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CN117660499A - Glycococcus fatty acid thioesterase gene and its application in improving linoleic acid synthesis - Google Patents

Glycococcus fatty acid thioesterase gene and its application in improving linoleic acid synthesis Download PDF

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CN117660499A
CN117660499A CN202311703279.5A CN202311703279A CN117660499A CN 117660499 A CN117660499 A CN 117660499A CN 202311703279 A CN202311703279 A CN 202311703279A CN 117660499 A CN117660499 A CN 117660499A
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李玉芹
刘晓
罗媛媛
孟醒
彭宗凡
钟亮
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Abstract

The invention discloses a coccoid fatty acid thioesterase gene and application thereof in improving linoleic acid synthesis, belonging to the technical field of microalgae biology. The coccum fatty acid thioesterase gene is COCSUDRAFT_4465 gene obtained under the condition of inducing the accumulation of coccum grease, the nucleotide sequence of the coccum fatty acid thioesterase gene is shown as SEQ ID NO.1, and the amino acid sequence of the coded protein is shown as SEQ ID NO. 2. The invention discloses a new function of the gene for the first time, namely that the gene is transformed into the chlorella through homologous recombination and over-expressed, so that not only is the high specific growth rate of the transformed chlorella strain endowed, but also the growth period can be shortened, and the synthesis and accumulation amount of linoleic acid in algae cells can be synchronously enhanced, so that the linoleic acid product developed by the new variety of the transformed chlorella strain has high yield, low cost and good safety, and is a positive source of novel linoleic acid dietary raw materials.

Description

胶球藻脂肪酸硫酯酶基因及其在提高亚油酸合成中的应用Glycococcus fatty acid thioesterase gene and its application in improving linoleic acid synthesis

技术领域Technical field

本发明属于微藻生物技术领域,具体涉及胶球藻脂肪酸硫酯酶基因及其在提高亚油酸合成中的应用。The invention belongs to the field of microalgae biotechnology, and specifically relates to the Glycococcus fatty acid thioesterase gene and its application in improving the synthesis of linoleic acid.

背景技术Background technique

亚油酸具有降血压血脂、促进新陈代谢、减肥瘦身等功效。目前亚油酸主要膳食摄取来源为红花籽油和葵花籽油,虽然其亚油酸含量高,但由于植被种植受限等弊端导致产量难以满足人们日益增长的市场需求,寻求新型亚油酸膳食来源迫在眉睫。共球藻纲胶球藻Coccomyxa subbellipsoidea C-169属单细胞绿藻,具有脂质含量高、缺乏刚性细胞壁以简化脂质提取和基因操作、可户外大规模培养以及全基因组序列已知等优势。尤其在一定诱导条件下,胶球藻油脂含量可达细胞干重的20%~50%,且富含亚油酸等多种不饱和脂肪酸,单位面积产量高,被誉为新型食源性产油微藻。Linoleic acid has the effects of lowering blood pressure and blood lipids, promoting metabolism, and losing weight. At present, the main dietary sources of linoleic acid are safflower seed oil and sunflower seed oil. Although they have high linoleic acid content, the output is difficult to meet the growing market demand due to limitations in vegetation planting. New linoleic acid is sought. Meal sources are imminent. Coccomyxa subbellipsoidea C-169 is a single-cell green alga with high lipid content, lack of rigid cell walls to simplify lipid extraction and genetic manipulation, can be cultivated outdoors on a large scale, and the entire genome sequence is known. Especially under certain induction conditions, the oil content of Glycococcus can reach 20% to 50% of the dry cell weight, and it is rich in linoleic acid and other unsaturated fatty acids. It has a high yield per unit area and is known as a new food-derived product. Oil microalgae.

近年来,国内外学者针对胶球藻合成亚油酸特性开展了大量研究。如采用改变氮源种类及浓度、调置光强、温度和pH以及外源添加化学调节剂(如Na2SiO3、NaNO3)等环境因子策略,均能诱导微藻积累亚油酸。尽管通过环境因子调控能有效诱导亚油酸合成积累,整体上优化亚油酸产率,但其与工业化应用脂质产量相比尚存在差距,提高胶球藻亚油酸产率的有效策略也仍然必需。随着基因工程技术的发展,代谢工程成为提高微藻脂质合成和脂肪酸合成积累的有效策略之一。不同于其他胁迫方法促进微藻脂质和脂肪酸积累,基因工程手段提高微藻脂肪酸合成的同时,其生长不会受到限制。脂肪酸硫酯酶能催化水解脂酰CoA和脂酰基-ACP生成CoA、脂酰基载体蛋白ACP以及其他含巯基的化合物,包括含有半胱氨酸残基的蛋白质和肽,同时释放出游离脂肪酸。通过加强硫酯酶活性,促进脂酰CoA代谢,降低其累积量,促进脂质合成积累,从而提高脂肪酸产量,而脂肪酸硫酯酶基因在微藻亚油酸合成过程中的作用还未见报道。In recent years, domestic and foreign scholars have conducted a large number of studies on the properties of linoleic acid synthesized by Glycococcus. For example, strategies such as changing the type and concentration of nitrogen sources, adjusting light intensity, temperature and pH, and adding external chemical regulators (such as Na 2 SiO 3 , NaNO 3 ) and other environmental factors can induce microalgae to accumulate linoleic acid. Although the synthesis and accumulation of linoleic acid can be effectively induced through the regulation of environmental factors and the linoleic acid yield can be optimized as a whole, there is still a gap compared with the lipid yield of industrial applications. There are also effective strategies to improve the linoleic acid yield of Glycococcus Still required. With the development of genetic engineering technology, metabolic engineering has become one of the effective strategies to improve lipid synthesis and fatty acid synthesis and accumulation in microalgae. Unlike other stress methods that promote the accumulation of lipids and fatty acids in microalgae, genetic engineering methods increase the synthesis of fatty acids in microalgae without limiting their growth. Fatty acid thioesterase can catalyze the hydrolysis of fatty acyl-CoA and fatty acyl-ACP to generate CoA, fatty acyl carrier protein ACP, and other sulfhydryl-containing compounds, including proteins and peptides containing cysteine residues, while releasing free fatty acids. By strengthening the activity of thioesterase, it promotes the metabolism of fatty acyl-CoA, reduces its accumulation, promotes lipid synthesis and accumulation, thereby increasing fatty acid production. However, the role of fatty acid thioesterase genes in the synthesis of linoleic acid in microalgae has not been reported. .

发明内容Contents of the invention

为了进一步提升亚油酸产率,本发明提供胶球藻脂肪酸硫酯酶基因及其在提高亚油酸合成中的应用。In order to further improve the yield of linoleic acid, the present invention provides the Glycococcus fatty acid thioesterase gene and its application in improving the synthesis of linoleic acid.

上述胶球藻脂肪酸硫酯酶基因为COCSUDRAFT_4465,其核苷酸序列如SEQ ID NO.1所示,其编码蛋白的氨基酸序列如SEQ ID NO.2所示。The above-mentioned Glycococcus fatty acid thioesterase gene is COCSUDRAFT_4465, its nucleotide sequence is shown in SEQ ID NO.1, and the amino acid sequence of its encoded protein is shown in SEQ ID NO.2.

进一步地,上述胶球藻脂肪酸硫酯酶基因在诱导胶球藻油脂积累条件下获取。Further, the above-mentioned Glycococcus fatty acid thioesterase gene was obtained under conditions that induce Glycococcus lipid accumulation.

进一步地,上述胶球藻为共球藻纲胶球藻Coccomyxa subbellipsoidea C-169。Further, the above-mentioned Gloeococcus is Coccomyxa subbellipsoidea C-169.

上述胶球藻COCSUDRAFT_4465基因在提高亚油酸合成中的应用,通过同源重组转化进入胶球藻中过表达实现藻细胞亚油酸合成积累,包括PCR扩增和过表达重组构建。The above-mentioned Glycococcus COCSUDRAFT_4465 gene is used to improve the synthesis of linoleic acid. It is transformed into Glycococcus through homologous recombination and overexpressed to achieve the synthesis and accumulation of linoleic acid in algae cells, including PCR amplification and overexpression recombinant construction.

