CN118222623A - Application of Rice AGO12 Gene and Its Encoded Protein in Controlling Rice Grain Size and Yield - Google Patents
Application of Rice AGO12 Gene and Its Encoded Protein in Controlling Rice Grain Size and Yield Download PDFInfo
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Abstract
Description
技术领域Technical Field
本发明涉及生物技术、基因技术领域,尤其涉及水稻AGO12基因及其编码蛋白在控制水稻籽粒大小和产量中的应用。The invention relates to the fields of biotechnology and gene technology, and in particular to the application of rice AGO12 gene and its encoded protein in controlling rice grain size and yield.
背景技术Background technique
随着全球人口的持续增长,粮食安全问题日益凸显,其成为社会共同关注的焦点。而随着经济的快速发展和城市化进程的加速,农业用地面临着前所未有的压力。工业和住宅用地的扩张导致传统农业用地面积不断减少,这对农业生产构成了直接的挑战。同时,随着居民生活水平的提升,对于多样化农产品的需求增加,非粮食作物的种植面积相应扩大,这在一定程度上影响了粮食作物的种植面积和产量,进而对国家粮食安全构成了潜在威胁。With the continuous growth of the global population, the issue of food security has become increasingly prominent and has become a focus of common concern in society. With the rapid development of the economy and the acceleration of urbanization, agricultural land is facing unprecedented pressure. The expansion of industrial and residential land has led to a continuous reduction in the area of traditional agricultural land, which poses a direct challenge to agricultural production. At the same time, with the improvement of residents' living standards, the demand for diversified agricultural products has increased, and the planting area of non-food crops has expanded accordingly, which has affected the planting area and yield of food crops to a certain extent, and thus posed a potential threat to national food security.
在众多粮食作物中,水稻占据着举足轻重的地位。其产量的高低直接关系到国家粮食安全和人民的生活水平。因此,提升水稻产量,尤其是通过科学手段改善水稻的农艺性状,对于保障国家粮食安全具有至关重要的作用。Among many food crops, rice occupies a pivotal position. Its yield is directly related to national food security and people's living standards. Therefore, increasing rice yield, especially improving the agronomic traits of rice through scientific means, plays a vital role in ensuring national food security.
水稻的籽粒大小是决定产量的关键农艺性状之一。籽粒大小不仅直接影响着单位面积的产量,而且与稻谷的加工品质和外观品质密切相关,进而影响稻米的市场价值和消费者的接受度。因此,深入研究水稻籽粒发育的调控机制,挖掘与籽粒大小相关的基因,不仅可以提高水稻的产量和品质,还能够为水稻的分子育种提供理论基础和技术支持。Rice grain size is one of the key agronomic traits that determines yield. Grain size not only directly affects the yield per unit area, but is also closely related to the processing quality and appearance quality of rice, which in turn affects the market value of rice and consumer acceptance. Therefore, in-depth research on the regulatory mechanism of rice grain development and the discovery of genes related to grain size can not only improve rice yield and quality, but also provide a theoretical basis and technical support for rice molecular breeding.
此外,随着生物技术的不断进步,特别是基因编辑技术的发展,研究人员有能力更精确地对水稻的遗传特性进行改良。通过基因工程手段,可以培育出更适应环境变化、抗病性强、产量高的水稻新品种,从而在有限的土地资源上实现更高的粮食产出。In addition, with the continuous advancement of biotechnology, especially the development of gene editing technology, researchers are able to improve the genetic characteristics of rice more accurately. Through genetic engineering, new rice varieties that are more adaptable to environmental changes, have strong disease resistance and high yield can be cultivated, thereby achieving higher food output on limited land resources.
综上所述,面对人口增长和土地资源紧张的双重压力,加强水稻遗传研究,优化水稻的农艺性状,提高水稻产量和品质,对于确保我国粮食安全、促进农业可持续发展具有重大的现实意义和深远的战略影响。In summary, facing the dual pressures of population growth and tight land resources, strengthening rice genetic research, optimizing rice agronomic traits, and improving rice yield and quality have great practical significance and far-reaching strategic impact for ensuring my country's food security and promoting sustainable agricultural development.
发明内容Summary of the invention
有鉴于此,本发明的目的在于提出一种实施可靠、应用灵活,且能够提高植物籽粒大小和产量的水稻AGO12基因及其编码蛋白在控制水稻籽粒大小和产量中的应用。In view of this, the object of the present invention is to propose a method for using the rice AGO12 gene and its encoded protein in controlling rice grain size and yield, which is reliable in implementation, flexible in application, and capable of increasing plant grain size and yield.
为了实现上述的技术目的,本发明所采用的技术方案为:In order to achieve the above technical objectives, the technical solution adopted by the present invention is:
OsAGO12蛋白或编码该蛋白的OsAGO12基因或包含该基因的载体的应用,所述应用为如下M1)-M6)中的任一:The use of OsAGO12 protein or OsAGO12 gene encoding the protein or a vector comprising the gene, wherein the use is any one of the following M1)-M6):
M1)调控植物产量;M1) Regulate plant yield;
M2)调控植物籽粒生长发育和/或籽粒大小;M2) regulating plant seed growth and/or seed size;
M3)调控植物穗发育和分枝;M3) regulates plant spike development and branching;
M4)调控植物籽粒外颖壳细胞大小;M4) regulates the size of the outer glume cells of plant grains;
M5)培育籽粒变大和/或产量提高的转基因植物中的应用;M5) Application in cultivating transgenic plants with enlarged grains and/or increased yield;
M6)植物育种;M6) Plant breeding;
其中,所述OsAGO12蛋白为如下之一:Wherein, the OsAGO12 protein is one of the following:
a1)氨基酸序列如SEQ ID NO:2所示的蛋白质;a1) a protein with an amino acid sequence as shown in SEQ ID NO: 2;
a2)在序列表SEQ ID NO:2所示的氨基酸序列的N端和/或C端连接标签得到的融合蛋白质;a2) a fusion protein obtained by connecting a tag to the N-terminus and/or C-terminus of the amino acid sequence shown in SEQ ID NO: 2 in the sequence listing;
a3)将序列表SEQ ID NO:2所示的氨基酸序列经过一个或几个氨基酸残基的取代和/或缺失和/或添加得到的具有相同功能的蛋白质;a3) a protein having the same function obtained by replacing and/or deleting and/or adding one or more amino acid residues of the amino acid sequence shown in SEQ ID NO: 2;
a4)与序列表SEQ ID NO:2所示的氨基酸序列具有75%或75%以上的同源性且具有相同功能的蛋白质。a4) A protein having 75% or more homology with the amino acid sequence shown in SEQ ID NO: 2 in the sequence listing and having the same function.
为了使得a1)中氨基酸序列的OsAGO12蛋白便于纯化,可以通过在SEQ ID NO:2所示的蛋白质的氨基末端连接上表1所示的标签序列。In order to facilitate the purification of the OsAGO12 protein with the amino acid sequence in a1), the tag sequence shown in Table 1 can be connected to the amino terminus of the protein shown in SEQ ID NO:2.
表1Table 1
a3)中,所述一个或几个氨基酸残基的取代和/或缺失和/或添加为不超过10个氨基酸残基的取代和/或缺失和/或添加;同时,a3)中蛋白质可人工合成,也可先合成其编码基因,再进行生物表达得到。In a3), the substitution and/or deletion and/or addition of one or several amino acid residues is the substitution and/or deletion and/or addition of no more than 10 amino acid residues; at the same time, the protein in a3) can be artificially synthesized, or its encoding gene can be synthesized first and then obtained by biological expression.
除此之外,a3)中,所述蛋白质的编码基因可通过将SEQ ID NO:1所示的DNA序列中缺失一个或几个氨基酸残基的密码子,和/或进行一个或几个碱基对的错义突变,和/或在其5′端和/或3′端连上表1所示的标签的编码序列得到。In addition, in a3), the coding gene of the protein can be obtained by deleting one or several codons of amino acid residues in the DNA sequence shown in SEQ ID NO: 1, and/or performing missense mutation of one or several base pairs, and/or connecting the coding sequence of the tag shown in Table 1 to its 5′ end and/or 3′ end.
a4)中的同源性包括与本方案的SEQ ID NO:2所示的氨基酸序列具有75%或更高,或80%或更高,或85%或更高,或90%或更高,或95%或更高同源性的氨基酸序列。The homology in a4) includes amino acid sequences having 75% or more, or 80% or more, or 85% or more, or 90% or more, or 95% or more homology with the amino acid sequence shown in SEQ ID NO: 2 of the present embodiment.
