CN118064475B - A 5-aminolevulinic acid producing strain and its construction method and application - Google Patents
A 5-aminolevulinic acid producing strain and its construction method and application Download PDFInfo
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- ZGXJTSGNIOSYLO-UHFFFAOYSA-N 88755TAZ87 Chemical compound NCC(=O)CCC(O)=O ZGXJTSGNIOSYLO-UHFFFAOYSA-N 0.000 title claims abstract description 67
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- MLYYVTUWGNIJIB-BXKDBHETSA-N cefazolin Chemical compound S1C(C)=NN=C1SCC1=C(C(O)=O)N2C(=O)[C@@H](NC(=O)CN3N=NN=C3)[C@H]2SC1 MLYYVTUWGNIJIB-BXKDBHETSA-N 0.000 claims abstract 3
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Abstract
本发明提供了一种5‑氨基乙酰丙酸生产菌株及其构建方法与应用,所述菌株上调了aceF、 pykF、icd、gdhA、gltx、hemA、hemL、rhtA基因,通过BBa_J23113启动子下调hemB基因,异源表达了来源于Neurospora crassa的NCU05151基因,同时携带了上述高拷贝质粒pETJAL,所述质粒上表达了E.coli W3110的aspC、thrAfbr、thrB、thrC、asd、tdh、itaE基因和来源于Rhodobactersphaeroides的alaS基因;所述菌株实现了5‑氨基乙酰丙酸的高效生产,具有优秀的工业应用前景。
The invention provides a 5-aminolevulinic acid producing strain and a construction method and application thereof. The strain upregulates aceF, pykF, icd, gdhA, gltx, hemA, heml and rhtA genes , downregulates hemB gene through BBa_J23113 promoter, heterologously expresses NCU05151 gene derived from Neurospora crassa , and carries the above-mentioned high-copy plasmid pETJAL, on which aspC, thrA fbr , thrB, thrC, asd, tdh, itaE genes of E.coli W3110 and alaS gene derived from Rhodobactersphaeroides are expressed; the strain realizes efficient production of 5-aminolevulinic acid and has excellent industrial application prospects.
Description
技术领域Technical Field
本发明涉及生物技术与发酵工程技术领域,尤其是一种5-氨基乙酰丙酸生产菌株及其构建方法与应用。The invention relates to the technical field of biotechnology and fermentation engineering, in particular to a 5-aminolevulinic acid producing strain and a construction method and application thereof.
背景技术Background technique
5-氨基乙酰丙酸(C5O3NH9)是一种非蛋白氨基酸,是生物体合成叶绿素、血红素和维生素B12等吡咯类化合物的共同前体物质,广泛存在于微生物和动植物细胞中,在医药、农业、保健、化工等行业具有重要应用。5-Aminolevulinic acid (C5O3NH9) is a non-protein amino acid and a common precursor for organisms to synthesize chlorophyll, heme, vitamin B12 and other pyrrole compounds. It is widely present in microorganisms and animal and plant cells and has important applications in medicine, agriculture, health care, chemical industry and other industries.
目前5-氨基乙酰丙酸合成方法主要为化学合成法和微生物发酵法。化学合成法存在环境污染较大,转化率较低的问题,此方法使用大量的酸碱试剂及有机试剂,存在提取困难、污染严重、价格昂贵等问题,无法满足生产的需求。微生物发酵法是以葡萄糖作为微生物生长的能量来源。然而目前,以葡萄糖为底物微生物合成5-氨基乙酰丙酸,需添加中间物质,生产成本高,发酵周期长,糖转化效率低,并且产量较低,不利于工业化生产。因此,开发一种不添加中间物质,以葡萄糖为底物,廉价、高效生产5-氨基乙酰丙酸基因工程菌具有重要的生产实践价值。At present, the synthesis methods of 5-aminolevulinic acid are mainly chemical synthesis and microbial fermentation. The chemical synthesis method has the problems of large environmental pollution and low conversion rate. This method uses a large amount of acid-base reagents and organic reagents, and has the problems of difficult extraction, serious pollution, and high price, which cannot meet the needs of production. The microbial fermentation method uses glucose as the energy source for microbial growth. However, at present, the synthesis of 5-aminolevulinic acid by microorganisms using glucose as a substrate requires the addition of intermediate substances, high production cost, long fermentation cycle, low sugar conversion efficiency, and low yield, which is not conducive to industrial production. Therefore, it is of great value to develop a genetically engineered bacterium that does not add intermediate substances and uses glucose as a substrate to produce 5-aminolevulinic acid cheaply and efficiently.
发明内容Summary of the invention
本发明所要解决的技术问题在于提供一种5-氨基乙酰丙酸生产菌株。The technical problem to be solved by the present invention is to provide a 5-aminolevulinic acid producing strain.
本发明所要解决的另一技术问题在于提供上述5-氨基乙酰丙酸生产菌株的构建方法。Another technical problem to be solved by the present invention is to provide a method for constructing the above-mentioned 5-aminolevulinic acid producing strain.
本发明所要解决的另一技术问题在于提供上述5-氨基乙酰丙酸生产菌株的应用。Another technical problem to be solved by the present invention is to provide the application of the above-mentioned 5-aminolevulinic acid producing strain.
为解决上述技术问题,本发明的技术方案是:In order to solve the above technical problems, the technical solution of the present invention is:
一种质粒,为质粒pETJAL,由质粒pET28a改造而来,携带有aspC、thrAfbr、thrB、thrC、asd、tdh、itaE基因和来源于Rhodobactersphaeroides的alaS基因,所述质粒pET28a的核苷酸序列如序列表SEQ ID NO.10所示。A plasmid is a plasmid pETJAL, which is transformed from a plasmid pET28a and carries aspC, thrA fbr , thrB, thrC, asd, tdh, itaE genes and an alaS gene derived from Rhodobactersphaeroides . The nucleotide sequence of the plasmid pET28a is shown in SEQ ID NO.10 in the sequence table.
优选的,上述质粒,携带复制起始位点、卡那霉素抗性基因、T7启动子、终止子等质粒元件,同时携带了来源于E.coliW3110(E.coliW3110 ATCC 27325)的aspC、thrAfbr、thrB、thrC、asd、tdh、itaE基因和来源于Rhodobactersphaeroides的alaS基因,均选用T7启动子强化转录。Preferably, the above-mentioned plasmid carries plasmid elements such as a replication start site, a kanamycin resistance gene, a T7 promoter, and a terminator, and also carries aspC, thrA fbr , thrB, thrC, asd, tdh, itaE genes derived from E. coli W3110 (E. coli W3110 ATCC 27325) and an alaS gene derived from Rhodobacters phaeroides , and the T7 promoter is used to enhance transcription.
