CN1309138A - Human testicular cytodifferentiation related protein gene coded protein - Google Patents
Human testicular cytodifferentiation related protein gene coded protein Download PDFInfo
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Abstract
本发明属于人类基因组技术领域,所述人睾丸细胞分化相关蛋白基因,全长cDNA序列为963bp,其开放阅读框为672bp,编码224个氨基酸,该基因在基因库(Genbank)中的编号为AF288404。利用本发明的人睾丸细胞分化相关蛋白基因表达克隆,可制备融合蛋白,用该蛋白免疫动物可制备单克隆和多克隆抗体,并可将基因克隆用于睾丸特异功能基因表达芯片的制备。The invention belongs to the field of human genome technology. The human testicular cell differentiation-related protein gene has a full-length cDNA sequence of 963 bp, an open reading frame of 672 bp, and encodes 224 amino acids. The number of the gene in Genbank (Genbank) is AF288404 . The human testis cell differentiation-related protein gene expression clone of the present invention can be used to prepare a fusion protein, and the protein can be used to immunize animals to prepare monoclonal and polyclonal antibodies, and the gene clone can be used for the preparation of testicular specific function gene expression chips.
Description
本发明属于人类基因组技术领域。The invention belongs to the technical field of human genome.
本发明所述人睾丸细胞分化相关蛋白基因是发明人在南京医科大学生殖医学江苏省重点实验室用基因芯片方法筛选获得,首先制备人睾丸功能基因表达芯片,通过比较胚胎和成年人睾丸功能基因的表达,获得差异表达克隆,经序列测定证明为全长cDNA,为963bp;其开放阅读框架为672bp,其编码224个氨基酸。查阅基因库,该基因与小鼠的pinch蛋白基因同源,该基因表达蛋白与细胞分化有关。由于该基因是成人睾丸高表达,而胚胎与成人睾丸的主要差别是后者有精子发生,而精子发生就是细胞分裂和分化的过程,提示该基因与精子发生有关。用该基因克隆可制备成融合蛋白,用该蛋白免疫家兔,可获得单克隆和多克隆抗体,该基因也可用于制备睾丸功能基因表达芯片。The human testis cell differentiation-related protein gene of the present invention was obtained by the inventors in the Key Laboratory of Reproductive Medicine of Nanjing Medical University in Jiangsu Province by using the gene chip method. First, a human testis functional gene expression chip was prepared, and the functional genes of the embryo and adult testis were compared. Differential expression clones were obtained, which were proved to be full-length cDNAs of 963 bp by sequence determination; their open reading frame was 672 bp, and they encoded 224 amino acids. Check the gene bank, the gene is homologous to the mouse pinch protein gene, and the protein expressed by this gene is related to cell differentiation. Since this gene is highly expressed in adult testis, and the main difference between embryo and adult testis is that the latter has spermatogenesis, and spermatogenesis is the process of cell division and differentiation, suggesting that this gene is related to spermatogenesis. The gene clone can be used to prepare a fusion protein, and the protein can be used to immunize rabbits to obtain monoclonal and polyclonal antibodies, and the gene can also be used to prepare a testis function gene expression chip.
由于人睾丸细胞分化相关蛋白基因在Genbank数据库中尚无人的同源基因,本发明人对于该基因的结构和功能研究成果全都是开创性的。美国国家生物技术情报中心(National Center for BiotechnologyInformation,NCBI)已正式接受该基因为Genbank的新成员,接受号为AF288404。Since the human testis cell differentiation-related protein gene has no homologous gene in the Genbank database, the inventors' research results on the structure and function of this gene are all groundbreaking. The National Center for Biotechnology Information (NCBI) has officially accepted the gene as a new member of Genbank, the acceptance number is AF288404.