进一步地,PCR扩增以胶球藻总RNA反转录成的cDNA为模版,设计的引物包括上游引物序列5’-ATTCCACAACAGCCTTGCGA-3’和下游引物序列5’-CCAGGTGGTGCGAGCC-3’。Further, the PCR amplification was based on the cDNA reverse transcribed from the total RNA of Glycococcus. The designed primers included the upstream primer sequence 5’-ATTCCACAACAGCCTTGCGA-3’ and the downstream primer sequence 5’-CCAGGTGGTGCGAGCC-3’.

进一步地,过表达重组构建,包括设计引物、扩增、获取重组质粒和获取过表达藻株。Further, overexpression recombinant construction includes designing primers, amplification, obtaining recombinant plasmids, and obtaining overexpression algal strains.

进一步地, 设计引物的依据为COCSUDRAFT_4465基因和pCAMBIA1303载体信息,引物序列包括上游引物序列5’-TATGACCATGATTACGAATTCATTCCACAACAGCCTTGCGA-3’和下游引物序列5’-ACGACGGCCAGTGCCAAGCTTCCAGGTGGTGCGAGCC-3’,引物两端分别包括载体的部分序列(划线处,即包括直线和波浪线部分)和酶切位点(划波浪线处)作为同源臂。Further, the primers are designed based on the COCSUDRAFT_4465 gene and pCAMBIA1303 vector information. The primer sequence includes the upstream primer sequence 5'- TATGACCATGATTACGAATTC ATTCCACAACAGCCTTGCGA-3' and the downstream primer sequence 5'- ACGACGGCCAGTGCCAAGCTT CCAGGTGGTGCGAGCC-3'. Both ends of the primer include parts of the vector respectively. The sequence (underlined, including straight and wavy lines) and restriction site (underlined) serve as homology arms.

进一步地,扩增为PCR扩增,扩增产物带有pCAMBIA1303载体的部分序列和酶切位点。Further, the amplification is PCR amplification, and the amplification product contains the partial sequence and restriction site of the pCAMBIA1303 vector.

进一步地,获取重组质粒的方法为同源重组方法,将COCSUDRAFT_4465基因构建进入pCAMBIA1303载体中获取重组质粒。Furthermore, the method for obtaining the recombinant plasmid is the homologous recombination method, and the COCSUDRAFT_4465 gene is constructed into the pCAMBIA1303 vector to obtain the recombinant plasmid.

进一步地,获取过表达藻株的方法为采用电转化法将重组质粒转化进入胶球藻中,并通过抗生素筛选和表达量检测方式筛选得到阳性过表达COCSUDRAFT_4465的重组胶球藻。Furthermore, the method of obtaining the overexpressing algae strain is to use electrotransformation method to transform the recombinant plasmid into Glycococcus, and screen out the recombinant Glycococcus that positively overexpresses COCSUDRAFT_4465 through antibiotic screening and expression level detection.

进一步地,PCR扩增的反应体系为:2.2~2.8 μL cDNA,20~30 μL 2×Hieff Ultra-Rapid Hot Start PCR Master Mix(with Dye),上、下游引物各2.2~2.8 μL,17.2~12.8 μLddH2O;PCR扩增程序为:预变性93~97 ℃ 2~4 min,变性93~97 ℃ 25~35 s,退火55~65 ℃25~35 s,延伸68~74 ℃ 6~10 s,彻底延伸8~12 min,30~40个循环;PCR扩增产物用0.5wt %~3wt %琼脂糖凝胶电泳纯化回收,得到COCSUDRAFT_4465基因的同源重组扩增产物。Further, the reaction system for PCR amplification is: 2.2~2.8 μL cDNA, 20~30 μL 2×Hieff Ultra-Rapid Hot Start PCR Master Mix (with Dye), 2.2~2.8 μL each of upstream and downstream primers, 17.2~12.8 μLddH 2 O; PCR amplification program is: pre-denaturation 93~97 ℃ 2~4 min, denaturation 93~97 ℃ 25~35 s, annealing 55~65 ℃ 25~35 s, extension 68~74 ℃ 6~10 s , thoroughly extended for 8~12 min, 30~40 cycles; the PCR amplification product was purified and recovered by 0.5wt%~3wt% agarose gel electrophoresis, and the homologous recombination amplification product of the COCSUDRAFT_4465 gene was obtained.

进一步地,同源重组方法为:将pCAMBIA1303双酶切产物与COCSUDRAFT_4465基因同源重组产物进行同源重组反应,反应体系为:90~110 ng pCAMBIA1303双酶切产物,90~110 ng COCSUDRAFT_4465基因 PCR同源重组产物,1.5~2.5 μL Exnase II,3~5 μL 5×CEII Buffer,7~13 μL ddH2O,36~38 ℃反应25~35 min;将同源产物转化进入大肠杆菌,鉴定获得含有pCAMBIA1303-COCSUDRAFT_4465重组质粒的阳性菌。Further, the homologous recombination method is: perform a homologous recombination reaction between the pCAMBIA1303 double enzyme digestion product and the COCSUDRAFT_4465 gene homologous recombination product. The reaction system is: 90~110 ng pCAMBIA1303 double enzyme digestion product, 90~110 ng COCSUDRAFT_4465 gene PCR. Source recombinant product, 1.5~2.5 μL Exnase II, 3~5 μL 5×CEII Buffer, 7~13 μL ddH 2 O, react at 36~38°C for 25~35 min; transform the homologous product into E. coli, and identify the product containing Positive bacteria of pCAMBIA1303-COCSUDRAFT_4465 recombinant plasmid.

优先地,获取过表达藻株具体为:将90~110 µL重悬胶球藻细胞与3~5 µgpCAMBIA1303-COCSUDRAFT_4465重组质粒以及35~45 µg鲑精DNA混匀,冰上孵育8~12 min后进行电穿孔,电穿孔后胶球藻细胞立即转至含8~12mL Basal培养液的试管中,在黑暗条件下复苏18~30 h,再转至正常光强下诱导18~30 h,然后3500~4500 g离心8~12 min收集藻细胞,随后用0.5~0.8 mL Basal培养液重悬藻细胞,采用潮霉素B筛选得到初步阳性藻;再经表达量检测方式筛选获取过表达COCSUDRAFT_4465基因的阳性重组胶球藻株。Preferably, the specific steps to obtain overexpressing algae strains are: mix 90~110 µL resuspended Collococcus cells with 3~5 µg pCAMBIA1303-COCSUDRAFT_4465 recombinant plasmid and 35~45 µg salmon sperm DNA, and incubate on ice for 8~12 minutes. Electroporation was performed. After electroporation, the Glycococcus cells were immediately transferred to a test tube containing 8 to 12 mL of Basal culture medium, recovered under dark conditions for 18 to 30 hours, and then transferred to normal light intensity for induction for 18 to 30 hours, and then 3500 Centrifuge at ~4500g for 8~12 minutes to collect the algal cells, then resuspend the algal cells in 0.5~0.8 mL Basal culture medium, and use hygromycin B to screen to obtain preliminary positive algae; then use expression detection to screen to obtain overexpressing COCSUDRAFT_4465 gene Positive recombinant Glycococcus strains.

进一步地,上述应用还包括转化胶球藻株培养、收集、脂肪酸提取和亚油酸含量计算,具体为:挑取过表达COCSUDRAFT_4465基因的阳性重组单克隆胶球藻株,接入Basal培养基培养至对数稳定末期,离心重组藻培养液,并进行藻泥清洗,经干燥(冷冻干燥或喷雾干燥)获得藻粉,称重藻粉获得重组藻生物量;同步将获得重组藻藻粉经有机溶剂抽提获取油脂,将油脂皂化获得脂肪酸甲酯,采用GC内标法测得脂肪酸组成,并计算得到亚油酸含量。Furthermore, the above application also includes the cultivation, collection, fatty acid extraction and linoleic acid content calculation of transformed Glycococcus strains. Specifically, the positive recombinant monoclonal Glycococcus strains overexpressing the COCSUDRAFT_4465 gene are selected and cultured in Basal medium. At the end of logarithmic stability, centrifuge the recombinant algae culture solution, clean the algae mud, obtain algae powder through drying (freeze drying or spray drying), and weigh the algae powder to obtain the recombinant algae biomass; at the same time, the recombinant algae powder will be obtained through organic Solvent extraction was used to obtain the oil, and the oil was saponified to obtain fatty acid methyl ester. The fatty acid composition was measured using the GC internal standard method, and the linoleic acid content was calculated.