上述质粒的构建方法,选用南京诺唯赞生物科技股份有限公司的ClonExpress®快速克隆技术进行过表达质粒的构建:The construction method of the above plasmid uses the ClonExpress® rapid cloning technology of Nanjing Novogene Biotech Co., Ltd. to construct the overexpression plasmid:
(1)选取克隆位点,利用反向PCR技术扩增得到pET28a线性载体,利用ClonExpress®重组酶将pET28a线性载体与克隆片段T7-aspC连接得到新的质粒pET-1;(1) Select the cloning site, use the inverse PCR technique to amplify the pET28a linear vector, and use the ClonExpress® recombinase to connect the pET28a linear vector with the cloned fragment T7-aspC to obtain a new plasmid pET-1;
(2)选用相同质粒构建方法将T7启动子启动表达的thrAfbr、thrB、thrC基因构建到质粒pET-1中表达得到pET-2;(2) Using the same plasmid construction method, the thrA fbr , thrB , and thrC genes driven by the T7 promoter were constructed and expressed in the plasmid pET-1 to obtain pET-2;
(3)选用相同质粒构建方法将T7启动子启动表达的asd基因构建到质粒pET-2中表达得到pET-3;(3) Using the same plasmid construction method, the asd gene driven by T7 promoter was constructed into plasmid pET-2 to express pET-3;
(4)选用相同质粒构建方法将T7启动子启动表达的tdh基因构建到质粒pET-3中表达得到pET-4;(4) Using the same plasmid construction method, the tdh gene driven by the T7 promoter was constructed and expressed in the plasmid pET-3 to obtain pET-4;
(5)选用相同质粒构建方法将T7启动子启动表达的itaE基因构建到质粒pET-4中表达得到pET-5;(5) The same plasmid construction method was used to construct the itaE gene driven by the T7 promoter into the plasmid pET-4 to obtain pET-5;
(6)选用相同质粒构建方法将T7启动子启动表达的alaS基因构建到质粒pET-5中表达得到pETJAL。(6) The same plasmid construction method was used to construct the alaS gene driven by the T7 promoter and expressed in the plasmid pET-5 to obtain pETJAL.
一种5-氨基乙酰丙酸生产菌株,为菌株JAL11,上调了aceF、pykF、icd、gdhA、gltx、 hemA、hemL、rhtA基因,通过BBa_J23113启动子下调hemB基因,异源表达了来源于Neurospora crassa的NCU05151基因,同时携带了上述高拷贝质粒pETJAL,所述质粒上表达了E.coli W3110的aspC、thrAfbr、thrB、thrC、asd、tdh、itaE基因和来源于Rhodobactersphaeroides的alaS基因。A 5-aminolevulinic acid producing strain is strain JAL11, which up-regulates aceF, pykF, icd, gdhA, gltx, hemA, heml, and rhtA genes , down-regulates hemB gene through BBa_J23113 promoter, heterologously expresses NCU05151 gene from Neurospora crassa , and carries the above-mentioned high-copy plasmid pETJAL, on which aspC, thrA fbr , thrB, thrC, asd, tdh, itaE genes of E.coli W3110 and alaS gene from Rhodobacter sphaeroides are expressed.
优选的,上述5-氨基乙酰丙酸生产菌株,以E.coliW3110作为底盘菌株,利用BBa_J23113启动子下调hemB基因,并整合在基因组ygaY基因位点;利用trc启动子强化aceF基因,并整合在基因组ylbE基因位点;利用trc启动子强化pykF基因,并整合在基因组gapC基因位点;利用trc启动子强化icd基因,并整合在基因组rph基因位点;利用trc启动子强化gdhA基因,并整合在基因组yeeL基因位点;利用trc启动子强化gltX基因,并整合在基因组ycgH基因位点;利用trc启动子强化hemL基因,并整合在基因组yjgX基因位点;利用trc启动子强化hemA基因,并整合在基因组mbhA基因位点;利用trc启动子强化rhtA基因,并整合在基因组yeeP基因位点;利用trc启动子强化了来源于Neurospora crassa OR74A的NCU05151基因转录,并整合到基因组ycdN基因位点。Preferably, the above-mentioned 5-aminolevulinic acid producing strain uses E.coli W3110 as the chassis strain, uses the BBa_J23113 promoter to down-regulate the hemB gene and integrate it into the ygaY gene site of the genome; uses the trc promoter to strengthen the aceF gene and integrate it into the ylbE gene site of the genome; uses the trc promoter to strengthen the pykF gene and integrate it into the gapC gene site of the genome; uses the trc promoter to strengthen the icd gene and integrate it into the rph gene site of the genome; uses the trc promoter to strengthen the gdhA gene and integrate it into the yeeL gene site of the genome; uses the trc promoter to strengthen the gltX gene and integrate it into the ycgH gene site of the genome; uses the trc promoter to strengthen the heml gene and integrate it into the yjgX gene site of the genome; uses the trc promoter to strengthen the hemA gene and integrate it into the mbhA gene site of the genome; uses the trc promoter to strengthen the rhtA gene and integrate it into the yeeP gene site of the genome; uses the trc promoter to strengthen the gene derived from Neurospora crassa The NCU05151 gene of OR74A is transcribed and integrated into the ycdN gene locus of the genome.
优选的,上述5-氨基乙酰丙酸生产菌株,所述E.coliW3110为E.coliW3110 ATCC27325。Preferably, in the above-mentioned 5-aminolevulinic acid producing strain, the E. coli W3110 is E. coli W3110 ATCC27325.
优选的,上述5-氨基乙酰丙酸生产菌株,所述aceF基因的核苷酸序列如序列表SEQID NO.1所示,pykF基因的核苷酸序列如序列表SEQ ID NO.2所示,icd基因的核苷酸序列如序列表SEQ ID NO.3所示,gdhA基因的核苷酸序列如序列表SEQ ID NO.4所示,gltX基因的核苷酸序列如序列表SEQ ID NO.5所示,hemA基因的核苷酸序列如序列表SEQ ID NO.6所示,hemL基因的核苷酸序列如序列表SEQ ID NO.7所示,rhtA基因的核苷酸序列如序列表SEQ ID NO.8,NCU05151基因的核苷酸序列如序列表SEQ ID NO.9所示,质粒pET28a的核苷酸序列如序列表SEQ ID NO.10所示,trc启动子的核苷酸序列如序列表SEQ ID NO.11所示,BBa_J23113启动子的核苷酸序列如序列表SEQ ID NO.12所示,T7启动子的核苷酸序列如序列表SEQ ID NO.13所示,aspC基因的核苷酸序列如序列表SEQ ID NO.14所示,thrAfbr基因的核苷酸序列如序列表SEQ ID NO.15所示,thrB基因的核苷酸序列如序列表SEQ ID NO.16所示,thrC基因的核苷酸序列如序列表SEQ ID NO.17所示,asd基因的核苷酸序列如序列表SEQ ID NO.18所示,tdh基因的核苷酸序列如序列表SEQ ID NO.19所示,itaE基因的核苷酸序列如序列表SEQ ID NO.20所示,hemB基因的核苷酸序列如序列表SEQ ID NO.21所示,alaS基因的核苷酸序列如序列表SEQ ID NO.22所示。Preferably, in the above-mentioned 5-aminolevulinic acid producing strain, the nucleotide sequence of the aceF gene is shown in SEQ ID NO.1 in the sequence listing, the nucleotide sequence of the pykF gene is shown in SEQ ID NO.2 in the sequence listing, the nucleotide sequence of the icd gene is shown in SEQ ID NO.3 in the sequence listing, the nucleotide sequence of the gdhA gene is shown in SEQ ID NO.4 in the sequence listing, the nucleotide sequence of the gltX gene is shown in SEQ ID NO.5 in the sequence listing, the nucleotide sequence of the hemA gene is shown in SEQ ID NO.6 in the sequence listing, the nucleotide sequence of the hemL gene is shown in SEQ ID NO.7 in the sequence listing, the nucleotide sequence of the rhtA gene is shown in SEQ ID NO.8 in the sequence listing, the nucleotide sequence of the NCU05151 gene is shown in SEQ ID NO.9 in the sequence listing, the nucleotide sequence of the plasmid pET28a is shown in SEQ ID NO.10 in the sequence listing, the nucleotide sequence of the trc promoter is shown in SEQ ID NO.11 in the sequence listing, the nucleotide sequence of the BBa_J23113 promoter is shown in SEQ ID NO.12 in the sequence listing, and the nucleotide sequence of the T7 promoter is shown in SEQ ID NO.13 in the sequence listing. The nucleotide sequence of the aspC gene is shown in SEQ ID NO.13, the nucleotide sequence of the thrA fbr gene is shown in SEQ ID NO.14 in the sequence listing, the nucleotide sequence of the thrB gene is shown in SEQ ID NO.15 in the sequence listing, the nucleotide sequence of the thrC gene is shown in SEQ ID NO.17 in the sequence listing, the nucleotide sequence of the asd gene is shown in SEQ ID NO.18 in the sequence listing, the nucleotide sequence of the tdh gene is shown in SEQ ID NO.19 in the sequence listing, the nucleotide sequence of the itaE gene is shown in SEQ ID NO.20 in the sequence listing, the nucleotide sequence of the hemB gene is shown in SEQ ID NO.21 in the sequence listing, and the nucleotide sequence of the alaS gene is shown in SEQ ID NO.22 in the sequence listing.
