CN118759189A - Biomarkers for diagnosing lymph node metastasis of cervical cancer and their applications - Google Patents
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Abstract
Description
技术领域Technical Field
本发明属于生物检测技术领域,具体涉及用于诊断宫颈癌淋巴转移的生物标记物及其应用。The present invention belongs to the technical field of biological detection, and in particular relates to a biomarker for diagnosing lymphatic metastasis of cervical cancer and its application.
背景技术Background Art
近年来,癌症已成为全球公共卫生领域的重要挑战之一,每天都有大量新的癌症病例被确诊。其中,宫颈癌是最为常见的妇科恶性肿瘤之一,其发病机制主要与高危型人乳头状瘤病毒(HPV)的感染密切相关。In recent years, cancer has become one of the major challenges in the field of global public health, with a large number of new cancer cases being diagnosed every day. Among them, cervical cancer is one of the most common gynecological malignancies, and its pathogenesis is closely related to the infection of high-risk human papillomavirus (HPV).
宫颈癌患者中,淋巴转移是主要的病理过程之一,对患者的预后具有重要影响。没有淋巴转移的患者5年总生存率超过90%,而存在淋巴结转移的患者则仅约50%。因此,宫颈癌淋巴转移的准确诊断与治疗备受关注。对于淋巴结转移呈阳性的患者,如果未及时给予适当治疗,可能会迅速复发。同时,对于术前需要评估淋巴结转移情况的患者,如果进行了不必要的广泛淋巴结清扫手术,可能会增加不必要的并发症风险。因此,对于早期患者或非手术适应症的患者来说,淋巴转移的检测和准确诊断至关重要。In patients with cervical cancer, lymph node metastasis is one of the main pathological processes and has an important impact on the patient's prognosis. The 5-year overall survival rate of patients without lymph node metastasis is over 90%, while that of patients with lymph node metastasis is only about 50%. Therefore, the accurate diagnosis and treatment of lymph node metastasis in cervical cancer has attracted much attention. For patients with positive lymph node metastasis, if appropriate treatment is not given in time, they may relapse rapidly. At the same time, for patients who need to be evaluated for lymph node metastasis before surgery, if unnecessary extensive lymph node dissection surgery is performed, the risk of unnecessary complications may be increased. Therefore, for early-stage patients or patients with non-surgical indications, the detection and accurate diagnosis of lymph node metastasis is crucial.
目前,评估宫颈癌淋巴转移的方法主要包括经腹/腹腔镜病理取样活检和影像学诊断,例如计算机断层扫描(CT)和磁共振成像(MRI)。然而,部分患者可能对影像学检查的敏感性较低,可能导致淋巴转移被低估,从而影响治疗效果和患者预后。Currently, the methods for evaluating cervical cancer lymph node metastasis mainly include transabdominal/laparoscopic pathological sampling biopsy and imaging diagnosis, such as computed tomography (CT) and magnetic resonance imaging (MRI). However, some patients may have low sensitivity to imaging examinations, which may lead to underestimation of lymph node metastasis, thus affecting the treatment effect and patient prognosis.
生物标志物是指在生物体内存在的具有一定特征和功能的分子、细胞或组织,其能够反映生物体内部的生理状态、病理过程或对治疗的反应。在宫颈癌淋巴转移的预测和诊断中,寻找适用的生物标志物具有重要意义。然而,要找到可靠的生物标志物并不容易。首先,由于宫颈癌的病理过程极其复杂,涉及多种生物学机制的调控,生物标志物的选择需要考虑到这种复杂性。其次,生物标志物必须具有足够的特异性和敏感性,以确保其在淋巴转移的早期阶段就能够被可靠地检测到。此外,生物标志物的检测方法需要具备高度的准确性和可重复性,以保证其在临床应用中的可靠性和有效性。Biomarkers refer to molecules, cells or tissues with certain characteristics and functions that exist in organisms and can reflect the physiological state, pathological process or response to treatment in organisms. In the prediction and diagnosis of cervical cancer lymph node metastasis, it is of great significance to find suitable biomarkers. However, it is not easy to find reliable biomarkers. First, because the pathological process of cervical cancer is extremely complex and involves the regulation of multiple biological mechanisms, the selection of biomarkers needs to take this complexity into account. Secondly, biomarkers must have sufficient specificity and sensitivity to ensure that they can be reliably detected in the early stages of lymph node metastasis. In addition, the detection method of biomarkers needs to have a high degree of accuracy and repeatability to ensure its reliability and effectiveness in clinical applications.
因此,寻找适用于宫颈癌淋巴转移的生物标志物是一项具有挑战性的任务,需要跨学科的合作和大量的实验验证。研究人员需要利用分子生物学、细胞生物学、生物化学等多个领域的技术手段,对候选标志物进行广泛的筛选和鉴定。然后,这些标志物需要在临床样本中进行验证和评估,以确定其在宫颈癌淋巴转移中的确切作用和临床应用前景。Therefore, finding biomarkers for cervical cancer lymph node metastasis is a challenging task that requires interdisciplinary collaboration and extensive experimental validation. Researchers need to use technical means from multiple fields such as molecular biology, cell biology, and biochemistry to extensively screen and identify candidate markers. These markers then need to be validated and evaluated in clinical samples to determine their exact role in cervical cancer lymph node metastasis and their prospects for clinical application.
虽然寻找合适的生物标志物具有一定的困难,但一旦成功找到并验证,将为宫颈癌淋巴转移的早期诊断和个体化治疗带来实质性的进展。因此,尽管面临挑战,但对于改善宫颈癌患者的治疗效果和预后,寻找生物标志物仍然是必需的。Although it is difficult to find a suitable biomarker, once successfully found and verified, it will bring substantial progress to the early diagnosis and personalized treatment of cervical cancer lymph node metastasis. Therefore, despite the challenges, it is still necessary to find biomarkers to improve the treatment effect and prognosis of cervical cancer patients.
发明内容Summary of the invention
为了解决上述技术问题,本发明提供了用于诊断宫颈癌淋巴转移的生物标记物及其应用。In order to solve the above technical problems, the present invention provides biomarkers for diagnosing lymph node metastasis of cervical cancer and applications thereof.
为此,本发明采用以下技术方案:To this end, the present invention adopts the following technical solutions:
第一方面,本发明提供了一种用于诊断宫颈癌淋巴转移的生物标志物,为存在于人体血浆中的宫颈癌淋巴转移标志物;所述宫颈癌淋巴转移标志物为静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的一种或多种标志物的组合。In the first aspect, the present invention provides a biomarker for diagnosing cervical cancer lymph node metastasis, which is a cervical cancer lymph node metastasis marker present in human plasma; the cervical cancer lymph node metastasis marker is a combination of one or more markers of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A.
作为优选,所述宫颈癌淋巴转移标志物为静息巯基氧化酶-1、对氧磷酶1和角蛋白6A共3种标志物的组合。Preferably, the cervical cancer lymph node metastasis marker is a combination of three markers: resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A.
第二方面,本发明提供了一种用于检测如第一方面所述宫颈癌淋巴转移标志物的试剂在制备宫颈癌淋巴转移诊断试剂盒或检测装置中的应用。In a second aspect, the present invention provides a use of a reagent for detecting a cervical cancer lymph node metastasis marker as described in the first aspect in the preparation of a cervical cancer lymph node metastasis diagnosis kit or a detection device.
第三方面,本发明提供了一种用于诊断宫颈癌淋巴转移的试剂盒,包括用于检测第一方面所述宫颈癌淋巴转移标志物的试剂盒。In a third aspect, the present invention provides a kit for diagnosing cervical cancer lymph node metastasis, including a kit for detecting the cervical cancer lymph node metastasis marker described in the first aspect.
作为优选,所述试剂盒为ELISA试剂盒。Preferably, the kit is an ELISA kit.
第四方面,本发明提供了一种如第一方面所述宫颈癌淋巴转移标志物在非疾病诊断或治疗目的的宫颈癌淋巴转移诊断中的应用。In a fourth aspect, the present invention provides a use of the cervical cancer lymph node metastasis marker as described in the first aspect in the diagnosis of cervical cancer lymph node metastasis for purposes other than disease diagnosis or treatment.
