells can be analyzed.

人hALC DNA的Nothern印迹分析和人hALC特异抗体的Western印迹分析可以联合使用,以证实人hALC在生物样本中的表达。人hALC DNA还可以用于Southern印迹分析或原位杂交分析,以将该基因定位于染色体上,并可进行遗传连锁分析以找出其它可能的疾病相关基因。Northern blot analysis of human hALC DNA and Western blot analysis of human hALC-specific antibodies can be used in combination to confirm the expression of human hALC in biological samples. Human hALC DNA can also be used for Southern blot analysis or in situ hybridization analysis to locate the gene on the chromosome, and genetic linkage analysis can be performed to find out other possible disease-related genes.

此外,本发明还提供了一种可用作探针的核酸分子,该分子通常具有人hALC核苷酸编码序列的8-100个连续核苷酸,较佳地具有15-50个连续核苷酸。该探针可用于检测样品中是否存在编码人hALC的核酸分子。In addition, the present invention also provides a nucleic acid molecule that can be used as a probe, which generally has 8-100 consecutive nucleotides of the human hALC nucleotide coding sequence, preferably 15-50 consecutive nucleotides acid. The probe can be used to detect whether there is a nucleic acid molecule encoding human hALC in a sample.

本发明还提供了检测样品中是否存在人hALC核苷酸序列的方法,它包括用上述的探针与样品进行杂交,然后检测探针是否发生了结合。较佳地,该样品是PCR扩增后的产物,其中PCR扩增引物对应于人hALC核苷酸编码序列,并可位于该编码序列的两侧或中间。引物长度一般为15-50个核苷酸。The present invention also provides a method for detecting whether there is human hALC nucleotide sequence in a sample, which comprises using the above-mentioned probe to hybridize with the sample, and then detecting whether the probe is combined. Preferably, the sample is a product of PCR amplification, wherein the PCR amplification primers correspond to the human hALC nucleotide coding sequence and can be located on both sides or in the middle of the coding sequence. Primers are generally 15-50 nucleotides in length.

此外,根据本发明的人hALC核苷酸序列和氨基酸序列,可以在核酸同源性或表达蛋白质的同源性基础上,筛选人hALC同源基因或同源蛋白。In addition, according to the human hALC nucleotide sequence and amino acid sequence of the present invention, human hALC homologous genes or homologous proteins can be screened on the basis of nucleic acid homology or expressed protein homology.

为了得到与人hALC基因相关的人cDNAs或基因组DNAs的点阵,可以用DNA探针筛选人cDNA或基因组DNA文库,这些探针是在低严紧条件下,用32P对人hALC的全部或部分做放射活性标记而得的。最适合于筛选的cDNA文库是来自人肝的文库。来自参与内分泌的其它人体组织或特定人体细胞株的cDNA文库也可用于筛选目的。构建来自感兴趣的细胞或者组织的cDNA文库的方法是分子生物学领域众所周知的。另外,许多这样的cDNA文库也可以购买到,例如购自Clontech,Palo Alto,Cal.。这种筛选方法可以识别与人hALC相关的基因家族的核苷酸序列。In order to obtain the dot array of human cDNAs or genomic DNAs related to human hALC genes, human cDNA or genomic DNA libraries can be screened with DNA probes, which are all or part of human hALC with 32 P under low stringency conditions obtained by radioactive labeling. The most suitable cDNA library for screening is that from human liver. cDNA libraries from other human tissues involved in endocrine or specific human cell lines may also be used for screening purposes. Methods for constructing cDNA libraries from cells or tissues of interest are well known in the art of molecular biology. In addition, many such cDNA libraries are commercially available, for example, from Clontech, Palo Alto, Cal. This screening method can identify the nucleotide sequences of gene families related to human hALC.

根据核苷酸相似性筛选人hALC同源物可以按如下方法完成。人体肝cDNA文库,例如Clontech Cat.#74XX(Clontech,Palo Alto,Cal.)可以使用一段包含人hALC基因序列的全部或部分的随机引物化DNA探针筛选。要完成对与人hALC序列至少有70%同源性的DNA插入序列的克隆的鉴定,可以使用杂交温度为55℃的杂交液,然后用0.5×SSC和0.1%SDS清洗。用这种方法识别的克隆的DNA插入序列可以进一步用DNA限制性内切酶分析和DNA测序来评价它与人hALC基因的相似性。组织表达的分布可以用上述的Northern印迹法技术分析。Screening of human hALC homologues based on nucleotide similarity can be accomplished as follows. Human liver cDNA libraries such as Clontech Cat.#74XX (Clontech, Palo Alto, Cal.) can be screened using a randomly primed DNA probe containing all or part of the human hALC gene sequence. To complete the identification of clones with DNA insertion sequences at least 70% homologous to human hALC sequences, use a hybridization solution at a hybridization temperature of 55°C, followed by washing with 0.5×SSC and 0.1% SDS. The cloned DNA insert sequence identified in this way can be further assessed for similarity to the human hALC gene by DNA restriction enzyme analysis and DNA sequencing. The distribution of tissue expression can be analyzed using the Northern blotting technique described above.

人hALC同源物也可以用针对人hALC蛋白或多肽的抗体来识别。例如,可以用标准的方法对商品化的或者用已知方法构建的,来自细胞或者组织例如肝的表达文库进行筛选。将文库倒入平皿,菌落转移到一张硝化纤维素膜上,使表达的重组蛋白结合到膜上。然后就可以用特异性的人hALC抗体进行典型的抗体结合和检测。用这种方法所识别出克隆中的DNA插入序列,可以进一步用DNA限制性内切酶分析和DNA测序进行分析以评价它与人hALC基因的相似性。新识别的基因的组织表达分布可以同样地按上述方法进行分析。Human hALC homologues can also be identified with antibodies against human hALC proteins or polypeptides. For example, commercially available or constructed expression libraries derived from cells or tissues such as liver can be screened by standard methods. The library is poured into a plate, and the colony is transferred to a nitrocellulose membrane, allowing the expressed recombinant protein to bind to the membrane. Typical antibody binding and detection can then be performed with specific human hALC antibodies. The DNA insert in the clone identified by this method can be further analyzed by DNA restriction enzyme analysis and DNA sequencing to evaluate its similarity to the human hALC gene. Tissue expression profiles of newly identified genes can be analyzed similarly as described above.

本发明的人hALC核苷酸全长序列或其片段通常可以用PCR扩增法、重组法或人工合成的方法获得。对于PCR扩增法,可根据本发明所公开的有关核苷酸序列,尤其是开放阅读框序列来设计引物,并用市售的cDNA库或按本领域技术人员已知的常规方法所制备的cDNA库作为模板,扩增而得有关序列。当序列较长时,常常需要进行两次或多次PCR扩增,然后再将各次扩增出的片段按正确次序拼接在一起。The full-length human hALC nucleotide sequence or its fragments of the present invention can usually be obtained by PCR amplification, recombination or artificial synthesis. For the PCR amplification method, primers can be designed according to the relevant nucleotide sequences disclosed in the present invention, especially the open reading frame sequence, and the cDNA prepared by a commercially available cDNA library or a conventional method known to those skilled in the art can be used. The library is used as a template to amplify related sequences. When the sequence is long, it is often necessary to carry out two or more PCR amplifications, and then splice together the amplified fragments in the correct order.

一旦获得了有关的序列,就可以用重组法来大批量地获得有关序列。这通常是将其克隆入载体,再转入细胞,然后通过常规方法从增殖后的宿主细胞中分离得到有关序列。Once the relevant sequences are obtained, recombinant methods can be used to obtain the relevant sequences in large quantities. Usually, it is cloned into a vector, then transformed into a cell, and then the relevant sequence is isolated from the proliferated host cell by conventional methods.

此外,还可用人工化学合成的方法来合成有关序列。在本申请之前,现有技术已完全可以通过先合成多个多核苷酸小片段,然后再进行连接而获得编码本发明人hALC蛋白的核酸序列。然后,可将该核酸序列引入本领域中各种现有的DNA分子(如载体)和细胞中。此外,还可通过化学合成将突变引入本发明蛋白序列中。In addition, related sequences can also be synthesized by artificial chemical synthesis. Before this application, in the prior art, it was completely possible to obtain the nucleic acid sequence encoding the human hALC protein of the present invention by first synthesizing multiple small polynucleotide fragments and then connecting them. Then, the nucleic acid sequence can be introduced into various existing DNA molecules (such as vectors) and cells in the art. In addition, mutations can also be introduced into the protein sequences of the invention by chemical synthesis.