1 ttctcatccc tgtgctcaga gctctcaagc acccacgatg gccttctcag gccgagcgcg1 ttctcatccc tgtgctcaga gctctcaagc accacgatg gccttctcag gccgagcgcg
61 cccctgcatt atcccagaga acgaagaaat cccccgagca gcccttaaca ctgtccacga61 cccctgcatt atcccagaga acgaagaaat cccccgagca gcccttaaca ctgtccacga
121 ggccaatggg accgaggacg agagggctgt ttccaaactg cagcgcaggc acagtgacgt121 ggccaatggg accgaggacg agagggctgt ttccaaactg cagcgcaggc acagtgacgt
181 gaaagtctac aaggagttct gtgactttta tgcgaaattc aacatggcca acgccctggc181 gaaagtctac aaggagttct gtgactttta tgcgaaattc aacatggcca acgccctggc
241 cagcgccact tgcgagcgct gcaagggcgg ctttgcgccc gctgagacga tcgtgaacag241 cagcgccact tgcgagcgct gcaagggcgg ctttgcgccc gctgagacga tcgtgaacag
301 taatggggag ctgtaccatg agcagtgttt cgtgtgcgct cagtgcttcc agcagttccc301 taatggggag ctgtaccatg agcagtgttt cgtgtgcgct cagtgcttcc agcagttccc
361 agaaggactc ttctatgagg aacgaacgtg atggttaagc taccttcatt aagcagcatg361 agaaggactc ttctatgagg aacgaacgtg atggttaagc taccttcatt aagcagcatg
421 accgcttctg agctcctgct gccgcattta ggccctgtca gctgtgaggc cactggtgct421 accgcttctg agctcctgct gccgcattta ggccctgtca gctgtgaggc cactggtgct
481 gagtcaaagg gaaaagctca gaacagcctt gacagcgaag aataaagcat gactcatctc481 gagtcaaagg gaaaagctca gaacagcctt gacagcgaag aataaagcat gactcatctc
541 gtcctgccca cccctcacac tggactataa ataccctccc tgggtctgtg tgctgttatt541 gtcctgccca cccctcacac tggactataa ataccctccc tgggtctgtg tgctgttatt
601 ccaaaagatg cgatgaatcc cagaactagg ctattcatgg gctgttgccc agttcaagct601 ccaaaagatg cgatgaatcc cagaactagg ctattcatgg gctgttgccc agttcaagct
661 ctattgggtc ctgaggaaga ttactatttt ggctacattg tttatcatta aaaccagccc661 ctattgggtc ctgaggaaga ttactatttt ggctacattg tttatcatta aaaccagccc
721 agggatgtgt aaacctgcat ctggagaata agacatttct ttttggttaa atgatattag721 agggatgtgt aaacctgcat ctggagaata agacatttct ttttggttaa atgatattag
781 agaaaaaaaa aactatccaa ggctgctaac aaataatctt cactttcaat tatatccagc781 agaaaaaaaa aactatccaa ggctgctaac aaataatctt cactttcaat tatatccagc
841 aataagttgt tctccagaaa agaaagcttg gaaacttacc cagtttgcct tccatttggg841 aataagttgt tctccagaaa agaaagcttg gaaacttacc cagtttgcct tccatttggg
901 acatgactga tgtgcttcag tctttgtata ataaatgcat cttcgcccct ataaaaaaaa901 acatgactga tgtgcttcag tctttgtata ataaatgcat cttcgcccct ataaaaaaaa
961 aaa961 aaa
人睾丸细胞分化相关蛋白基因cDNA序列MAFSGRARPCIIPENEEIPRAALNTVHEANGTEDERAVSKLQRRHSDVKVYKEFCDFYAKFNMANALASATCERCKGGFAPAETIVNSNGELYHEQCFVCAQCFQQFPEGLFYEERT人睾丸细胞分化相关蛋白基因开放阅读框架氨基酸序列Human testicular cell differentiation-related protein gene cDNA sequence MAFSGRARPCIIPENEEIPRAALNTVHEANGTEDERAVSKLQRRHSDVKVYKEFCDFYAKFNMANALASATCERCKGGFAPAETIVNSNGELYHEQCFVCAQCFQQFPEGLFYEERT Human testicular cell differentiation-related protein gene open reading frame amino acid sequence
本发明的目的是:鉴于人睾丸细胞分化相关蛋白基因是本发明人发现的全新基因,目前人类对此基因的认识和了解仅限于本发明人所做的科学研究工作。由于该基因是与睾丸特异功能相关的基因,而且是胚胎低表达,成人高表达,因此该基因很可能与睾丸内的精子发生有关,其异常表达可能影响男性的生殖功能,因此该基因的研究可用于:①通过制备该基因的融合蛋白,用于研究该基因与睾丸功能的关系,还可能成为一种治疗男性睾丸相关疾病的生物药品。The purpose of the present invention is: in view of the fact that the human testis cell differentiation-related protein gene is a brand-new gene discovered by the inventor, the current human knowledge and understanding of this gene is limited to the scientific research work done by the inventor. Since this gene is a gene related to the specific function of the testis, and its expression is low in embryos and high in adults, it is likely to be related to spermatogenesis in the testis, and its abnormal expression may affect male reproductive function. Therefore, the study of this gene It can be used for: ①Preparing the fusion protein of the gene to study the relationship between the gene and the function of the testis, and may also become a biological drug for treating diseases related to the testis of men.