第五方面,本发明提供了一种诊断受试者是否存在宫颈癌淋巴转移的方法,其包括检测受试者血浆中静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的任1种的水平,任选地检测静息巯基氧化酶-1、对氧磷酶1和角蛋白6A三者的水平。In a fifth aspect, the present invention provides a method for diagnosing whether a subject has cervical cancer lymph node metastasis, which comprises detecting the level of any one of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A in the subject's plasma, and optionally detecting the levels of all three of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A.
第六方面,本发明提供了预先评估药物是否能够阻止或治疗宫颈癌淋巴转移的方法,其包括使用静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的任1种或任2种或3种作为生物标志物评估该药物的效果,以实现精准医疗的目的。In a sixth aspect, the present invention provides a method for pre-evaluating whether a drug can prevent or treat lymph node metastasis of cervical cancer, which comprises using any one, any two, or any three of resting sulfhydryl oxidase-1, paraoxonase 1, and keratin 6A as biomarkers to evaluate the effect of the drug, so as to achieve the purpose of precision medicine.
第七方面,本发明提供了一种筛选能够阻止或治疗宫颈癌淋巴转移的化合物的方法,其包括使用静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的任1种或任2种或3种作为生物标志物评估化合物的效果。In the seventh aspect, the present invention provides a method for screening compounds that can prevent or treat cervical cancer lymph node metastasis, which comprises using any one, any two or three of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A as biomarkers to evaluate the effect of the compound.
本发明相对于现有技术而言,具有以下有益效果:Compared with the prior art, the present invention has the following beneficial effects:
本发明提供了可用于判别宫颈癌淋巴转移的新型分子标志物,可用于早期发现、诊断和预测宫颈癌淋巴转移,进而实现更加精准的用药。The present invention provides a novel molecular marker that can be used to identify lymph node metastasis of cervical cancer, which can be used for early detection, diagnosis and prediction of lymph node metastasis of cervical cancer, thereby achieving more accurate medication.
本发明提供的用于诊断宫颈癌淋巴转移的生物标志物为静息巯基氧化酶-1,对氧磷酶1,角蛋白6A中的任意1、2或3种的组合,根据其在血浆中的水平与宫颈癌淋巴转移患者的血浆中的水平进行比较,能高精准地诊断宫颈癌淋巴转移。The biomarkers for diagnosing cervical cancer lymph node metastasis provided by the present invention are a combination of any 1, 2 or 3 of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A. By comparing their levels in plasma with the levels in the plasma of patients with cervical cancer lymph node metastasis, cervical cancer lymph node metastasis can be diagnosed with high accuracy.
附图说明BRIEF DESCRIPTION OF THE DRAWINGS
为了更清楚地说明本发明实施例中的技术方案,下面将对实施例描述中所需要使用的附图作简单地介绍,显而易见地,下面描述中的附图仅仅是本发明的一些实施例,对于本领域普通技术人员来讲,在不付出创造性劳动的前提下,还可以根据这些附图获得其他的附图。In order to more clearly illustrate the technical solutions in the embodiments of the present invention, the drawings required for use in the description of the embodiments will be briefly introduced below. Obviously, the drawings described below are only some embodiments of the present invention. For ordinary technicians in this field, other drawings can be obtained based on these drawings without creative work.
图1为实施例中蛋白质组结果的OPLS-DA分析。FIG1 is an OPLS-DA analysis of the proteomic results in the examples.
图2为实施例中代谢组结果的OPLS-DA分析。FIG. 2 is an OPLS-DA analysis of the metabolomics results in the examples.
图3为实施例中差异蛋白火山图。FIG. 3 is a volcano diagram of differential proteins in the examples.
图4为实施例中差异代谢物火山图。FIG. 4 is a volcano plot of differential metabolites in the examples.
图5为实施例中宫颈癌淋巴转移生物标志物ROC分析结果。FIG. 5 is the ROC analysis result of the cervical cancer lymph node metastasis biomarker in the embodiment.
图6为实施例中宫颈癌淋巴转移3个标志物组合模型ROC。FIG. 6 is a ROC diagram of a combined model of three markers for cervical cancer lymph node metastasis in an embodiment.
图7为宫颈癌淋巴转移标志物中三个标志物的ROC曲线分析。FIG. 7 is a ROC curve analysis of three markers of cervical cancer lymph node metastasis.
图8展示了宫颈癌淋巴转移的3个标志物组合模型ROC分析结果。FIG8 shows the ROC analysis results of the three marker combination model for cervical cancer lymph node metastasis.
具体实施方式DETAILED DESCRIPTION
为使本发明的上述目的、特征和优点能够更加明显易懂,下面结合附图对本发明的具体实施方式做详细的说明。在下面的描述中阐述了很多具体细节以便于充分理解本发明。但是本发明能够以很多不同于在此描述的其它方式来实施,本领域技术人员可以在不违背本发明内涵的情况下做类似改进,因此本发明不受下面公开的具体实施例的限制。本发明各个实施例中的技术特征在没有相互冲突的前提下,均可进行相应组合。In order to make the above-mentioned purpose, features and advantages of the present invention more obvious and easy to understand, the specific implementation mode of the present invention is described in detail below in conjunction with the accompanying drawings. In the following description, many specific details are set forth to facilitate a full understanding of the present invention. However, the present invention can be implemented in many other ways different from those described herein, and those skilled in the art can make similar improvements without violating the connotation of the present invention. Therefore, the present invention is not limited to the specific embodiments disclosed below. The technical features in each embodiment of the present invention can be combined accordingly without conflicting with each other.
宫颈癌淋巴转移是宫颈癌常见的转移方式之一。本发明针对这一现象提供了相应的生物标志物,其选自静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的任1、2或3种。Lymphatic metastasis of cervical cancer is one of the common metastasis modes of cervical cancer. The present invention provides a corresponding biomarker for this phenomenon, which is selected from any one, two or three of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A.
需要说明的是,本发明中静息巯基氧化酶-1、对氧磷酶1和角蛋白6A均为人体内的已知蛋白质。其可以通过公共蛋白数据库查询,例如在uniprot中的蛋白质ID如下表1所示。It should be noted that, in the present invention, resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A are all known proteins in the human body, which can be queried through public protein databases, for example, the protein IDs in uniprot are shown in Table 1 below.
静息巯基氧化酶-1(QSOX1)在蛋白数据库uniprot中的登录号为O00391,是一种催化氧化还原反应的酶,在细胞内部和外部环境中起着重要作用。它能够催化自由巯基(即含有硫氢基的基团)的氧化反应,形成二硫键。这个过程有助于细胞内蛋白质的折叠和形成,并在细胞外部环境中调节基质的形成和稳定。QSOX1在细胞内氧化还原平衡中发挥关键作用,同时也与一些疾病,特别是癌症的发生和发展密切相关。Quiescent sulfhydryl oxidase-1 (QSOX1), with accession number O00391 in the protein database uniprot, is an enzyme that catalyzes redox reactions and plays an important role in the cell's internal and external environment. It can catalyze the oxidation of free sulfhydryl groups (i.e., groups containing sulfhydryl groups) to form disulfide bonds. This process helps fold and form proteins within cells and regulates the formation and stability of the matrix in the cell's external environment. QSOX1 plays a key role in intracellular redox balance and is also closely related to the occurrence and development of some diseases, especially cancer.
对氧磷酶1(Paraoxonase-1,PON1)在蛋白数据库uniprot中的登录号为P27169,是一种抗氧化酶,在维持体内氧化-抗氧化平衡中起关键作用。已经发现,PON1与全身氧化应激和心血管事件相关,但鲜有报道其与宫颈癌的淋巴转移相关或者单独可以作为宫颈癌的淋巴转移的生物标志物。Paraoxonase-1 (PON1), whose accession number in the protein database uniprot is P27169, is an antioxidant enzyme that plays a key role in maintaining the oxidation-antioxidation balance in the body. It has been found that PON1 is associated with systemic oxidative stress and cardiovascular events, but there are few reports that it is associated with lymphatic metastasis of cervical cancer or can be used alone as a biomarker for lymphatic metastasis of cervical cancer.