另外,所述OsAGO12基因为如下之一:In addition, the OsAGO12 gene is one of the following:
b1)具有序列表SEQ ID NO:1所示核苷酸序列的cDNA分子;b1) a cDNA molecule having a nucleotide sequence as shown in SEQ ID NO: 1 in the sequence listing;
b2)与序列表SEQ ID NO:1所示核苷酸序列具有75%或75%以上同一性,且编码所述OsAGO12蛋白的cDNA分子或基因组DNA分子;b2) a cDNA molecule or a genomic DNA molecule that has 75% or more identity with the nucleotide sequence shown in SEQ ID NO: 1 in the sequence listing and encodes the OsAGO12 protein;
b3)与b1)或b2)限定的核苷酸序列杂交,且编码所述OsAGO12蛋白的cDNA分子或基因组DNA分子。b3) a cDNA molecule or a genomic DNA molecule that hybridizes with the nucleotide sequence defined in b1) or b2) and encodes the OsAGO12 protein.
除上述之外,本申请还提供了一种包含OsAGO12蛋白的生物材料的应用,所述应用为如下M1)-M6)中的任一:In addition to the above, the present application also provides an application of a biomaterial comprising OsAGO12 protein, wherein the application is any one of the following M1)-M6):
M1)调控植物产量;M1) Regulate plant yield;
M2)调控植物籽粒生长发育和/或籽粒大小;M2) regulating plant seed growth and/or seed size;
M3)调控植物穗发育和分枝;M3) regulates plant spike development and branching;
M4)调控植物籽粒外颖壳细胞大小;M4) regulates the size of the outer glume cells of plant grains;
M5)培育籽粒变大和/或产量提高的转基因植物中的应用;M5) Application in cultivating transgenic plants with enlarged grains and/or increased yield;
M6)植物育种;M6) Plant breeding;
其中,所述OsAGO12蛋白为如下之一:Wherein, the OsAGO12 protein is one of the following:
a1)氨基酸序列如SEQ ID NO:2所示的蛋白质;a1) a protein with an amino acid sequence as shown in SEQ ID NO: 2;
a2)在序列表SEQ ID NO:2所示的氨基酸序列的N端和/或C端连接标签得到的融合蛋白质;a2) a fusion protein obtained by connecting a tag to the N-terminus and/or C-terminus of the amino acid sequence shown in SEQ ID NO: 2 in the sequence listing;
a3)将序列表SEQ ID NO:2所示的氨基酸序列经过一个或几个氨基酸残基的取代和/或缺失和/或添加得到的具有相同功能的蛋白质;a3) a protein having the same function obtained by replacing and/or deleting and/or adding one or more amino acid residues of the amino acid sequence shown in SEQ ID NO: 2;
a4)与序列表SEQ ID NO:2所示的氨基酸序列具有75%或75%以上的同源性且具有相同功能的蛋白质。a4) A protein having 75% or more homology with the amino acid sequence shown in SEQ ID NO: 2 in the sequence listing and having the same function.
作为一种可能的实施方式,进一步,本方案所述的生物材料为如下A1)-A8)中的任一:As a possible implementation mode, further, the biomaterial described in this solution is any one of the following A1)-A8):
A1)编码OsAGO12蛋白质的核酸分子;A1) a nucleic acid molecule encoding an OsAGO12 protein;
A2)含有A1)所述核酸分子的表达盒;A2) an expression cassette containing the nucleic acid molecule described in A1);
A3)含有A1)所述核酸分子的重组载体;A3) a recombinant vector containing the nucleic acid molecule described in A1);
A4)含有A2)所述表达盒的重组载体;A4) a recombinant vector containing the expression cassette described in A2);
A5)含有A1)所述核酸分子的重组微生物;A5) a recombinant microorganism containing the nucleic acid molecule described in A1);
A6)含有A2)所述表达盒的重组微生物;A6) a recombinant microorganism containing the expression cassette described in A2);
A7)含有A3)所述重组载体的重组微生物;A7) a recombinant microorganism containing the recombinant vector described in A3);
A8)含有A4)所述重组载体的重组微生物。A8) A recombinant microorganism containing the recombinant vector described in A4).
作为一种较优的实施选择,优选的,本方案A1)所述的核酸分子为如下之一:As a preferred implementation option, preferably, the nucleic acid molecule described in scheme A1) is one of the following:
b1)具有序列表SEQ ID NO:1所示核苷酸序列的cDNA分子;b1) a cDNA molecule having a nucleotide sequence as shown in SEQ ID NO: 1 in the sequence listing;
b2)与序列表SEQ ID NO:1所示核苷酸序列具有75%或75%以上同一性,且编码所述OsAGO12蛋白的cDNA分子或基因组DNA分子;b2) a cDNA molecule or a genomic DNA molecule that has 75% or more identity with the nucleotide sequence shown in SEQ ID NO: 1 in the sequence listing and encodes the OsAGO12 protein;
b3)与b1)或b2)限定的核苷酸序列杂交,且编码所述OsAGO12蛋白的cDNA分子或基因组DNA分子。b3) a cDNA molecule or a genomic DNA molecule that hybridizes with the nucleotide sequence defined in b1) or b2) and encodes the OsAGO12 protein.
其中,所述核酸分子可以是DNA,如cDNA、基因组DNA或重组DNA;所述核酸分子也可以是RNA,如mRNA或hnRNA等。The nucleic acid molecule may be DNA, such as cDNA, genomic DNA or recombinant DNA; the nucleic acid molecule may also be RNA, such as mRNA or hnRNA.
在上述内容基础上,本领域普通技术人员可以很容易地采用已知的方法,例如定向进化和点突变的方法,对本发明的编码OsAGO12蛋白质的核苷酸序列进行突变。那些经过人工修饰的,具有编码OsAGO12蛋白质的核苷酸序列75%或者更高同一性的核苷酸,只要编码OsAGO12蛋白质且具有相同功能,均是衍生于本发明的核苷酸序列并且等同于本发明的序列。Based on the above, a person skilled in the art can easily mutate the nucleotide sequence encoding the OsAGO12 protein of the present invention by using known methods, such as directed evolution and point mutation. Those artificially modified nucleotides with 75% or higher identity to the nucleotide sequence encoding the OsAGO12 protein are derived from the nucleotide sequence of the present invention and are equivalent to the sequence of the present invention as long as they encode the OsAGO12 protein and have the same function.
这里使用的术语“同一性”指与天然核酸序列的序列相似性。“同一性”包括与本发明的编码序列SEQ ID NO:2所示的氨基酸序列组成的蛋白质的核苷酸序列具有75%或更高,或85%或更高,或90%或更高,或95%或更高同一性的核苷酸序列。同一性可以用肉眼或计算机软件进行评价。使用计算机软件,两个或多个序列之间的同一性可以用百分比(%)表示,其可以用来评价相关序列之间的同一性。The term "identity" as used herein refers to sequence similarity to a natural nucleic acid sequence. "Identity" includes nucleotide sequences that have 75% or more, or 85% or more, or 90% or more, or 95% or more identity to the nucleotide sequence of the protein consisting of the amino acid sequence shown in the coding sequence SEQ ID NO:2 of the present invention. Identity can be evaluated by the naked eye or by computer software. Using computer software, the identity between two or more sequences can be expressed as a percentage (%), which can be used to evaluate the identity between related sequences.
上述75%或75%以上同一性,可为80%、85%、90%或95%以上的同一性。The aforementioned 75% or more identity may be 80%, 85%, 90% or 95% or more identity.
上述A2)所述的含有编码OsAGO12蛋白质的核酸分子的表达盒(OsAGO12基因表达盒)是指能够在宿主细胞中表达OsAGO12蛋白质的DNA,该DNA不但可包括启动OsAGO12转录的启动子,还可包括终止OsAGO12转录的终止子。进一步,所述表达盒还可包括增强子序列。可用于本发明的启动子包括但不限于:组成型启动子;组织、器官和发育特异的启动子及诱导型启动子。The expression cassette (OsAGO12 gene expression cassette) containing a nucleic acid molecule encoding the OsAGO12 protein described in A2) above refers to a DNA capable of expressing the OsAGO12 protein in a host cell, and the DNA may include not only a promoter for initiating transcription of OsAGO12, but also a terminator for terminating transcription of OsAGO12. Furthermore, the expression cassette may also include an enhancer sequence. Promoters that can be used in the present invention include, but are not limited to: constitutive promoters; tissue, organ and development-specific promoters and inducible promoters.