上述5-氨基乙酰丙酸生产菌株的构建方法,在出发菌株E.coli W3110基础上进行定向改造,具体步骤如下:The above-mentioned method for constructing a 5-aminolevulinic acid producing strain is to carry out directional transformation based on the starting strain E. coli W3110 , and the specific steps are as follows:
(1)底盘菌改造:强化5-氨基乙酰丙酸C5途径(1) Chassis bacteria modification: Strengthening the 5-aminolevulinic acid C5 pathway
分别利用trc强启动子启动表达aceF、pykF、icd、gdhA、gltx、hemA、hemL以及外转运蛋白rhtA基因,极大地提高了以上基因的转录水平;The strong trc promoter was used to drive the expression of aceF , pykF , icd , gdhA , gltx , hemA , hemL and the external transporter rhtA gene, which greatly increased the transcription level of the above genes;
(2)优化乙酰-CoA供给系统:提高转化率(2) Optimizing the acetyl-CoA supply system: Improving conversion rate
引入来源于Neurospora crassa的NCU05151基因,高效利用碳源产生大量乙酰-CoA,使其流入TCA循环中,为5-氨基乙酰丙酸C5代谢途径和甘氨酸代谢途径提供大量前体,使5-氨基乙酰丙酸积累;The NCU05151 gene from Neurospora crassa was introduced to efficiently utilize carbon sources to produce a large amount of acetyl-CoA, which flows into the TCA cycle, provides a large amount of precursors for the 5-aminolevulinic acid C 5 metabolic pathway and the glycine metabolic pathway, and accumulates 5-aminolevulinic acid.
(3)弱化5-氨基乙酰丙酸分解代谢:(3) Weakening the catabolism of 5-aminolevulinic acid:
利用BBa_J23113启动子下调hemB基因,弱化5-氨基乙酰丙酸的分解代谢,与野生菌相比弱化了45倍,弱化5-氨基乙酰丙酸分解代谢,使5-氨基乙酰丙酸高效积累;The BBa_J23113 promoter was used to down-regulate the hemB gene, weakening the catabolism of 5-aminolevulinic acid by 45 times compared with wild bacteria, weakening the catabolism of 5-aminolevulinic acid and allowing 5-aminolevulinic acid to accumulate efficiently;
(4)pETJAL质粒系统:打通甘氨酸途径(4) pETJAL plasmid system: opening up the glycine pathway
pETJAL质粒携带复制起始位点、卡那霉素抗性基因、T7启动子、终止子等质粒元件,同时携带了来源于E.coli W3110的aspC、thrAfbr、thrB、thrC、asd、tdh、itaE基因和来源于Rhodobactersphaeroides的alaS基因,所述aspC、thrAfbr、thrB、thrC、asd、tdh、itaE、alaS基因均选用T7启动子强化转录;将构建完成的pETJAL质粒电转化至步骤(3)获得的感受态细胞中,即得到菌株JAL11。The pETJAL plasmid carries plasmid elements such as a replication initiation site, a kanamycin resistance gene, a T7 promoter, and a terminator. It also carries aspC, thrA fbr , thrB, thrC, asd, tdh, itaE genes derived from E. coli W3110 and an alaS gene derived from Rhodobacters phaeroides . The aspC, thrA fbr , thrB, thrC, asd, tdh, itaE, and alaS genes are all transcribed using a T7 promoter. The constructed pETJAL plasmid is electroporated into the competent cells obtained in step (3) to obtain strain JAL11.
上述5-氨基乙酰丙酸生产菌株在发酵生产5-氨基乙酰丙酸方面的应用。Application of the above 5-aminolevulinic acid producing strain in fermentation production of 5-aminolevulinic acid.
优选的,上述5-氨基乙酰丙酸生产菌株的应用,所述菌株在培养基中发酵培养,培养基包括但不限于碳源、氮源、无机盐、维生素等;发酵条件包括发酵温度、发酵pH、发酵溶氧条件、发酵压力、发酵时间等。Preferably, the above-mentioned 5-aminolevulinic acid producing strain is used, and the strain is fermented and cultured in a culture medium, and the culture medium includes but is not limited to a carbon source, a nitrogen source, an inorganic salt, vitamins, etc.; the fermentation conditions include fermentation temperature, fermentation pH, fermentation dissolved oxygen conditions, fermentation pressure, fermentation time, etc.
优选的,上述5-氨基乙酰丙酸生产菌株的应用,具体步骤如下:Preferably, the application of the above-mentioned 5-aminolevulinic acid producing strain comprises the following specific steps:
①斜面培养:取5-氨基乙酰丙酸生产菌株接种在斜面培养基上,32-35℃培养12-16h,斜面培养基为通用LB固体培养基;① Slant culture: inoculate the 5-aminolevulinic acid producing strain on a slant medium and culture at 32-35°C for 12-16 hours. The slant medium is a general LB solid medium.
②摇瓶种子培养:取固体斜面菌种接种至摇瓶培养基中进行发酵,培养温度32-35℃,培养时间12-20h,摇床转速200-240r/min,pH6.4-6.7;② Shake flask seed culture: Take the solid slant bacteria and inoculate them into the shake flask medium for fermentation. The culture temperature is 32-35℃, the culture time is 12-20h, the shaker speed is 200-240r/min, and the pH is 6.4-6.7;
③摇瓶发酵培养:发酵接种量为15-20%,培养温度为32-35℃,pH在6.4-6.7,培养时间24-36h,摇床转速200-240r/min。③ Shake flask fermentation culture: the fermentation inoculation amount is 15-20%, the culture temperature is 32-35℃, the pH is 6.4-6.7, the culture time is 24-36h, and the shaking speed is 200-240r/min.
优选的,上述5-氨基乙酰丙酸生产菌株的应用,所述步骤②中采用的种子培养基为:葡萄糖25 g/L,酵母3.5 g/L,蛋白胨1.3g/L,(NH4)2SO41 g/L,K2HPO4·3H2O 2 g/L,MgSO4·7H2O 2 g/L,柠檬酸1.5 g/L,MnSO4·H2O 5 mg/L,微量元素2 mg/L,其余为水。Preferably, in the application of the above-mentioned 5-aminolevulinic acid producing strain, the seed culture medium used in the step ② is: 25 g/L glucose, 3.5 g/L yeast, 1.3 g/L peptone, 1 g/L (NH 4 ) 2 SO 4 , 2 g/L K 2 HPO 4 ·3H 2 O , 2 g/L MgSO 4 ·7H 2 O 2 g/L, 1.5 g/L citric acid, 5 mg/L MnSO 4 ·H 2 O, 2 mg/L trace elements, and the rest is water.