角蛋白6A(KRT 6A)在蛋白数据库uniprot中的登录号为P0253,是一种角蛋白家族成员,属于细胞骨架蛋白质,主要存在于皮肤、毛发、指甲等角质化组织中,起到维持细胞形态结构和机械支撑的作用。Keratin 6A在表皮中表达较高,其主要功能是提供细胞的结构支持,保护细胞免受外部环境的损害,同时也参与调节角质细胞的增殖和分化过程。在某些疾病如皮肤病和癌症中,Keratin 6A的表达水平可能发生变化,与疾病的发生和发展相关。Keratin 6A (KRT 6A) has the accession number P0253 in the protein database uniprot. It is a member of the keratin family and a cytoskeletal protein. It is mainly found in keratinized tissues such as skin, hair, and nails, and plays a role in maintaining cell morphology and mechanical support. Keratin 6A is highly expressed in the epidermis. Its main function is to provide structural support for cells and protect cells from damage by the external environment. It also participates in regulating the proliferation and differentiation of keratinocytes. In certain diseases such as skin diseases and cancers, the expression level of Keratin 6A may change, which is related to the occurrence and development of the disease.
表1蛋白质的ID与中英文名称Table 1 Protein IDs and Chinese and English names
需要说明的是,上述提及的宫颈癌淋巴转移标志物中,单独使用其中的任意一种标志物都可以作为诊断宫颈癌淋巴转移的依据。然而,由于单一标志物可能存在一定的误判可能性,为了提高诊断的准确性和可靠性,更为优选的方案是将这三种标志物组合起来作为宫颈癌淋巴转移的标志物。It should be noted that any one of the above-mentioned cervical cancer lymph node metastasis markers can be used alone as a basis for diagnosing cervical cancer lymph node metastasis. However, since a single marker may have a certain possibility of misdiagnosis, in order to improve the accuracy and reliability of diagnosis, a more preferred solution is to combine these three markers as markers for cervical cancer lymph node metastasis.
通过将静息巯基氧化酶-1、对氧磷酶1和角蛋白6A这三种标志物进行组合,可以提高对宫颈癌淋巴转移的敏感性和特异性。这种组合策略有助于减少误判可能性,并提高对宫颈癌淋巴转移的准确诊断率,为患者的治疗和管理提供更可靠的依据。By combining the three markers of resting sulfhydryl oxidase-1, paraoxonase 1, and keratin 6A, the sensitivity and specificity of cervical cancer lymph node metastasis can be improved. This combination strategy helps to reduce the possibility of misdiagnosis and improve the accurate diagnosis rate of cervical cancer lymph node metastasis, providing a more reliable basis for the treatment and management of patients.
因此,尽管单一标志物也具有一定的诊断价值,但仍然优先考虑采用三种标志物的组合作为宫颈癌淋巴转移的诊断依据,以确保诊断结果的准确性和可靠性。Therefore, although a single marker also has certain diagnostic value, it is still preferred to use a combination of three markers as the basis for the diagnosis of cervical cancer lymph node metastasis to ensure the accuracy and reliability of the diagnostic results.
在本发明的另一实施例中,提供了一种用于检测上述宫颈癌淋巴转移标志物(单一标志物或多种标志物的组合)的试剂在制备用于诊断宫颈癌淋巴转移的试剂盒或检测装置中的应用。In another embodiment of the present invention, there is provided a use of a reagent for detecting the above-mentioned cervical cancer lymph node metastasis marker (a single marker or a combination of multiple markers) in the preparation of a kit or a detection device for diagnosing cervical cancer lymph node metastasis.
由于上述宫颈癌淋巴转移标志物可能是单一标志物,也可能是多种标志物的组合,因此对应的诊断试剂盒或检测装置也可以呈现出多种形式。示例性地,可以是针对单一标志物的诊断试剂盒或检测装置,即专门用于检测静息巯基氧化酶-1、对氧磷酶1或角蛋白6A中的任何一种的试剂盒或检测装置。进一步示例性地,也可以是包含多种标志物各自的诊断试剂盒或检测装置的组合,即同时检测静息巯基氧化酶-1、对氧磷酶1和角蛋白6A的试剂盒或检测装置。Since the above-mentioned cervical cancer lymph node metastasis marker may be a single marker or a combination of multiple markers, the corresponding diagnostic kit or detection device may also be in various forms. Exemplarily, it may be a diagnostic kit or detection device for a single marker, that is, a kit or detection device specifically used to detect any one of resting sulfhydryl oxidase-1, paraoxonase 1 or keratin 6A. Further exemplarily, it may also be a combination of diagnostic kits or detection devices containing multiple markers, that is, a kit or detection device for simultaneously detecting resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A.
这种多样性的设计使得诊断试剂盒或检测装置具有更大的适用范围和灵活性,可以根据具体的临床需求和诊断要求来选择合适的检测方案。但是,无论是单一标志物的诊断试剂盒还是多种标志物的组合,预期均能够提供相对可靠和准确的诊断结果。This diverse design allows diagnostic kits or detection devices to have a wider range of applications and flexibility, and appropriate detection schemes can be selected according to specific clinical needs and diagnostic requirements. However, whether it is a diagnostic kit for a single marker or a combination of multiple markers, it is expected to provide relatively reliable and accurate diagnostic results.
本发明中具体的试剂盒内所包含的试剂可以根据每一种标志物的检测手段进行设定。这意味着针对静息巯基氧化酶-1、对氧磷酶1和角蛋白6A这三种标志物,可以选择适合其检测的特定方法和试剂。The reagents contained in the specific kit of the present invention can be set according to the detection method of each marker. This means that for the three markers of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A, specific methods and reagents suitable for their detection can be selected.
由于这三种标志物都属于已知物质,现有技术中已经存在着广泛的、可靠的检测方法。例如,可以利用免疫学方法,如酶联免疫吸附测定(ELISA)、免疫荧光分析等,来检测这些标志物的含量。也可以采用分子生物学技术,如聚合酶链式反应(PCR)、原位杂交等,来检测这些标志物的基因表达水平。另外,也可以采用质谱分析等手段进行。Since these three markers are all known substances, there are already extensive and reliable detection methods in the prior art. For example, immunological methods, such as enzyme-linked immunosorbent assay (ELISA), immunofluorescence analysis, etc., can be used to detect the content of these markers. Molecular biological techniques, such as polymerase chain reaction (PCR), in situ hybridization, etc., can also be used to detect the gene expression level of these markers. In addition, mass spectrometry and other means can also be used.
基于现有技术的丰富经验和成熟方法,可以参照已有的检测手段和试剂,选择最适合的方法来检测上述标志物(单一标志物或多种标志物的组合)。然后,根据所选定的检测方法,可以按照现有技术的标准和流程设计相应的诊断试剂盒或检测装置。Based on the rich experience and mature methods of the prior art, the most suitable method can be selected to detect the above markers (single marker or a combination of multiple markers) with reference to the existing detection means and reagents. Then, according to the selected detection method, the corresponding diagnostic kit or detection device can be designed according to the standards and processes of the prior art.
ELISA是一种常用的生物标志物检测方法,其是利用特定抗体与待检测的生物标志物结合,再通过酶的反应产生可测量的信号。ELISA方法具有高度灵敏度和特异性,可以应用于单一标志物或多种标志物的检测。ELISA is a commonly used biomarker detection method that uses specific antibodies to bind to the biomarker to be detected, and then produces a measurable signal through an enzyme reaction. The ELISA method has high sensitivity and specificity and can be applied to the detection of a single marker or multiple markers.
免疫荧光分析是利用荧光标记的抗体与待检测的生物标志物结合,并通过荧光显微镜或荧光光度计来检测荧光信号的强度,从而定量分析生物标志物的存在量。Immunofluorescence analysis uses fluorescently labeled antibodies to bind to the biomarker to be detected, and detects the intensity of the fluorescent signal through a fluorescence microscope or a fluorescence photometer to quantitatively analyze the presence of the biomarker.