可用现有的表达载体构建含有所述OsAGO12基因表达盒的重组载体。所述植物表达载体包括双元农杆菌载体和可用于植物微弹轰击的载体等。如pCambia2300、pCambia1300、pCambia1301、pCambia3301、pWM101等。所述植物表达载体还可包含外源基因的3′端非翻译区域,即包含聚腺苷酸信号和任何其它参与mRNA加工或基因表达的DNA片段。所述聚腺苷酸信号可引导聚腺苷酸加入到mRNA前体的3′端,如农杆菌冠瘿瘤诱导(Ti)质粒基因(如胭脂碱合成酶基因Nos)、植物基因(如大豆贮存蛋白基因)3′端转录的非翻译区均具有类似功能。在本发明中,构建植物表达载体时,可以利用增强子序列,如翻译增强子或转录增强子,以提升基因的表达效率。这些增强子序列通常位于ATG起始密码子或其邻近区域,但必须与编码序列的阅读框一致,以确保正确的蛋白质翻译过程。翻译控制信号和起始密码子可以源自自然界,也可以通过合成方法获得,它们也可以来源于转录起始区域或结构基因的一部分。为了便于对转基因植物细胞或植株进行鉴定和筛选,本发明涉及的植物表达载体可以包含多种标记基因。这些标记基因可以是能够在植物体内表达并产生颜色变化或发光化合物的酶基因(例如β-葡萄糖苷酶基因GUS、萤光素酶基因等),或者是提供抗生素抗性(如nptII、bar、hph、dhfr和EPSPS基因)的基因,以及抗化学试剂的标记基因(例如抗除莠剂基因)和提供特定代谢能力的基因(如甘露糖-6-磷酸异构酶基因)。考虑到转基因植物的生物安全性和环境影响,本发明还提供了一种无需使用选择性标记基因的方法,即通过逆境筛选直接筛选转化植株。这种方法旨在减少转基因植物可能带来的生态风险,同时简化了转基因植物的筛选和鉴定过程,提高了转基因技术的安全性和可控性。通过这些创新方法,本发明旨在促进植物遗传改良的效率和安全性,为农业生产和生态环境保护提供支持。上述载体可为质粒、黏粒、噬菌体或病毒载体。在本发明的一个具体实施例中,所述载体为pCambia2300-Actin。所述重组载体为为pCambia2300-Actin-OsAGO12。所述为pCambia2300-Actin-OsAGO12为在为pCambia2300-Actin载体的Sal I与PstI酶切位点之间插入了序列表的SEQ ID NO:1所示的第1-3177位核苷酸所示的双链DNA分子。The recombinant vector containing the OsAGO12 gene expression cassette can be constructed using an existing expression vector. The plant expression vector includes a binary Agrobacterium vector and a vector that can be used for plant microprojectile bombardment, etc. Such as pCambia2300, pCambia1300, pCambia1301, pCambia3301, pWM101, etc. The plant expression vector may also include the 3′ non-translated region of the exogenous gene, that is, a polyadenylic acid signal and any other DNA fragment involved in mRNA processing or gene expression. The polyadenylic acid signal can guide the addition of polyadenylic acid to the 3′ end of the mRNA precursor, such as the Agrobacterium crown gall induction (Ti) plasmid gene (such as the nopaline synthase gene Nos), the plant gene (such as the soybean storage protein gene) 3′ end transcribed non-translated region has similar functions. In the present invention, when constructing a plant expression vector, an enhancer sequence, such as a translation enhancer or a transcription enhancer, can be used to improve the expression efficiency of the gene. These enhancer sequences are usually located at the ATG start codon or its adjacent region, but must be consistent with the reading frame of the coding sequence to ensure the correct protein translation process. Translation control signals and start codons can be derived from nature, or can be obtained by synthetic methods, and they can also be derived from a part of the transcription start region or structural gene. In order to facilitate the identification and screening of transgenic plant cells or plants, the plant expression vectors involved in the present invention can contain a variety of marker genes. These marker genes can be enzyme genes (such as β-glucosidase gene GUS, luciferase gene, etc.) that can be expressed in plants and produce color changes or luminescent compounds, or genes that provide antibiotic resistance (such as nptII, bar, hph, dhfr and EPSPS genes), as well as marker genes for chemical resistance (such as herbicide resistance genes) and genes that provide specific metabolic capabilities (such as mannose-6-phosphate isomerase gene). Taking into account the biosafety and environmental impact of transgenic plants, the present invention also provides a method without the use of selective marker genes, that is, directly screening transformed plants through adverse screening. This method aims to reduce the ecological risks that may be caused by transgenic plants, while simplifying the screening and identification process of transgenic plants and improving the safety and controllability of transgenic technology. Through these innovative methods, the present invention aims to promote the efficiency and safety of plant genetic improvement and provide support for agricultural production and ecological environment protection. The above-mentioned vector can be a plasmid, a cosmid, a phage or a viral vector. In a specific embodiment of the present invention, the vector is pCambia2300-Actin. The recombinant vector is pCambia2300-Actin-OsAGO12. The pCambia2300-Actin-OsAGO12 is a double-stranded DNA molecule shown in nucleotides 1-3177 shown in SEQ ID NO:1 of the sequence list inserted between the Sal I and PstI restriction sites of the pCambia2300-Actin vector.
上述微生物可为酵母、细菌、藻或真菌,如农杆菌。在本发明的一个具体实施例中,所述农杆EHA105,所述重组菌为含有所述pCambia2300-Actin-OsAGO12的农杆菌EHA105。The microorganisms can be yeast, bacteria, algae or fungi, such as Agrobacterium. In a specific embodiment of the present invention, the Agrobacterium EHA105 and the recombinant bacteria are Agrobacterium EHA105 containing the pCambia2300-Actin-OsAGO12.
作为一种较优的实施选择,优选的,本方案上述的M1)中,所述调控植物产量为调控植物籽粒千粒重,具体为提高植物籽粒千粒重。As a preferred implementation option, preferably, in the above M1) of this scheme, the regulating plant yield is regulating the thousand-grain weight of plant grains, specifically increasing the thousand-grain weight of plant grains.
M2)中所述调控植物籽粒大小为调控植物籽粒长度和/或籽粒宽度;M2) The regulating of plant seed size is regulating plant seed length and/or seed width;
M4)中所述调控植物籽粒外颖壳细胞大小为调控植物籽粒外颖壳细胞的长度和/或细胞宽度。The regulation of the size of the outer husk cells of plant grains in M4) is to regulate the length and/or cell width of the outer husk cells of plant grains.
本方案中,所述植物育种目的为培育大籽粒高产植物品种。In this scheme, the purpose of plant breeding is to cultivate large-grain and high-yield plant varieties.
作为一种较优的实施选择,优选的,本方案所述植物为单子叶植物或双子叶植物;As a preferred implementation option, preferably, the plant described in this scheme is a monocotyledonous plant or a dicotyledonous plant;
或,所述植物为水稻。Alternatively, the plant is rice.
基于上述,本方案还提供一种培育籽粒变大和/或产量提高的转基因植物的方法,其包括:获取具有OsAGO12蛋白或编码该蛋白的OsAGO12基因的目的植物,提高所述目的植物中OsAGO12蛋白的表达量和/或活性,以获得转基因植物;Based on the above, the present solution also provides a method for cultivating transgenic plants with enlarged grains and/or increased yield, which comprises: obtaining a target plant having an OsAGO12 protein or an OsAGO12 gene encoding the protein, and increasing the expression amount and/or activity of the OsAGO12 protein in the target plant to obtain a transgenic plant;
其中,所述转基因植物的籽粒大小和/或产量高于所述目的植物。Wherein, the seed size and/or yield of the transgenic plant are higher than those of the target plant.
作为一种较优的实施选择,优选的,本方案所述转基因植物的籽粒大小和/或产量高于所述目的植物的体现为如下N1)-N6)中任一种:As a preferred implementation option, preferably, the grain size and/or yield of the transgenic plant in this scheme is higher than that of the target plant, which is embodied in any one of the following N1)-N6):
N1)转基因植物穗长大于所述目的植物;N1) the transgenic plant ear grows larger than the target plant;
N2)转基因植物穗的初级分枝数大于所述目的植物;N2) the number of primary branches of the transgenic plant ear is greater than that of the target plant;
N3)转基因植物穗的次级分枝数大于所述目的植物。N3) The number of secondary branches on the ear of the transgenic plant is greater than that of the target plant.