与现有技术相比,本发明具有如下有益效果:Compared with the prior art, the present invention has the following beneficial effects:

(1)胶球藻脂肪酸硫酯酶基因COCSUDRAFT_4465经同源重组转化进入胶球藻中过表达,不仅能够显著增强藻细胞内亚油酸合成积累效率,同时还能明显缩短生长周期。(1) The Glycococcus fatty acid thioesterase gene COCSUDRAFT_4465 was transformed into Glycococcus through homologous recombination and overexpressed. It can not only significantly enhance the synthesis and accumulation efficiency of linoleic acid in the algae cells, but also significantly shorten the growth cycle.

(2)COCSUDRAFT_4465基因为胶球藻自有基因,安全性能好,且开发的亚油酸产品产率高、成本低,具有良好的工业化应用价值。(2) The COCSUDRAFT_4465 gene is the own gene of Glycococcus and has good safety performance. The developed linoleic acid product has high yield and low cost, and has good industrial application value.

(3)过表达COCSUDRAFT_4465基因能为工业化利用微藻产亚油酸提供新藻株,从而能够进一步提升工业化应用效率。(3) Overexpression of the COCSUDRAFT_4465 gene can provide new algae strains for industrial utilization of microalgae to produce linoleic acid, which can further improve the efficiency of industrial application.

附图说明Description of drawings

图1为胶球藻COCSUDRAFT_4465基因PCR扩增产物电泳图(注:M为DNA Maker; 1为胶球藻COCSUDRAFT_4465基因PCR扩增产物)。Figure 1 is the electrophoresis diagram of the PCR amplification product of the Glycococcus COCSUDRAFT_4465 gene (Note: M is DNA Maker; 1 is the PCR amplification product of the Glycococcus COCSUDRAFT_4465 gene).

图2为胶球藻COCSUDRAFT_4465基因PCR同源重组扩增产物电泳图(注:PCR产物片段大小为载体同源部分+EcoR I和Hind III酶切位点+COCSUDRAFT_4465基因;M为DNAMaker;1为COCSUDRAFT_4465基因PCR同源重组扩增产物)。Figure 2 is the electrophoresis diagram of the PCR homologous recombination amplification product of the Glycococcus COCSUDRAFT_4465 gene (Note: The size of the PCR product fragment is the homologous part of the vector + EcoR I and Hind III enzyme cutting sites + COCSUDRAFT_4465 gene; M is DNAMaker; 1 is COCSUDRAFT_4465 Gene PCR homologous recombination amplification product).

图3为pCAMBIA1303-COCSUDRAFT_4465阳性菌质粒菌落PCR产物电泳图(注:M为DNAMaker;1、2为pCAMBIA1303-COCSUDRAFT_4465阳性菌质粒菌落PCR产物)Figure 3 is the electrophoresis diagram of pCAMBIA1303-COCSUDRAFT_4465 positive bacterial plasmid colony PCR product (Note: M is DNAMaker; 1 and 2 are pCAMBIA1303-COCSUDRAFT_4465 positive bacterial plasmid colony PCR product)

图4为双酶切pCAMBIA1303-COCSUDRAFT_4465重组质粒验证电泳图(注:M为DNAMaker;1为pCAMBIA1303-COCSUDRAFT_4465重组质粒双酶切产物)。Figure 4 is a verification electrophoresis diagram of double enzyme digestion of pCAMBIA1303-COCSUDRAFT_4465 recombinant plasmid (Note: M is DNAMaker; 1 is the double enzyme digestion product of pCAMBIA1303-COCSUDRAFT_4465 recombinant plasmid).

图5为COCSUDRAFT_4465基因转化胶球藻潮霉素B抗性筛选菌落图Figure 5 is a diagram of colonies selected for hygromycin B resistance transformed by COCSUDRAFT_4465 gene.

图6为COCSUDRAFT_4465基因重组胶球藻中基因表达分析(注:野生株为未转化COCSUDRAFT_4465基因的胶球藻株;转化株为COCSUDRAFT_4465基因过表达重组胶球藻株;柱星号表示统计分析上有显著差异(t检验,*p<0.05))。Figure 6 shows the gene expression analysis in the COCSUDRAFT_4465 gene recombinant Glycococcus (note: the wild strain is the Glycococcus strain that has not been transformed with the COCSUDRAFT_4465 gene; the transformed strain is the COCSUDRAFT_4465 gene overexpression recombinant Glycococcus strain; the asterisks in the columns indicate statistical analysis) Significant difference (t-test, * p <0.05)).

图7为COCSUDRAFT_4465基因过表达重组胶球藻和野生型胶球藻生长周期和生长速率对比图(注:野生株为未转化COCSUDRAFT_4465基因的胶球藻株;转化株为COCSUDRAFT_4465基因过表达重组胶球藻株;柱星号表示统计分析上有显著差异,t检验, **p<0.01)。Figure 7 is a comparison chart of the growth cycle and growth rate of COCSUDRAFT_4465 gene-overexpressing recombinant Glycococcus and wild-type Glycococcus (note: the wild strain is a Glycococcus strain that has not been transformed with the COCSUDRAFT_4465 gene; the transformed strain is the COCSUDRAFT_4465 gene-overexpressing recombinant Glycococcus Algal strains; column asterisks indicate significant differences in statistical analysis, t test, ** p <0.01).

图8为COCSUDRAFT_4465基因过表达重组胶球藻和野生型胶球藻油脂含量对比图(注:野生株为未转化COCSUDRAFT_4465基因的胶球藻株;转化株为COCSUDRAFT_4465基因Figure 8 is a comparison of the oil content of COCSUDRAFT_4465 gene overexpressed recombinant Glycococcus and wild-type Glycococcus (note: the wild strain is the Glycococcus strain that has not been transformed with the COCSUDRAFT_4465 gene; the transformed strain is the COCSUDRAFT_4465 gene

过表达重组胶球藻株;柱星号表示统计分析上有显著差异,t检验,*p<0.05,**p<0.01)。Overexpression of recombinant Glycococcus strain; column asterisk indicates significant difference in statistical analysis, t test, * p < 0.05, ** p < 0.01).

图9为COCSUDRAFT_4465基因过表达重组胶球藻脂肪酸的气相色谱图。Figure 9 is a gas chromatogram of fatty acids from recombinant Glycococcus overexpressing the COCSUDRAFT_4465 gene.

图10为野生型胶球藻脂肪酸的气相色谱图。Figure 10 is a gas chromatogram of fatty acids of wild-type Glycococcus.

图11为COCSUDRAFT_4465基因过表达重组胶球藻和野生型胶球藻亚油酸含量和产率对比图(注:野生株为未转化COCSUDRAFT_4465基因的胶球藻株;转化株为COCSUDRAFT_4465基因过表达重组胶球藻株;柱子上的星号表示统计分析上有显著差异,t检验,*p<0.05,**p<0.01)。Figure 11 is a comparison of the linoleic acid content and yield of the COCSUDRAFT_4465 gene overexpression recombinant Glycococcus and wild-type Glycococcus (note: the wild strain is the COCSUDRAFT_4465 gene overexpression recombinant strain) (Note: the wild strain is the COCSUDRAFT_4465 gene overexpression recombinant strain) Glycococcus strains; asterisks on columns indicate significant differences in statistical analysis, t test, * p < 0.05, ** p < 0.01).

具体实施方式Detailed ways

下面结合具体实施例对本发明做进一步详细的说明,但本发明并不限于此。The present invention will be further described in detail below with reference to specific embodiments, but the present invention is not limited thereto.