质谱分析可以对生物标志物进行准确的定量分析,包括质子核磁共振(NMR)和质谱质谱(MS)等方法,其能够提供非常精确的分子结构和相对含量信息。Mass spectrometry can accurately quantify biomarkers, including methods such as proton nuclear magnetic resonance (NMR) and mass spectrometry (MS), which can provide very precise molecular structure and relative content information.
PCR技术可用于检测生物标志物的转录RNA。通过PCR扩增待检测的RNA或其片段,再通过凝胶电泳或实时荧光定量PCR等方法进行定量分析。PCR technology can be used to detect the transcribed RNA of biomarkers. The RNA or its fragments to be detected are amplified by PCR, and then quantitatively analyzed by gel electrophoresis or real-time fluorescence quantitative PCR.
蛋白质芯片技术可以同时检测多个生物标志物,通过将多种抗体固定在芯片表面,然后与待检测样品(例如血浆)中的蛋白质结合,最终通过荧光或放射性标记的信号来检测生物标志物。Protein chip technology can detect multiple biomarkers simultaneously by fixing multiple antibodies on the chip surface, which are then bound to proteins in the sample to be tested (such as plasma), and finally the biomarkers are detected through fluorescent or radioactive labeled signals.
示例性地,考虑到检测效率和方便性,该试剂盒可以为ELISA试剂盒。Exemplarily, considering detection efficiency and convenience, the kit may be an ELISA kit.
在本发明的另一实施例中,提供了一种上述生物标志物(单一标志物或多种标志物的组合)在非疾病诊断或治疗目的的宫颈癌淋巴转移诊断中的应用。非疾病诊断或治疗目的宫颈癌淋巴转移诊断可以是用于科学研究、非医疗的商业性检测或测试等目的。In another embodiment of the present invention, there is provided an application of the above biomarker (single marker or a combination of multiple markers) in the diagnosis of cervical cancer lymph node metastasis for non-disease diagnosis or treatment purposes. The diagnosis of cervical cancer lymph node metastasis for non-disease diagnosis or treatment purposes can be used for scientific research, non-medical commercial detection or testing, etc.
例如,宫颈癌淋巴转移的生物标志物可以用于研究疾病发生机制、病理生理过程以及潜在的治疗靶点。通过分析这些标志物在疾病进程中的变化,可以深入了解该疾病的发展和转移机制,为疾病的预防和治疗提供更深入的理解。For example, biomarkers of cervical cancer lymph node metastasis can be used to study the disease mechanism, pathophysiological process and potential therapeutic targets. By analyzing the changes in these markers during the course of the disease, we can gain a deeper understanding of the development and metastasis mechanism of the disease and provide a deeper understanding for the prevention and treatment of the disease.
生物标志物在药物研发过程中也具有重要作用。它们可以作为药效评估的指标,帮助研究人员评估新药物的安全性和有效性。通过监测药物对生物标志物的影响,可以及早发现潜在的药物毒性和不良反应,并指导药物剂量的调整和优化。Biomarkers also play an important role in the drug development process. They can be used as indicators for drug efficacy evaluation to help researchers evaluate the safety and effectiveness of new drugs. By monitoring the effects of drugs on biomarkers, potential drug toxicity and adverse reactions can be detected early, and the adjustment and optimization of drug dosage can be guided.
生物标志物也可以用于个体健康管理和预防医学中。通过定期监测特定的生物标志物,可以及时发现个体健康状况的变化,预测疾病的风险,并采取相应的健康管理措施,例如调整生活方式、饮食习惯或药物治疗,以维护健康和延缓疾病进展。Biomarkers can also be used in individual health management and preventive medicine. By regularly monitoring specific biomarkers, changes in individual health status can be detected in a timely manner, the risk of disease can be predicted, and appropriate health management measures can be taken, such as adjusting lifestyle, dietary habits or drug treatment, to maintain health and delay disease progression.
生物标志物可以用于评估生活方式对健康的影响。通过监测这些标志物的变化,可以评估不同生活方式对健康的影响程度,并指导个体采取合适的生活方式干预措施,例如减肥、戒烟、增加运动量等,从而改善健康状况和降低疾病风险。Biomarkers can be used to assess the impact of lifestyle on health. By monitoring changes in these markers, the impact of different lifestyles on health can be assessed, and individuals can be guided to take appropriate lifestyle intervention measures, such as losing weight, quitting smoking, increasing exercise, etc., to improve health and reduce disease risks.
本发明还提供了一种诊断受试者是否存在宫颈癌淋巴转移的方法。该方法的关键在于检测受试者血浆中静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的任意一种的水平,或者任选地检测这三种标志物中的任意组合。The present invention also provides a method for diagnosing whether a subject has cervical cancer lymph node metastasis. The key to the method is to detect the level of any one of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A in the subject's plasma, or optionally detect any combination of these three markers.
首先,本方法的实施涉及到样本的采集与处理。从受试者的静脉血中提取血浆样本,这一过程需要遵循严格的标准操作程序,以确保样本的质量和完整性。First, the implementation of this method involves the collection and processing of samples. Plasma samples are extracted from the subject's venous blood, and this process needs to follow strict standard operating procedures to ensure the quality and integrity of the samples.
其次,对于已经获得的血浆样本,可以选择使用适当的技术和试剂来检测其中的静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的任意一种的水平。这些检测方法可以是免疫学技术,如ELISA、免疫荧光分析等,也可以是分子生物学技术,如PCR、原位杂交等,也可以采用质谱手段等。通过这些方法,可以准确地定量受试者血浆中某种标志物的含量水平。Secondly, for the plasma samples that have been obtained, appropriate techniques and reagents can be used to detect the level of any one of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A. These detection methods can be immunological techniques, such as ELISA, immunofluorescence analysis, etc., or molecular biological techniques, such as PCR, in situ hybridization, etc., or mass spectrometry, etc. Through these methods, the content level of a certain marker in the subject's plasma can be accurately quantified.
同时,本方法还提供了另一种选择,即,任选地,检测静息巯基氧化酶-1、对氧磷酶1和角蛋白6A这三种标志物中的任意组合。这种组合的选择可以根据实际需要和临床情况来确定,例如可以同时检测这三种标志物的含量,或者根据先前的研究或临床经验选择其中的一种或多种组合。At the same time, the method also provides another option, that is, optionally, detecting any combination of the three markers of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A. The selection of this combination can be determined according to actual needs and clinical conditions, for example, the contents of these three markers can be detected simultaneously, or one or more combinations thereof can be selected based on previous research or clinical experience.
在获得了标志物的检测结果后,需要将其与未淋巴转移患者中的相关数据进行比较和分析。根据这些比较结果,可以判断受试者是否存在宫颈癌淋巴转移的风险。如果某种标志物或标志物组合的水平明显低于正常范围,那么可以推断受试者存在宫颈癌淋巴转移的可能性较高。After obtaining the test results of the markers, it is necessary to compare and analyze them with the relevant data of patients without lymph node metastasis. Based on these comparison results, it can be determined whether the subject is at risk of cervical cancer lymph node metastasis. If the level of a certain marker or a combination of markers is significantly lower than the normal range, it can be inferred that the subject is more likely to have cervical cancer lymph node metastasis.
本方法的可靠性和准确性取决于所选择的检测方法的灵敏度和特异性,以及参考范围或阈值的确定。因此,在实施该方法时,需要严格控制实验条件,并结合临床实践经验和数据分析,进行结果的解释和诊断。此外,对于任意一种标志物的检测结果,都应当进行谨慎的评估和解释,以避免由于单一标志物可能存在的误判可能性而导致诊断结果的不确定性。The reliability and accuracy of this method depends on the sensitivity and specificity of the selected detection method, as well as the determination of the reference range or threshold. Therefore, when implementing this method, it is necessary to strictly control the experimental conditions and combine clinical practice experience and data analysis to interpret and diagnose the results. In addition, the test results of any marker should be carefully evaluated and interpreted to avoid uncertainty in the diagnostic results due to the possibility of misdiagnosis of a single marker.