N4)转基因植物籽粒的宽度大于所述目的植物;N4) The width of the seeds of the transgenic plant is greater than that of the target plant;
N5)转基因植物籽粒的长度大于所述目的植物;N5) The length of the seeds of the transgenic plant is greater than that of the target plant;
N6)转基因植物籽粒的千粒重大于所述目的植物。N6) The thousand-grain weight of the transgenic plant grains is greater than that of the target plant.
作为一种较优的实施选择,优选的,本方案提高所述目的植物中OsAGO12蛋白的表达量和/或活性的方法为:在所述目的植物中过表达所述OsAGO12蛋白;As a preferred implementation option, preferably, the method of increasing the expression amount and/or activity of the OsAGO12 protein in the target plant in this scheme is: overexpressing the OsAGO12 protein in the target plant;
其中,所述过表达的方法为:将所述的OsAGO12蛋白质的编码基因OsAGO12基因导入目的植物;Wherein, the overexpression method is: introducing the OsAGO12 gene encoding the OsAGO12 protein into the target plant;
所述OsAGO12基因是序列表SEQ ID NO:1所示核苷酸序列的DNA分子。The OsAGO12 gene is a DNA molecule with a nucleotide sequence shown in SEQ ID NO: 1 in the sequence listing.
本方案中,所述“将OsAGO12蛋白质的编码基因导入目的植物”是通过将含有OsAGO12蛋白质编码基因的重组表达载体导入目的植物实现的。所述重组表达载体为将所述OsAGO12蛋白质编码基因插入植物表达载体得到的可以表达所述OsAGO12蛋白质的质粒。In this scheme, the "introduction of the coding gene of the OsAGO12 protein into the target plant" is achieved by introducing a recombinant expression vector containing the coding gene of the OsAGO12 protein into the target plant. The recombinant expression vector is a plasmid that can express the OsAGO12 protein obtained by inserting the coding gene of the OsAGO12 protein into a plant expression vector.
在本发明的一个具体实施例中,所述重组表达载体具体可为:在pCambia2300-Actin载体的多克隆位点(例如Xba I与BamH I酶切位点之间)插入序列表的序列1第1-3177位核苷酸所示双链DNA分子得到的重组质粒pCambia2300-Actin-OsAGO12。In a specific embodiment of the present invention, the recombinant expression vector may be: a recombinant plasmid pCambia2300-Actin-OsAGO12 obtained by inserting a double-stranded DNA molecule shown in nucleotides 1-3177 of sequence 1 in the sequence listing into the multiple cloning site of the pCambia2300-Actin vector (e.g., between the Xba I and BamH I restriction sites).
上述方法中,所述转基因植物理解为不仅包含将所述OsAGO12基因转化目的植物得到的第一代转基因植物,也包括其子代。对于转基因植物,可以在该物种中繁殖该基因,也可用常规育种技术将该基因转移进入相同物种的其它品种,特别包括商业品种中。所述转基因植物包括种子、愈伤组织、完整植株和细胞。In the above method, the transgenic plant is understood to include not only the first generation transgenic plant obtained by transforming the OsAGO12 gene into the target plant, but also its progeny. For transgenic plants, the gene can be propagated in the species, and the gene can also be transferred into other varieties of the same species using conventional breeding techniques, especially including commercial varieties. The transgenic plant includes seeds, callus, whole plants and cells.
上述任一所述的应用或方法中,所述植物为单子叶植物或双子叶植物。所述单子叶植物可为禾本科植物;所述禾本科植物可为水稻属植物。所述水稻属植物可为水稻,例如水稻中花11。In any of the above applications or methods, the plant is a monocot or a dicot. The monocot may be a Gramineae plant; the Gramineae plant may be a Rice plant. The Rice plant may be Rice, such as Rice 11.
本发明方案通过实验发现,在水稻中过表达OsAGO12基因可增加水稻籽粒的长度和宽度,提高水稻籽粒大小和千粒重,从而增加水稻产量。OsAGO12蛋白质可通过调控籽粒外颖壳细胞的大小的,进而实现增加植物籽粒大小、提高植物产量。OsAGO12蛋白质在培育大粒高产植物品种中具有重大的应用价值。The present invention scheme has found through experiments that overexpression of the OsAGO12 gene in rice can increase the length and width of rice grains, improve rice grain size and 1000-grain weight, and thus increase rice yield. OsAGO12 protein can increase plant grain size and improve plant yield by regulating the size of grain outer glume cells. OsAGO12 protein has great application value in cultivating large-grain and high-yield plant varieties.
附图说明BRIEF DESCRIPTION OF THE DRAWINGS
为了更清楚地说明本发明实施例或现有技术中的技术方案,下面将对实施例或现有技术描述中所需要使用的附图作简单地介绍,显而易见地,下面描述中的附图仅仅是本发明的一些实施例,对于本领域普通技术人员来讲,在不付出创造性劳动的前提下,还可以根据这些附图获得其他的附图。In order to more clearly illustrate the embodiments of the present invention or the technical solutions in the prior art, the drawings required for use in the embodiments or the description of the prior art will be briefly introduced below. Obviously, the drawings described below are only some embodiments of the present invention. For ordinary technicians in this field, other drawings can be obtained based on these drawings without paying creative work.
图1为转OsAGO12水稻的Western鉴定。Figure 1 shows the Western identification of OsAGO12 transgenic rice.
图2为转OsAGO12 CRISPR/Cas9水稻的鉴定。Figure 2 shows the identification of OsAGO12 CRISPR/Cas9 transgenic rice.
图3A-图3D为转基因株系的穗的照片和穗长以及分枝数统计结果,具体的,图3A是不同材料水稻穗的照片;图3B是不同材料水稻穗长的统计分析;图3C是不同材料水稻穗初级分枝数的统计分析;图3D是不同材料水稻穗次级分枝数的统计分析。Figures 3A-3D are photographs of the ears of transgenic strains and the statistical results of ear length and branch number. Specifically, Figure 3A is a photograph of rice ears of different materials; Figure 3B is a statistical analysis of the length of rice ears of different materials; Figure 3C is a statistical analysis of the number of primary branches of rice ears of different materials; Figure 3D is a statistical analysis of the number of secondary branches of rice ears of different materials.
图4A-图4E为转基因株系的籽粒照片和籽粒大小统计结果;具体的,图4A是不同材料水稻籽粒宽度的照片。图4B是不同材料水稻籽粒宽度的统计分析;图4C是不同材料水稻籽粒长度的照片;图4D是不同材料水稻籽粒长度的统计分析;图4E是不同材料水稻籽粒千粒重的统计分析。Figures 4A-4E are grain photos and grain size statistics of transgenic lines; specifically, Figure 4A is a photo of the width of rice grains of different materials. Figure 4B is a statistical analysis of the width of rice grains of different materials; Figure 4C is a photo of the length of rice grains of different materials; Figure 4D is a statistical analysis of the length of rice grains of different materials; Figure 4E is a statistical analysis of the thousand-grain weight of rice grains of different materials.
图5A-图5C为转基因株系的籽粒外颖壳细胞照片和外颖壳细胞长度和宽度的统计分析;具体的,图5A为不同材料的籽粒外颖壳细胞的电镜照片。图5B为不同材料的籽粒外颖壳细胞长度的统计分析;图5C为不同材料的籽粒外颖壳细胞宽度的统计分析。Figures 5A-5C are photos of the outer husk cells of the grains of the transgenic lines and statistical analysis of the length and width of the outer husk cells; specifically, Figure 5A is an electron microscope photo of the outer husk cells of the grains of different materials. Figure 5B is a statistical analysis of the length of the outer husk cells of the grains of different materials; Figure 5C is a statistical analysis of the width of the outer husk cells of the grains of different materials.
具体实施方式Detailed ways
下面结合附图和实施例,对本发明作进一步的详细描述。特别指出的是,以下实施例仅用于说明本发明,但不对本发明的范围进行限定。同样的,以下实施例仅为本发明的部分实施例而非全部实施例,本领域普通技术人员在没有作出创造性劳动前提下所获得的所有其它实施例,都属于本发明保护的范围。The present invention will be further described in detail below in conjunction with the accompanying drawings and examples. It is particularly noted that the following examples are only used to illustrate the present invention, but are not intended to limit the scope of the present invention. Similarly, the following examples are only partial embodiments of the present invention rather than all embodiments, and all other embodiments obtained by those of ordinary skill in the art without creative work are within the scope of protection of the present invention.
下述实施例中所用的试验材料,如无特殊说明,均为自常规生化试剂商店购买得到的。以下实施例中的定量试验,均设置三次重复实验,结果取平均值。The test materials used in the following examples, unless otherwise specified, were purchased from conventional biochemical reagent stores. The quantitative tests in the following examples were repeated three times, and the results were averaged.