优选的,上述5-氨基乙酰丙酸生产菌株的应用,所述步骤③采用的发酵培养基为:葡萄糖15 g/L,酵母粉3 g/L,蛋白胨1 g/L,(NH4)2SO42 g/L,K2HPO4·3H2O 5 g/L,MgSO4·7H2O 2 g/L,MnSO4·H2O 10 mg/L,FeSO4·7H2O 30 mg/L,微量元素2 mg/L,其余为水。Preferably, in the application of the above-mentioned 5-aminolevulinic acid producing strain, the fermentation medium used in step ③ is: 15 g/L glucose, 3 g/L yeast powder, 1 g/L peptone, 2 g/L (NH4) 2 SO 4 , 5 g/L K 2 HPO 4 ·3H 2 O, 2 g/L MgSO 4 ·7H 2 O, 10 mg/L MnSO 4 ·H 2 O, 30 mg/L FeSO 4 ·7H 2 O, 2 mg/L trace elements, and the rest is water.
优选的,上述5-氨基乙酰丙酸生产菌株的应用,所述微量元素为硼酸5mg/L,CoCl2.6,H2O 2.2mg/L,MnSO4·H2O 0.4mg/L,CuSO4·7H2O 0.6mg/L,ZnSO4·7H2O 0.6mg/L,上述成分称量固体后溶解于1L水中,在4℃保存。Preferably, in the application of the above-mentioned 5-aminolevulinic acid producing strain, the trace elements are 5 mg/L boric acid, 2.6 CoCl, 2.2 mg / L H2O , 0.4 mg/L MnSO4 ·H2O, 0.6 mg/L CuSO4·7H2O , and 0.6 mg/L ZnSO4 ·7H2O. The above-mentioned solid components are weighed and dissolved in 1 L of water and stored at 4°C.
上述培养基均可采用标准方法制备获得。The above culture media can be prepared by standard methods.
有益效果:Beneficial effects:
上述5-氨基乙酰丙酸生产菌株,具有良好的5-氨基乙酰丙酸合成能力,性能稳定,产酸效率高,上调了aceF、pykF、icd、gdhA、gltx、hemA、hemL、rhtA基因,通过启动子下调hemB基因,异源表达了来源于Neurospora crassa的NCU05151基因,同时携带了质粒pETJAL,所述质粒上使用T7启动子表达了来源于E.coli W3110的aspC、thrAfbr、thrB、thrC、asd、tdh、itaE基因过表达并异源表达了来源于Rhodobactersphaeroides的alaS基因,所述菌株磷酸转酮酶来源于Neurospora crassa的NCU05151基因高效生产乙酰-CoA进入TCA循环,减少碳源流失,增强C5途径,并将甘氨酸途径关键酶利用高稳定性的质粒系统表达,打通甘氨酸途径,使5-氨基乙酰丙酸的C5代谢途径和甘氨酸代谢途径同时在工程菌中发挥作用,使5-氨基乙酰丙酸高效积累,能够有效提高5-氨基乙酰丙酸合成效率,提高5-氨基乙酰丙酸生产水平,实现了5-氨基乙酰丙酸的高效生产,具有优秀的工业应用前景。具体来说:The 5-aminolevulinic acid producing strain has good 5-aminolevulinic acid synthesis ability, stable performance, high acid production efficiency, up-regulated aceF, pykF, icd, gdhA, gltx, hemA, heml, rhtA genes , down-regulated hemB gene through promoter, heterologously expressed NCU05151 gene derived from Neurospora crassa , and carried plasmid pETJAL at the same time, on which T7 promoter was used to express aspC, thrA fbr , thrB, thrC, asd, tdh, itaE genes derived from E. coli W3110, and heterologously expressed alaS gene derived from Rhodobacters phaeroides , and the phosphoketolase of the strain was derived from NCU05151 gene of Neurospora crassa, which efficiently produced acetyl-CoA to enter the TCA cycle, reduced carbon source loss, and enhanced C 5 pathway, and the key enzymes of the glycine pathway are expressed using a highly stable plasmid system, opening up the glycine pathway, allowing the C 5 metabolic pathway of 5-aminolevulinic acid and the glycine metabolic pathway to play a role in the engineered bacteria at the same time, so that 5-aminolevulinic acid can be efficiently accumulated, which can effectively improve the synthesis efficiency of 5-aminolevulinic acid and the production level of 5-aminolevulinic acid, and realize the efficient production of 5-aminolevulinic acid, which has excellent industrial application prospects. Specifically:
(1)通过提高aceF、pykF基因的转录水平,有效增加乙酰-CoA进入TCA循环,通过提高icd基因的转录水平,有效增加ɑ-酮戊二酸积累,通过提高gdhA、gltx、hemL、hemA基因的转录水平,增强C5途径使5-氨基乙酰丙酸高效积累;通过提高rhtA基因的转录水平,增强5-氨基乙酰丙酸向细胞外运输水平;(1) By increasing the transcription level of aceF and pykF genes, acetyl-CoA can be effectively increased to enter the TCA cycle; by increasing the transcription level of icd gene, α-ketoglutarate accumulation can be effectively increased; by increasing the transcription level of gdhA, gltx, heml, and hemA genes, the C5 pathway is enhanced to enable efficient accumulation of 5-aminolevulinic acid; by increasing the transcription level of rhtA gene, the level of 5-aminolevulinic acid transport outside the cell is enhanced;
(2)使用pETJAL质粒,质粒上自带的T7启动子过表达来源于E.coli W3110的aspC、thrAfbr、thrB、thrC、asd、tdh、ltaE基因和来源于Rhodobactersphaeroides的alaS基因,打通甘氨酸途径使5-氨基乙酰丙酸高效积累;(2) Using the pETJAL plasmid, the T7 promoter on the plasmid overexpressed the aspC, thrA fbr , thrB, thrC, asd, tdh, ltaE genes from E. coli W3110 and the alaS gene from Rhodobacters phaeroides, opening up the glycine pathway and allowing efficient accumulation of 5-aminolevulinic acid;
(3)应用CRISPR-Cas9基因编辑技术打通5-氨基乙酰丙酸的C5代谢途径,构建pETJAL质粒打通5-氨基乙酰丙酸的甘氨酸代谢途径,C5代谢途径和甘氨酸代谢途径同时在工程菌中发挥作用,使5-氨基乙酰丙酸高效积累;(3) CRISPR-Cas9 gene editing technology was used to open up the C5 metabolic pathway of 5-aminolevulinic acid, and the pETJAL plasmid was constructed to open up the glycine metabolic pathway of 5-aminolevulinic acid. The C5 metabolic pathway and the glycine metabolic pathway functioned simultaneously in the engineered bacteria, resulting in efficient accumulation of 5-aminolevulinic acid.