优选地,设定每一个标志物的指标值,其为该标志物在受试者人体血浆中的水平值与在没有发生宫颈癌淋巴转移的患者血浆中的水平值之间的比值,每一个标志物的风险范围示例性如下:静息巯基氧化酶-1对应的提示宫颈癌淋巴转移的所述风险范围为指标值小于0.59;对氧磷酶1对应的提示宫颈癌淋巴转移的所述风险范围为指标值小于0.56;角蛋白6A对应的提示宫颈癌淋巴转移的所述风险范围为指标值小于0.24。结果发现,选取的10例宫颈癌淋巴转移患者全部落入风险范围,表明本发明的三种生物标志物的组合相对单一生物标志物而言,具有更优的准确性。Preferably, the index value of each marker is set, which is the ratio between the level of the marker in the human plasma of the subject and the level in the plasma of the patient without cervical cancer lymph node metastasis. The risk range of each marker is exemplified as follows: the risk range corresponding to resting sulfhydryl oxidase-1 indicating cervical cancer lymph node metastasis is an index value less than 0.59; the risk range corresponding to paraoxonase 1 indicating cervical cancer lymph node metastasis is an index value less than 0.56; the risk range corresponding to keratin 6A indicating cervical cancer lymph node metastasis is an index value less than 0.24. It was found that all 10 selected patients with cervical cancer lymph node metastasis fell into the risk range, indicating that the combination of the three biomarkers of the present invention has better accuracy than a single biomarker.
本发明提供了预先评估药物是否能够阻止或治疗宫颈癌淋巴转移的方法,其包括使用静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的任1种或任2种或3种作为生物标志物评估该药物的效果,以实现精准医疗的目的。The present invention provides a method for pre-evaluating whether a drug can prevent or treat cervical cancer lymph node metastasis, which comprises using any one, any two, or any three of resting sulfhydryl oxidase-1, paraoxonase 1, and keratin 6A as biomarkers to evaluate the effect of the drug, so as to achieve the purpose of precision medicine.
本方法的实施需要从实验设计和样本采集开始。在研究或临床试验的设计阶段,需要明确所要评估的药物、治疗方案以及评估指标。同时,需要确定受试者的选择标准,并采集相应的生物样本,如血浆、组织或细胞样本,以备后续的实验分析。The implementation of this method needs to start with experimental design and sample collection. In the design stage of a study or clinical trial, it is necessary to clarify the drugs to be evaluated, the treatment regimen, and the evaluation indicators. At the same time, it is necessary to determine the selection criteria for the subjects and collect the corresponding biological samples, such as plasma, tissue or cell samples, for subsequent experimental analysis.
针对所选择的药物或治疗方案,可以选择使用静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的任意一种或任意两种或全部三种作为生物标志物来评估其治疗效果。这些标志物的选择可以根据先前的研究或临床经验来确定,也可以根据药物的作用机制和预期效果来进行推断。For the selected drug or treatment regimen, any one, any two, or all three of resting sulfhydryl oxidase-1, paraoxonase 1, and keratin 6A can be selected as biomarkers to evaluate its therapeutic effect. The selection of these markers can be determined based on previous studies or clinical experience, or can be inferred based on the mechanism of action and expected effect of the drug.
在获得了生物样本后,可以使用适当的技术和试剂来检测所选择的标志物的水平。这些检测方法可以是免疫学技术,如ELISA、免疫荧光分析等,也可以是分子生物学技术,如PCR、原位杂交等,也可以是质谱分析。通过这些方法,可以准确地定量受试者生物样本中标志物的含量水平。After obtaining the biological sample, appropriate techniques and reagents can be used to detect the level of the selected marker. These detection methods can be immunological techniques, such as ELISA, immunofluorescence analysis, etc., or molecular biology techniques, such as PCR, in situ hybridization, etc., or mass spectrometry. Through these methods, the content level of the marker in the subject's biological sample can be accurately quantified.
接下来,需要将药物或治疗方案施加于受试者,并按照预定的方案进行治疗。在治疗过程中,需要定期监测受试者的生物样本,并重复检测所选择的标志物的水平。这样可以及时了解药物的治疗效果,以及是否达到了预期的治疗目标。Next, the drug or treatment regimen needs to be applied to the subject and the treatment is carried out according to the predetermined regimen. During the treatment process, the subject's biological samples need to be monitored regularly and the levels of the selected markers need to be repeatedly tested. This allows timely understanding of the therapeutic effect of the drug and whether the desired treatment goal has been achieved.
最后,根据所获得的检测结果,可以对药物的治疗效果进行评估和判定。如果所选择的标志物的水平发生了显著的变化,与治疗前相比较有明显的差异,那么可以推断该药物可能具有阻止或治疗宫颈癌淋巴转移的潜力。相反,如果标志物的水平变化不明显或未达到预期的效果,那么可能需要重新评估治疗方案或尝试其他治疗策略。Finally, based on the test results obtained, the therapeutic effect of the drug can be evaluated and determined. If the level of the selected marker has changed significantly and is significantly different from before treatment, it can be inferred that the drug may have the potential to prevent or treat cervical cancer lymph node metastasis. On the contrary, if the level of the marker does not change significantly or does not achieve the expected effect, it may be necessary to re-evaluate the treatment plan or try other treatment strategies.
本发明提供了一种筛选能够阻止或治疗宫颈癌淋巴转移的化合物的方法,其包括使用静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的任1种或任2种或3种作为生物标志物评估化合物的效果。The present invention provides a method for screening compounds capable of preventing or treating lymphatic metastasis of cervical cancer, which comprises using any one, any two or three of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A as biomarkers to evaluate the effect of the compound.
首先,本方法的实施需要建立合适的实验体系和模型。可以利用宫颈癌淋巴转移的细胞系或动物模型来模拟宫颈癌淋巴转移的生理过程,并评估化合物对其的影响。First, the implementation of this method requires the establishment of a suitable experimental system and model. Cell lines or animal models of cervical cancer lymphatic metastasis can be used to simulate the physiological process of cervical cancer lymphatic metastasis and evaluate the effects of compounds on it.
其次,选择合适的生物标志物用于评估化合物的效果。静息巯基氧化酶-1、对氧磷酶1和角蛋白6A这三种标志物作为生物标志物,可以反映宫颈癌淋巴转移的生物学过程和病理状态。因此,可以将它们作为筛选化合物的效果的生物标志物,以评估化合物对宫颈癌淋巴转移的干预效果。Secondly, select appropriate biomarkers to evaluate the effect of the compound. The three markers of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A as biomarkers can reflect the biological process and pathological state of cervical cancer lymphatic metastasis. Therefore, they can be used as biomarkers to screen the effect of compounds to evaluate the intervention effect of compounds on cervical cancer lymphatic metastasis.
接下来,进行化合物的筛选实验。将待筛选的化合物加入到细胞或动物体内,观察其对静息巯基氧化酶-1、对氧磷酶1和角蛋白6A的影响。可以使用适当的技术和试剂来检测这些标志物的水平,如免疫学技术和分子生物学技术等。根据检测结果,可以初步评估化合物对宫颈癌淋巴转移的潜在治疗效果。Next, a compound screening experiment is performed. The compounds to be screened are added to cells or animals to observe their effects on resting sulfhydryl oxidase-1, paraoxonase 1, and keratin 6A. Appropriate techniques and reagents can be used to detect the levels of these markers, such as immunological techniques and molecular biological techniques. Based on the test results, the potential therapeutic effect of the compound on cervical cancer lymph node metastasis can be preliminarily evaluated.
在获得初步筛选结果后,可以进行进一步的验证和确认实验。通过使用更为精细和严格的实验设计和操作流程,可以验证化合物对标志物水平的影响,并进一步评估其对宫颈癌淋巴转移的治疗效果。After obtaining the preliminary screening results, further verification and confirmation experiments can be carried out. By using more sophisticated and rigorous experimental designs and operating procedures, the effects of compounds on marker levels can be verified and their therapeutic effects on cervical cancer lymph node metastasis can be further evaluated.
最后,根据实验结果,对具有潜在疗效的化合物进行进一步的研究和开发。可以进一步评估其药理学性质、毒副作用、药代动力学等药物属性,并进行临床前研究和临床试验。Finally, based on the experimental results, further research and development of compounds with potential therapeutic effects can be carried out. Their pharmacological properties, toxicity, pharmacokinetics and other drug properties can be further evaluated, and preclinical studies and clinical trials can be carried out.