下述实施例中的pCambia2300-Actin载体全称为pCambia2300-Actin-FLAG植物过表达载体,是实验室自行改造构建。The full name of the pCambia2300-Actin vector in the following examples is pCambia2300-Actin-FLAG plant overexpression vector, which was constructed by the laboratory itself.
下述实施例中的农杆菌EHA105是博迈德生物科技有限公司的产品,产品目录号为BC303。The Agrobacterium EHA105 in the following examples is a product of Bomade Biotechnology Co., Ltd., with a product catalog number of BC303.
下述实施例中的水稻中花11记载于文献许昱等《“中花11”水稻谷蛋白Gt1基因克隆及蜡质基因启动子引导Gt1基因表达载体的构建》,上海师范大学学报(自然科学版),2010年4月第39卷第2期,204页)中,公众可从申请人处获得,该生物材料只为重复本发明的相关实验所用,不可作为其它用途使用。The rice Zhonghua 11 in the following embodiments is recorded in the document "Cloning of the rice glutenin Gt1 gene of "Zhonghua 11" and construction of the wax gene promoter-guided Gt1 gene expression vector", Journal of Shanghai Normal University (Natural Science Edition), Vol. 39, No. 2, April 2010, p. 204), which can be obtained by the public from the applicant. The biological material is only used for repeating the relevant experiments of the present invention and cannot be used for other purposes.
将序列表的序列SEQ ID NO:2所示的蛋白质命名为OsAGO12蛋白。水稻cDNA中,OsAGO12蛋白的编码区如序列表的序列SEQ ID NO:1所示,将其命名为OsAGO12基因。The protein shown in SEQ ID NO: 2 in the sequence list is named as OsAGO12 protein. In rice cDNA, the coding region of OsAGO12 protein is shown in SEQ ID NO: 1 in the sequence list, and it is named as OsAGO12 gene.
实施例1、OsAGO12蛋白及其编码基因的获得Example 1. Obtaining OsAGO12 protein and its encoding gene
根据序列SEQ ID NO:2设计引物,引物序列为:Primers were designed according to the sequence SEQ ID NO: 2, and the primer sequences were:
AGO12-F:5’-ATGTCTTCGCGCGGCGG-3’,SEQ ID NO:3AGO12-F: 5'-ATGTCTTCGCGCGGCGG-3', SEQ ID NO: 3
AGO12-R:5’-TCAGCAGTAGAACATGAACCGCT-3’;SEQ ID NO:4。AGO12-R: 5’-TCAGCAGTAGAACATGAACCGCT-3’; SEQ ID NO: 4.
依照说明书,用Invitrogen公司的TRIzol Reagent提取中花11水稻(Oryzasativa L.japonica cv.Zhonghua 11,许昱等《“中花11”水稻谷蛋白Gt1基因克隆及蜡质基因启动子引导Gt1基因表达载体的构建》,上海师范大学学报(自然科学版),2010年4月第39卷第2期,204页)的总RNA,用该公司的SuperScript II逆转录酶进行逆转录,得到cDNA。逆转录所用引物为16个核苷酸的Oligod(T)引物。According to the instructions, total RNA from Oryza sativa L. japonica cv. Zhonghua 11 rice (Oryza sativa L. japonica cv. Zhonghua 11, Xu Yu et al. "Cloning of the rice glutenin Gt1 gene and construction of the wax gene promoter-guided Gt1 gene expression vector of Zhonghua 11", Journal of Shanghai Normal University (Natural Science Edition), Vol. 39, No. 2, April 2010, p. 204) was extracted with TRIzol Reagent from Invitrogen, and reverse transcription was performed using the company's SuperScript II reverse transcriptase to obtain cDNA. The primer used for reverse transcription was a 16-nucleotide Oligod (T) primer.
以逆转录所得cDNA为模板,以上述基因特异性引物AGO12-F和AGO12-R进行PCR(Polymerase Chain Reaction)反应,得到3177bp的PCR产物,该PCR产物具有序列表中序列SEQ ID NO:2所示的核苷酸。The cDNA obtained by reverse transcription was used as a template and the above-mentioned gene-specific primers AGO12-F and AGO12-R were used for PCR (Polymerase Chain Reaction) reaction to obtain a 3177 bp PCR product having the nucleotide sequence shown in SEQ ID NO: 2 in the sequence table.
回收PCR产物后与载体pEASY-Blunt Zero Cloning Kit(全式金公司,产品目录号:CB501-01)连接,转化大肠杆菌菌株DH5α,得到转化子。提取转化子的质粒送去测序,该质粒为将序列表中序列SEQ ID NO:2所示的基因OsAGO12插入载体pEASY-Blunt得到的载体,将该质粒命名为pCambia2300-Actin-AGO12,即为重组载体。After the PCR product was recovered, it was connected with the vector pEASY-Blunt Zero Cloning Kit (Quanshijin Company, product catalog number: CB501-01) and transformed into Escherichia coli strain DH5α to obtain transformants. The plasmid extracted from the transformant was sent for sequencing. The plasmid was obtained by inserting the gene OsAGO12 shown in the sequence SEQ ID NO: 2 in the sequence table into the vector pEASY-Blunt. The plasmid was named pCambia2300-Actin-AGO12, which is a recombinant vector.
实施例2、OsAGO12过表达水稻的获得Example 2: Obtaining OsAGO12 overexpressing rice
一、表达载体的构建1. Construction of expression vector
以pEASY-Blunt-AGO12为模板,以引物AGO12-5'Sal I(序列为:5’-aggggatcctctagagtcgac ATGTCTTCGCGCGGCGG-3’(SEQ ID NO:5))和AGO12-3’Pst I(序列为:5’-taaagcagggcatgcctgcag TCAGCAGTAGAACATGAACCGCT-3’,(SEQ ID NO:6))进行PCR扩增,得到3177bp的PCR产物。Using pEASY-Blunt-AGO12 as a template, PCR amplification was performed with primers AGO12-5'Sal I (sequence: 5'-aggggatcctctagagtcgac ATGTCTTCGCGCGGCGG-3' (SEQ ID NO: 5)) and AGO12-3'Pst I (sequence: 5'-taaagcagggcatgcctgcag TCAGCAGTAGAACATGAACCGCT-3' (SEQ ID NO: 6)) to obtain a PCR product of 3177 bp.
将上述PCR产物纯化回收,与经过Sal I和Pst I酶切的pCambia2300-Actin-Flag质粒载体骨架通过无缝克隆(参照诺维赞公司,产品目录号:C112-01)的方法连接,得到重组质粒pCambia2300-Actin-FLAGAGO12,经过测序,重组质粒pCambia2300-Actin-FLAGAGO12为将OsAGO12插入pCambia2300-Actin-Flag质粒的Sal I和Pst I酶切位点间得到的载体。The above PCR product was purified and recovered, and connected with the pCambia2300-Actin-Flag plasmid vector backbone digested with Sal I and Pst I by seamless cloning (refer to Novezan, product catalog number: C112-01) to obtain the recombinant plasmid pCambia2300-Actin-FLAGAGO12. After sequencing, the recombinant plasmid pCambia2300-Actin-FLAGAGO12 was a vector obtained by inserting OsAGO12 between the Sal I and Pst I restriction sites of the pCambia2300-Actin-Flag plasmid.
二、过量表达转OsAGO12水稻的获得2. Obtaining transgenic rice overexpressing OsAGO12
1)愈伤组织的诱导培养1) Callus induction culture
中花11水稻(以下也称为野生型水稻)种子去壳,先用70%乙醇浸泡10min,再用0.1%升汞浸泡30min;进行表面除菌。用大量无菌水洗去种子表面的溶液,用无菌滤纸吸去种子表面的水分。将种子置于成熟胚愈伤诱导培养基平板上,用Parafilm膜封闭平皿边缘,于26℃温箱内避光培养。大约15天后,小心取下长出的愈伤组织,转移到成熟胚继代培养基上,同样条件继续进行培养。每两周需进行一次继代培养。用于转化时,需挑选继代培养5天左右、呈淡黄色的颗粒状愈伤组织。The seeds of Zhonghua 11 rice (hereinafter also referred to as wild-type rice) are shelled, first soaked in 70% ethanol for 10 minutes, and then soaked in 0.1% mercuric chloride for 30 minutes; surface sterilization is performed. The solution on the surface of the seeds is washed off with a large amount of sterile water, and the moisture on the surface of the seeds is absorbed with sterile filter paper. The seeds are placed on a mature embryo callus induction medium plate, the edge of the plate is sealed with Parafilm film, and cultured in a 26°C incubator away from light. After about 15 days, the grown callus tissue is carefully removed and transferred to the mature embryo subculture medium, and the culture is continued under the same conditions. Subculture is required every two weeks. When used for transformation, it is necessary to select granular callus tissue that has been subcultured for about 5 days and is light yellow.