②制备特异性抗体:基因编码蛋白的特异性抗体是研究基因结构和功能的不可缺少的重要工具,人睾丸细胞分化相关蛋白基因编码蛋白的多克隆和单克隆抗体,可用作免疫组织化学染色、ELISA、免疫电镜、免疫共沉淀等多种根据免疫学原理设计的检测方法,可用于该基因编码蛋白在组织细胞中的定位和定量研究,也可用于各种生物样本(如血液、精液、尿液等)中的含量变化研究以及蛋白质-蛋白质相互作用研究等。因此,该抗体有可能用于制备与人睾丸细胞分化相关蛋白基因表达异常相关疾病诊断试剂盒,并有可能用于制备抗生育药物。② Preparation of specific antibodies: specific antibodies for gene-encoded proteins are an indispensable and important tool for studying gene structure and function. Polyclonal and monoclonal antibodies for proteins encoded by human testicular cell differentiation-related proteins can be used for immunohistochemical staining , ELISA, immunoelectron microscopy, immunoprecipitation and other detection methods designed according to immunological principles can be used for the localization and quantitative research of the protein encoded by the gene in tissue cells, and can also be used for various biological samples (such as blood, semen, research on content changes in urine, etc.) and protein-protein interaction studies, etc. Therefore, the antibody may be used to prepare a diagnostic kit for diseases related to the abnormal expression of human testicular cell differentiation-related protein genes, and may be used to prepare anti-fertility drugs.
③制备基因诊断芯片:将功能基因用于制备基因诊断芯片是基因开发研究的一个重要方面,在疾病诊断(如男性不育、性功能低下)和药物筛选等方面均具有重要意义。本发明技术方案1.人睾丸细胞分化相关蛋白基因融合蛋白的制备③Preparation of genetic diagnostic chips: The use of functional genes in the preparation of genetic diagnostic chips is an important aspect of gene development research, and is of great significance in disease diagnosis (such as male infertility, low sexual function) and drug screening. Technical solution of the present invention 1. Preparation of human testis cell differentiation-related protein gene fusion protein
以人睾丸细胞分化相关蛋白基因开放阅读框的核苷酸序列与质粒pDESTTM15制备成GST-SP2-pDEST15表达质粒,在无NaCl的LB中30℃培养到0.5 OD600,经0.3M NaCl诱导后,超声粉碎后经GST亲和层析柱纯化,得到纯化的融合蛋白。2.人睾丸细胞分化相关蛋白基因编码蛋白特异性多克隆抗体The nucleotide sequence of the open reading frame of the human testis cell differentiation-related protein gene and the plasmid pDEST TM 15 were used to prepare the GST-SP2-pDEST15 expression plasmid, cultured in NaCl-free LB at 30°C to 0.5 OD600, and induced by 0.3M NaCl , purified by GST affinity chromatography column after ultrasonic pulverization to obtain purified fusion protein. 2. Human testis cell differentiation-related protein gene-encoded protein-specific polyclonal antibody
取融合蛋白与载体蛋白KLH(Keyhole Limpet Hymocyanin)结合,经透析后再与完全/不完全佐剂(Complete/Incomplete Freund’sAdjuvant)等量混合,免疫新西兰兔(背部皮下注射),每隔3~4周激发注射一次,共三次,于三个月后取血分离血清。以免疫前动物血清作为对照做ELISA,测定各免疫兔血清中抗体滴度。筛选高滴度血清,进一步用抗原作竞争抑制免疫试验确定抗体的特异性。根据ELISA结果确定其用于免疫组织化学染色的稀释倍增数为1∶200~500。3.人睾丸细胞分化相关蛋白基因编码蛋白特异性单克隆抗体Combine the fusion protein with the carrier protein KLH (Keyhole Limpet Hymocyanin), and then mix it with an equal amount of complete/incomplete adjuvant (Complete/Incomplete Freund's Adjuvant) after dialysis, and immunize New Zealand rabbits (subcutaneous injection in the back), every 3~ Inject once every 4 weeks for a total of three times, and blood was collected three months later to separate serum. ELISA was performed with the animal serum before immunization as a control, and the antibody titer in each immunized rabbit serum was determined. Screen high-titer sera, and further use the antigen as a competitive inhibition immunoassay to determine the specificity of the antibody. According to the results of ELISA, the dilution doublings for immunohistochemical staining were determined to be 1:200-500.3. Human testis cell differentiation-related protein gene-encoded protein-specific monoclonal antibody
