CN116813734A - OsEF1A protein, encoding gene and application thereof in promoting rice tillering - Google Patents
OsEF1A protein, encoding gene and application thereof in promoting rice tillering Download PDFInfo
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Abstract
Description
技术领域Technical field
本发明涉及基因工程技术领域,特别是涉及OsEF1A蛋白、编码基因及其在促进水稻分蘖中的应用。The present invention relates to the technical field of genetic engineering, in particular to OsEF1A protein, encoding genes and their application in promoting rice tillering.
背景技术Background technique
稻(Oryza sativa L.),通称水稻,是禾本科一年生水生草本(已有多年生稻品种)。秆直立,高0.5-1.5米,随品种而异。叶鞘无毛、松弛;叶舌披针形;叶片线状披针形,宽约1厘米,无毛,粗糙。圆锥花序大型疏展,棱粗糙;小穗含1成熟花;颖极小,仅在小穗柄先端留下半月形的痕迹,锥刺状;两侧孕性花外稃质厚,具5脉,中脉成脊,表面有方格状小乳状突起,厚纸质,遍布细毛端毛较密,有芒或无芒;内稃与外稃同质,具3脉,先端尖而无喙;雄蕊花药长2-3毫米。颖果长约5毫米,宽约2毫米;胚比约为颖果长的1/4。Rice (Oryza sativa L.), commonly known as rice, is an annual aquatic herb of the family Gramineae (perennial rice varieties already exist). The stalks are upright, 0.5-1.5 meters high, depending on the variety. The leaf sheath is hairless and flaccid; the ligule is lanceolate; the blade is linear-lanceolate, about 1 cm wide, hairless and rough. The panicle is large and sparsely spread, with rough edges; the spikelet contains 1 mature flower; the globule is extremely small, leaving only a half-moon mark on the apex of the spikelet stalk, which is cone-like; the pregnant lemma on both sides is thick and has 5 veins. , the midrib is ridged, with small checkered papillary protrusions on the surface, thick paper, fine hairs all over and dense terminal hairs, with or without awns; the lemma is the same as the lemma, with 3 veins, apex is sharp but without beak; stamens Anthers are 2-3 mm long. The caryopsis is about 5 mm long and 2 mm wide; the embryo ratio is about 1/4 of the caryopsis length.
分蘖数是水稻最重要的农艺性状之一,因为分蘖数直接决定每株穗数,进而影响水稻产量。水稻分蘖的发生可以分为两步:腋芽的形成和腋芽的伸长。目前,已克隆的控制腋芽形成的基因有MOC1、MOC3/TAB1、TAD1/TE、LAX1、LAX2等。MOC1是第一个被克隆的控制水稻分蘖的基因,编码一个GRAS家族转录因子,通过控制腋芽形成影响分蘖。MOC1突变体只有一个主茎而不产生分蘖。独脚金内酯(Strigolactones,SLs)是一类新型的植物激素,参与调控植物分枝和根发育、与共生丛枝菌根真菌和寄生杂草互作等过程。SLs信号抑制水稻分蘖芽的伸长。催化SLs合成(如D27、D17、D10和OsMAX1)和信号转导(如D3、D14、D53、IPA1)的相关基因参与水稻分蘖的调控。其中,IPA1是一个半显性基因,编码OsSPL14转录因子,其表达受到microRNA OsmiR156的调控。该基因点突变阻碍了OsmiR156的作用,产生了分蘖数减少、抗倒伏性增强、产量增加的“理想株型”。近期研究表明,IPA1能够与D53互作,从而作为SL信号途径的下游转录因子发挥作用。尽管目前有多个控制水稻分蘖的基因被克隆,其调控机理基本阐明,但水稻分蘖调控网络中新的基因仍有待鉴定。The number of tillers is one of the most important agronomic traits of rice, because the number of tillers directly determines the number of panicles per plant, which in turn affects rice yield. The occurrence of rice tillering can be divided into two steps: the formation of axillary buds and the elongation of axillary buds. Currently, cloned genes controlling axillary bud formation include MOC1, MOC3/TAB1, TAD1/TE, LAX1, LAX2, etc. MOC1 is the first cloned gene that controls rice tillering. It encodes a GRAS family transcription factor and affects tillering by controlling axillary bud formation. The MOC1 mutant has only one main stem and does not produce tillers. Strigolactones (SLs) are a new