2)农杆菌的培养2) Cultivation of Agrobacterium
将pCambia2300-Actin-FLAGAGO12电转入农杆菌EHA105中,得到重组菌EHA105/pCambia2300-Actin-FLAGAGO12。pCambia2300-Actin-FLAGAGO12 was electroporated into Agrobacterium EHA105 to obtain the recombinant bacteria EHA105/pCambia2300-Actin-FLAGAGO12.
将EHA105/pCambia2300-Actin-FLAGAGO12在含有抗生素(50mg/LKanamycin,50mg/L Rifampicin)的LB平板上划线,28℃培养2天。挑取单菌落接入液体LB培养基中,28℃振荡培养至OD600约为0.5,加入乙酰丁香酮至终浓度100mM,得到用于转化水稻愈伤组织的农杆菌悬液。Streak EHA105/pCambia2300-Actin-FLAGAGO12 on an LB plate containing antibiotics (50 mg/L Kanamycin, 50 mg/L Rifampicin) and culture at 28°C for 2 days. Pick a single colony and inoculate it into liquid LB medium, culture it at 28°C with shaking until OD600 is about 0.5, add acetosyringone to a final concentration of 100 mM, and obtain an Agrobacterium suspension for transforming rice callus.
3)水稻愈伤组织与农杆菌的共培养3) Co-culture of rice callus and Agrobacterium
将继代愈伤组织放入灭过菌的锥形瓶中,倒入农杆菌悬液使之浸没愈伤组织。室温放置20min,并不时轻轻晃动使愈伤组织与菌液充分接触。用无菌的镊子轻轻取出愈伤组织,放于无菌滤纸上吸去多余的菌液,转移到铺有一层无菌滤纸的共培养培养基平板上。28℃暗培养3天,得到经过共培养的愈伤组织。Place the subcultured callus in a sterilized conical flask and pour in the Agrobacterium suspension to submerge the callus. Leave at room temperature for 20 minutes and gently shake from time to time to allow the callus to fully contact the bacterial solution. Gently remove the callus with sterile tweezers, place it on a sterile filter paper to absorb the excess bacterial solution, and transfer it to a co-culture medium plate covered with a layer of sterile filter paper. Culture in the dark at 28°C for 3 days to obtain co-cultured callus.
4)抗性愈伤组织的筛选与分化4) Screening and differentiation of resistant callus
将经过共培养的愈伤组织用适量无菌水清洗,除去表面残余的农杆菌,放在筛选培养基上,26℃避光培养进行筛选,两周后转移到新的筛选培养基上继续筛选两周。挑选经过两轮筛选后状态较好的愈伤组织,将其转移到分化培养基平板上,先避光培养3天,然后再转至光照培养箱中(15hr/day)进行光照培养。一个月后可见分化出的小苗。当分化的小苗长至约2cm时,将其转移到锥形瓶中的生根培养基上,继续培养两周左右。选择长势较好、根系发达的小苗,用自来水洗去根部的培养基后移栽入土壤中,收取种子,得到T1代转FLAGAGO12水稻种子,播种得到T1代转FLAGAGO12水稻。The co-cultivated callus was washed with an appropriate amount of sterile water to remove the residual Agrobacterium on the surface, placed on a screening medium, and cultured in the dark at 26°C for screening. After two weeks, it was transferred to a new screening medium and continued to be screened for two weeks. Select the callus in good condition after two rounds of screening, transfer it to a differentiation medium plate, culture it in the dark for 3 days, and then transfer it to a light incubator (15hr/day) for light culture. Differentiated seedlings can be seen after one month. When the differentiated seedlings grow to about 2cm, transfer them to a rooting medium in a conical flask and continue to culture for about two weeks. Select seedlings with good growth and well-developed root systems, wash the culture medium on the roots with tap water, and transplant them into the soil. Collect the seeds to obtain T1 generation FLAGAGO12 rice seeds, and sow them to obtain T1 generation FLAGAGO12 rice.
T1代的水稻种子通过G418初步筛选(pCambia2300载体带有G418抗性筛选基因),发芽的种子,表明载体转入水稻。将发芽的种子种入土中,生长2周后,取0.1g叶片,用液氮磨成粉末。The rice seeds of the T1 generation were preliminarily screened by G418 (the pCambia2300 vector carries the G418 resistance screening gene), and the germinated seeds indicated that the vector was transferred into the rice. The germinated seeds were planted in the soil, and after growing for 2 weeks, 0.1 g of leaves were taken and ground into powder with liquid nitrogen.
OsAGO12过量表达的转基因水稻株系的叶片粉末中加入蛋白提取缓冲液(0.25MTris-HCl,pH6.8,8%SDS,8%β-巯基乙醇,20%甘油)200μl,冰上孵育10min,100℃煮沸10min,4℃,12000rpm离心10min后取上清,进行SDS-PAGE,转膜之后用Western检测。SDS-PAGE及Western Blot依照公知方法及产品说明书进行。所用抗体为anti-FLAG-HRP(sigma),用抗体anti-Actin检测水稻内源Actin蛋白,作为内参。如图1,在120KDa处出现条带者为阳性,表明基因转入且蛋白表达,选择两个株系#4和#19用于之后的抗病分析实验(图1中中花11为野生型水稻,用作负对照)。200 μl of protein extraction buffer (0.25 M Tris-HCl, pH 6.8, 8% SDS, 8% β-mercaptoethanol, 20% glycerol) was added to the leaf powder of the transgenic rice strain with overexpression of OsAGO12, incubated on ice for 10 min, boiled at 100°C for 10 min, centrifuged at 4°C, 12000 rpm for 10 min, and the supernatant was taken for SDS-PAGE. After transfer to the membrane, Western detection was performed. SDS-PAGE and Western Blot were performed according to the known methods and product instructions. The antibody used was anti-FLAG-HRP (sigma), and the endogenous Actin protein of rice was detected with the antibody anti-Actin as an internal reference. As shown in Figure 1, the band at 120 KDa was positive, indicating that the gene was transferred and the protein was expressed. Two strains #4 and #19 were selected for subsequent disease resistance analysis experiments (Zhonghua 11 in Figure 1 is wild-type rice, used as a negative control).
实施例3、OsAGO12 CRISPR/Cas9水稻的获得Example 3. Obtaining OsAGO12 CRISPR/Cas9 rice
一、表达载体的构建1. Construction of expression vector
1)根据网站http://skl.scau.edu.cn/.依据末端序列为NGG的PAM位点,选取靶向OsAGO12编码区N端的20bp特异性靶点序列如下:GCGGCGCGTCGACCCGTAGG;1) According to the website http://skl.scau.edu.cn/. Based on the PAM site with the terminal sequence of NGG, a 20 bp specific target sequence targeting the N-terminus of the OsAGO12 coding region was selected as follows: GCGGCGCGTCGACCCGTAGG;
2)根据靶点的DNA序列设计引物,并在引物两端加上BsaI酶切位点,引物序列为:2) Design primers according to the target DNA sequence and add BsaI restriction sites at both ends of the primers. The primer sequences are:
U-F:CTCCGTTTTACCTGTGGAATCG,SEQ ID NO:7;U-F: CTCCGTTTTACCTGTGGAATCG, SEQ ID NO: 7;
AGO12-gRT1:5’-GCGGCGCGTCGACCCGTAGGgttttagagctagaaat-3’,SEQ ID NO:8;AGO12-gRT1: 5′-GCGGCGCGTCGACCCGTAGGgttttagagctagaaat-3′, SEQ ID NO: 8;
gRNA-R:CGGAGGAAAATTCCATCCAC,SEQ ID NO:9;gRNA-R: CGGAGGAAAATTCCATCCAC, SEQ ID NO: 9;
AGO12-OsU3T1:5’-CCTACGGGTCGACGCGCCGCgccacggatcatctgc-3’,SEQ ID NO:10;AGO12-OsU3T1: 5′-CCTACGGGTCGACGCGCCGCgccacggatcatctgc-3′, SEQ ID NO: 10;
B1’:TTCAGAggtctcTctcgCACTGGAATCGGCAGCAAAGG,SEQ ID NO:11;B1':TTCAGAggtctcTctcgCACTGGAATCGGCAGCAAAGG, SEQ ID NO: 11;
BL:AGCGTGggtctcGaccgGGTCCATCCACTCCAAGCTC,SEQ ID NO:12;BL:AGCGTGggtctcGaccgGGTCCATCCACTCCAAGCTC, SEQ ID NO: 12;
3)以中间载体为模板,分别用U-F/AGO12-OsU3T1,AGO12-gRT1/gRNA-R,B1’/BL三对引物进行三轮PCR扩增,获得带接头的表达盒;3) Using the intermediate vector as a template, three pairs of primers, U-F/AGO12-OsU3T1, AGO12-gRT1/gRNA-R, and B1’/BL, were used for three rounds of PCR amplification to obtain an expression cassette with a linker;
4)扩增结束后将最终产物切胶纯化回收,加入终载体pYLCRISPR/Cas9以及限制性内切酶和T4连接酶,按照一定体系进行边切边连;4) After amplification, the final product is cut and purified, and the final vector pYLCRISPR/Cas9, restriction endonuclease and T4 ligase are added to perform cutting and ligation according to a certain system;
5)转化大肠杆菌菌株DH5α,涂布卡那霉素抗性的培养基得到转化子,提取转化子的质粒送去测序,阳性转化子即为最终重组载体,命名为pYLCRISPR/Cas9-AGO12:sgRNA。5) Transform the Escherichia coli strain DH5α, apply kanamycin-resistant culture medium to obtain transformants, extract the plasmid of the transformants and send them for sequencing. The positive transformants are the final recombinant vector, named pYLCRISPR/Cas9-AGO12:sgRNA.