取融合蛋白与载体蛋白KLH(Keyhole Limpet Hymocyanin)结合,经透析后再与完全/不完全佐剂(Complete/Incomplete Freund’sAdjuvant)混合,免疫Balb/C小鼠(腹腔内注射),隔周一次,连续2-3次,融合前静脉加强一次,用ELISA方法证实抗体的产生后,取脾脏分离脾细胞,然后与骨髓瘤细胞融合产生杂交瘤细胞。阳性克隆经多次亚克隆,直至获得分泌抗人睾丸细胞分化相关蛋白基因的单克隆杂交瘤细胞株。4.人睾丸细胞分化相关蛋白基因用于制备睾丸功能基因表达芯片Combine the fusion protein with the carrier protein KLH (Keyhole Limpet Hymocyanin), and then mix it with complete/incomplete adjuvant (Complete/Incomplete Freund's Adjuvant) after dialysis, and immunize Balb/C mice (intraperitoneal injection), once every other week , 2-3 times in a row, and the vein was strengthened once before fusion. After confirming the production of antibodies by ELISA method, the spleen was taken to separate spleen cells, and then fused with myeloma cells to produce hybridoma cells. Positive clones were subcloned multiple times until a monoclonal hybridoma cell line secreting genes related to differentiation-related proteins of human testis cells was obtained. 4. Human testis cell differentiation-related protein gene is used to prepare testis functional gene expression chip
(1)以获取的人睾丸细胞分化相关蛋白基因的核苷酸序列设计引物,扩增全长的人睾丸细胞分化相关蛋白基因序列,用作点膜的样品。(2)用英国BioRobotics自动点膜仪将标本点在8×12cm尼龙膜上,每一标本点2个点,每点的DNA量约几ng。;阳性对照8个housekeeping genes(a.ribosomal protein S9;b.Actin gamma;c.glyceraldehyde-3-phosphate dehydrogenase;d.hypoxanthinephosphoribosyltransferase 1;e.H.sapiens mRNA for 23KD highly basicprotein;f.ubiqnitin C;g.Phospholipase A2;h.ubiquitin carboxy Ⅰ-ferminal esterase L Ⅰ)。阴性对照加入噬菌体DNA和P-blue质粒。(3)将含有该基因的芯片用于人睾丸细胞分化相关蛋白基因缺失的诊断和药物筛选33P标记:(1) Design primers with the obtained nucleotide sequence of the human testis cell differentiation-related protein gene to amplify the full-length human testicular cell differentiation-related protein gene sequence, and use it as a sample for spotting the membrane. (2) Use the British BioRobotics automatic film spotting instrument to spot the specimens on an 8×12 cm nylon membrane, 2 spots for each sample, and the amount of DNA in each spot is about a few ng. ; positive control 8 housekeeping genes (a.ribosomal protein S9; b.Actin gamma; c.glyceraldehyde-3-phosphate dehydrogenase; d.hypoxanthinephosphoribosyltransferase 1; eHsapiens mRNA for 23KD highly basicprotein; f.ubiqnitin C; g.Phospholipase A2; h.ubiquitin carboxy Ⅰ-ferminal esterase L Ⅰ). Phage DNA and P-blue plasmid were added as negative controls. (3) The chip containing the gene is used for the diagnosis and drug screening of human testis cell differentiation-related protein gene deletion 33 P marker:
抽提待检标本mRNA或DNA,用Random Primer标记法标记待检标本mRNA或DNA,作为杂交的探针。杂交:Extract the mRNA or DNA of the sample to be tested, and use the Random Primer labeling method to label the mRNA or DNA of the sample to be tested as a probe for hybridization. hybridization:
将点制好的尼龙膜标记探针杂交后,杂交炉(68℃)内烘干,用磷屏压片。信号扫描和分析:After hybridizing the prepared nylon membrane-labeled probes, dry them in a hybridization oven (68° C.), and press them with a phosphor screen. Signal Scanning and Analysis:
用记录仪分析杂交信号。根据杂交信号的强弱分析影响人睾九细胞分化相关蛋白基因蛋白表达水平或人睾丸细胞分化相关蛋白基因的缺失。Hybridization signals were analyzed with a recorder. According to the analysis of the strength of the hybridization signal, it affects the protein expression level of the human testicular cell differentiation-related protein gene protein or the deletion of the human testicular cell differentiation-related protein gene.
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