除了用重组法产生之外,本发明蛋白的片段还可用固相技术,通过直接合成肽而加以生产(Stewart等人,(1969)Solid-Phase Peptide Synthesis,WH FreemanCo.,San Francisco;Merrifield J.(1963)J.Am Chem.Soc 85:2149-2154)。在体外合成蛋白质可以用手工或自动进行。例如,可以用Applied Biosystems的431A型肽合成仪(Foster City,CA)来自动合成肽。可以分别化学合成本发明蛋白的各片段,然后用化学方法加以连接以产生全长的分子。In addition to recombinant production, fragments of the proteins of the invention can also be produced by direct peptide synthesis using solid-phase techniques (Stewart et al., (1969) Solid-Phase Peptide Synthesis, WH Freeman Co., San Francisco; Merrifield J. (1963) J. Am Chem. Soc 85:2149-2154). Protein synthesis in vitro can be performed manually or automatically. For example, peptides can be synthesized automatically using an Applied Biosystems Model 431A Peptide Synthesizer (Foster City, CA). Fragments of a protein of the invention can be chemically synthesized separately and then chemically linked to produce a full-length molecule.

本发明蛋白的编码序列可用于基因定位。例如,通过荧光原位杂交技术(FISH),将cDNA克隆与分裂中期的染色体进行杂交,可以准确地进行染色体定位。该技术可以使用短至约500bp的cDNA;也可以使用长至约2000bp或者更长的cDNA。对于该技术,可参见Verma等人,Human Chromosomes:A Manual of Basic Techniques,Pergamon Press,New York(1988)。The coding sequence of the protein of the present invention can be used for gene mapping. For example, by fluorescent in situ hybridization (FISH), cDNA clones can be hybridized with metaphase chromosomes to accurately locate chromosomes. The technique can use cDNAs as short as about 500 bp; cDNAs as long as about 2000 bp or longer can also be used. For this technique, see Verma et al., Human Chromosomes: A Manual of Basic Techniques, Pergamon Press, New York (1988).

一旦序列被定位于染色体上的某个精确位置,将可以将序列在染色体上的物理位置与遗传图谱数据相关联。这些遗传图谱数据是可以获得的,例如通过孟德尔(Mendelian)人遗传数据库(可通过Johns Hopkins University Welch Medical Library在网上获得)。然后,通过连锁分析来鉴定基因与已定位于同一染色体区域的疾病之间的相关性。Once a sequence has been mapped to a precise location on a chromosome, it will be possible to correlate the sequence's physical location on the chromosome with genetic map data. Such genetic map data are available, for example, through the Mendelian Human Genetics Database (available online through the Johns Hopkins University Welch Medical Library). Linkage analysis is then used to identify associations between genes and diseases that have been mapped to the same chromosomal region.

接着,有必要确定患病个体和健康个体之间的cDNA或基因组序列方面的差异。如果某一突变存在于部分或全部患病个体但不存在于正常个体,那么该突变可能就是该疾病的致病因素。Next, it is necessary to determine the differences in cDNA or genome sequence between diseased and healthy individuals. If a mutation is present in some or all affected individuals but not in normal individuals, the mutation may be the cause of the disease.

利用本发明的人hALC蛋白,通过各种常规筛选方法,可筛选出与人hALC发生相互作用的物质,或者受体、抑制剂或拮抗剂等。Utilizing the human hALC protein of the present invention, through various conventional screening methods, substances interacting with human hALC, or receptors, inhibitors or antagonists can be screened out.

本发明人hALC蛋白及其抗体、抑制剂、拮抗剂或受体等,当在治疗上进行施用(给药)时,可提供不同的效果。通常,可将这些物质配制于无毒的、惰性的和药学上可接受的水性载体介质中,其中pH通常为约5-8,较佳地pH约为6-8,尽管pH值可随被配制物质的性质以及待治疗的病症而有所变化。配制好的药物组合物可以通过常规途径进行给药,其中包括(但并不限于):肌内、腹膜内、皮下、皮内、或局部给药。When the human hALC protein of the present invention and its antibody, inhibitor, antagonist, or receptor are administered (administered) therapeutically, various effects can be provided. Generally, these materials can be formulated in a non-toxic, inert and pharmaceutically acceptable aqueous carrier medium, wherein the pH is usually about 5-8, preferably about 6-8, although the pH value can be changed according to the Depending on the nature of the substance formulated and the condition to be treated. The formulated pharmaceutical composition can be administered by conventional routes, including (but not limited to): intramuscular, intraperitoneal, subcutaneous, intradermal, or topical administration.

以本发明的人hALC蛋白为例,可以将其与合适的药学上可接受的载体联用。这类药物组合物含有治疗有效量的蛋白质和药学上可接受的载体或赋形剂。这类载体包括(但并不限于):盐水、缓冲液、葡萄糖、水、甘油、乙醇、及其组合。药物制剂应与给药方式相匹配。本发明的人hALC蛋白可以被制成针剂形式,例如用生理盐水或含有葡萄糖和其他辅剂的水溶液通过常规方法进行制备。诸如片剂和胶囊之类的药物组合物,可通过常规方法进行制备。药物组合物如针剂、溶液、片剂和胶囊宜在无菌条件下制造。活性成分的给药量是治疗有效量,例如每天约1微克/千克体重-约5毫克/千克体重。此外,本发明的多肽还可与其他治疗剂一起使用。Taking the human hALC protein of the present invention as an example, it can be used in combination with a suitable pharmaceutically acceptable carrier. Such pharmaceutical compositions contain a therapeutically effective amount of protein and a pharmaceutically acceptable carrier or excipient. Such carriers include, but are not limited to: saline, buffer, dextrose, water, glycerol, ethanol, and combinations thereof. The pharmaceutical formulation should match the mode of administration. The human hALC protein of the present invention can be prepared in the form of injection, for example, by conventional methods using physiological saline or aqueous solution containing glucose and other adjuvants. Pharmaceutical compositions such as tablets and capsules can be prepared by conventional methods. Pharmaceutical compositions such as injections, solutions, tablets and capsules are preferably manufactured under sterile conditions. The active ingredient is administered in a therapeutically effective amount, for example about 1 microgram/kg body weight to about 5 mg/kg body weight per day. In addition, the polypeptides of the invention can also be used with other therapeutic agents.

当本发明的人hALC蛋白多肽被用作药物时,可将治疗有效剂量的该多肽施用于哺乳动物,其中该治疗有效剂量通常至少约10微克/千克体重,而且在大多数情况下不超过约8毫克/千克体重,较佳地该剂量是约10微克/千克体重-约1毫克/千克体重。当然,具体剂量还应考虑给药途径、病人健康状况等因素,这些都是熟练医师技能范围之内的。When the human hALC protein polypeptide of the present invention is used as a drug, a therapeutically effective dose of the polypeptide can be administered to mammals, wherein the therapeutically effective dose is usually at least about 10 micrograms per kilogram of body weight, and in most cases no more than about 8 mg/kg body weight, preferably the dosage is about 10 microgram/kg body weight to about 1 mg/kg body weight. Of course, factors such as the route of administration and the health status of the patient should also be considered for the specific dosage, which are within the skill of skilled physicians.

表2为本发明的人hALC蛋白与家鼠EF-9蛋白的核苷酸序列(GenBank AccessionNo.U72678)的同源比较(FASTA)表。Table 2 is the homology comparison (FASTA) table of the nucleotide sequences (GenBank Accession No. U72678) of the human hALC protein of the present invention and the EF-9 protein of the house mouse.

表3为本发明的人hALC蛋白与家鼠EF-9蛋白的氨基酸序列(GenPept AccessionNo.AAB51038)的同源比较(FASTA)表。其中,相同的氨基酸在两个序列之间用氨基酸单字符标出,相似的氨基酸用“+”标出。Table 3 is the homology comparison (FASTA) table of the amino acid sequence (GenPept Accession No. AAB51038) of the human hALC protein of the present invention and the musculus EF-9 protein. Among them, the same amino acid is marked with a single amino acid character between the two sequences, and the similar amino acid is marked with "+".

下面结合具体实施例,进一步阐述本发明。应理解,这些实施例仅用于说明本发明而不用于限制本发明的范围。下列实施例中未注明具体条件的实验方法,通常按照常规条件,例如Sambrook等人,分子克隆:实验室手册(NewYork:Cold SpringHarbor Laboratory Press,1989)中所述的条件,或按照制造厂商所建议的条件。Below in conjunction with specific embodiment, further illustrate the present invention. It should be understood that these examples are only used to illustrate the present invention and are not intended to limit the scope of the present invention. The experimental method that does not indicate specific conditions in the following examples is usually according to conventional conditions, such as Sambrook et al., molecular cloning: the conditions described in the laboratory manual (NewYork: Cold Spring Harbor Laboratory Press, 1989), or according to the manufacturer's instructions suggested conditions.

实施例1Example 1

人hALC基因的克隆Cloning of human hALC gene

1.组织分离(肝isolation)1. Tissue isolation (liver isolation)

肝来源于5个正常成年男性供体,在死后四小时内取出肝,立即置于液氮中冷冻保存。The livers were obtained from 5 normal adult male donors. The livers were removed within four hours after death and immediately placed in liquid nitrogen for cryopreservation.