(4)引入来源于Neurospora crassa的NCU05151基因,磷酸转酮酶将六磷酸果糖高效分解为乙酰-CoA,减少碳源流失,为5-氨基乙酰丙酸C5代谢途径和甘氨酸代谢途径提供大量前体,达到5-氨基乙酰丙酸积累的目的。(4) The NCU05151 gene from Neurospora crassa was introduced. Phosphoketolase efficiently decomposes fructose hexaphosphate into acetyl-CoA, reducing carbon source loss and providing a large amount of precursors for the 5 -aminolevulinic acid C5 metabolic pathway and the glycine metabolic pathway, thereby achieving the purpose of 5-aminolevulinic acid accumulation.
附图说明BRIEF DESCRIPTION OF THE DRAWINGS
图1为质粒pET28a结构示意图。Figure 1 is a schematic diagram of the structure of plasmid pET28a.
图2为质粒pETJAL结构示意图。Figure 2 is a schematic diagram of the structure of plasmid pETJAL.
图3为5-氨基乙酰丙酸基因工程菌从头合成途径改造过程图。FIG. 3 is a diagram showing the process of transforming the de novo synthesis pathway of 5-aminolevulinic acid genetically engineered bacteria.
具体实施方式Detailed ways
为了使本领域的技术人员更好的理解本发明的技术方案,下面结合具体实施方式对本发明所述技术方案作进一步的详细说明。In order to enable those skilled in the art to better understand the technical solution of the present invention, the technical solution of the present invention is further described in detail below in conjunction with specific implementation methods.
实施例中涉及到的百分号“%”,若未特别说明,指质量百分比,溶液的百分比指100mL中含有溶质的克数,液体之间的百分比,是指在25℃时溶液的体积比例。The percentage sign "%" involved in the examples, unless otherwise specified, refers to mass percentage. The percentage of a solution refers to the number of grams of a solute contained in 100 mL. The percentage between liquids refers to the volume ratio of the solution at 25°C.
实施例中所用的出发菌株为野生型E.coliW3110ATCC 27325(市售),相应启动子和基因等见序列表。涉及到的菌株构建过程中用到的引物见表1。The starting strain used in the examples is wild-type E. coli W3110ATCC 27325 (commercially available), and the corresponding promoters and genes are shown in the sequence table. The primers used in the construction of the strains involved are shown in Table 1.
表1菌株构建过程中所涉及的引物Table 1 Primers involved in strain construction
如图3所示,通过下述4个模块构建5-氨基乙酰丙酸生产菌株:As shown in FIG3 , a 5-aminolevulinic acid producing strain was constructed by the following four modules:
(1)底盘菌改造:(1) Chassis bacteria transformation:
提高aceF基因的转录水平,提高pykF基因的转录水平,提高icd基因的转录水平,提高gdhA基因的转录水平,提高gltx基因的转录水平,提高hemA基因的转录水平,提高hemL基因的转录水平,提高外转运蛋白rhtA基因的转录水平。Increase the transcription level of the aceF gene, increase the transcription level of the pykF gene, increase the transcription level of the icd gene, increase the transcription level of the gdhA gene, increase the transcription level of the gltx gene, increase the transcription level of the hemA gene, increase the transcription level of the heML gene, and increase the transcription level of the external transport protein rhtA gene.
(2)优化乙酰-CoA供给系统:(2) Optimizing the acetyl-CoA supply system:
引入来源于Neurospora crassa的NCU05151基因,后者能够高效利用碳源产生大量乙酰-CoA,使其流入TCA循环中,为5-氨基乙酰丙酸C5代谢途径和甘氨酸代谢途径提供大量前体,使5-氨基乙酰丙酸积累。The NCU05151 gene from Neurospora crassa was introduced, which can efficiently utilize carbon sources to produce a large amount of acetyl-CoA, which flows into the TCA cycle, providing a large amount of precursors for the 5 -aminolevulinic acid C5 metabolic pathway and the glycine metabolic pathway, thereby accumulating 5-aminolevulinic acid.
(3)弱化5-氨基乙酰丙酸分解代谢:(3) Weakening the catabolism of 5-aminolevulinic acid:
利用BBa_J23113启动子下调hemB基因,弱化5-氨基乙酰丙酸的分解代谢,使5-氨基乙酰丙酸积累。The BBa_J23113 promoter was used to downregulate the hemB gene, weakening the catabolism of 5-aminolevulinic acid and causing its accumulation.
(4)pETJAL质粒(如图2所示,特别指出,除本发明中特别提及的质粒元件,图谱中所示其他元件均可由现已知任意同等效果元件替代)系统:(4) pETJAL plasmid (as shown in FIG. 2 , it is particularly noted that, except for the plasmid elements specifically mentioned in the present invention, the other elements shown in the diagram can be replaced by any currently known elements with equivalent effects) system:
由质粒pET28a(如图1所示)改造而来,pETJAL质粒携带复制起始位点、卡那霉素抗性基因、T7启动子、终止子等质粒元件,同时携带了来源于E.coli W3110的aspC、thrAfbr、thrB、thrC、asd、tdh、itaE基因和来源于Rhodobactersphaeroides的alaS基因,所述aspC、thrAfbr、thrB、thrC、asd、tdh、itaE、alaS基因均选用T7启动子强化转录。The pETJAL plasmid is transformed from the plasmid pET28a (as shown in FIG. 1 ), and carries plasmid elements such as a replication initiation site, a kanamycin resistance gene, a T7 promoter, and a terminator. It also carries aspC, thrA fbr , thrB, thrC, asd, tdh, itaE genes derived from E. coli W3110 and an alaS gene derived from Rhodobacters phaeroides . The aspC, thrA fbr , thrB, thrC, asd, tdh, itaE, and alaS genes are all transcribed using a T7 promoter.
上述基因操作采用的基因编辑方法参照文献(Li Y,Lin Z,Huang C,et al.Metabolic engineering of Escherichia coli using CRISPR-Cas9 meditated genomeediting. Metabolic Engineering,2015,31:13-21.),本发明涉及到的专业名词,若无特别备注,均可在该文章中得到解释。“引入”是指将外源基因与启动子、终止子连接后插入到工程菌基因组中。The gene editing method used in the above gene manipulation is referred to in the literature (Li Y, Lin Z, Huang C, et al. Metabolic engineering of Escherichia coli using CRISPR-Cas9 meditated genomeediting. Metabolic Engineering, 2015, 31: 13-21.). The professional terms involved in the present invention can be explained in the article unless otherwise noted. "Introduction" refers to the insertion of exogenous genes into the genome of engineered bacteria after connecting them to promoters and terminators.
实施例1Example 1
本实施例旨在说明菌株JAL11的具体构建步骤。特别的,实施例中若有同类型基因操作方法,则仅提供1次,并做注释,不再多加赘述。This example is intended to illustrate the specific construction steps of strain JAL11. In particular, if there is a method for the same type of gene manipulation in the example, it will only be provided once and annotated without further elaboration.