二、OsAGO12 CRISPR/Cas9水稻的获得2. Obtaining OsAGO12 CRISPR/Cas9 Rice
1)愈伤组织的培养与转化1) Callus culture and transformation
见实施例2、二、1)-4)See Example 2, 2, 1)-4)
2)OsAGO12 CRISPR/Cas9水稻的鉴定2) Identification of OsAGO12 CRISPR/Cas9 rice
OsAGO12 CRISPR/Cas9的转基因水稻株系的叶片粉末用于提取基因组DNA,具体方法参照高效植物基因组DNA提取试剂盒(天根生化科技有限公司,货号:DP350)。之后,以0.5g基因组DNA为模板,引物AGO12-C-F:5’-TCGTCGGCGAGCGGCAAG-3’(SEQ ID NO:13)和引物AGO12-C-R:5’-TTGTCCGCGACTTGCACCAG-3’(SEQ ID NO:14)进行PCR反应,PCR产物直接送测序,然后进行序列比对。如图2所示,DNA测序结果比对显示两个阳性的株系分别命名为ago12#1和ago12#2,其中,ago12#1在OsAGO12编码区第332和333位碱基之间插入一个“A”,ago12#2在OsAGO12编码区第327和333位碱基之间缺失5bp,均造成了OsAGO12氨基酸序列的提前终止,从而使得OsAGO12蛋白缺失。Leaf powder of the transgenic rice lines of OsAGO12 CRISPR/Cas9 was used to extract genomic DNA, and the specific method was referred to the High-Efficiency Plant Genomic DNA Extraction Kit (Tiangen Biochemical Technology Co., Ltd., Cat. No.: DP350). Afterwards, 0.5 g of genomic DNA was used as a template, and primers AGO12-C-F: 5'-TCGTCGGCGAGCGGCAAG-3' (SEQ ID NO: 13) and primer AGO12-C-R: 5'-TTGTCCGCGACTTGCACCAG-3' (SEQ ID NO: 14) were used for PCR reaction. The PCR products were directly sent for sequencing, and then sequence alignment was performed. As shown in Figure 2, the comparison of DNA sequencing results showed that the two positive strains were named ago12#1 and ago12#2, among which ago12#1 inserted an "A" between the 332nd and 333rd bases in the OsAGO12 coding region, and ago12#2 deleted 5bp between the 327th and 333rd bases in the OsAGO12 coding region, both of which caused the premature termination of the OsAGO12 amino acid sequence, resulting in the loss of OsAGO12 protein.
实施例4、转OsAGO12基因水稻的穗长以及分枝情况分析以及籽粒大小分析Example 4. Analysis of panicle length, branching and grain size of transgenic OsAGO12 rice
按生产规范要求将如下供试材料:T3代转OsAGO12基因水稻OE-4株系、T3代转OsAGO12基因水稻OE-19株系、T3代转OsAGO12敲除水稻ago12#1株系、T3代转OsAGO12敲除水稻ago12#2株系和水稻中花11植株(WT)种植于试验场田间,待植株结实且籽粒成熟后收获籽粒,并比较不同供试材料植株收获得到的穗长以及分枝情况以及籽粒宽度、长度和千粒重大小。According to the production specifications, the following test materials: T 3 generation transgenic rice with OsAGO12 gene OE-4 line, T 3 generation transgenic rice with OsAGO12 gene OE-19 line, T 3 generation transgenic rice with OsAGO12 knockout rice ago12#1 line, T 3 generation transgenic rice with OsAGO12 knockout rice ago12#2 line and rice Zhonghua 11 plant (WT) were planted in the experimental field. The grains were harvested after the plants were strong and the grains were mature. The panicle length, branching, grain width, length and 1000-grain weight of plants with different test materials were compared.
结果见图3(A-D)和图4(A-E)。图3A是不同材料水稻穗的照片;图3B是不同材料水稻穗长的统计分析;图3C是不同材料水稻穗初级分枝数的统计分析;图3D是不同材料水稻穗次级分枝数的统计分析;结果表明:转OsAGO12基因水稻穗长、穗的初级分枝数和次级分枝数均显著大于野生型对照,而敲除ago12基因的水稻穗长、穗的初级分枝数和次级分枝数均显著小于野生型对照,说明过表达OsAGO12基因对提高水稻穗发育和分枝有重要作用。图4A是不同材料水稻籽粒宽度的照片;图4B是不同材料水稻籽粒宽度的统计分析;图4C是不同材料水稻籽粒长度的照片;图4D是不同材料水稻籽粒长度的统计分析;图4E是不同材料水稻籽粒千粒重的统计分析。The results are shown in Figures 3 (A-D) and 4 (A-E). Figure 3A is a photo of rice panicles of different materials; Figure 3B is a statistical analysis of the panicle length of rice of different materials; Figure 3C is a statistical analysis of the number of primary branches of rice panicles of different materials; Figure 3D is a statistical analysis of the number of secondary branches of rice panicles of different materials; the results show that the panicle length, the number of primary branches and the number of secondary branches of rice panicles of transgenic OsAGO12 gene rice are significantly greater than those of wild-type controls, while the panicle length, the number of primary branches and the number of secondary branches of rice panicles of ago12 gene knockout rice are significantly less than those of wild-type controls, indicating that overexpression of OsAGO12 gene plays an important role in improving the development and branching of rice panicles. Figure 4A is a photo of rice grain width of different materials; Figure 4B is a statistical analysis of rice grain width of different materials; Figure 4C is a photo of rice grain length of different materials; Figure 4D is a statistical analysis of rice grain length of different materials; Figure 4E is a statistical analysis of thousand-grain weight of rice grains of different materials.
结果表明:转OsAGO12基因水稻籽粒宽度、长宽和千粒重均显著大于野生型对照,而敲除ago12基因的水稻籽粒宽度、长宽和千粒重均显著小于野生型对照,说明过表达OsAGO12基因对提高水稻籽粒大小和千粒重有重要作用。The results showed that the grain width, length, width and 1000-grain weight of the rice with transgenic OsAGO12 gene were significantly greater than those of the wild-type control, while the grain width, length, width and 1000-grain weight of the rice with ago12 gene knockout were significantly smaller than those of the wild-type control, indicating that overexpression of the OsAGO12 gene plays an important role in increasing rice grain size and 1000-grain weight.