2.mRNA的分离(mRNA isolation)2. mRNA isolation

取出组织,用研钵研碎,加入盛有裂解液的50ml管,充分振荡后,再移入玻璃匀浆器内。匀浆后移至50ml新管,抽提总RNA(TRIzol Reagents,Gibco,NY,USA)。用甲醛变性胶电泳鉴定总RNA质量。用带Oligo d(T)的纤维素柱分离总RNA中的mRNA,定量。Take out the tissue, grind it with a mortar, add it into a 50ml tube filled with lysate, shake it fully, and then transfer it into a glass homogenizer. After homogenization, transfer to a new 50ml tube and extract total RNA (TRIzol Reagents, Gibco, NY, USA). The quality of total RNA was identified by formaldehyde denaturing gel electrophoresis. The mRNA in the total RNA was separated and quantified using a cellulose column with Oligo d(T).

3.cDNA文库的构建(Construction of cDNA library)3. Construction of cDNA library

以mRNA为模板,合成双链cDNA,反转录引物见SEQ ID NO.1。补平末端后,加含EcoRⅠ切点的接头,接头序列分别见SEQ ID NO.2和3。磷酸化EcoRⅠ末端后,用XhoⅠ限制性内切酶消化1.5小时,再进行片段分离。过柱筛选长度>500bp的片段,用酚-氯仿抽提,乙醇沉淀,无菌水溶解,连接至Uni-ZAP XR载体(Stratagene,CA9203,USA),以Zap-cDNA Gigapack Ⅲ Gold Cloning Kit(Stratagene,CA9203,USA)进行包装,宿主菌使用XL1-Blue MRF’(Stratagene,CA9203,USA)细菌。涂板并测定滴度。Using mRNA as a template, double-stranded cDNA is synthesized, and the reverse transcription primer is shown in SEQ ID NO.1. After blunting the ends, add adapters containing EcoRI cutting points, and the adapter sequences are shown in SEQ ID NO.2 and 3, respectively. After phosphorylation of the EcoRI terminus, it was digested with XhoI restriction endonuclease for 1.5 hours, and then the fragments were separated. Fragments with a length >500bp were screened through the column, extracted with phenol-chloroform, precipitated with ethanol, dissolved in sterile water, connected to the Uni-ZAP XR vector (Stratagene, CA9203, USA), and Zap-cDNA Gigapack Ⅲ Gold Cloning Kit (Stratagene , CA9203, USA) for packaging, the host bacteria used XL1-Blue MRF' (Stratagene, CA9203, USA) bacteria. Plate and measure titer.

4.测序及数据库建立(Seqencing and Database Constructing)4. Sequencing and Database Constructing

挑选文库中有外源片段插入的克隆,扩增后抽提质粒(Qiagen,Germany),用T3和T7作为3’端和5’端的通用引物,采用终止物荧光标记(Big-Dye,Perkin-Elmer,USA)的方法,在ABI377测序仪(Perkin-Elmer,USA)上进行EST大规模测序。测序结果用FACTURA软件去除载体序列,传输到SUN Ultra 450 Server上进行下一步的处理。所有的序列信息再用GCG软件包(Wisconsin group,USA)中的BLAST和FASTA软件搜索已有的数据库(Genebank+EMBL),将无同源性或同源性低于95%的序列视为新基因建立数据库。The clones with foreign fragments inserted in the library were selected, and the plasmids were extracted after amplification (Qiagen, Germany). T3 and T7 were used as universal primers at the 3' and 5' ends, and terminators were fluorescently labeled (Big-Dye, Perkin- Elmer, USA) method, EST large-scale sequencing was carried out on ABI377 sequencer (Perkin-Elmer, USA). The sequencing results were removed from the carrier sequence by FACTURA software and transferred to SUN Ultra 450 Server for further processing. All the sequence information is then searched in the existing database (Genebank+EMBL) with BLAST and FASTA software in the GCG software package (Wisconsin group, USA), and sequences with no homology or homology lower than 95% are regarded as new Gene database.

5.基因的全长克隆(cloning of Full-length cDNA)5. Gene full-length cloning (cloning of Full-length cDNA)

在得到的新基因片段序列信息基础上,进行cDNA全长克隆,分两阶段进行:On the basis of the obtained new gene fragment sequence information, the cDNA full-length clone is carried out in two stages:

(1)“电子克隆”(Electronic Cloning)(1) "Electronic Cloning"

以新基因片段序列作为探针搜寻dbEST数据库,将重叠序列>50bp,同源性在98%以上的表达序列标签(Expressed Sequence Tag,简称“EST”)序列认为同一序列(consensus sequence),取出并用AUTOASSEMBLER软件进行拼接,部分EST可以延伸探针序列。再用STRIDER软件分析被延伸的序列是否具有完整的开放阅读框架(Open Reading Frame,ORF),用BLAST搜寻Genbank或SwissProt以确定该序列在核苷酸和氨基酸水平上是否与其他物种有同源性,以帮助判别所得到的基因全长完整性如何。通过电子克隆的方法,通常可获取人hALC基因的全长序列。Use the new gene fragment sequence as a probe to search the dbEST database, and consider the expressed sequence tag (Expressed Sequence Tag, “EST” for short) sequence with an overlapping sequence > 50bp and a homology of more than 98% as the same sequence (consensus sequence), take it out and use AUTOASSEMBLER software for splicing, part of EST can extend the probe sequence. Then use STRIDER software to analyze whether the extended sequence has a complete open reading frame (Open Reading Frame, ORF), and use BLAST to search Genbank or SwissProt to determine whether the sequence is homologous to other species at the nucleotide and amino acid levels , to help determine the full-length integrity of the obtained gene. By means of electronic cloning, the full-length sequence of the human hALC gene can usually be obtained.

(2)cDNA末端快速扩增(Rapid Amplification of cDNA Ends,RACE)(2) Rapid Amplification of cDNA Ends (RACE)

如果通过“电子克隆”方法仍未得到完整的cDNA全长,则在已有序列的5’或3’端设计引物,在人类肝Marathon-Ready cDNA文库(Clontech Lab,Inc,USA)中进行长距离PCR反应。然后对PCR产物克隆、测序。用AUTOASSEMBLER及STRIDER软件分析被延长的序列有无完整的ORF,如无,重复上述过程直至获得全长。If the complete cDNA full-length has not been obtained by the "electronic cloning" method, then design primers at the 5' or 3' end of the existing sequence, and perform long-length cDNA in the human liver Marathon-Ready cDNA library (Clontech Lab, Inc, USA) distance from the PCR reaction. The PCR products were then cloned and sequenced. Use AUTOASSEMBLER and STRIDER software to analyze whether the extended sequence has a complete ORF, if not, repeat the above process until the full length is obtained.

(3)RT-PCR(3) RT-PCR

对于5’和3’端已知的序列,如果中间尚有一段间隙(gap)无法从已有的公共数据库或自身数据库获得,可考虑采用RT-PCR的方法。在序列5’端设计引物,3’端引物采用Oligo-dT,在肝总RNA库中进行扩增。然后对产物进行克隆、测序。最后拼接并获得全长。For the known sequences at the 5' and 3' ends, if there is still a gap in the middle that cannot be obtained from the existing public database or its own database, RT-PCR may be considered. Primers were designed at the 5' end of the sequence, and Oligo-dT was used as a primer at the 3' end to amplify in the liver total RNA library. The products were then cloned and sequenced. Finally splice and get the full length.

通过组合使用上述3种方法,获得了候选的人hALC蛋白的全长编码序列。在拼接得到全长(至少包含完整的开放读框)的基础上,进一步设计引物R1:5’-TCCAGTGTTTCTGGCAGTTG-3’(SEQ ID NO.4)为正向引物,寡核苷酸R2:5’-TTGTGGTCTGATTGCACCAT-3’(SEQ ID NO.5)为反向引物,以肝的总RNA为模板,进行RT-PCR扩增,R1/R2的PCR条件为94℃5分钟,随之以94℃30秒、60℃30秒和72℃1分钟进行35个循环,最后以72℃延伸5分钟。电泳检测PCR扩增产物,获得扩增片段长度为1988bp。然后按常规方法以PCR扩增产物进行克隆、测序,获得SEQ ID NO.6所示的序列。By using the above three methods in combination, the full-length coding sequence of the candidate human hALC protein was obtained. On the basis of splicing to obtain the full length (including at least the complete open reading frame), further design primer R1: 5'-TCCAGTGTTTCTGGCAGTTG-3' (SEQ ID NO.4) as the forward primer, oligonucleotide R2: 5' -TTGTGGTCTGATTGCACCAT-3'(SEQ ID NO.5) was used as a reverse primer, and the total RNA of the liver was used as a template for RT-PCR amplification. The PCR conditions for R1/R2 were 94°C for 5 minutes, followed by 94°C for 30 35 cycles of 30 seconds at 60°C and 1 minute at 72°C, with a final extension at 72°C for 5 minutes. The PCR amplification product was detected by electrophoresis, and the length of the amplified fragment was 1988bp. Then, the PCR amplification product was cloned and sequenced according to conventional methods to obtain the sequence shown in SEQ ID NO.6.