①在ygaY假基因位点使用BBa_J23113启动子下调hemB基因:以E.coli W3110基因组为模板,分别以ygaY-US、ygaY-UA和ygaY-DS、ygaY-DA,通过pcr扩增得到上、下游同源臂,接着,以上下游同源臂为模板,以hemB-S、hemB-A为引物,通过重叠pcr扩增得到重叠片段;以pGRB-ygaY-s、pGRB-ygaY-a为引物,退火得到gRNA片段,并将其与pGRB载体连接,得到ygaY-pGRB;制备E.coli W3110电转化感受态细胞,将重叠片段与ygaY-pGRB一同电转化进入感受态细胞,并筛选得到阳性转化子,获得菌株JAL1。① Use BBa_J23113 promoter to downregulate hemB gene at the ygaY pseudogene site: Using E.coli W3110 genome as template, ygaY-US, ygaY-UA and ygaY-DS, ygaY-DA were used to obtain upstream and downstream homology arms by PCR amplification, then, using the upstream and downstream homology arms as templates and hemB -S and hemB -A as primers, overlapping fragments were obtained by overlapping PCR amplification; pGRB-ygaY-s and pGRB-ygaY-a were used as primers to anneal the gRNA fragments, which were connected with the pGRB vector to obtain ygaY-pGRB; E.coli W3110 electroporation competent cells were prepared, the overlapping fragments and ygaY-pGRB were electroporated into the competent cells, and positive transformants were screened to obtain strain JAL1.
②在ylbE假基因位点使用trc启动子控制aceF基因过表达:以E.coli W3110基因组为模板,分别以ylbE-US、ylbE-UA和ylbE-DS、ylbE-DA,通过pcr扩增得到上、下游同源臂,接着,以上下游同源臂为模板,以aceF-S、aceF-A为引物,通过重叠pcr扩增得到重叠片段;以pGRB-ylbE-s、pGRB-ylbE-a为引物,退火得到gRNA片段,并将其与pGRB载体连接,得到ylbE-pGRB;制备E.coli W3110电转化感受态细胞,将重叠片段与ylbE-pGRB一同电转化进入感受态细胞,并筛选得到阳性转化子,获得菌株JAL2。②Use trc promoter to control overexpression of aceF gene at the ylbE pseudogene site: Using E.coli W3110 genome as template, ylbE-US, ylbE-UA and ylbE-DS, ylbE-DA were used to obtain upstream and downstream homology arms by PCR amplification, then, using upstream and downstream homology arms as templates and aceF-S and aceF-A as primers, overlapping fragments were obtained by overlapping PCR amplification; pGRB-ylbE-s and pGRB-ylbE-a were used as primers to anneal gRNA fragments, which were connected with pGRB vector to obtain ylbE-pGRB; E.coli W3110 electroporation competent cells were prepared, the overlapping fragments and ylbE-pGRB were electroporated into competent cells, and positive transformants were screened to obtain strain JAL2.
③在gapC假基因位点使用trc启动子控制pykF基因过表达:以E.coli W3110基因组为模板,分别以gapC-US、gapC-UA和gapC-DS、gapC-DA,通过pcr扩增得到上、下游同源臂,接着,以上下游同源臂为模板,以pykF-S、pykF-A为引物,通过重叠pcr扩增得到重叠片段;以pGRB-gapC-s、pGRB-gapC-a为引物,退火得到gRNA片段,并将其与pGRB载体连接,得到gapC-pGRB;制备E.coli W3110电转化感受态细胞,将重叠片段与gapC-pGRB一同电转化进入感受态细胞,并筛选得到阳性转化子,获得菌株JAL3。③ Use trc promoter to control overexpression of pykF gene at gapC pseudogene site: Using E.coli W3110 genome as template, gapC-US, gapC-UA and gapC-DS, gapC-DA were used to obtain upstream and downstream homology arms by PCR amplification, then, using upstream and downstream homology arms as templates and pykF-S and pykF-A as primers, overlapping fragments were obtained by overlapping PCR amplification; pGRB-gapC-s and pGRB-gapC-a were used as primers to anneal gRNA fragments, which were connected with pGRB vector to obtain gapC-pGRB; E.coli W3110 electroporation competent cells were prepared, the overlapping fragments and gapC-pGRB were electroporated into competent cells, and positive transformants were screened to obtain strain JAL3.
④在rph假基因位点使用trc启动子控制icd基因过表达:以E.coli W3110基因组为模板,分别以rph-US、rph-UA和rph-DS、rph-DA,通过pcr扩增得到上、下游同源臂,接着,以上下游同源臂为模板,以icd-S、icd-A为引物,通过重叠pcr扩增得到重叠片段;以pGRB-rph-s、pGRB-rph-a为引物,退火得到gRNA片段,并将其与pGRB载体连接,得到rph-pGRB;制备E.coli W3110电转化感受态细胞,将重叠片段与rph-pGRB一同电转化进入感受态细胞,并筛选得到阳性转化子,获得菌株JAL4。④ Use trc promoter to control icd gene overexpression at rph pseudogene site: Using E.coli W3110 genome as template, rph-US, rph-UA and rph-DS, rph-DA were used to obtain upstream and downstream homology arms by PCR amplification, then, using upstream and downstream homology arms as templates and icd-S and icd-A as primers, overlapping fragments were obtained by overlapping PCR amplification; pGRB-rph-s and pGRB-rph-a were used as primers to anneal gRNA fragments, and they were connected with pGRB vector to obtain rph-pGRB; E.coli W3110 electroporation competent cells were prepared, the overlapping fragments and rph-pGRB were electroporated into competent cells, and positive transformants were screened to obtain strain JAL4.
⑤在yeeL假基因位点使用trc启动子控制gdhA基因过表达:以E.coli W3110基因组为模板,分别以yeeL-US、yeeL-UA和yeeL-DS、yeeL-DA,通过pcr扩增得到上、下游同源臂,接着,以上下游同源臂为模板,以gdhA-S、gdhA-A为引物,通过重叠pcr扩增得到重叠片段;以pGRB-yeeL-s、pGRB-yeeL-a为引物,退火得到gRNA片段,并将其与pGRB载体连接,得到yeeL-pGRB;制备E.coli W3110电转化感受态细胞,将重叠片段与yeeL-pGRB一同电转化进入感受态细胞,并筛选得到阳性转化子,获得菌株JAL5。⑤ Use trc promoter to control gdhA gene overexpression at the yeeL pseudogene site: Using E.coli W3110 genome as template, yeeL-US, yeeL-UA and yeeL-DS, yeeL-DA were used to obtain upstream and downstream homology arms by PCR amplification, then, using the upstream and downstream homology arms as templates and gdhA-S and gdhA-A as primers, overlapping fragments were obtained by overlapping PCR amplification; pGRB-yeeL-s and pGRB-yeeL-a were used as primers to anneal the gRNA fragments, and they were connected with the pGRB vector to obtain yeeL-pGRB; E.coli W3110 electroporation competent cells were prepared, the overlapping fragments and yeeL-pGRB were electroporated into the competent cells, and the positive transformants were screened to obtain strain JAL5.
⑥在ychH假基因位点使用trc启动子控制gltX基因过表达:以E.coli W3110基因组为模板,分别以ychH-US、ychH-UA和ychH-DS、ychH-DA,通过pcr扩增得到上、下游同源臂,接着,以上下游同源臂为模板,以gltX-S、gltX-A为引物,通过重叠pcr扩增得到重叠片段;以pGRB-ychH-s、pGRB-ychH-a为引物,退火得到gRNA片段,并将其与pGRB载体连接,得到ychH-pGRB;制备E.coli W3110电转化感受态细胞,将重叠片段与ychH-pGRB一同电转化进入感受态细胞,并筛选得到阳性转化子,获得菌株JAL6。⑥ Use trc promoter to control gltX gene overexpression at ychH pseudogene site: Using E.coli W3110 genome as template, ychH-US, ychH-UA and ychH-DS, ychH-DA were used to obtain upstream and downstream homology arms by PCR amplification, then, using upstream and downstream homology arms as templates and gltX-S and gltX-A as primers, overlapping fragments were obtained by overlapping PCR amplification; pGRB-ychH-s and pGRB-ychH-a were used as primers to anneal gRNA fragments, which were connected with pGRB vector to obtain ychH-pGRB; E.coli W3110 electroporation competent cells were prepared, the overlapping fragments and ychH-pGRB were electroporated into competent cells, and positive transformants were screened to obtain strain JAL6.