实施例1 胶球藻COCSUDRAFT_4465基因的获取Example 1 Acquisition of Glycococcus COCSUDRAFT_4465 gene

1. 胶球藻COCSUDRAFT_4465基因的获得1. Obtaining the COCSUDRAFT_4465 gene of Glycococcus

利用转录组学手段筛选得到一个胶球藻脂肪酸硫酯酶基因,该基因在NCBI的Genebank中的ID号为COCSUDRAFT_4465,基因全长编码框核苷酸序列长度为843 bp,由281个氨基酸组成,编码核苷酸序列如SEQ ID NO.1所示,氨基酸序列如SEQ ID NO.2所示。A Glycococcus fatty acid thioesterase gene was screened using transcriptomics. The gene's ID number in NCBI's Genebank is COCSUDRAFT_4465. The full-length coding frame nucleotide sequence of the gene is 843 bp and consists of 281 amino acids. The encoding nucleotide sequence is shown in SEQ ID NO.1, and the amino acid sequence is shown in SEQ ID NO.2.

2. 胶球藻COCSUDRAFT_4465基因的克隆2. Cloning of Glycococcus COCSUDRAFT_4465 gene

离心收集培养至对数期的胶球藻细胞(藻细胞浓度为1×106 cells/mL),采用Trizol法提取胶球藻细胞总RNA,并通过逆转录酶逆转录,获得cDNA模板。Glycococcus cells cultured to the logarithmic phase were collected by centrifugation (the algae cell concentration was 1×10 6 cells/mL). The total RNA of the Glycococcus cells was extracted using the Trizol method and reverse transcribed by reverse transcriptase to obtain the cDNA template.

根据NCBI的Gene bank中COCSUDRAFT_4465基因CDs序列,按照标准程序设计引物:上游引物序列:5’-ATTCCACAACAGCCTTGCGA-3’;下游引物序列:5’-CCAGGTGGTGCGAGAccording to the COCSUDRAFT_4465 gene CDs sequence in NCBI’s Gene bank, primers were designed according to standard procedures: upstream primer sequence: 5’-ATTCCACAACAGCCTTGCGA-3’; downstream primer sequence: 5’-CCAGGTGGTGCGAG

CC-3’;通过PCR扩增得到COCSUDRAFT_4465基因扩增产物,PCR扩增的反应体系为:2.5 μL cDNA,25 μL 2×Hieff Ultra-Rapid HotStart PCR Master Mix(with Dye),上、下游引物各2.5 μL,17.5 μL ddH2O(PCR扩增试剂盒购自翌圣生物科技(上海)股份有限公司)。PCR 扩增程序为:预变性95 ℃ 3 min,变性95 ℃ 30 s,退火60 ℃ 30 s,延伸 72 ℃8 s,彻底延伸10 min,35个循环。CC-3'; The COCSUDRAFT_4465 gene amplification product was obtained through PCR amplification. The reaction system for PCR amplification was: 2.5 μL cDNA, 25 μL 2×Hieff Ultra-Rapid HotStart PCR Master Mix (with Dye), upstream and downstream primers respectively 2.5 μL, 17.5 μL ddH 2 O (PCR amplification kit was purchased from Yisheng Biotechnology (Shanghai) Co., Ltd.). The PCR amplification program was: pre-denaturation at 95°C for 3 min, denaturation at 95°C for 30 s, annealing at 60°C for 30 s, extension at 72°C for 8 s, and complete extension for 10 min, 35 cycles.

将COCSUDRAFT_4465基因的PCR扩增产物用1wt%琼脂糖凝胶电泳验证其核苷酸片段大小,由图1可知,在840 bp片段大小位置出现条带。进一步割胶回收扩增产物,送至测序公司,经测序,其序列与NCBI的Gene bank中记载的序列(SEQ ID NO.1)相似性达到100%。说明基因产物PCR扩增成功,可用于下一步实验。The PCR amplification product of the COCSUDRAFT_4465 gene was verified by 1wt% agarose gel electrophoresis to verify its nucleotide fragment size. As shown in Figure 1, a band appeared at the 840 bp fragment size position. The amplified product was further cut and recovered and sent to a sequencing company. After sequencing, the sequence was 100% similar to the sequence (SEQ ID NO. 1) recorded in NCBI's Gene bank. This indicates that the PCR amplification of the gene product is successful and can be used in the next experiment.

实施例2 COCSUDRAFT_4465基因过表达重组胶球藻的获取Example 2 Obtaining COCSUDRAFT_4465 gene overexpression recombinant Glycococcus

1. pCAMBIA1303-COCSUDRAFT_4465表达载体构建1. Construction of pCAMBIA1303-COCSUDRAFT_4465 expression vector

根据COCSUDRAFT_4465的基因序列和pCAMBIA1303载体信息设计引物:上游引物序列:5’-TATGACCATGATTACGAATTCATTCCACAACAGCCTTGCGA-3’,下游引物序列:5’-ACGACGGCC AGTGCCAAGCTTCCAGGTGGTGCGAGCC-3’,引物两端分别包括载体的部分序列(划线处)和酶切位点(划波浪线处)作为同源臂。Design primers based on the gene sequence of COCSUDRAFT_4465 and pCAMBIA1303 vector information: upstream primer sequence: 5'- TATGACCATGATTACGAATTC ATTCCACAACAGCCTTGCGA-3', downstream primer sequence: 5'- ACGACGGCC AGTGCCAAGCTT CCAGGTGGTGCGAGCC-3', and both ends of the primer include the partial sequence of the vector (underlined) Lines) and restriction enzyme cleavage sites (wavy lines) serve as homology arms.

通过PCR扩增得到COCSUDRAFT_4465基因同源重组产物,PCR扩增反应体系为:2.5μL COCSUDRAFT_4465基因扩增产物(实施例1中),25 μL 2×Hieff Ultra-Rapid HotStartPCR Master Mix(with Dye)(PCR扩增试剂盒购自翌圣生物科技(上海)股份有限公司),上、下游引物各2.5 μL,17.5 μL ddH2O;PCR扩增程序为:预变性95 ℃ 3 min,变性95 ℃ 30s,退火60 ℃ 30 s,延伸 72 ℃ 8 s,彻底延伸10 min,35个循环。PCR扩增产物用1wt%琼脂糖凝胶电泳验证其核苷酸片段大小。由图2可知,在885 bp片段大小位置出现条带,说明胶球藻COCSUDRAFT_4465基因同源重组产物(带pCAMBIA1303载体部分序列和酶切位点)PCR扩增成功。按照操作说明,将PCR扩增产物采用回收试剂盒(购自生工生物工程上海股份有限公司)纯化回收用于下一步实验。The COCSUDRAFT_4465 gene homologous recombination product was obtained through PCR amplification. The PCR amplification reaction system was: 2.5 μL COCSUDRAFT_4465 gene amplification product (in Example 1), 25 μL 2×Hieff Ultra-Rapid HotStartPCR Master Mix (with Dye) (PCR The amplification kit was purchased from Yisheng Biotechnology (Shanghai) Co., Ltd.), with 2.5 μL of upstream and downstream primers and 17.5 μL of ddH 2 O; the PCR amplification program was: pre-denaturation at 95 °C for 3 min, denaturation at 95 °C for 30 s, Annealing at 60°C for 30 s, extension at 72°C for 8 s, complete extension for 10 min, 35 cycles. The size of the nucleotide fragment of the PCR amplification product was verified by 1wt% agarose gel electrophoresis. As can be seen from Figure 2, a band appears at the 885 bp fragment size position, indicating that the homologous recombination product of Glycococcus COCSUDRAFT_4465 gene (with pCAMBIA1303 vector partial sequence and enzyme cutting site) was successfully amplified by PCR. According to the operating instructions, the PCR amplification product was purified and recovered using a recovery kit (purchased from Sangon Bioengineering Shanghai Co., Ltd.) for the next experiment.