实施例2Example 2

人hALC基因的序列信息与同源性分析:Sequence information and homology analysis of human hALC gene:

本发明新的人hALC全长cDNA(GenBank Accession No.AY013707。在本申请之前未公开过)的长度为1988bp,详细序列见SEQ ID NO.6,其中开放读框位于31-1671位核苷酸。根据全长cDNA推导出人hALC的氨基酸序列,共546个氨基酸残基,分子量59987.88,pI为5.49。详细序列见SEQ ID NO.7。The novel human hALC full-length cDNA of the present invention (GenBank Accession No.AY013707. It has not been disclosed before this application) has a length of 1988bp, and the detailed sequence is shown in SEQ ID NO.6, wherein the open reading frame is located at 31-1671 nucleotides . The amino acid sequence of human hALC was deduced according to the full-length cDNA, with a total of 546 amino acid residues, a molecular weight of 59987.88, and a pI of 5.49. See SEQ ID NO.7 for the detailed sequence.

将hALC的全长cDNA序列及其编码蛋白质用BLAST程序在Non-redundantGenBank+EMBL+DDBJ+PDB和Non-redundant GenBank CDS translations+PDB+SwissProt+Superdate+PIR数据库中进行核苷酸和蛋白质同源性检索,结果发现它与家鼠的EF-9基因存在一定的同源性。在核苷酸水平上,它与家鼠EF-9基因的mRNA全编码序列(GenBank Accession No.U72678)有86.4%的相同性(附表2),在氨基酸水平上,它与家鼠EF-9蛋白(GenPept Accession No.AAB51038)的第1-154位氨基酸残基有92.9%的相同性和92.0%的相似性(附表3)。由上可见,hALC基因与家鼠EF-9基因无论从核酸还是蛋白水平上都存在较高的同源性,可以认为两者在功能上也有很高相似性。The full-length cDNA sequence of hALC and its encoded protein were used to perform nucleotide and protein homology in the Non-redundant GenBank+EMBL+DDBJ+PDB and Non-redundant GenBank CDS translations+PDB+SwissProt+Superdate+PIR databases using the BLAST program After searching, it was found that it has a certain homology with the EF-9 gene of the house mouse. On the nucleotide level, it has 86.4% identity (attached table 2) with the mRNA full coding sequence (GenBank Accession No.U72678) of the house mouse EF-9 gene, and on the amino acid level, it has the same The amino acid residues 1-154 of the 9 protein (GenPept Accession No. AAB51038) have 92.9% identity and 92.0% similarity (Supplementary Table 3). It can be seen from the above that the hALC gene and the house mouse EF-9 gene have high homology in both nucleic acid and protein levels, and it can be considered that the two also have high similarity in function.

本发明的人hALC除了可作为该家族一员用于进一步的功能研究,还可用于与其他蛋白一起产生融合蛋白,比如与免疫球蛋白一起产生融合蛋白。此外,本发明的人hALC还可以与该家族的其他成员进行融合或交换片段,以产生新的蛋白。例如将本发明的人hALC蛋白的N端与家鼠EF-9蛋白的N端进行交换,以产生新的活性更高或具有新特性的蛋白。In addition to being used as a member of the family for further functional research, the human hALC of the present invention can also be used to produce fusion proteins with other proteins, such as immunoglobulins to produce fusion proteins. In addition, the human hALC of the present invention can also be fused or exchanged fragments with other members of the family to produce new proteins. For example, the N-terminal of the human hALC protein of the present invention is exchanged with the N-terminal of the murine EF-9 protein to produce a new protein with higher activity or new properties.

针对本发明人hALC的抗体,用于筛选该家族的其他成员,或者用于亲和纯化相关蛋白(如该家族的其他成员)。The antibody against human hALC of the present invention is used for screening other members of this family, or for affinity purification of related proteins (such as other members of this family).

此外,本发明人hALC核酸(编码序列或反义序列)可以被引入细胞,以提高人hALC的表达水平或者抑制人hALC的过度表达。本发明的人hALC蛋白或其活性多肽片段可以施用于病人,以治疗或减轻因人hALC缺失、无功能或异常而导致的有关病症。此外,还可以用基于本发明的核酸序列或抗体进行有关的诊断或预后判断。In addition, the human hALC nucleic acid (coding sequence or antisense sequence) of the present invention can be introduced into cells to increase the expression level of human hALC or inhibit the overexpression of human hALC. The human hALC protein or its active polypeptide fragments of the present invention can be administered to patients to treat or alleviate related diseases caused by the absence, non-function or abnormality of human hALC. In addition, the nucleic acid sequence or antibody based on the present invention can also be used for relevant diagnosis or prognosis.

由于本发明的人hALC蛋白具有源自人的天然氨基酸序列,因此,与来源于其他物种(如家鼠)的同族蛋白相比,预计在施用于人时将具有更高的活性和/或更低的副作用(例如在人体内的免疫原性更低或没有)。Since the human hALC protein of the present invention has a natural amino acid sequence derived from humans, it is expected to have higher activity and/or lower side effects (e.g. less or no immunogenicity in humans).

实施例3Example 3

人hALC蛋白的功能研究Functional Study of Human hALC Protein

1、家鼠EF-9基因的表达情况:1. Expression of EF-9 gene in house mouse:

实验证据表明,家鼠EF-9基因在家鼠体内只在肝脏中特异性表达。进一步研究后我们发现,家鼠EF-9基因在家鼠胚胎发育晚期开始表达。Experimental evidence shows that the EF-9 gene of the house mouse is only expressed specifically in the liver in the house mouse. After further research, we found that the expression of the EF-9 gene in the house mouse begins in the late embryonic development of the house mouse.

2、人hALC基因的表达情况:2. Expression of human hALC gene:

通过对hALC基因在大量人体组织中的表达情况进行研究,我们发现hALC基因也仅在人体肝脏特异性表达。但是,在肝癌组织中,hALC基因表达丢失。By studying the expression of hALC gene in a large number of human tissues, we found that hALC gene is also specifically expressed only in human liver. However, in HCC tissues, hALC gene expression was lost.

分析:analyze:

通过对上述实验结果的对比分析,我们可以得出结论:hALC基因可能与组织分化相关,是一种潜在的肝癌疾病检测标记(marker),并且有望在基因治疗中得以应用。Through comparative analysis of the above experimental results, we can draw a conclusion: hALC gene may be related to tissue differentiation, is a potential marker for liver cancer disease detection, and is expected to be applied in gene therapy.

实施例4Example 4

人hALC多肽的制备和提纯Preparation and purification of human hALC polypeptide

在该实施例中,将全长的人hALC编码序列或片段构建入商品化的蛋白质融合表达载体之中,以表达和提纯重组蛋白。In this example, the full-length human hALC coding sequence or fragment was constructed into a commercially available protein fusion expression vector to express and purify the recombinant protein.

将人hALC多肽以GST融合蛋白的形式在大肠杆菌中进行原核表达。Prokaryotic expression of human hALC polypeptide in the form of GST fusion protein in Escherichia coli.

原核表达载体的构建,以及转化大肠杆菌Construction of prokaryotic expression vector and transformation of Escherichia coli

根据人hALC的全长编码序列(SEQ ID NO.6),设计扩增出完整编码阅读框的引物(分别对应于编码序列5’和3’端的约20个以上核苷酸),并在正反引物上分别引入限制性内切酶位点(这根据选用的pGEX-2T载体而定),以便构建表达载体。以实施例1中获得的扩增产物为模板,经PCR扩增后,将人hALC基因在保证阅读框正确的前提下克隆至pGEX-2T载体(Pharmacia,Piscataway,NJ)。鉴定好的表达载体利用CaCl2方法转入大肠杆菌DH5α,筛选鉴定得到含有pGEX-2T-hALC表达载体的工程菌DH5α-pGEX-2T-hALC。According to the full-length coding sequence of human hALC (SEQ ID NO.6), design primers to amplify the complete coding reading frame (corresponding to about 20 or more nucleotides at the 5' and 3' ends of the coding sequence, respectively), and Restriction endonuclease sites were introduced into the anti-primers (this depends on the pGEX-2T vector selected), so as to construct the expression vector. Using the amplification product obtained in Example 1 as a template, after PCR amplification, the human hALC gene was cloned into the pGEX-2T vector (Pharmacia, Piscataway, NJ) under the premise of ensuring the correct reading frame. The identified expression vector was transformed into Escherichia coli DH5α using the CaCl 2 method, and the engineering strain DH5α-pGEX-2T-hALC containing the pGEX-2T-hALC expression vector was screened and identified.