⑦在yjgX假基因位点使用trc启动子控制hemL基因过表达:以E.coli W3110基因组为模板,分别以yjgX-US、yjgX-UA和yjgX-DS、yjgX-DA,通过pcr扩增得到上、下游同源臂,接着,以上下游同源臂为模板,以hemL-S、hemL-A为引物,通过重叠pcr扩增得到重叠片段;以pGRB-yjgX-s、pGRB-yjgX-a为引物,退火得到gRNA片段,并将其与pGRB载体连接,得到yjgX-pGRB;制备E.coli W3110电转化感受态细胞,将重叠片段与yjgX-pGRB一同电转化进入感受态细胞,并筛选得到阳性转化子,获得菌株JAL7。⑦ Use trc promoter to control heml gene overexpression at the yjgX pseudogene site: Using E.coli W3110 genome as template, yjgX-US, yjgX-UA and yjgX-DS, yjgX-DA were used to obtain upstream and downstream homology arms by PCR amplification, then, using upstream and downstream homology arms as templates and heml-S and heml-A as primers, overlapping fragments were obtained by overlapping PCR amplification; pGRB-yjgX-s and pGRB-yjgX-a were used as primers to anneal the gRNA fragments, which were connected with the pGRB vector to obtain yjgX-pGRB; E.coli W3110 electroporation competent cells were prepared, the overlapping fragments and yjgX-pGRB were electroporated into the competent cells, and the positive transformants were screened to obtain strain JAL7.
⑧在mbhA假基因位点使用trc启动子控制hemA基因过表达:以E.coli W3110基因组为模板,分别以mbhA-US、mbhA-UA和mbhA-DS、mbhA-DA,通过pcr扩增得到上、下游同源臂,接着,以上下游同源臂为模板,以hemA-S、hemA-A为引物,通过重叠pcr扩增得到重叠片段;以pGRB-mbhA-s、pGRB-mbhA-a为引物,退火得到gRNA片段,并将其与pGRB载体连接,得到mbhA-pGRB;制备E.coli W3110电转化感受态细胞,将重叠片段与mbhA-pGRB一同电转化进入感受态细胞,并筛选得到阳性转化子,获得菌株JAL8。⑧Use trc promoter to control overexpression of hemA gene at mbhA pseudogene site: Using E.coli W3110 genome as template, mbhA-US, mbhA-UA and mbhA-DS, mbhA-DA were used to obtain upstream and downstream homology arms by PCR amplification, then, using upstream and downstream homology arms as templates and hemA-S and hemA-A as primers, overlapping fragments were obtained by overlapping PCR amplification; pGRB-mbhA-s and pGRB-mbhA-a were used as primers to anneal gRNA fragments, and they were connected with pGRB vector to obtain mbhA-pGRB; E.coli W3110 electroporation competent cells were prepared, the overlapping fragments and mbhA-pGRB were electroporated into competent cells, and positive transformants were screened to obtain strain JAL8.
⑨在yeeP假基因位点使用trc启动子控制rhtA基因过表达:以E.coli W3110基因组为模板,分别以yeeP-US、yeeP-UA和yeeP-DS、yeeP-DA,通过pcr扩增得到上、下游同源臂,接着,以上下游同源臂为模板,以rhtA-S、rhtA-A为引物,通过重叠pcr扩增得到重叠片段;以pGRB-yeeP-s、pGRB-yeeP-a为引物,退火得到gRNA片段,并将其与pGRB载体连接,得到yeeP-pGRB;制备E.coli W3110电转化感受态细胞,将重叠片段与yeeP-pGRB一同电转化进入感受态细胞,并筛选得到阳性转化子,获得菌株JAL9。⑨ Use the trc promoter to control the overexpression of the rhtA gene at the yeeP pseudogene site: Using the E.coli W3110 genome as a template, yeeP-US, yeeP-UA and yeeP-DS, yeeP-DA were used to obtain the upstream and downstream homology arms by PCR amplification, and then, using the upstream and downstream homology arms as templates and rhtA-S and rhtA-A as primers, overlapping fragments were amplified by overlapping PCR; using pGRB-yeeP-s and pGRB-yeeP-a as primers, annealing obtained the gRNA fragment, and connected it with the pGRB vector to obtain yeeP-pGRB; prepare E.coli W3110 electroporation competent cells, electroporate the overlapping fragments together with yeeP-pGRB into the competent cells, and screen to obtain positive transformants to obtain strain JAL9.
⑩在ycdN假基因位点使用trc启动子控制NCU05151基因过表达:以E.coli W3110基因组为模板,分别以ycdN-US、ycdN-UA和ycdN-DS、ycdN-DA,通过pcr扩增得到上、下游同源臂,接着,以上下游同源臂为模板,以NCU05151-S、NCU05151-A为引物,通过重叠pcr扩增得到重叠片段;以pGRB-ycdN-S、pGRB-ycdN-A为引物,退火得到gRNA片段,并将其与pGRB载体连接,得到ycdN-pGRB;制备E.coli W3110电转化感受态细胞,将重叠片段与ycdN-pGRB一同电转化进入感受态细胞,并筛选得到阳性转化子,获得菌株JAL10。⑩ Use the trc promoter to control the overexpression of the NCU05151 gene at the ycdN pseudogene site: Using the E. coli W3110 genome as a template, ycdN-US, ycdN-UA and ycdN-DS, ycdN-DA were used to obtain the upstream and downstream homology arms by PCR amplification, then, using the upstream and downstream homology arms as templates and NCU05151-S and NCU05151-A as primers, overlapping fragments were obtained by overlapping PCR amplification; pGRB-ycdN-S and pGRB-ycdN-A were used as primers to anneal the gRNA fragments, and they were connected with the pGRB vector to obtain ycdN-pGRB; E. coli W3110 electroporation competent cells were prepared, the overlapping fragments and ycdN-pGRB were electroporated into the competent cells, and the positive transformants were screened to obtain the strain JAL10.
⑪转化质粒pETJAL得到工程菌JAL11:将完整质粒pETJAL转化进入JAL10感受态细胞,转化方法为电转化(也可以是化学转化等方法)得到工程菌JAL11。⑪Transform the plasmid pETJAL to obtain the engineered bacterium JAL11: Transform the complete plasmid pETJAL into JAL10 competent cells using electroporation (or other methods such as chemical transformation) to obtain the engineered bacterium JAL11.