将pCAMBIA1303载体采用EcoR I和Hind III进行双酶切,酶切体系为:25 μLpCAMBIA1303,1 μL Quick Cut EcoR I,1 μL Quick Cut Hind III,10 μL 10×QuickCutBuffer(南京诺维赞生物有限公司),13 μL ddH2O,37 ℃酶切30 min。按照操作说明,酶切产物采用柱式DNA胶回收试剂盒(购自生工生物工程上海股份有限公司)进行清洗回收。后将pCAMBIA1303双酶切产物与COCSUDRAFT_4465同源重组产物进行同源重组反应,反应体系为:2 μL pCAMBIA1303双酶切产物,2 μL COCSUDRAFT_4465 PCR同源重组产物,2 μLExnase II,4 μL 5×CE II Buffer,10 μL ddH2O,37 ℃反应30 min。将同源产物进行大肠杆菌转化,通过卡那霉素鉴定获得含有pCAMBIA1303-COCSUDRAFT_4465阳性菌质粒。后将pCAMBIA1303-COCSUDRAFT_4465阳性菌质粒采用菌落PCR验证,PCR产物用1wt%琼脂糖凝胶电泳验证其核苷酸片段大小。由图3 pCAMBIA1303-COCSUDRAFT_4465质粒阳性菌菌落PCR产物电泳图可知,在885 bp片段大小位置出现条带。为进一步验证重组质粒是否构建成功,将重组质粒从菌液中用试剂盒提取和双酶切之后跑胶,如图4所示,在13200 bp和840 bp出现两条条带,进一步将菌液送至生工生物工程上海股份有限公司进行测序,测得其核苷酸序列如SEQ ID NO.3所示(其中序列首端的“tatgaccatg attacgaattc”、尾端的“aagcttggcactggccg tcgt”为同源臂序列,其余为COCSUDRAFT_4465基因序列,与NCBI的Gene bank中记载的序列(SEQ ID NO.1)相似性达到100%),说明pCAMBIA1303-COCSUDRAFT_4465重组质粒构建成功,可用于下一步实验。The pCAMBIA1303 vector was double digested with EcoR I and Hind III. The enzyme digestion system was: 25 μL pCAMBIA1303, 1 μL Quick Cut EcoR I, 1 μL Quick Cut Hind III, 10 μL 10×QuickCutBuffer (Nanjing Novizan Biotechnology Co., Ltd.) , 13 μL ddH 2 O, digested at 37°C for 30 min. According to the operating instructions, the digested products were cleaned and recovered using a column DNA gel recovery kit (purchased from Sangon Bioengineering Shanghai Co., Ltd.). Then, perform a homologous recombination reaction between the pCAMBIA1303 double enzyme digestion product and the COCSUDRAFT_4465 homologous recombination product. The reaction system is: 2 μL pCAMBIA1303 double enzyme digestion product, 2 μL COCSUDRAFT_4465 PCR homologous recombination product, 2 μL Exnase II, 4 μL 5×CE II Buffer, 10 μL ddH 2 O, react at 37°C for 30 minutes. The homologous product was transformed into Escherichia coli, and the positive bacterial plasmid containing pCAMBIA1303-COCSUDRAFT_4465 was obtained through kanamycin identification. Then, the pCAMBIA1303-COCSUDRAFT_4465 positive bacterial plasmid was verified by colony PCR, and the PCR product was verified by 1wt% agarose gel electrophoresis to verify its nucleotide fragment size. As shown in Figure 3, the electrophoresis chart of the PCR product of the pCAMBIA1303-COCSUDRAFT_4465 plasmid-positive bacterial colony shows that a band appears at the 885 bp fragment size position. In order to further verify whether the recombinant plasmid was successfully constructed, the recombinant plasmid was extracted from the bacterial liquid with a kit and double enzyme digested and then run on gel. As shown in Figure 4, two bands appeared at 13200 bp and 840 bp. The bacterial liquid was further It was sent to Sangon Bioengineering Shanghai Co., Ltd. for sequencing, and the nucleotide sequence was determined as shown in SEQ ID NO.3 (the "tatgaccatg attacgaattc" at the beginning of the sequence and the "aagctt ggcact ggccg tcgt " at the end of the sequence are homology arms sequence, and the rest is the COCSUDRAFT_4465 gene sequence, which is 100% similar to the sequence (SEQ ID NO. 1) recorded in NCBI's Gene bank), indicating that the pCAMBIA1303-COCSUDRAFT_4465 recombinant plasmid was successfully constructed and can be used for the next experiment.

2. 重组质粒转化胶球藻细胞2. Transformation of Gliococcus cells with recombinant plasmid

将上述重组质粒通过电击方法转化到胶球藻细胞中,然后将电击后的藻细胞倒入Basal培养基中进行复苏,后涂布到含有博来霉素的固体培养基上,放入光照培养箱中进行培养。具体步骤包括如下:The above recombinant plasmid is transformed into Glycococcus cells through electroporation, and then the electroporated algae cells are poured into Basal medium for recovery, and then spread on a solid medium containing bleomycin, and placed in light culture Cultured in a box. Specific steps include the following:

将培养至对数期的胶球藻细胞(4×106~5×106 cell/mL),在4 ℃和8000 g条件下离心10 min,用无菌冷冻超纯水重悬藻泥细胞3次,最后重悬至100 μL超纯水中,使藻细胞最终浓度为2×109 cell/mL。随后,提取pCAMBIA1303-COCSUDRAFT_4465重组质粒,取100 μL重悬藻细胞与4 μg pCAMBIA1303-COCSUDRAFT_4465重组质粒以及40 μg(10 μg/μL)鲑精DNA(95 ℃以上水浴煮沸1 min变性)混合,在冰上孵育至少10 min,然后转移放入2 mm电击杯中,使用Bio-rad电转化仪进行电转,参数设置为:指数衰减,场强2000 V,电容25 μF、并联电阻200 Ω。电转化后藻细胞立即转移到含10 mL Basal培养基的试管中,黑暗环境下复苏24 h,再转移到正常光强条件下培养24 h。后4000 g离心10 min收集藻细胞,用0.5 mLBasal培养液重悬藻细胞,并平板涂布于含15 μg/mL潮霉素B的固体Basal培养基上培养数日。Centrifuge the Gliococcus cells (4×10 6 ~5×10 6 cell/mL) that have been cultured to the logarithmic phase at 4°C and 8000g for 10 minutes, and resuspend the algae slurry cells in sterile frozen ultrapure water. 3 times, and finally resuspended in 100 μL ultrapure water to make the final concentration of algal cells 2×10 9 cells/mL. Subsequently, extract the pCAMBIA1303-COCSUDRAFT_4465 recombinant plasmid, take 100 μL of resuspended algal cells, mix with 4 μg of pCAMBIA1303-COCSUDRAFT_4465 recombinant plasmid and 40 μg (10 μg/μL) of salmon sperm DNA (denatured by boiling in a water bath above 95°C for 1 min), and incubate on ice Incubate for at least 10 minutes, then transfer to a 2 mm electroshock cup, and use a Bio-rad electroconverter for electroporation. The parameter settings are: exponential decay, field strength 2000 V, capacitance 25 μF, and parallel resistance 200 Ω. After electrotransformation, the algae cells were immediately transferred to a test tube containing 10 mL Basal medium, recovered in a dark environment for 24 h, and then transferred to normal light intensity for culture for 24 h. The algal cells were collected by centrifugation at 4000 g for 10 min, resuspended in 0.5 mL Basal culture medium, and plated on solid Basal medium containing 15 μg/mL hygromycin B and cultured for several days.

3. 阳性转化胶球藻株筛选3. Screening of positive transformed Gliococcus strains

由图5可知,待COCSUDRAFT_4465基因电转化胶球藻株培养数日后,单藻落清晰可见,生长情况良好,可进行下一步阳性藻株筛选鉴定。具体步骤为:挑取上述单藻落,接入液体Basal培养基中进行复苏培养4~5天,待单藻落扩大生长后,吸取1 mL藻液加入10 mL新鲜的含15 μg/mL潮霉素B的Basal培养基中继续培养4~5天,待藻液生长扩大后反复筛选3次,以野生型藻株作为对照。待胶球藻阳性克隆在抗性中可以稳定表达,取1 mL加入200 mL新鲜Basal培养基中扩大培养,用于后续验证实验。取50 mL对数期藻液,提取基因组DNA,使用潮霉素B基因特异性引物进行PCR,1wt%琼脂糖凝胶电泳验证。As can be seen from Figure 5, after several days of cultivation of the COCSUDRAFT_4465 gene electroconverted Glycococcus strain, single algae colonies are clearly visible and the growth is good, and the next step of screening and identification of positive algae strains can be carried out. The specific steps are: pick the above-mentioned single algal colony, insert it into the liquid Basal medium and conduct recovery and culture for 4 to 5 days. After the single algal colony expands and grows, absorb 1 mL of algal liquid and add 10 mL of fresh algal solution containing 15 μg/mL tide. Continue culturing in Basal medium containing mycomycin B for 4 to 5 days. After the algae liquid grows and expands, it is screened three times repeatedly, and the wild-type algae strain is used as a control. When the positive clone of Glycococcus can be stably expressed in the resistant medium, 1 mL is added to 200 mL of fresh Basal medium to expand the culture for subsequent verification experiments. Take 50 mL of logarithmic phase algae liquid, extract genomic DNA, use hygromycin B gene-specific primers for PCR, and verify by 1wt% agarose gel electrophoresis.