表达GST-hALC重组蛋白的工程菌的分离鉴定Isolation and Identification of Engineering Bacteria Expressing GST-hALC Recombinant Protein

挑取单菌落的DH5α-pGEX-2T-hALC工程菌于3ml含100μg/ml氨苄青霉素的LB培养基中振摇培养过夜,按1∶100的浓度吸取培养液于新的LB培养基(含100μg/ml氨苄青霉素)中培养约3小时,至OD600达0.5后,加入IPTG至终浓度1mmol/L继续于37℃分别培养0,1,2,3小时。取培养时间不同的1ml菌液离心,在细菌沉淀物中加入裂解液(2×SDS上样缓冲液50μl,蒸馏水45μl,二巯基乙醇5μl),混悬细菌沉淀,沸水浴中煮5分钟,10000rpm离心1分钟,上清加入12%SDS-PAGE胶中电泳。染色后观察预期分子量大小的蛋白量随IPTG诱导时间增加而增加的菌株即为表达GST-hALC融合蛋白的工程菌。Pick the DH5α-pGEX-2T-hALC engineering bacteria of a single colony in 3 ml of LB medium containing 100 μg/ml ampicillin and culture overnight with shaking, and draw the culture solution into new LB medium (containing 100 μg/ml ampicillin) at a concentration of 1:100. /ml ampicillin) for about 3 hours, and when the OD 600 reached 0.5, IPTG was added to a final concentration of 1 mmol/L to continue culturing at 37°C for 0, 1, 2, and 3 hours, respectively. Centrifuge 1ml of bacterial solution with different culture time, add lysate (50μl of 2×SDS loading buffer, 45μl of distilled water, 5μl of dimercaptoethanol) to the bacterial sediment, suspend the bacterial sediment, boil in boiling water bath for 5 minutes, 10000rpm Centrifuge for 1 minute, add the supernatant to 12% SDS-PAGE gel electrophoresis. After staining, it is observed that the amount of protein with expected molecular weight increases with the increase of IPTG induction time, which is the engineering bacteria expressing GST-hALC fusion protein.

GST-hALC融合蛋白的提取纯化Extraction and purification of GST-hALC fusion protein

按上述方法诱导表达GST-hALC融合表达蛋白的工程菌DH5α-pGEX-2T-hALC。诱导后的细菌离心沉淀,按每400ml菌加入20ml PBS重悬细菌,超声破碎细菌。破菌完全的超声液按每毫升加入20微升的量加入PBS饱和的50%谷胱苷肽Sepharose4B,37℃振摇结合30分钟,10000rpm离心10分钟沉淀结合了GST-hALC的谷胱苷肽Sepharose4B,弃上清。按每毫升超声液所得沉淀加入100μl PBS的量清洗两次,而后按每毫升超声液所得沉淀加入10μl还原型谷胱苷肽洗脱液,室温置10分钟,10000rpm离心10分钟,上清即为洗脱的融合蛋白。重复洗脱两次。洗脱的上清保存于-80℃,并进行SDS-PAGE电泳,检测纯化效果。在60kDa处的蛋白质条带即为人hALC蛋白。The engineering bacteria DH5α-pGEX-2T-hALC expressing GST-hALC fusion expression protein were induced by the above method. The induced bacteria were centrifuged and precipitated, and 20ml of PBS was added to resuspend the bacteria for every 400ml of bacteria, and the bacteria were sonicated. Add 50% glutathione Sepharose 4B saturated with PBS in an amount of 20 microliters per milliliter to the completely broken bacteria, shake at 37°C for 30 minutes, and centrifuge at 10,000 rpm for 10 minutes to precipitate glutathione bound to GST-hALC Sepharose4B, discard the supernatant. Add 100 μl of PBS to the precipitate obtained in each milliliter of ultrasonic liquid to wash twice, then add 10 μl of reduced glutathione eluent to the precipitate obtained in each milliliter of ultrasonic liquid, place at room temperature for 10 minutes, centrifuge at 10,000 rpm for 10 minutes, and the supernatant is Eluted fusion protein. Repeat the elution twice. The eluted supernatant was stored at -80°C, and subjected to SDS-PAGE electrophoresis to detect the purification effect. The protein band at 60kDa is human hALC protein.

实施例5Example 5

人hALC蛋白或多肽在昆虫细胞中进行真核细胞表达Eukaryotic expression of human hALC protein or polypeptide in insect cells

1.人hALC杆状病毒表达载体的构建及转染Sf9昆虫细胞株1. Construction of Human hALC Baculovirus Expression Vector and Transfection to Sf9 Insect Cell Line

根据人hALC的全长编码序列(SEQ ID NO.6),设计扩增出完整编码阅读框的引物,并在正反引物上分别引入限制性内切酶位点(这可视选用的载体而定),以便构建表达载体。以实施例1中获得的扩增产物为模板,经PCR扩增后,将人hALC cDNA在保证阅读框架的前提下克隆至pVL1392载体(Invitrogen,Carlsbad,CA)。鉴定好的表达载体3μg,野生型线性杆状病毒DNA(BaculoGoldTM ACMNPV DNA,Pharmingen,San Diego,CA)1μg和Lipofection(Gibco-BRL,NY)25μl,加入1ml无血清的昆虫培养基中,振荡15秒混匀,室温孵育15分钟备用。取1ml(2×106)Sf9昆虫细胞悬液于60mm组织培养板中,贴壁1小时后换转染培养基,室温孵育15分钟后弃培养基,加入前面制备好的DNA载体转染混合物,Parafilm密封培养板,于室温27℃振摇培养4小时,而后换完全培养基培养3天,收集上清备用。According to the full-length coding sequence of human hALC (SEQ ID NO.6), design primers to amplify the complete coding reading frame, and introduce restriction endonuclease sites on the forward and reverse primers respectively (this may vary depending on the carrier selected). ) to construct expression vectors. Using the amplification product obtained in Example 1 as a template, after PCR amplification, the human hALC cDNA was cloned into pVL1392 vector (Invitrogen, Carlsbad, CA) under the premise of ensuring the reading frame. Add 3 μg of the identified expression vector, 1 μg of wild-type linear baculovirus DNA (BaculoGold TM ACMNPV DNA, Pharmingen, San Diego, CA) and 25 μl of Lipofection (Gibco-BRL, NY) to 1 ml of serum-free insect culture medium, shake Mix for 15 seconds and incubate at room temperature for 15 minutes. Take 1ml (2×10 6 ) of Sf9 insect cell suspension in a 60mm tissue culture plate, change the transfection medium after 1 hour of attachment, discard the medium after incubating at room temperature for 15 minutes, and add the prepared DNA vector transfection mixture , Seal the culture plate with Parafilm, shake and culture at room temperature 27°C for 4 hours, then change the complete medium and culture for 3 days, and collect the supernatant for use.

2.转入重组表达载体的昆虫细胞株的筛选鉴定2. Screening and identification of insect cell lines transformed with recombinant expression vector

转染3天后的昆虫细胞用新鲜培养基制成细胞悬液(2×106/1ml),取1ml细胞悬液置于60mm组织培养皿中,加入3ml培养基,100μl收集的培养上清,贴壁1小时,弃2ml培养基,继续室温培养1小时,弃去所有的培养基,加入预热的含20μl4%X-gal的3ml半固体培养基,培养5-7天后挑取白色细胞克隆于96孔培养板中培养3-5天,而后吸取上清感染Sf9昆虫细胞。Insect cells 3 days after transfection were made into cell suspension (2×10 6 /1ml) with fresh medium, 1ml of cell suspension was placed in a 60mm tissue culture dish, 3ml of medium was added, and 100μl of culture supernatant collected, Adhere to the wall for 1 hour, discard 2ml of medium, continue to culture at room temperature for 1 hour, discard all the medium, add 3ml of preheated semi-solid medium containing 20μl of 4% X-gal, pick white cell clones after 5-7 days of culture Cultured in a 96-well culture plate for 3-5 days, and then aspirate the supernatant to infect Sf9 insect cells.