下面本发明通过一个具体实施例来进一步展示上述生物标志物的选择原理、过程以及效果,以便于本领域技术人员理解本发明的实质。The present invention further demonstrates the selection principle, process and effect of the above-mentioned biomarkers through a specific example below, so that those skilled in the art can understand the essence of the present invention.
若未特别指明,实施例中所用的技术手段为本领域技术人员所熟知的常规手段,本发明中所用试剂均为分析纯或以上规格,其中所用的色谱柱,型号:Acclaim Pep Map100C18 column,厂家:Thermo;液相色谱仪,型号:EASY-nLC 1200,厂家:Thermo。Unless otherwise specified, the technical means used in the examples are conventional means well known to those skilled in the art. The reagents used in the present invention are all analytical grade or above. The chromatographic column used is model: Acclaim Pep Map100C18 column, manufacturer: Thermo; the liquid chromatograph is model: EASY-nLC 1200, manufacturer: Thermo.
实施例1:生物标志物的选择Example 1: Selection of biomarkers
血浆样本来自40名参与者。这40名参与者包括宫颈癌淋巴无转移患者25例,宫颈癌淋巴转移患者15例。采集肘静脉血于EDTA抗凝管,轻轻上下颠倒混匀,在4℃下,1600g离心10min,离心后收集上清液,上清液转至1.5ml离心管,在4℃下,13000g离心2min,收集上清分装到多个离心管中,收集好的的血浆标记后,立即转移到-80℃避光保存,避免反复冻融。Plasma samples were obtained from 40 participants. These 40 participants included 25 patients with cervical cancer without lymph node metastasis and 15 patients with cervical cancer with lymph node metastasis. Blood was collected from the elbow vein in EDTA anticoagulation tubes, gently inverted to mix, centrifuged at 1600g for 10 min at 4°C, and the supernatant was collected after centrifugation. The supernatant was transferred to a 1.5 ml centrifuge tube and centrifuged at 13000g for 2 min at 4°C. The supernatant was collected and divided into multiple centrifuge tubes. After the collected plasma was marked, it was immediately transferred to -80°C and stored in the dark to avoid repeated freezing and thawing.
本实施例所用的试剂:甲酸,甲醇,甲酸铵,碳酸氢铵,乙腈,二硫苏糖醇(DTT),碘乙酰胺(IAM)。The reagents used in this example are: formic acid, methanol, ammonium formate, ammonium bicarbonate, acetonitrile, dithiothreitol (DTT), and iodoacetamide (IAM).
一、针对蛋白质标志物1. Targeting protein markers
对血浆样本进行去高丰度蛋白操作,测定样品蛋白浓度后,对100μg蛋白的血液样本进行纯化,而后对纯化后的样本进行还原烷基化反应。具体操作步骤如下:高丰度蛋白去除,蛋白纯化,富集质控,蛋白酶解。所得肽段随后在ZipTip Pipette Tips(Merck,德国)上脱盐,并在真空离心下干燥,并储存在-80℃直至检测。Plasma samples were subjected to high-abundance protein removal. After the sample protein concentration was determined, 100 μg of blood samples were purified, and then the purified samples were subjected to reductive alkylation. The specific operation steps are as follows: high-abundance protein removal, protein purification, enrichment quality control, and proteolysis. The resulting peptides were then desalted on ZipTip Pipette Tips (Merck, Germany), dried under vacuum centrifugation, and stored at -80°C until detection.
用纳升级超高效液相色谱EASY-nLC 1200(Thermo Fisher,USA)联用高分辨质谱仪Orbitrap Exploris 480(Thermo Fisher,USA)进行蛋白质组学分析。色谱柱为AcclaimPep Map 100C18 column(75μm内径,2μm柱料粒径,约25cm柱长)。以300nL/min流速通过如下有效梯度进行分离:0-1.0分钟,3%-35%溶液B(98%乙腈,0.1%甲酸);1-56分钟,35%-95%溶液B;56-59分钟,95%溶液B;59-65分钟,95%-3%溶液B,色谱柱温度保持在40℃,样品管理器温度设置为4℃。纳升液相分离末端直接连接质谱仪并按如下参数进行检测,经过液相分离的肽段通过nano ESI源离子化后进入到串联质谱仪Orbitrap Exploris 480(Thermo Fisher,USA)进行DDA(Data Dependent Acquisition)模式检测。Proteomic analysis was performed using a nano-level ultra-high performance liquid chromatography EASY-nLC 1200 (Thermo Fisher, USA) coupled to a high-resolution mass spectrometer Orbitrap Exploris 480 (Thermo Fisher, USA). The chromatographic column was an AcclaimPep Map 100C18 column (75 μm inner diameter, 2 μm column particle size, approximately 25 cm column length). Separation was performed at a flow rate of 300 nL/min using the following effective gradient: 0-1.0 min, 3%-35% solution B (98% acetonitrile, 0.1% formic acid); 1-56 min, 35%-95% solution B; 56-59 min, 95% solution B; 59-65 min, 95%-3% solution B. The column temperature was maintained at 40°C, and the sample manager temperature was set to 4°C. The end of the nanoliter liquid phase separation was directly connected to a mass spectrometer and detected according to the following parameters. The peptides separated by the liquid phase were ionized by a nano ESI source and then entered into a tandem mass spectrometer Orbitrap Exploris 480 (Thermo Fisher, USA) for DDA (Data Dependent Acquisition) mode detection.
二、针对代谢物标志物2. Targeting metabolite markers
首先是代谢物提取:将血浆样本在4℃条件下缓慢解冻后,取100μL置于1.5ml EP管中,加入300μL提取液(甲醇:乙腈=2:1,v:v,-20℃预冷)、10μL内标1和10μL内标2,涡旋混匀1min,-20℃静置30min后,4℃,16000g离心30min。离心后取300μL上清,置于冷冻真空浓缩仪抽干后,加入150μL复溶液(甲醇:水=1:1,v:v)进行复溶,涡旋震荡,14000g,4℃离心15min,取上清置于进样瓶中。每个样本的上清液各取15μL混合成QC质控样本,用于评估LC-MS分析过程的重复性和稳定性。First, metabolite extraction: After slowly thawing the plasma sample at 4°C, take 100μL and place it in a 1.5ml EP tube, add 300μL of extraction solution (methanol:acetonitrile = 2:1, v:v, -20°C pre-cooling), 10μL of internal standard 1 and 10μL of internal standard 2, vortex mix for 1min, let stand at -20°C for 30min, and centrifuge at 4°C, 16000g for 30min. After centrifugation, take 300μL of supernatant, place it in a freeze vacuum concentrator to dry, add 150μL of reconstitution solution (methanol: water = 1:1, v:v) for reconstitution, vortex shake, 14000g, 4°C centrifuge for 15min, take the supernatant and place it in the injection bottle. Take 15μL of the supernatant of each sample and mix it into a QC quality control sample to evaluate the repeatability and stability of the LC-MS analysis process.
之后使用Vanquish超高效液相色谱UPLC(Thermo Fisher,USA)联用高分辨质谱仪Orbitrap Exploris 480(Thermo Fisher,USA)来进行代谢物的分离和检测。Then, Vanquish ultra-performance liquid chromatography (UPLC) (Thermo Fisher, USA) was combined with a high-resolution mass spectrometer (Orbitrap Exploris 480, Thermo Fisher, USA) to separate and detect metabolites.