实施例5、转OsAGO12基因水稻籽粒外颖壳细胞的电镜观察和分析Example 5: Electron microscopic observation and analysis of hull cells of OsAGO12 transgenic rice grains
按生产规范要求将如下供试材料:T3代转OsAGO12基因水稻OE-4株系、T3代转OsAGO12基因水稻OE-19株系、T3代转OsAGO12敲除水稻ago12#1株系、T3代转OsAGO12敲除水稻ago12#2株系和水稻中花11植株(WT)种植于试验场田间,取水稻幼穗籽粒,用戊二醛交联固定并脱水后从颖壳中间切取10um厚度的样品,通过扫描电镜的技术对外颖壳细胞进行分析,比较不同供试材料植株收获得到的籽粒外颖壳细胞的长度和宽度并进行统计分析。According to the production specifications, the following test materials: T 3 generation transgenic rice with OsAGO12 gene OE-4 line, T 3 generation transgenic rice with OsAGO12 gene OE-19 line, T 3 generation transgenic rice with OsAGO12 knockout rice ago12#1 line, T 3 generation transgenic rice with OsAGO12 knockout rice ago12#2 line and rice Zhonghua 11 plant (WT) were planted in the experimental field. The rice panicle grains were cross-linked, fixed and dehydrated with glutaraldehyde, and then 10 um thick samples were cut from the middle of the husk. The outer husk cells were analyzed by scanning electron microscopy. The length and width of the outer husk cells of the grains harvested from different test material plants were compared and statistical analysis was performed.
结果见图5(A-C)。图5A是不同材料水稻幼穗外颖壳细胞的照片;图5B是不同材料水稻幼穗外颖壳细胞的长度的统计分析;图5C是不同材料水稻幼穗外颖壳细胞的宽度的统计分析;结果表明:转OsAGO12基因水稻籽粒外颖壳细胞的长度均显著大于野生型对照,而敲除ago12基因的水稻籽粒外颖壳细胞的宽度均显著小于野生型对照,说明OsAGO12基因对提高水稻籽粒外颖壳细胞大小具有重要作用。OsAGO12基因可以通过促进水稻籽粒外颖壳细胞的生长,促进水稻种子发育,进而提高水稻种子的大小和千粒重,从而提高水稻的产量。The results are shown in Figure 5 (A-C). Figure 5A is a photo of the outer hull cells of rice panicles of different materials; Figure 5B is a statistical analysis of the length of the outer hull cells of rice panicles of different materials; Figure 5C is a statistical analysis of the width of the outer hull cells of rice panicles of different materials; the results show that the length of the outer hull cells of rice grains transgenic for OsAGO12 gene is significantly greater than that of the wild-type control, while the width of the outer hull cells of rice grains knocked out for ago12 gene is significantly smaller than that of the wild-type control, indicating that the OsAGO12 gene plays an important role in increasing the size of the outer hull cells of rice grains. The OsAGO12 gene can promote the growth of the outer hull cells of rice grains, promote the development of rice seeds, and then increase the size and thousand-grain weight of rice seeds, thereby increasing the yield of rice.
以上所述仅为本发明的部分实施例,并非因此限制本发明的保护范围,凡是利用本发明说明书及附图内容所作的等效装置或等效流程变换,或直接或间接运用在其他相关的技术领域,均同理包括在本发明的专利保护范围内。The above descriptions are only some embodiments of the present invention, and are not intended to limit the protection scope of the present invention. Any equivalent device or equivalent process transformation made using the contents of the present invention specification and drawings, or directly or indirectly applied in other related technical fields, are also included in the patent protection scope of the present invention.
Claims (10)
- Use of an OsAGO12 protein or an OsAGO12 gene encoding the protein or a vector comprising the gene, characterized in that the use is any one of the following M1) -M6):M1) regulating plant yield;m2) regulating plant grain growth and/or grain size;M3) regulating plant ear development and branching;M4) regulating plant grain exome cell size;m5) use in the cultivation of transgenic plants with increased grain size and/or yield;M6) plant breeding;wherein, the OsAGO12 protein is one of the following:a1 Protein with the amino acid sequence shown as SEQ ID NO. 2;a2 A fusion protein obtained by connecting a tag to the N end and/or the C end of an amino acid sequence shown in a sequence table SEQ ID NO. 2;a3 Protein with the same function is obtained by substituting and/or deleting and/or adding one or more amino acid residues in the amino acid sequence shown in the sequence table SEQ ID NO. 2;a4 Protein which has 75% or more homology with the amino acid sequence shown in the sequence table SEQ ID NO. 2 and has the same function;The OsAGO12 gene is one of the following:b1 A cDNA molecule having a nucleotide sequence shown in a sequence table SEQ ID NO. 1;b2 A cDNA molecule or a genomic DNA molecule which has 75% or more identity with the nucleotide sequence shown in SEQ ID No.1 of the sequence table and codes for the OsAGO12 protein;b3 A cDNA molecule or a genomic DNA molecule which hybridizes to the nucleotide sequence defined in b 1) or b 2) and encodes the OsAGO12 protein.
- 2. Use of a biological material comprising an OsAGO12 protein, characterized in that said use is any one of the following M1) -M6):M1) regulating plant yield;m2) regulating plant grain growth and/or grain size;M3) regulating plant ear development and branching;M4) regulating plant grain exome cell size;m5) use in the cultivation of transgenic plants with increased grain size and/or yield;M6) plant breeding;wherein, the OsAGO12 protein is one of the following:a1 Protein with the amino acid sequence shown as SEQ ID NO. 2;a2 A fusion protein obtained by connecting a tag to the N end and/or the C end of an amino acid sequence shown in a sequence table SEQ ID NO. 2;a3 Protein with the same function is obtained by substituting and/or deleting and/or adding one or more amino acid residues in the amino acid sequence shown in the sequence table SEQ ID NO. 2;a4 Protein which has 75% or more homology with the amino acid sequence shown in the sequence table SEQ ID NO. 2 and has the same function.
- 3. The use according to claim 2, wherein the biological material is any one of the following A1) -A8):a1 A nucleic acid molecule encoding an OsAGO12 protein;a2 An expression cassette comprising A1) said nucleic acid molecule;A3 A) a recombinant vector comprising the nucleic acid molecule of A1);A4 A recombinant vector comprising the expression cassette of A2);a5 A) a recombinant microorganism comprising the nucleic acid molecule of A1);a6 A) a recombinant microorganism comprising the expression cassette of A2);A7 A) a recombinant microorganism comprising the recombinant vector of A3);A8 A recombinant microorganism comprising the recombinant vector of A4).
- 4. The use according to claim 3, wherein the nucleic acid molecule of A1) is one of the following:b1 A cDNA molecule having a nucleotide sequence shown in a sequence table SEQ ID NO. 1;b2 A cDNA molecule or a genomic DNA molecule which has 75% or more identity with the nucleotide sequence shown in SEQ ID No.1 of the sequence table and codes for the OsAGO12 protein;b3 A cDNA molecule or a genomic DNA molecule which hybridizes to the nucleotide sequence defined in b 1) or b 2) and encodes the OsAGO12 protein.
- 5. Use according to one of claims 2 to 4, wherein the modulated plant yield in M1) is modulated plant kernel thousand kernel weight;The size of the plant seeds is regulated and controlled in M2) to regulate and control the length and/or width of the plant seeds;M4) is to regulate the length and/or cell width of the plant exotic cells.
- 6. The use according to any one of claims 2 to 4, wherein the plant is a monocotyledonous plant or a dicotyledonous plant;Or, the plant is rice.
- 7. A method of growing a transgenic plant having increased grain size and/or yield comprising: obtaining a target plant with an OsAGO12 protein or an OsAGO12 gene encoding the protein, and increasing the expression level and/or activity of the OsAGO12 protein in the target plant to obtain a transgenic plant;wherein the grain size and/or yield of the transgenic plant is higher than that of the plant of interest.
- 8. The method of claim 7, wherein the transgenic plant has a grain size and/or yield higher than that of the plant of interest as represented by any one of the following N1) -N6):N1) the spike length of the transgenic plant is larger than that of the target plant;n2) the primary branch number of the transgenic plant ear is greater than that of the plant of interest;N3) the secondary branch number of the transgenic plant ear is greater than that of the target plant.N4) the width of the transgenic plant grain is larger than that of the target plant;n5) the length of the transgenic plant grain is greater than that of the plant of interest;n6) thousand kernel weight of the transgenic plant kernel is greater than the plant of interest.
- 9. The method of claim 7, wherein the method for increasing the expression level and/or activity of the OsAGO12 protein in the plant of interest comprises: overexpressing the OsAGO12 protein in the plant of interest;Wherein the over-expression method comprises the following steps: introducing the encoding gene OsAGO12 of the OsAGO12 protein into a target plant;the OsAGO12 gene is a DNA molecule with a nucleotide sequence shown in a sequence table SEQ ID NO. 1.
- 10. The method according to any one of claims 7 to 9, wherein the plant of interest is a monocotyledonous plant or a dicotyledonous plant;Or, the target plant is rice.
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