收集感染的细胞进行Western鉴定。将细胞裂解后进行SDS-PAGE电泳,电泳后的胶于Pharmacia的MultiphorⅡ半干电转移仪中将蛋白质转印到硝酸纤维膜上,将硝酸纤维膜置于封闭液中封闭1小时,而后于抗人hALC的抗体溶液中封闭1小时,TBS液振摇清洗5分钟共2次,而后将膜置于生物素标记的抗人hALC一抗的第二抗体溶液中振摇1小时,TBS清洗,加入亲和素-碱性磷酸酶复合物反应30分钟,TBS清洗2次,加入新鲜配制的显色液显色观察蛋白条带。Infected cells were collected for Western identification. After the cells were lysed, SDS-PAGE electrophoresis was performed. The gel after electrophoresis was transferred to the nitrocellulose membrane in Pharmacia's Multiphor II semi-dry electrotransfer instrument, and the nitrocellulose membrane was placed in the blocking solution for blocking for 1 hour, and then placed in the anti- Human hALC antibody solution was blocked for 1 hour, TBS solution was shaken and washed for 5 minutes, a total of 2 times, and then the membrane was placed in biotin-labeled anti-human hALC primary antibody secondary antibody solution, shaken for 1 hour, TBS washed, added React the avidin-alkaline phosphatase complex for 30 minutes, wash twice with TBS, add freshly prepared chromogenic solution to develop color and observe protein bands.

挑取高表达人hALC的Sf9细胞克隆。Sf9 cell clones that highly express human hALC were picked.

3.人hALC蛋白的提取纯化3. Extraction and purification of human hALC protein

用高表达人hALC的Sf9细胞克隆的上清大量感染Sf9细胞,感染48小时后收集细胞,PBS洗涤。每2×108细胞加入20ml细胞裂解液(0.5%Triton X-100,20mMNa3PO4(磷酸钠,pH7.8),500mM NaCl,1mM Na3VO4(钒酸钠),1mM Pefabloc,1μg/ml胃蛋白酶抑制剂,亮抑蛋白酶肽和抑蛋白酶肽)破细胞,12000×g离心20min去除细胞碎片,上清按每2×108的细胞加入2ml NTA-琼脂糖(Qiagen,Germany),4℃吸附1小时。而后用含100nM咪唑的His缓冲液洗涤两次,用含20mM N,N’-二哌嗪,500mM NaCl,300mM咪唑的缓冲液洗脱以得到纯化的蛋白。洗脱液保存于4℃,并进行SDS-PAGE电泳检测提取的人hALC蛋白的纯度。在60kDa处的蛋白质条带即为人hALC蛋白。The supernatant of Sf9 cell clones highly expressing human hALC was used to infect a large number of Sf9 cells. After 48 hours of infection, the cells were collected and washed with PBS. Add 20ml of cell lysate (0.5% Triton X- 100 , 20mM Na 3 PO 4 (sodium phosphate, pH7.8), 500mM NaCl, 1mM Na 3 VO 4 (sodium vanadate), 1mM Pefabloc, 1μg per 2×10 8 cells /ml pepsin inhibitor, leupeptin and aprotinin) to break the cells, centrifuge at 12000×g for 20min to remove cell debris, add 2ml NTA-agarose (Qiagen, Germany) to the supernatant for every 2× 108 cells, Adsorption at 4°C for 1 hour. Then, it was washed twice with His buffer containing 100 nM imidazole, and eluted with a buffer containing 20 mM N,N'-dipiperazine, 500 mM NaCl, and 300 mM imidazole to obtain a purified protein. The eluate was stored at 4°C, and the purity of the extracted human hALC protein was detected by SDS-PAGE electrophoresis. The protein band at 60kDa is human hALC protein.

实施例6Example 6

抗人hALC抗体的制备Preparation of anti-human hALC antibody

1.免疫小鼠和脾细胞的制备:将实施例5和实施例6中获得的人hALC蛋白用层析法进行分离后备用,也可以用SDS-PAGE凝胶电泳法进行分离,将电泳条带从凝胶中割下,并用等体积的完全Freund’s佐剂乳化。取6-8周龄Balb/C雌鼠,用50-100μg/0.2ml乳化过的蛋白,对小鼠进行腹膜内注射。14天后,用非完全Freund’s佐剂乳化的同样抗原对小鼠以50-100μg/0.2ml的剂量再加强免疫一次,3-5天后用于融合。其中,脾细胞制备见鄂征主编,《组织培养和分子细胞学技术》,北京出版社,第210页。1. Preparation of immunized mice and splenocytes: The human hALC protein obtained in Example 5 and Example 6 was separated by chromatography and then used for later use, or it could be separated by SDS-PAGE gel electrophoresis, and the electrophoresis band was separated from Gel and emulsified with an equal volume of complete Freund's adjuvant. Take 6-8 week-old Balb/C female mice, and inject them intraperitoneally with 50-100 μg/0.2ml emulsified protein. After 14 days, the mice were boosted with the same antigen emulsified with incomplete Freund's adjuvant at a dose of 50-100 μg/0.2ml, and used for fusion after 3-5 days. Among them, for the preparation of spleen cells, see E Zheng, editor-in-chief, "Tissue Culture and Molecular Cytology", Beijing Publishing House, p. 210.

2.按《组织培养和分子细胞学技术》(同上),第371页中的方法,制备饲养细胞。2. Feeder cells were prepared according to the method on page 371 of "Tissue Culture and Molecular Cytological Techniques" (supra).

3.按《组织培养和分子细胞学技术》(同上),第213页中的方法,进行细胞融合。3. Cell fusion was carried out according to the method on page 213 of "Tissue Culture and Molecular Cytology Techniques" (supra).

4.抗体的检测:在细胞融合10-15天后,需逐孔进行检查,一旦发现旺盛的杂交细胞集落生长,就应用人hALC蛋白做抗体活性的初步筛选,常用的方法有:免疫荧光试验、发射免疫试验(RIA)、酶联免疫吸附试验(ELISA)。检查出抗体活性的孔后,立刻进行克隆培养,并分离出抗体。4. Antibody detection: After 10-15 days of cell fusion, it is necessary to check each hole. Once vigorous hybrid cell colony growth is found, human hALC protein is used for preliminary screening of antibody activity. Commonly used methods include: immunofluorescence test, emission immunoassay assay (RIA), enzyme-linked immunosorbent assay (ELISA). Immediately after the wells with antibody activity were detected, the clones were cultured and the antibodies were isolated.

本发明涉及的序列及记号分列如下:The sequences and symbols involved in the present invention are listed as follows:

(1)SEQ ID NO.1的信息(1) Information on SEQ ID NO.1

(ⅰ)序列特征:(i) Sequence features:

    (A)长度:50bp(A) Length: 50bp

    (B)类型:核苷酸(B) Type: Nucleotide

    (C)链性:单链(C) chain: single chain

    (D)拓扑结构:线性(D) Topology: linear

(ⅱ)分子类型:寡核苷酸(ii) Molecular type: oligonucleotide

(ⅲ)序列描述:SEQ ID NO.1GAGAGAGAGAGAGAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTT 50(ⅲ) Sequence description: SEQ ID NO.1GAGAGAGAGAGAGAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTT 50

(2)SEQ ID NO.2的信息(2) Information of SEQ ID NO.2

(ⅰ)序列特征:(i) Sequence features:

    (A)长度:13bp(A) Length: 13bp

    (B)类型:核苷酸(B) Type: Nucleotide

    (C)链性:单链(C) chain: single chain

    (D)拓扑结构:线性(D) Topology: Linear

(ⅱ)分子类型:寡核苷酸(ii) Molecular type: oligonucleotide

(ⅲ)序列描述:SEQ ID NO.2(iii) Sequence description: SEQ ID NO.2

AATTCGGCAC GA G                                  13AATTCGGCAC GA G 13

(3)SEQ ID NO.3的信息(3) Information of SEQ ID NO.3

(ⅰ)序列特征:(i) Sequence features:

    (A)长度:9bp(A) Length: 9bp

    (B)类型:核苷酸(B) Type: Nucleotide

    (C)链性:单链(C) chain: single chain

    (D)拓扑结构:线性(D) Topology: linear

(ⅱ)分子类型:寡核苷酸(ii) Molecular type: oligonucleotide

(ⅲ)序列描述:SEQ ID NO.3(iii) Sequence description: SEQ ID NO.3

GCCGTGCTC                                         9(4)SEQ ID NO.4的信息(ⅰ).序列特征:GCCGTGCTC 9(4) Information on SEQ ID NO.4 (ⅰ). Sequence features:

(A)长度:20bp(A) Length: 20bp

(B)类型:核苷酸(B) Type: Nucleotide

(C)链性:单链(C) chain: single chain

(D)拓扑结构:线性(ⅱ).分子类型:寡核苷酸(ⅲ).序列描述:SEQ ID NO.4TCCAGTGTTTCTGGCAGTTG                               20(5)SEQ ID NO.5的信息(ⅰ).序列特征:(D) Topological structure: linear (ii). Molecular type: oligonucleotide (Ⅲ). Sequence description: SEQ ID NO.4TCCAGTGTTTCTGGCAGTTG 20(5) Information of SEQ ID NO.5 (ⅰ). Sequence features:

(A)长度:20bp(A) Length: 20bp

(B)类型:核苷酸(B) Type: Nucleotide

(C)链性:单链(C) chain: single chain

(D)拓扑结构:线性(ⅱ).分子类型:寡核苷酸(ⅲ).序列描述:SEQ ID NO.5TTGTGGTCTGATTGCACCAT                               20(6)SEQ ID NO.6的信息(ⅰ)序列特征:(D) Topological structure: linear (ii). Molecular type: oligonucleotide (Ⅲ). Sequence description: SEQ ID NO.5TTGTGGTCTGATTGCACCAT 20(6) Information of SEQ ID NO.6 (ⅰ) Sequence characteristics:

(A)长度:1988bp(A) Length: 1988bp

(B)类型:核苷酸(B) Type: Nucleotide

(C)链性:单链(C) chain: single chain

(D)拓扑结构:线性(ⅱ)分子类型:核苷酸(ⅲ)序列描述:SEQ ID NO.61 TCCAGTGTTT CTGGCAGTTG GTCCAGAAGG ATGCCTCCAT TCCTGCTTCT51 CACCTGCCTC TTCATCACAG GCACCTCCGT GTCACCCGTG GCCCTAGATC101 CTTGTTCTGC TTACATCAGC CTGAATGAGC CCTGGAGGAA CACTGACCAC151 CAGTTGGATG AGTCTCAAGG TCCTCCTCTA TGTGACAACC ATGTGAATGG201 GGAGTGGTAC CACTTCACGG GCATGGCGGG AGATGCCATG CCTACCTTCT251 GCATACCAGA AAACCACTGT GGAACCCACG CACCTGTCTG GCTCAATGGC301 AGCCACCCCC TAGAAGGCGA CGGCATTGCG CAACTGCCAG GCTTGTGCCA351 CGCTTCAATG GGAACTGCTG TCTCTGGAAC ACCACGGTGG AAGTCAAGGC401 TTGCCCTTGG AGGCTACTAT GTGTATCGTC TGACCAAGCC CAGCGTCTGC 451 TTCCACGTCT ACTGTGGTCA TTTTTATGAC ATCTGCGACG AGGACTGCCA501 TGGCAGCTGC TCAGATACCA GCGAGTGCAC ATGCGCTCCA GGAACTGTGC551 TAGGCCCTGA CAGGCAGACA TGCTTTGATG AAAATGAATG TGAGCAAAAC601 AACGGTGGCT GCAGTGAGAT CTGTGTGAAC CTCAAAAACT CCTACCGCTG651 TGAGTGTGGG GTTGGCCGTG TGCTAAGAAG TGATGGCAAG ACTTGTGAAG701 ACGTTGAAGG ATGCCACAAT AACAATGGTG GCTGCAGCCA CTCTTGCCTT751 GGATCTGAGA AAGGCTACCA GTGTGAATGT CCCCGGGGCC TGGTGCTGTC801 TGAGGATAAC CACACTTGCC AAGTCCCTGT GTTGTGCAAA TCAAATGCCA851 TTGAAGTGAA CATCCCCAGG GAGCTGGTTG GTGGCCTGGA GCTCTTCCTG901 ACCAACACCT CCTGCCGAGG AGTGTCCAAC GGCACCCATG TCAACATCCT951 CTTCTCTCTC AAGACATGTG GTACAGTGGT CGATGTGGTG AATGACAAGA1001 TTGTGGCCAG CAACCTCGTG ACAGGTCTAC CCAAGCAGAC CCCGGGGAGC1051 AGCGGGGACT TCATCATCCG AACCAGCAAG CTGCTGATCC CGGTGACCTG1101 CGAGTTTCCA CGCCTGTACA CCATTTCTGA AGGATACGTT CCCAACCTTC1151 GAAACTCCCC ACTGGAAATC ATGAGCCGAA ATCATGGGAT CTTCCCATTC1201 ACTCTGGAGA TCTTCAAGGA CAATGAGTTT GAAGAGCCTT ACCGGGAAGC1251 TCTGCCCACC CTCAAGCTTC GTGACTCCCT CTACTTTGGC ATTGAGCCCG1301 TGGTGCACGT GAGCGGCTTG GAAAGCTTGG TGGAGAGCTG CTTTGCCACC1351 CCCACCTCCA AGATCGACGA GGTCCTGAAA TACTACCTCA TCCGGGATGG1401 CTGTGTTTCA GATGACTCGG TAAAGCAGTA CACATCCCGG GATCACCTAG1451 CAAAGCACTT CCAGGTCCCT GTCTTCAAGT TTGTGGGCAA AGACCACAAG1501 GAAGTGTTTC TGCACTGCCG GGTTCTTGTC TGTGGAGTGT TGGACGAGCG1551 TTCCCGCTGT GCCCAGGGTT GCCACCGGCG AATGCGTCGT GGGGCAGGAG1601 GAGAGGACTC AGCCGGTCTA CAGGGCCAGA CGCTAACAGG CGGCCCGATC1651 CGCATCGACT GGGAGGACTA GTTCGTAGCC ATACCTCGAG TCCCTGCATT1701 GGACGGCTCT GCTCTTTGGA GCTTCTCCCC CCACCGCCCT CTAAGAACAT1751 CTGCCAACAG CTGGGTTCAG ACTTCACACT GTGAGTTCAG ACTCCCAGCA1801 CCAACTCACT CTGATTCTGG TCCATTCAGT GGGCACAGGT CACAGCACTG1851 CTGAACAATG TGGCCTGGGT GGGGTTTCAT CTTTCTAGGG TTGAAAACTA1901 AACTGTCCAC CCAGAAAGAC ACTCACCCCA TTTCCCTCAT TTCTTTCCTA1951 CACTTAAATA CCTCGTGTAT GGTGCAATCA GACCACAA(7)SEQ ID NO.7的信息(D)拓扑结构:线性(ⅱ)分子类型:核苷酸(ⅲ)序列描述:SEQ ID NO.61 TCCAGTGTTT CTGGCAGTTG GTCCAGAAGG ATGCCTCCAT TCCTGCTTCT51 CACCTGCCTC TTCATCACAG GCACCTCCGT GTCACCCGTG GCCCTAGATC101 CTTGTTCTGC TTACATCAGC CTGAATGAGC CCTGGAGGAA CACTGACCAC151 CAGTTGGATG AGTCTCAAGG TCCTCCTCTA TGTGACAACC ATGTGAATGG201 GGAGTGGTAC CACTTCACGG GCATGGCGGG AGATGCCATG CCTACCTTCT251 GCATACCAGA AAACCACTGT GGAACCCACG CACCTGTCTG GCTCAATGGC301 AGCCACCCCC TAGAAGGCGA CGGCATTGCG CAACTGCCAG GCTTGTGCCA351 CGCTTCAATG GGAACTGCTG TCTCTGGAAC ACCACGGTGG AAGTCAAGGC401 TTGCCCTTGG AGGCTACTAT GTGTATCGTC TGACCAAGCC CAGCGTCTGC 451 TTCCACGTCT ACTGTGGTCA TTTTTATGAC ATCTGCGACG AGGACTGCCA501 TGGCAGCTGC TCAGATACCA GCGAGTGCAC ATGCGCTCCA GGAACTGTGC551 TAGGCCCTGA CAGGCAGACA TGCTTTGATG AAAATGAATG TGAGCAAAAC601 AACGGTGGCT GCAGTGAGAT CTGTGTGAAC CTCAAAAACT CCTACCGCTG651 TGAGTGTGGG GTTGGCCGTG TGCTAAGAAG TGATGGCAAG ACTTGTGAAG701 ACGTTGAAGG ATGCCACAAT AACAATGGTG GCTGCAGCCA CTCTTGCCTT751 GGATCTGAGA AAGGCTACCA GTGTGAATGT CCCCGGGGCC TGGTGCTGTC801 TGAGGATAAC CACACTTGCC AAGTCCCTGT GTTGTGCAAA TCAAATGCCA851 TTGAAGTGAA CATCCCCAGG GAGCTGGTTG GTGGCCTGGA GCTCTTCCTG901 ACCAACACCT CCTGCCGAGG AGTGTCCAAC GGCACCCATG TCAACATCCT951 CTTCTCTCTC AAGACATGTG GTACAGTGGT CGATGTGGTG AATGACAAGA1001 TTGTGGCCAG CAACCTCGTG ACAGGTCTAC CCAAGCAGAC CCCGGGGAGC1051 AGCGGGGACT TCATCATCCG AACCAGCAAG CTGCTGATCC CGGTGACCTG1101 CGAGTTTCCA CGCCTGTACA CCATTTCTGA AGGATACGTT CCCAACCTTC1151 GAAACTCCCC ACTGGAAATC ATGAGCCGAA ATCATGGGAT CTTCCCATTC1201 ACTCTGGAGA TCTTCAAGGA CAATGAGTTT GAAGAGCCTT ACCGGGAAGC1251 TCTGCCCACC CTCAAGCTTC GTGACTCCCT CTACTTTGGC ATTGAGCCCG1301 TGGTGCACGT GAGCGGCTTG GAAAGCTTGG TGGAGAGCTG CTTTGCCACC1351 CCCACCTCCA AGATCGACGA GGTCCTGAAA TACTACCTCA TCCGGGATGG1401 CTGTGTTTCA GATGACTCGG TAAAGCAGTA CACATCCCGG GATCACCTAG1451 CAAAGCACTT CCAGGTCCCT GTCTTCAAGT TTGTGGGCAA AGACCACAAG1501 GAAGTGTTTC TGCACTGCCG GGTTCTTGTC TGTGGAGTGT TGGACGAGCG1551 TTCCCGCTGT GCCCAGGGTT GCCACCGGCG AATGCGTCGT GGGGCAGGAG1601 GAGAGGACTC AGCCGGTCTA CAGGGCCAGA CGCTAACAGG CGGCCCGATC1651 CGCATCGACT GGGAGGACTA GTTCGTAGCC ATACCTCGAG TCCCTGCATT1701 GGACGGCTCT GCTCTTTGGA GCTTCTCCCC CCACCGCCCT CTAAGAACAT1751 CTGCCAACAG CTGGGTTCAG ACTTCACACT GTGAGTTCAG ACTCCCAGCA1801 CCAACTCACT CTGATTCTGG TCCATTCAGT GGGCACAGGT CACAGCACTG1851 CTGAACAATG TGGCCTGGGT GGGGTTTCAT CTTTCTAGGG TTGAAAACTA1901 AACTGTCCAC CCAGAAAGAC ACTCACCCCA TTTCCCTCAT TTCTTTCCTA1951 CACTTAAATA CCTCGTGTAT GGTGCAATCA GACCACAA(7)SEQ ID NO.7的信息