三、生信分析寻找标志物3. Bioinformatics analysis to find markers
主要通过差异筛选、随机森林、ROC分析等生信分析方法,来得到生物标志物。筛选差异的标准主要是差异倍数(Fold change)≥1.2或≤0.83,P值<0.05。然后对差异蛋白和代谢物进行ROC曲线分析,再结合随机森林排序,综合结果,选出最终的生物标志物。根据上述生信分析,筛选出3个标志物作为宫颈癌淋巴转移标志物,它们是静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中的一种或多种组合,且三种标志物均属于蛋白。Biomarkers are mainly obtained through bioinformatics analysis methods such as differential screening, random forest, and ROC analysis. The criteria for screening differences are mainly fold change ≥ 1.2 or ≤ 0.83, and P value < 0.05. Then ROC curve analysis is performed on the differential proteins and metabolites, combined with random forest sorting, and the final biomarkers are selected based on the comprehensive results. According to the above bioinformatics analysis, three markers were screened as markers of cervical cancer lymph node metastasis, which are one or more combinations of resting sulfhydryl oxidase-1, paraoxonase 1, and keratin 6A, and all three markers are proteins.
图1和图2分别展示了本实施例中蛋白质组与代谢组的OPLS-DA结果,图中Non-Met代表宫颈癌无转移组,Met-Lymph代表宫颈癌淋巴转移组。OPLS-DA分析图反映了各组样本的整体分布情况。Figures 1 and 2 show the OPLS-DA results of the proteome and metabolome in this example, respectively. In the figure, Non-Met represents the cervical cancer non-metastasis group, and Met-Lymph represents the cervical cancer lymph node metastasis group. The OPLS-DA analysis diagram reflects the overall distribution of samples in each group.
图3为宫颈癌无转移组和宫颈癌淋巴转移组的差异蛋白火山图,利用火山图显示了宫颈癌淋巴转移组的差异蛋白的结果。其中,共筛选到58种蛋白质,在宫颈癌淋巴转移患者中的无复发转移相比有显著差异。在这些蛋白质中,31个是下调的,27个是上调的。图4为宫颈癌无转移组和宫颈癌淋巴转移组的差异代谢火山图,利用火山图显示了宫颈癌淋巴转移组的差异代谢物的结果。其中,共筛选到288个代谢物在宫颈癌淋巴转移患者和无复发转移相比有显著差异。在这些代谢物中,183个是下调的,105个是上调的。Figure 3 is a volcano map of differential proteins between the cervical cancer non-metastasis group and the cervical cancer lymph node metastasis group, and the volcano map is used to show the results of differential proteins in the cervical cancer lymph node metastasis group. Among them, a total of 58 proteins were screened, and there were significant differences in patients with cervical cancer lymph node metastasis compared with those without recurrence and metastasis. Among these proteins, 31 were downregulated and 27 were upregulated. Figure 4 is a volcano map of differential metabolism between the cervical cancer non-metastasis group and the cervical cancer lymph node metastasis group, and the volcano map is used to show the results of differential metabolites in the cervical cancer lymph node metastasis group. Among them, a total of 288 metabolites were screened, which were significantly different between patients with cervical cancer lymph node metastasis and those without recurrence and metastasis. Among these metabolites, 183 were downregulated and 105 were upregulated.
图5为本实施例中生信分析得到的宫颈癌淋巴转移标志物中三个标志物的ROC曲线(receiver operating characteristic curve)分析,即受试者工作特征曲线分析。通过绘制ROC并计算曲线下面积(AUC)以评价三个标志物诊断宫颈癌淋巴转移的敏感性和特异性。判断标准如下:当AUC<0.5时,表示诊断无意义;AUC=0.5-0.7时,表示诊断准确性较低;AUC=0.7-0.9时,表示诊断准确性中等;AUC>0.9时,表示诊断准确性高。也即,ROC曲线中,AUC值为ROC曲线所覆盖的区域面积,其值越大,表明模型预测的准确率越高。Figure 5 is an ROC curve (receiver operating characteristic curve) analysis of the three markers of cervical cancer lymph node metastasis markers obtained by bioinformatics analysis in this embodiment, that is, the receiver operating characteristic curve analysis. The sensitivity and specificity of the three markers in diagnosing cervical cancer lymph node metastasis are evaluated by drawing ROC and calculating the area under the curve (AUC). The judgment criteria are as follows: when AUC < 0.5, it means that the diagnosis is meaningless; when AUC = 0.5-0.7, it means that the diagnostic accuracy is low; when AUC = 0.7-0.9, it means that the diagnostic accuracy is medium; when AUC > 0.9, it means that the diagnostic accuracy is high. That is, in the ROC curve, the AUC value is the area covered by the ROC curve. The larger the value, the higher the accuracy of the model prediction.
从图5可见,本实施例中筛选出的角蛋白6A、静息巯基氧化酶-1(QSOX1)和对氧磷酶1(PON1)3种标志物单独均具有较高的宫颈癌淋巴转移诊断准确率,其中角蛋白6A(KRT6A)的AUC值为0.909,静息巯基氧化酶-1(QSOX1)的AUC值为0.907,对氧磷酶1(PON1)的AUC值为0.907。说明静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中任意一个标志物都可以用来诊断是否存在宫颈癌淋巴转移。As can be seen from Figure 5, the three markers of keratin 6A, resting sulfhydryl oxidase-1 (QSOX1) and paraoxonase 1 (PON1) screened in this example all have high diagnostic accuracy for cervical cancer lymph node metastasis, among which the AUC value of keratin 6A (KRT6A) is 0.909, the AUC value of resting sulfhydryl oxidase-1 (QSOX1) is 0.907, and the AUC value of paraoxonase 1 (PON1) is 0.907. It shows that any one of the markers of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A can be used to diagnose whether there is cervical cancer lymph node metastasis.
四、利用逻辑回归进行标志物组合建模4. Marker combination modeling using logistic regression
针对宫颈癌淋巴转移组,将之前得到的宫颈癌淋巴转移3个候选生物标志物结合,构建逻辑回归模型,并进行ROC曲线分析评价。图6展示了宫颈癌淋巴转移的3个标志物组合模型ROC分析结果,结果表明生物标志物组合的AUC值为0.973。相比较与前述单一标志物来说,组合的静息巯基氧化酶-1、对氧磷酶1和角蛋白6A这3种标志物的组合具有更好的预测准确性。For the cervical cancer lymph node metastasis group, the three candidate biomarkers of cervical cancer lymph node metastasis obtained previously were combined to construct a logistic regression model, and ROC curve analysis and evaluation were performed. Figure 6 shows the ROC analysis results of the three marker combination model of cervical cancer lymph node metastasis, and the results show that the AUC value of the biomarker combination is 0.973. Compared with the aforementioned single markers, the combination of the three markers of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A has better predictive accuracy.
实施例2:生物标志物的进一步确认Example 2: Further confirmation of biomarkers
1.选取另外8例宫颈癌淋巴转移患者和10例宫颈癌淋巴无转移患者的血浆样品并参考实施例1测定角蛋白6A、静息巯基氧化酶-1(QSOX1)和对氧磷酶1(PON1)三种生物标志物的含量,并与宫颈癌淋巴无转移患者血浆中该三种生物标志物的含量进行比较。差异的标准是差异倍数(Fold change)≥1.2或≤0.83,P值<0.05。1. Plasma samples of 8 other patients with cervical cancer lymph node metastasis and 10 patients with cervical cancer without lymph node metastasis were selected and the contents of three biomarkers, keratin 6A, resting sulfhydryl oxidase-1 (QSOX1) and paraoxonase 1 (PON1), were determined according to Example 1, and compared with the contents of the three biomarkers in the plasma of patients with cervical cancer without lymph node metastasis. The difference standard was fold change ≥ 1.2 or ≤ 0.83, and P value < 0.05.
结果显示,对于该三种生物标志物中任意一种,选取的8例宫颈癌淋巴转移患者中均有8例与对照组存在显著差异,即8例阳性患者。The results showed that for any of the three biomarkers, 8 out of the 8 selected patients with cervical cancer lymph node metastasis had significant differences compared with the control group, that is, 8 positive patients.