实施例3 COCSUDRAFT_4465基因转化藻株中过表达验证Example 3 Verification of overexpression of COCSUDRAFT_4465 gene in transformed algal strains

另取50 mL对数期藻液,在4 ℃下以4000 g离心5 min,弃上清液,将获得的藻泥细胞在液氮中快速冷冻,并研磨成粉末,使用RNeasy Plant Mini Kit(QIAGEN Inc.,Valencia, CA, USA)、Total RNA Kit I、miRNA Isolation Kit等试剂盒提取总RNA,使用PrimeScript® RT Reagent Kit(Perfect Real Time)(TakaraBio, Otsu, Japan)试剂盒逆转录RNA成cDNA,并将cDNA样品用TE缓冲液稀释至50 ng/μL,并储存于-20 ℃。使用2xSYBR Green I PCR Master Mix(Applied Biosystems, CA, USA)在LightCycler 96Real-Time PCR系统(Roche,Basel, Switzerland)上进行qRT-PCR。上游引物F: 5’-ATTCCACAACAGCCTTGCGAAGC-3’和下游引物R:5’-AACAGCATGATTCCCAGCCACTTCC-3’。热循环条件如下: 预变性95 ℃ 3 min,变性95 ℃ 30 s,退火60 ℃ 30 s,延伸 72 ℃ 8 s,彻底延伸10 min,35个循环。Take another 50 mL of logarithmic phase algae liquid, centrifuge it at 4000 g for 5 min at 4°C, discard the supernatant, quickly freeze the obtained algae mud cells in liquid nitrogen, grind them into powder, and use the RNeasy Plant Mini Kit ( Total RNA was extracted using kits such as QIAGEN Inc., Valencia, CA, USA), Total RNA Kit I, and miRNA Isolation Kit, and the RNA was reverse transcribed using PrimeScript® RT Reagent Kit (Perfect Real Time) (TakaraBio, Otsu, Japan). cDNA, and dilute the cDNA sample to 50 ng/μL with TE buffer and store at -20 °C. qRT-PCR was performed on a LightCycler 96 Real-Time PCR system (Roche, Basel, Switzerland) using 2xSYBR Green I PCR Master Mix (Applied Biosystems, CA, USA). Upstream primer F: 5’-ATTCCACAACAGCCTTGCGAAGC-3’ and downstream primer R: 5’-AACAGCATGATTCCCAGCCACTTCC-3’. Thermal cycling conditions were as follows: pre-denaturation at 95°C for 3 min, denaturation at 95°C for 30 s, annealing at 60°C for 30 s, extension at 72°C for 8 s, and complete extension for 10 min, 35 cycles.

野生株和转化株样品qRT-PCR均进行三个重复,以54775 60S基因作为内参基因,基因表达水平采用2-ΔΔCt方法计算。由图6可知,转入pCAMBIA1303-COCSUDRAFT_4465载体的转基因胶球藻株基因表达显著高于野生型胶球藻株,说明COCSUDRAFT_4465基因过表达成功,其为COCSUDRAFT_4465过表达阳性胶球藻株。Three replicates of qRT-PCR were performed on both wild strain and transformed strain samples, with the 54775 60S gene as the internal reference gene, and the gene expression level was calculated using the 2 -ΔΔCt method. As can be seen from Figure 6, the gene expression of the transgenic Gliococcus strain transferred into the pCAMBIA1303-COCSUDRAFT_4465 vector is significantly higher than that of the wild-type Glycococcus strain, indicating that the COCSUDRAFT_4465 gene is overexpressed successfully, and it is a COCSUDRAFT_4465 overexpression-positive Glycococcus strain.

实施例4 COCSUDRAFT_4465基因转化胶球藻株产亚油酸能力检测Example 4 Detection of linoleic acid production ability of Glycococcus strain transformed with COCSUDRAFT_4465 gene

为进行直观对比,转化胶球藻株均以野生型胶球藻培养、生长周期、生长速率、油脂产率以及亚油酸产量作为对比指标。For visual comparison, the culture, growth cycle, growth rate, oil yield and linoleic acid production of wild-type Glycococcus strains were used as comparison indicators.

1. COCSUDRAFT_4465基因转化胶球藻株培养1. Culture of COCSUDRAFT_4465 gene-transformed Glycococcus strain

分别挑取COCSUDRAFT_4465基因过表达胶球藻和野生型胶球藻株单藻落接入液体Basal培养基中,将接种液体培养瓶放入转速160 rpm的恒温培养箱内,设置培养温度为28± 1 ℃,光照强度50 µmol/m2/s,光照周期12 h光照:12 h黑暗培养144 h即得接种种子液。取上述种子液以10%接种量接入含100 mL Basal培养基的培养瓶中,在温度28 ± 1℃、光照强度50 µmol/m2/s、光照周期12 h光照:12 h黑暗、转速160 rpm恒温培养箱内培养数日。Select single colonies of the COCSUDRAFT_4465 gene overexpressing Glycococcus and wild-type Glycococcus strains and insert them into the liquid Basal medium. Place the inoculated liquid culture bottle into a constant temperature incubator with a rotation speed of 160 rpm. Set the culture temperature to 28± 1 ℃, light intensity 50 µmol/m 2 /s, photoperiod 12 h light: 12 h dark and incubate for 144 h to obtain the inoculated seed solution. Take the above seed liquid and insert it into a culture bottle containing 100 mL Basal medium at an inoculum volume of 10%. The temperature is 28 ± 1°C, the light intensity is 50 µmol/m 2 /s, and the photoperiod is 12 h light: 12 h dark and rotating speed. Cultivate in a constant temperature incubator at 160 rpm for several days.

2. COCSUDRAFT_4465基因转化胶球藻株生长周期和生长速率的测定2. Determination of the growth cycle and growth rate of COCSUDRAFT_4465 gene-transformed Glycococcus strains

首先通过紫外分光光度计测定野生株胶球藻和转化胶球藻株种子液起始接种OD值,使其种子液接种密度大致保持一致。将野生株和转化株按照测定的初始接种量分别接入Basal液体培养基中,野生株和转化株各自设置3个平行,最后转入培养箱中培养,培养温度为28 ± 1 ℃,光照强度2800±200 lux,光暗比12 h:12 h,转速为120 rpm/min。培养过程中间隔24 h收取野生株和转化株培养液各3瓶,在8000 rpm/min条件下离心10 min,弃去培养基后再用灭菌后的蒸馏水清洗2~3次藻泥,将收集好的藻泥液氮速冻后放进真空冷冻干燥机中冻干收取藻粉,精密电子天平称重获得藻粉质量,以不同时间段藻粉重量变化,确定微藻生长周期。First, the initial inoculation OD value of the seed solution of the wild strain Glycococcus and the transformed Glycococcus strain was measured using a UV spectrophotometer to ensure that the inoculation density of the seed solution was roughly consistent. The wild strain and the transformed strain were respectively inserted into the Basal liquid medium according to the measured initial inoculation amount. The wild strain and the transformed strain were each set up in 3 parallels, and finally transferred to the incubator for culture. The culture temperature was 28 ± 1 ℃, and the light intensity was 2800±200 lux, light-dark ratio 12 h:12 h, rotation speed 120 rpm/min. During the cultivation process, collect 3 bottles each of wild strain and transformed strain culture medium at 24-h intervals, centrifuge at 8000 rpm/min for 10 min, discard the culture medium, and then wash the algae mud 2 to 3 times with sterilized distilled water. The collected algae mud is quickly frozen in liquid nitrogen and then put into a vacuum freeze dryer to freeze-dry to collect algae powder. The quality of the algae powder is obtained by weighing it with a precision electronic balance. The growth cycle of microalgae is determined based on the weight changes of the algae powder in different time periods.