实施例2Example 2
本实施例旨在说明实施例1中质粒pETJAL的构建方法,具体步骤如下:This example is intended to illustrate the construction method of plasmid pETJAL in Example 1, and the specific steps are as follows:
分别以E.coliW3110 ATCC 27325基因组为模板,以aspC-pet-S、aspC-pet-A为引物,扩增得到aspC基因,以thrAfbr-pet-S、thrC-pet-A为引物,扩增得到thrAfbr、、thrB、thrC基因,以asd-pet-S、asd-pet-A为引物,扩增得到asd基因,以tdh-pet-S、tdh-pet-A为引物,扩增得到tdh基因,以itaE-pet-S、itaE-pet-A为引物,扩增得到itaE基因;以Rhodobactersphaeroides基因组为模板,以alaS-pet-S、alaS-pet-A为引物,扩增得到alaS基因,以上提及的基因通过T7启动子在质粒中过表达。Using the E.coliW3110 ATCC 27325 genome as a template and aspC-pet-S and aspC-pet-A as primers, the aspC gene was amplified; using thrAFbr -pet-S and thrC-pet-A as primers, the thrAFbr , thrB and thrC genes were amplified; using asd-pet-S and asd-pet-A as primers, the asd gene was amplified; using tdh-pet-S and tdh-pet-A as primers, the tdh gene was amplified; using itaE-pet-S and itaE-pet-A as primers, the itaE gene was amplified; using the Rhodobactersphaeroides genome as a template and alaS-pet-S and alaS-pet-A as primers, the alaS gene was amplified. The above-mentioned genes were overexpressed in the plasmid via the T7 promoter.
将基因片段与质粒线性化载体通过重组酶连接,即可得到完整质粒。连接方法可选用任意重组酶,本实施例中选用南京诺唯赞生物科技股份有限公司的ClonExpress®快速克隆技术进行过表达质粒的构建。The gene fragment and the plasmid linearized vector are connected by recombinase to obtain a complete plasmid. Any recombinase can be used for the connection method. In this embodiment, the ClonExpress® rapid cloning technology of Nanjing Novogene Biotech Co., Ltd. is used to construct the overexpression plasmid.
实施例3Example 3
本实施例旨在说明工程菌JAL11的摇瓶发酵应用,具体步骤为:This example is intended to illustrate the application of shake flask fermentation of the engineered bacteria JAL11. The specific steps are as follows:
①斜面培养:取-80℃冰箱保藏菌种接种在斜面培养基上,32-35℃培养14h,斜面培养基选用通用LB固体培养基。① Slant culture: Take the bacteria stored in a -80℃ refrigerator and inoculate it on the slant culture medium, and culture it at 32-35℃ for 14h. The slant culture medium should be the universal LB solid culture medium.
②摇瓶种子培养:取固体斜面菌种接种至摇瓶培养基中进行发酵。培养温度36-37℃,培养时间16h,摇床转速220r/min,pH6.4-6.7,种子培养基为葡萄糖25 g/L,酵母3.5 g/L,蛋白胨1.3 g/L,(NH4)2SO41 g/L,K2HPO4·3H2O 2 g/L,MgSO4·7H2O 2 g/L,柠檬酸1.5 g/L,MnSO4·H2O 5 mg/L,微量元素2 mg/L,其余为水。② Shake flask seed culture: Take the solid slant bacteria and inoculate it into the shake flask medium for fermentation. The culture temperature is 36-37℃, the culture time is 16h, the shaker speed is 220r/min, the pH is 6.4-6.7, and the seed culture medium is 25 g/L glucose, 3.5 g/L yeast, 1.3 g/L peptone, 1 g/L (NH 4 ) 2 SO 4 , 2 g/L K 2 HPO 4 ·3H 2 O, 2 g/L MgSO 4 ·7H 2 O, 1.5 g/L citric acid, 5 mg/L MnSO 4 ·H 2 O, 2 mg/L trace elements, and the rest is water.
③摇瓶发酵培养:发酵接种量为15-20%,培养温度为32-35℃,pH在6.4-6.7,培养时间30h,摇床转速220r/min;采用的发酵培养基为:葡萄糖15 g/L,酵母粉3 g/L,蛋白胨1g/L,(NH4)2SO42 g/L,K2HPO4·3H2O 5 g/L,MgSO4·7H2O 2 g/L,MnSO4·H2O 10 mg/L,FeSO4·7H2O 30 mg/L,微量元素2 mg/L,其余为水。③ Shake flask fermentation culture: the fermentation inoculation amount is 15-20%, the culture temperature is 32-35℃, the pH is 6.4-6.7, the culture time is 30h, and the shaker speed is 220r/min; the fermentation medium used is: glucose 15 g/L, yeast powder 3 g/L, peptone 1g/L, (NH4) 2 SO 4 2 g/L, K 2 HPO 4 ·3H 2 O 5 g/L, MgSO 4 ·7H 2 O 2 g/L, MnSO 4 ·H 2 O 10 mg/L, FeSO 4 ·7H 2 O 30 mg/L, trace elements 2 mg/L, and the rest is water.
以野生型E.coli W3110为对照组,经过36h发酵验证,野生型E.coli W3110未能积累5-氨基乙酰丙酸,实施例1所述工程菌JAL11积累了9.3g/L5-氨基乙酰丙酸,证明了该菌株的有效性。Using wild-type E. coli W3110 as the control group, after 36 hours of fermentation verification, the wild-type E. coli W3110 failed to accumulate 5-aminolevulinic acid, while the engineered bacteria JAL11 described in Example 1 accumulated 9.3 g/L 5-aminolevulinic acid, proving the effectiveness of the strain.
实施例4Example 4
本实施例旨在说明菌JAL11(A组)和JAL10(B组)在相同培养条件下,比较甘氨酸途径和C5途径共同作用与C5途径单独作用对5-氨基乙酰丙酸生产能力的影响。分A、B两组实验,其中:This example aims to illustrate the effect of the combined action of the glycine pathway and the C5 pathway and the C5 pathway alone on the production capacity of 5-aminolevulinic acid in strains JAL11 (group A) and JAL10 (group B) under the same culture conditions. The experiment is divided into two groups, A and B, in which:
A组与B组采用实施例3中完全相同的培养方法,B组与A组不同之处在于,A组大肠杆菌中存在pETJAL质粒。发酵进行共36h,在12h、24h、36h取样,分别检测5-氨基乙酰丙酸产量与生物量参数,结果如下表2所示。Group A and Group B adopted the same culture method as in Example 3. The difference between Group B and Group A was that pETJAL plasmid was present in the E. coli of Group A. The fermentation was carried out for a total of 36 hours, and samples were taken at 12 hours, 24 hours, and 36 hours to detect the 5-aminolevulinic acid yield and biomass parameters, respectively. The results are shown in Table 2 below.
表2 5-氨基乙酰丙酸产量与生物量参数Table 2 5-aminolevulinic acid yield and biomass parameters
结果可见,甘氨酸途径和C5途径共同作用生产5-氨基乙酰丙酸比C5单途径产量高,因此合理应用甘氨酸途径和C5途径共同作用积累了9.3g/L5-氨基乙酰丙酸,这证明了菌株的有效性。The results showed that the production of 5-aminolevulinic acid by the combined action of glycine pathway and C5 pathway was higher than that by the C5 pathway alone. Therefore, the rational application of the combined action of glycine pathway and C5 pathway accumulated 9.3 g/L 5-aminolevulinic acid, which proved the effectiveness of the strain.
以上所述仅是本发明的优选实施方式,应当指出,对于本技术领域的普通技术人员来说,在不脱离本发明原理的前提下,还可以做出若干改进和润饰,本技术领域技术人员以本发明的方法或以本方法为基础进行的菌种改造等改进和润饰均视为本发明的保护范围。The above is only a preferred embodiment of the present invention. It should be pointed out that for ordinary technicians in this technical field, several improvements and modifications can be made without departing from the principles of the present invention. Improvements and modifications such as strain transformation carried out by technicians in this technical field based on the method of the present invention or on the basis of the method are deemed to be within the scope of protection of the present invention.
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