(ⅰ)序列特征:(i) Sequence features:

    (A)长度:546氨基酸(A) Length: 546 amino acids

    (B)类型:氨基酸(B) type: amino acid

    (C)链性:单链(C) chain: single chain

    (D)拓扑结构:线性(D) Topology: linear

(ⅱ)分子类型:多肽(ii) Molecular type: polypeptide

(ⅲ)序列描述:SEQ ID NO.7:1 MPPFLLLTCL FITGTSVSPV ALDPCSAYIS LNEPWRNTDH QLDESQGPPL51 CDNHVNGEWY HFTGMAGDAM PTFCIPENHC GTHAPVWLNG SHPLEGDGIA101 QLPGLCHASM GTAVSGTPRW KSRLALGGYY VYRLTKPSVC FHVYCGHFYD151 ICDEDCHGSC SDTSECTCAP GTVLGPDRQT CFDENECEQN NGGCSEICVN201 LKNSYRCECG VGRVLRSDGK TCEDVEGCHN NNGGCSHSCL GSEKGYQCEC251 PRGLVLSEDN HTCQVPVLCK SNAIEVNIPR ELVGGLELFL TNTSCRGVSN301 GTHVNILFSL KTCGTVVDVV NDKIVASNLV TGLPKQTPGS SGDFIIRTSK351 LLIPVTCEFP RLYTISEGYV PNLRNSPLEI MSRNHGIFPF TLEIFKDNEF401 EEPYREALPT LKLRDSLYFG IEPVVHVSGL ESLVESCFAT PTSKIDEVLK451 YYLIRDGCVS DDSVKQYTSR DHLAKHFQVP VFKFVGKDHK EVFLHCRVLV501 CGVLDERSRC AQGCHRRMRR GAGGEDSAGL QGQTLTGGPI RIDWED(ⅲ)序列描述:SEQ ID NO.7:1 MPPFLLLTCL FITGTSVSPV ALDPCSAYIS LNEPWRNTDH QLDESQGPPL51 CDNHVNGEWY HFTGMAGDAM PTFCIPENHC GTHAPVWLNG SHPLEGDGIA101 QLPGLCHASM GTAVSGTPRW KSRLALGGYY VYRLTKPSVC FHVYCGHFYD151 ICDEDCHGSC SDTSECTCAP GTVLGPDRQT CFDENECEQN NGGCSEICVN201 LKNSYRCECG VGRVLRSDGK TCEDVEGCHN NNGGCSHSCL GSEKGYQCEC251 PRGLVLSEDN HTCQVPVLCK SNAIEVNIPR ELVGGLELFL TNTSCRGVSN301 GTHVNILFSL KTCGTVVDVV NDKIVASNLV TGLPKQTPGS SGDFIIRTSK351 LLIPVTCEFP RLYTISEGYV PNLRNSPLEI MSRNHGIFPF TLEIFKDNEF401 EEPYREALPT LKLRDSLYFG IEPVVHVSGL ESLVESCFAT PTSKIDEVLK451 YYLIRDGCVS DDSVKQYTSR DHLAKHFQVP VFKFVGKDHK EVFLHCRVLV501 CGQLGLDERSRC AQGCGRDRSRID

                      附表2

Figure A0110534000211
h.seq:人hALC蛋白的核酸序列(GenBank Accession No.AY013707)m.seq:家鼠EF-9蛋白的核酸序列(GenBank Accession No.U72678)Schedule 2
Figure A0110534000211
h.seq: Nucleic acid sequence of human hALC protein (GenBank Accession No.AY013707) m.seq: Nucleic acid sequence of murine EF-9 protein (GenBank Accession No.U72678)

                      附表3

Figure A0110534000212
h.pep:人hALC蛋白氨基酸序列m.pep:家鼠EF-9蛋白氨基酸序列(GenBank Accession No.AAB51038)Schedule 3
Figure A0110534000212
h.pep: amino acid sequence of human hALC protein m.pep: amino acid sequence of house mouse EF-9 protein (GenBank Accession No.AAB51038)

Claims (11)

1. isolated dna molecular, it is characterized in that, it comprises: coding has the nucleotide sequence of the polypeptide of people hALC protein active, and shows at least 70% homology from the nucleotides sequence of Nucleotide 31-1671 position among described nucleotide sequence and the SEQ ID NO.6; Perhaps described nucleotide sequence can be under the moderate stringent condition with SEQ ID NO.6 in from the nucleotide sequence hybridization of Nucleotide 31-1671 position.
2. dna molecular as claimed in claim 1 is characterized in that, described sequence encoding has the polypeptide of the aminoacid sequence shown in the SEQ ID NO.7.
3. dna molecular as claimed in claim 1 is characterized in that, this sequence has among the SEQ ID NO.6 nucleotide sequence from Nucleotide 31-1671 position.
4. isolated people hALC protein polypeptide is characterized in that it comprises: have polypeptide or its conservative property variation polypeptide or its active fragments of SEQ ID NO.7 aminoacid sequence, or its reactive derivative.
5. polypeptide as claimed in claim 4 is characterized in that, this polypeptide is to have SEQ ID NO.7 polypeptide of sequence.
6. a carrier is characterized in that, it comprises the described DNA of claim 1.
7. one kind with the described carrier transformed host cells of claim 6, it is characterized in that it comprises prokaryotic cell prokaryocyte and eukaryotic cell.
8. a generation has the method for the polypeptide of people hALC protein active, is characterised in that its step is as follows:
(1) nucleotide sequence that coding is had a polypeptide of people hALC protein-active operationally is connected in expression regulation sequence, form people hALC protein expression vector, show at least 70% homology from the nucleotides sequence of Nucleotide 31-1671 position among described nucleotide sequence and the SEQ ID NO.6;
(2) change the expression vector in the step (1) over to host cell, form the proteic reconstitution cell of people hALC;
(3) under the condition that is fit to expressing human hALC protein polypeptide, the reconstitution cell in the culturing step (2);
(4) isolate polypeptide with people hALC protein-active.
9. energy and the described people hALC of claim 7 protein polypeptide specificity bonded antibody is characterized in that it comprises polyclonal antibody and monoclonal antibody.
10. a nucleic acid molecule is characterized in that, it comprises 8-100 continuous nucleotide in the described dna molecular of claim 1.
11. one kind is used for the method whether test sample exists people hALC nucleotide sequence, it is characterized in that it comprises with described probe of claim 10 and sample hybridizes, whether detection probes combination has taken place then, this sample is the product behind the pcr amplification, wherein the pcr amplification primer is corresponding to people hALC nucleotide coding sequence, and can be positioned at the both sides or the centre of this encoding sequence, primer length is 15~50 Nucleotide.
CN01105340A 2001-02-15 2001-02-15 Human liver cancer related cancer suppressing protein and its coding sequence Pending CN1316515A (en)

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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN100410273C (en) * 2006-05-26 2008-08-13 武汉大学 Tumor suppressor proteins and their genes and uses

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN100410273C (en) * 2006-05-26 2008-08-13 武汉大学 Tumor suppressor proteins and their genes and uses

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