class of plant hormones that are involved in regulating plant branching and root development, and interacting with symbiotic arbuscular mycorrhizal fungi and parasitic weeds. SLs signaling inhibits rice tiller bud elongation. Related genes that catalyze the synthesis of SLs (such as D27, D17, D10 and OsMAX1) and signal transduction (such as D3, D14, D53, IPA1) are involved in the regulation of rice tillering. Among them, IPA1 is a semi-dominant gene encoding OsSPL14 transcription factor, and its expression is regulated by microRNA OsmiR156. The point mutation of this gene hinders the function of OsmiR156, resulting in an "ideal plant type" with reduced tiller number, enhanced lodging resistance, and increased yield. Recent studies have shown that IPA1 can interact with D53 and thereby function as a downstream transcription factor in the SL signaling pathway. Although multiple genes controlling rice tillering have been cloned and their regulatory mechanisms have been basically elucidated, new genes in the rice tillering regulatory network still need to be identified.
发明内容Contents of the invention
本发明的目的是提供OsEF1A蛋白、编码基因及其在促进水稻分蘖中的应用。The purpose of the present invention is to provide OsEF1A protein, encoding genes and their application in promoting rice tillering.
为实现上述目的,本发明提供了如下方案:In order to achieve the above objects, the present invention provides the following solutions:
本发明提供一种OsEF1A蛋白,所述OsEF1A蛋白的氨基酸序列如SEQ ID NO:2所示。The present invention provides an OsEF1A protein, the amino acid sequence of the OsEF1A protein is shown in SEQ ID NO: 2.
本发明还提供编码所述OsEF1A蛋白的DNA分子。The present invention also provides DNA molecules encoding the OsEF1A protein.
优选的是,所述DNA分子的核苷酸序列如SEQ ID NO:1所示。Preferably, the nucleotide sequence of the DNA molecule is shown in SEQ ID NO: 1.
本发明还提供含有所述DNA分子的重组载体、表达盒、转基因细胞系或重组菌。The invention also provides recombinant vectors, expression cassettes, transgenic cell lines or recombinant bacteria containing the DNA molecules.
优选的是,所述重组载体包括pCAMBIA1300S-2×35S::OsEF1A。Preferably, the recombinant vector includes pCAMBIA1300S-2×35S::OsEF1A.
本发明还提供扩增所述DNA分子的引物对。The present invention also provides primer pairs for amplifying the DNA molecules.
优选的是,所述引物对包含如SEQ ID NO:3所示的上游引物和如SEQ ID NO:4所示的下游引物。Preferably, the primer pair includes an upstream primer as shown in SEQ ID NO: 3 and a downstream primer as shown in SEQ ID NO: 4.
本发明还提供所述OsEF1A蛋白、所述DNA分子或所述重组载体、表达盒、转基因细胞系或重组菌在促进水稻分蘖中的应用。The present invention also provides the application of the OsEF1A protein, the DNA molecule or the recombinant vector, expression cassette, transgenic cell line or recombinant bacteria in promoting rice tillering.
本发明还提供一种培养多分蘖水稻的方法,其特征在于,将所述DNA分子导入受体水稻,即得。The present invention also provides a method for cultivating multi-tiller rice, which is characterized in that the DNA molecule is introduced into the recipient rice.
优选的是,所述DNA分子通过所述的重组载体、表达盒、转基因细胞系或重组菌导入目的植物。Preferably, the DNA molecule is introduced into the target plant through the recombinant vector, expression cassette, transgenic cell line or recombinant bacteria.