收集培养至稳定末期的藻液,8000 g离心10 min,弃上清液,以蒸馏水洗涤藻泥2-3次后放入-80 ℃超低温冰箱内冷冻10 h,再放入冷冻干燥机冻干48 h获得藻粉。称量冻干藻粉重量,由式(1)计算生长速率。Collect the algae liquid that has been cultured to the end of the stable stage, centrifuge it at 8000g for 10 minutes, discard the supernatant, wash the algae slurry 2-3 times with distilled water, freeze it in a -80°C ultra-low temperature refrigerator for 10 hours, and then freeze it in a freeze dryer. Algae powder was obtained in 48 h. Weigh the freeze-dried algae powder and calculate the growth rate according to formula (1).

V x (g/h)=(X1-X0)/(T1-T0) (1) V x (g/h)=(X 1 -X 0 )/(T 1 -T 0 ) (1)

式中,V x —生长速率(g/h);x 1x 0分别为培养时间t 1t 0测定的藻粉重量(g)。 In the formula , V

3. COCSUDRAFT_4465基因转化胶球藻株胞内油脂含量的测定3. Determination of intracellular lipid content of COCSUDRAFT_4465 gene-transformed Gliococcus strains

准确称取0.02 g (W 1) 上述冻干藻粉,加入0.5 mL水/氯仿/甲醇(v/v/v=0.5:2:1)充分混匀震荡20 min,10000 rpm离心10 min,收集氯仿层,萃取重复3-5次,收集氯仿层至已称重 (W 2) 10 mL离心管中,合并所有清洗液与氯仿层,真空干燥至恒重(W 3),以式(2)和(3)计算总脂含量和产率。Accurately weigh 0.02 g ( W 1 ) of the above freeze-dried algae powder, add 0.5 mL water/chloroform/methanol (v/v/v=0.5:2:1), mix thoroughly and shake for 20 min, centrifuge at 10000 rpm for 10 min, and collect For the chloroform layer, repeat the extraction 3-5 times. Collect the chloroform layer into a 10 mL centrifuge tube that has been weighed ( W 2 ). Combine all the cleaning solutions and the chloroform layer, vacuum dry to constant weight ( W 3 ), and use formula (2) and (3) calculate the total lipid content and yield.

C Lipid (%)=(W 3 -W 2 )/W 1 (2) C Lipid (%) =(W 3 -W 2 )/W 1 (2)

P Lipid (g/L/d)=P Biomass×C Lipid(%) (3) P Lipid (g/L/d)= P Biomass × C Lipid (%) (3)

式中,P Lipid—总脂产率(g/L/d);W 1 —藻粉重量(g);W 2—离心管重量(g);W 3 —离心管和油脂总重量;C lipid—总脂含量(%)。In the formula, P Lipid - total lipid yield (g/L/d); W 1 - weight of algae powder (g); W 2 - weight of centrifuge tube (g); W 3 - total weight of centrifuge tube and oil; C lipid —Total lipid content (%).

4. COCSUDRAFT_4465基因转化胶球藻株胞内亚油酸含量的测定4. Determination of intracellular linoleic acid content of COCSUDRAFT_4465 gene-transformed Glycococcus strains

称取适量藻粉置于烧瓶中,加入95%乙醇2 mL和4 mL水混匀,再加8.3 mol/L盐酸溶液10 mL混匀。将烧瓶放入80℃水浴中水解40 min,间隔10 min振荡一下烧瓶,使黏附在烧瓶壁上的颗粒物混入溶液中。水解完成后,取出样品冷却至室温。加入95%乙醇10 mL混匀。用100 mL乙醚-石油醚混合液分3次提取脂肪,合并提取液至100 mL平底烧瓶中,将石油醚-乙醚层蒸干后获取脂肪。在脂肪提取物中,继续加入2wt%氢氧化钠-甲醇溶液4 mL,14wt%三氟化硼-甲醇溶液4 mL,于45 ℃水浴锅中水浴20 min,冷却至室温后,加入3 mL正己烷,震荡萃取2 min,静置分层。取上清液用0.45 μm滤膜过膜后进行气相色谱分析。气相色谱条件如下:色谱柱TG-FAME(50 m×0.25 mm×0.20 μm);升温程序(80 ℃保持1 min,以20 ℃/min的速率升温至160 ℃,保持1.5 min,再以5 ℃/min的速率升温至230 ℃,保持6min);进样口温度260 ℃;载气流速0.63 mL/min;分流比100:1;质谱条件:离子源温度280℃;传输线温度240 ℃;溶剂延迟时间4 min;离子源:EI源70 eV。按照国家标准GB5009.168-2016给出的计算方法,依据保留时间以及对应峰面积并以式(4)计算亚油酸含量:Weigh an appropriate amount of algae powder into a flask, add 2 mL of 95% ethanol and 4 mL of water and mix well, then add 10 mL of 8.3 mol/L hydrochloric acid solution and mix well. Place the flask into a 80°C water bath for hydrolysis for 40 minutes, and shake the flask at intervals of 10 minutes to mix the particles adhering to the wall of the flask into the solution. After hydrolysis is completed, take out the sample and cool it to room temperature. Add 10 mL of 95% ethanol and mix. Extract the fat three times with 100 mL diethyl ether-petroleum ether mixture, combine the extracts into a 100 mL flat-bottomed flask, and evaporate the petroleum ether-diethyl ether layer to dryness to obtain the fat. To the fat extract, continue to add 4 mL of 2wt% sodium hydroxide-methanol solution and 4 mL of 14wt% boron trifluoride-methanol solution. Place in a 45°C water bath for 20 minutes. After cooling to room temperature, add 3 mL of n-hexane. alkane, shake and extract for 2 minutes, let stand and separate. The supernatant was filtered through a 0.45 μm filter membrane and analyzed by gas chromatography. The gas chromatography conditions are as follows: chromatographic column TG-FAME (50 m×0.25 mm×0.20 μm); temperature rising program (80 ℃ held for 1 min, heated to 160 ℃ at a rate of 20 ℃/min, kept for 1.5 min, and then heated to 5 ℃ /min rate to 230 ℃ and hold for 6 minutes); inlet temperature 260 ℃; carrier gas flow rate 0.63 mL/min; split ratio 100:1; mass spectrometry conditions: ion source temperature 280 ℃; transfer line temperature 240 ℃; solvent delay Time 4 min; ion source: EI source 70 eV. According to the calculation method given by the national standard GB5009.168-2016, the linoleic acid content is calculated according to the retention time and corresponding peak area and formula (4):

W=(C*V*N)/m*k*10-4 (4)W=(C*V*N)/m*k*10 -4 (4)

式中: W—试样中亚油酸含量,单位为g/100g;C—试样测定液中亚油酸甲酯浓度,单位为mg/L;V—定容体积,单位为mL;k—亚油酸甲酯转化为亚油酸的换算系数;N—稀释倍数;10-4—单位换算系数;m—样品质量,单位为g。In the formula: W—the linoleic acid content in the sample, in g/100g; C—the concentration of methyl linoleate in the sample measurement solution, in mg/L; V—the constant volume, in mL; k —Conversion coefficient for converting methyl linoleate into linoleic acid; N—dilution factor; 10 -4 —Unit conversion coefficient; m—sample mass, in g.