按照实施例1所构建的组合模型分析,且设定每一个标志物的指标值为该标志物在受试者人体血浆中的水平值与在没有发生宫颈癌淋巴转移的患者血浆中的水平值之间的比值,每一个标志物的风险范围如下:静息巯基氧化酶-1对应的提示宫颈癌淋巴转移的所述风险范围为指标值小于0.59;对氧磷酶1对应的提示宫颈癌淋巴转移的所述风险范围为指标值小于0.56;角蛋白6A对应的提示宫颈癌淋巴转移的所述风险范围为指标值小于0.24。结果发现,选取的8例宫颈癌淋巴转移患者全部落入风险范围,表明本发明的三种生物标志物的组合相对单一生物标志物而言,具有更优的准确性。According to the combined model analysis constructed in Example 1, and the index value of each marker is set as the ratio between the level value of the marker in the human plasma of the subject and the level value in the plasma of the patient without cervical cancer lymph node metastasis, the risk range of each marker is as follows: the risk range corresponding to resting sulfhydryl oxidase-1 indicating cervical cancer lymph node metastasis is an index value less than 0.59; the risk range corresponding to paraoxonase 1 indicating cervical cancer lymph node metastasis is an index value less than 0.56; the risk range corresponding to keratin 6A indicating cervical cancer lymph node metastasis is an index value less than 0.24. It was found that all the selected 8 patients with cervical cancer lymph node metastasis fell into the risk range, indicating that the combination of the three biomarkers of the present invention has better accuracy than a single biomarker.
2.分别对三个生物标志物进行ROC曲线分析,分别得到角蛋白6A(KRT6A)的AUC值为0.625,静息巯基氧化酶-1(QSOX1)的AUC值为0.975,对氧磷酶1(PON1)的AUC值为0.912。说明静息巯基氧化酶-1、对氧磷酶1和角蛋白6A中任意一个标志物都可以用来诊断是否存在宫颈癌淋巴转移。图7为实施例2中生信分析得到的宫颈癌淋巴转移标志物中三个标志物的ROC曲线分析。2. The ROC curve analysis of the three biomarkers was performed respectively, and the AUC values of keratin 6A (KRT6A) were 0.625, the AUC value of resting sulfhydryl oxidase-1 (QSOX1) was 0.975, and the AUC value of paraoxonase 1 (PON1) was 0.912. It shows that any one of the markers of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A can be used to diagnose whether there is cervical cancer lymph node metastasis. Figure 7 is the ROC curve analysis of the three markers of cervical cancer lymph node metastasis markers obtained by bioinformatics analysis in Example 2.
3.在另外选取的8例淋巴转移患者和10例无转移患者队列中,将三个生物标志物结合并构建逻辑回归模型,并利用ROC曲线进行分析评价。图8展示了宫颈癌淋巴转移的3个标志物组合模型ROC分析结果,结果表明生物标志物组合的AUC值为0.988。相比较与前述单一标志物来说,组合的静息巯基氧化酶-1、对氧磷酶1和角蛋白6A这3种标志物的组合具有更好的预测准确性。3. In the cohort of 8 patients with lymph node metastasis and 10 patients without metastasis, the three biomarkers were combined to construct a logistic regression model, and the ROC curve was used for analysis and evaluation. Figure 8 shows the ROC analysis results of the three marker combination model for cervical cancer lymph node metastasis, and the results show that the AUC value of the biomarker combination is 0.988. Compared with the above single markers, the combination of the three markers of resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A has better predictive accuracy.
实施例3:宫颈癌淋巴转移的ELISA试剂盒Example 3: ELISA kit for cervical cancer lymph node metastasis
本实施例提供了一种用于诊断宫颈癌淋巴转移的ELISA试剂盒,该试剂盒的设计旨在检测受试者血浆中静息巯基氧化酶-1、对氧磷酶1和角蛋白6A这三种标志物的含量水平,从而实现对宫颈癌淋巴转移的精准诊断。This embodiment provides an ELISA kit for diagnosing lymph node metastasis of cervical cancer. The kit is designed to detect the levels of three markers, namely, resting sulfhydryl oxidase-1, paraoxonase 1 and keratin 6A in the plasma of subjects, so as to achieve accurate diagnosis of lymph node metastasis of cervical cancer.
试剂盒组成:Kit composition:
静息巯基氧化酶-1(Prx-1)ELISA分析:Resting sulfhydryl oxidase-1 (Prx-1) ELISA analysis:
包括用于检测静息巯基氧化酶-1的抗体、标准品、底物、洗涤缓冲液等试剂和材料。Includes antibodies, standards, substrates, wash buffers and other reagents and materials for detecting resting sulfhydryl oxidase-1.
用于检测受试者血浆中静息巯基氧化酶-1的含量水平,并根据标准曲线进行定量分析。Used to detect the level of resting sulfhydryl oxidase-1 in the subjects' plasma and perform quantitative analysis based on the standard curve.
对氧磷酶1(Tyr-1)ELISA分析:Paraoxonase 1 (Tyr-1) ELISA analysis:
包括用于检测对氧磷酶1的抗体、标准品、底物、洗涤缓冲液等试剂和材料。Includes reagents and materials such as antibodies, standards, substrates, washing buffer, etc. for detecting paraoxonase 1.
用于检测受试者血浆中对氧磷酶1的含量水平,并根据标准曲线进行定量分析。Used to detect the level of paraoxonase 1 in the plasma of subjects and perform quantitative analysis based on the standard curve.
角蛋白6A(CK6A)ELISA分析:Keratin 6A (CK6A) ELISA analysis:
包括用于检测角蛋白6A的抗体、标准品、底物、洗涤缓冲液等试剂和材料。用于检测受试者血浆中角蛋白6A的含量水平,并根据标准曲线进行定量分析。It includes antibodies, standards, substrates, washing buffer and other reagents and materials for detecting keratin 6A. It is used to detect the content level of keratin 6A in the plasma of the subject and perform quantitative analysis according to the standard curve.
检测流程可如下:The detection process can be as follows:
取出受试者的血浆样本,并按照试剂盒说明书进行标本处理和预处理步骤。Take out the subject's plasma sample and perform specimen processing and pretreatment steps according to the kit instructions.
将预处理后的血浆样本加入到各自的ELISA板孔中,与静息巯基氧化酶-1、对氧磷酶1和角蛋白6A的抗体发生特异性反应。The pretreated plasma samples were added to the respective ELISA plate wells and reacted specifically with antibodies against resting sulfhydryl oxidase-1, paraoxonase 1, and keratin 6A.
使用洗涤缓冲液清洗孔板,以去除未结合的物质。Wash the plate with wash buffer to remove unbound material.
加入底物,并在适当的条件下进行反应,产生可测量的颜色。Substrate is added and the reaction is allowed to proceed under appropriate conditions to produce a measurable color.
使用酶标仪对反应产物的吸光度进行测量,并根据标准曲线计算出样本中静息巯基氧化酶-1、对氧磷酶1和角蛋白6A的含量。The absorbance of the reaction product was measured using an enzyme-labeled instrument, and the contents of resting sulfhydryl oxidase-1, paraoxonase 1, and keratin 6A in the sample were calculated based on the standard curve.
根据各标志物的含量水平,结合预设的诊断标准,判断受试者是否存在宫颈癌淋巴转移。Based on the content levels of each marker and the preset diagnostic criteria, it is determined whether the subject has cervical cancer lymph node metastasis.
以上所述的实施例只是本发明的一种较佳的方案,然其并非用以限制本发明。有关技术领域的普通技术人员,在不脱离本发明的精神和范围的情况下,还可以做出各种变化和变型。因此凡采取等同替换或等效变换的方式所获得的技术方案,均落在本发明的保护范围内。The above-described embodiment is only a preferred solution of the present invention, but it is not intended to limit the present invention. A person skilled in the relevant technical field may make various changes and modifications without departing from the spirit and scope of the present invention. Therefore, any technical solution obtained by equivalent replacement or equivalent transformation falls within the protection scope of the present invention.
上述本发明实施例序号仅仅为了描述,不代表实施例的优劣。The serial numbers of the above embodiments of the present invention are only for description and do not represent the advantages or disadvantages of the embodiments.
以上所述仅为本发明的较佳实施例,并不用以限制本发明,凡在本发明的精神和原则之内,所作的任何修改、等同替换、改进等,均应包含在本发明的保护范围之内。The above description is only a preferred embodiment of the present invention and is not intended to limit the present invention. Any modifications, equivalent substitutions, improvements, etc. made within the spirit and principle of the present invention should be included in the protection scope of the present invention.
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