由图7结果可知,COCSUDRAFT_4465基因过表达重组胶球藻株生长优于野生型胶球藻株,其生长周期较野生株缩短48 h,生长速率较野生株提高1.58倍,同步地,油脂合成积累效率也显著高于野生型胶球藻株,油脂含量和油脂产率提高至1.61倍和2.36倍(图8所示),说明过表达COCSUDRAFT_64904基因能够显著促进重组胶球藻株生长和油脂积累。更为重要的是,通过对比重组胶球藻和野生型胶球藻提取的脂肪酸经气相色谱分析(如图9和图10所示 ),发现重组胶球藻株中亚油酸相对含量更为显著地提升(表1所示),具体地,COCSUDRAFT_4465基因过表达重组胶球藻株中亚油酸比例较高,含量和产量分别是野生株的3.23倍和3.05倍(图11所示)。由以上可知,COCSUDRAFT_4465基因过表达有效促进转化胶球藻生长的同时,还积极调控了其胞内油脂尤其是亚油酸的合成积累。It can be seen from the results in Figure 7 that the COCSUDRAFT_4465 gene overexpression recombinant Glycococcus strain grows better than the wild-type Glycococcus strain. Its growth cycle is 48 h shorter than that of the wild strain, and its growth rate is 1.58 times higher than that of the wild strain. Simultaneously, lipids are synthesized and accumulated. The efficiency is also significantly higher than that of the wild-type Glycococcus strain, with the oil content and oil yield increased to 1.61 times and 2.36 times (shown in Figure 8), indicating that overexpression of the COCSUDRAFT_64904 gene can significantly promote the growth and oil accumulation of the recombinant Glycococcus strain. More importantly, by comparing the fatty acids extracted from recombinant Glycococcus and wild-type Glycococcus through gas chromatography analysis (as shown in Figures 9 and 10), it was found that the relative content of linoleic acid in the recombinant Glycococcus strain was higher. Significantly improved (shown in Table 1). Specifically, the COCSUDRAFT_4465 gene overexpression recombinant Glycococcus strain has a higher proportion of linoleic acid, and the content and yield are 3.23 times and 3.05 times that of the wild strain respectively (shown in Figure 11). From the above, it can be seen that overexpression of COCSUDRAFT_4465 gene not only effectively promotes the growth of transformed Glycococcus, but also actively regulates the synthesis and accumulation of intracellular lipids, especially linoleic acid.

表1 COCSUDRAFT_4465基因过表达重组胶球藻和野生型胶球藻脂肪酸相对含量对比Table 1 Comparison of the relative fatty acid content of recombinant Glycococcus overexpressing COCSUDRAFT_4465 gene and wild-type Glycococcus

注:野生株为未转化COCSUDRAFT_4465基因的胶球藻株;转化株为COCSUDRAFT_4465基因过表达重组胶球藻株;星号表示统计分析上有显著差异,t检验,**p<0.01。Note: The wild strain is the Glycococcus strain that has not been transformed with the COCSUDRAFT_4465 gene; the transformed strain is the recombinant Glycococcus strain that overexpresses the COCSUDRAFT_4465 gene; asterisks indicate significant differences in statistical analysis, t test, ** p <0.01.

Claims (10)

1. the coccum fatty acid thioesterase gene is characterized in that the coccum fatty acid thioesterase gene is coccum UDRAFT_4465, the nucleotide sequence of the coccum fatty acid thioesterase gene is shown as SEQ ID NO.1, and the amino acid sequence of the encoded protein of the coccum fatty acid thioesterase gene is shown as SEQ ID NO. 2.
2. The coccoid fatty acid thioesterase gene according to claim 1, wherein said coccoid fatty acid thioesterase gene is obtained under conditions that induce accumulation of coccoid grease.
3. The coccoid algae fatty acid thioesterase gene according to claim 1, wherein said coccoid algae is coccoid algaeCoccomyxa subbellipsoidea C-169。
4. Use of a coccoid fatty acid thioesterase gene according to any one of claims 1 to 3 for increasing linoleic acid synthesis, wherein the accumulation of algal cell linoleic acid synthesis is achieved by overexpression into coccoid by homologous recombination transformation, including PCR amplification and overexpression recombinant construction.
5. The use according to claim 4, wherein the PCR amplification is performed using cDNA reverse transcribed from total RNA of the genus Chlorella as a template, and the designed primers comprise an upstream primer sequence 5'-ATTCCACAACAGCCTTGCGA-3' and a downstream primer sequence 5'-CCAGGTGGTGCGAGCC-3'; the over-expression recombinant construction comprises the steps of designing a primer, amplifying, obtaining a recombinant plasmid and obtaining an over-expression algae strain.
6. The use according to claim 5, wherein the primers are designed based on the COCSUDRAFT_4465 gene and pCAMBIA1303 vector information, and the primer sequences comprise the upstream primer sequence 5'TATGACCATGATTACGAATTCATTCCACAACAGCCTTGCGA-3' and downstream primer sequence 5ACGACGGCCAGTGCCAAGCTTCCAGGTGGTGCGAGCC-3', the two ends of the primer respectively comprise a partial sequence of the vector shown in the dash line and an enzyme cutting site shown in the wavy line as homology arms; the amplification is PCR amplification, and an amplification product has a partial sequence and an enzyme cutting site of a pCAMBIA1303 vector; the method for obtaining the recombinant plasmid is a homologous recombination method, and the COCSUDRAFT_4465 gene is constructed and enters a pCAMBIA1303 vector to obtain the recombinant plasmid; the method for obtaining the over-expression algae strain is to convert the recombinant plasmid into the chlorella by adopting an electrotransformation method, and obtain the recombinant chlorella of positive over-expression COCSUDRAFT_4465 by screening antibiotics and detecting the expression quantity.
7. The use according to claim 6, wherein the reaction system for PCR amplification is: 2.2 to 2.8. Mu.L of cDNA,20 to 30. Mu.L of 2 XHieff Ultra-Rapid Hot Start PCR Master Mix (with Dye), 2.2 to 2.8. Mu.L of each of the upstream and downstream primers, 17.2 to 12.8. Mu.L of ddH 2 O; the PCR amplification procedure was: pre-denaturation is carried out for 2-4 min at 93-97 ℃, denaturation is carried out for 25-35 s at 93-97 ℃, annealing is carried out for 25-35 s at 55-65 ℃, extension is carried out for 6-10 s at 68-74 ℃, and complete extension is carried out for 8-12 min for 30-40 cycles; and (3) purifying and recovering the PCR amplification product by using 0.5-3 wt% agarose gel electrophoresis to obtain the homologous recombination amplification product of the COCSUDRAFT_4465 gene.
8. The use according to claim 6, wherein the homologous recombination method is to carry out homologous recombination reaction on the double digestion products of pCAMBIA1303 and the homologous recombination products of COCSUDRAFT_4465 gene, and the reaction system is as follows: 90~110 ng pCAMBIA1303 double enzyme digestion products, 90~110 ng COCSUDRAFT_4465 gene PCR homologous recombination products, 1.5-2.5 mu L of Exnase II, 3-5 mu L of 5 XCE II Buffer, 7-13 mu L of ddH 2 O, reacting for 25-35 min at 36-38 ℃; the homologous product is transformed into escherichia coli, and positive bacteria containing pCAMBIA1303-COCSUDRAFT_4465 recombinant plasmid are obtained through identification.
9. The use according to claim 6, wherein said obtaining an overexpressed strain of algae is in particular: uniformly mixing 90-110 mu L of heavy suspension chlorella cells with 3-5 mu g of pCAMBIA1303-COCSUDRAFT_4465 recombinant plasmid and 35-45 mu g of salmon sperm DNA, performing electroporation after incubating on ice for 8-12 min, immediately transferring the electroporated chlorella cells into a test tube containing 8-12 mL of Basal culture solution, resuscitating for 18-30 h under dark conditions, transferring to normal light intensity for induction for 18-30 h, centrifuging 3500-4500 g for 8-12 min to collect algae cells, and then re-suspending the algae cells with 0.5-0.8 mL of Basal culture solution, and screening by hygromycin B to obtain primary positive algae; and screening and obtaining the positive recombinant chlorella strain which overexpresses the COCSUDRAFT_4465 gene by an expression quantity detection mode.
10. The use according to any one of claims 4 to 9, further comprising culturing, harvesting, fatty acid extraction and linoleic acid content calculation of transformed coccoid strains, in particular: selecting a positive recombinant monoclonal coccoid strain which overexpresses COCSUDRAFT_4465 gene, inoculating a Basal culture medium to culture until the end of logarithmic stabilization, centrifuging recombinant algae culture solution, cleaning algae mud, drying to obtain algae powder, and weighing the algae powder to obtain recombinant algae biomass; synchronously extracting the obtained recombinant algae powder with an organic solvent to obtain grease, saponifying the grease to obtain fatty acid methyl ester, measuring the fatty acid composition by adopting a GC internal standard method, and calculating to obtain the linoleic acid content.
CN202311703279.5A 2023-12-12 2023-12-12 Glycococcus fatty acid thioesterase gene and its application in improving linoleic acid synthesis Pending CN117660499A (en)

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