本发明公开了以下技术效果:The invention discloses the following technical effects:
本发明提供了OsEF1A蛋白、编码基因及其在促进水稻分蘖中的应用,所述OsEF1A蛋白能够显著提高日本晴水稻植株的分蘖数,进而提高稻谷产量,为高产水稻新品种的育种提供新途径,提供了一种新的基因资源和重组质粒制备方法,有利于水稻的增产增收具有重要意义。The present invention provides OsEF1A protein, encoding genes and their application in promoting rice tillering. The OsEF1A protein can significantly increase the number of tillers of Nipponbare rice plants, thereby increasing rice yield, providing a new approach to the breeding of new high-yielding rice varieties, and providing A new genetic resource and recombinant plasmid preparation method have been developed, which is of great significance for increasing rice production and income.
附图说明Description of the drawings
为了更清楚地说明本发明实施例或现有技术中的技术方案,下面将对实施例中所需要使用的附图作简单地介绍,显而易见地,下面描述中的附图仅仅是本发明的一些实施例,对于本领域普通技术人员来讲,在不付出创造性劳动的前提下,还可以根据这些附图获得其他的附图。In order to explain the embodiments of the present invention or the technical solutions in the prior art more clearly, the drawings needed to be used in the embodiments will be briefly introduced below. Obviously, the drawings in the following description are only some of the drawings of the present invention. Embodiments, for those of ordinary skill in the art, other drawings can also be obtained based on these drawings without exerting creative efforts.
图1为阳性转基因植株PCR鉴定;其中,M:DNA质量标准物;CK:阴性对照;Figure 1 shows the PCR identification of positive transgenic plants; where, M: DNA quality standard; CK: negative control;
图2为水稻OsEF1A的组织表达,PBI121 OsEF1Apro::GUS阳性植株的根、茎、根茎结合部、小穗花序的GUS染色;Figure 2 shows the tissue expression of OsEF1A in rice, GUS staining of roots, stems, rhizome junctions, and spikelets of PBI121 OsEF1Apro::GUS-positive plants;
图3为OsEF1A亚细胞定位;Figure 3 shows the subcellular localization of OsEF1A;
图4为转基因植株的表型图;Figure 4 is a phenotypic diagram of transgenic plants;
图5为通过荧光定量检测OsEF1A基因的表达量不同。Figure 5 shows the different expression levels of OsEF1A gene detected by fluorescence quantification.
具体实施方式Detailed ways
现详细说明本发明的多种示例性实施方式,该详细说明不应认为是对本发明的限制,而应理解为是对本发明的某些方面、特性和实施方案的更详细的描述。Various exemplary embodiments of the invention will now be described in detail. This detailed description should not be construed as limitations of the invention, but rather as a more detailed description of certain aspects, features and embodiments of the invention.
应理解本发明中所述的术语仅仅是为描述特别的实施方式,并非用于限制本发明。另外,对于本发明中的数值范围,应理解为还具体公开了该范围的上限和下限之间的每个中间值。在任何陈述值或陈述范围内的中间值以及任何其他陈述值或在所述范围内的中间值之间的每个较小的范围也包括在本发明内。这些较小范围的上限和下限可独立地包括或排除在范围内。It should be understood that the terms used in the present invention are only used to describe particular embodiments and are not intended to limit the present invention. In addition, for numerical ranges in the present invention, it should be understood that every intermediate value between the upper and lower limits of the range is also specifically disclosed. Every smaller range between any stated value or value intermediate within a stated range and any other stated value or value intermediate within a stated range is also included within the invention. The upper and lower limits of these smaller ranges may independently be included or excluded from the range.
除非另有说明,否则本文使用的所有技术和科学术语具有本发明所述领域的常规技术人员通常理解的相同含义。虽然本发明仅描述了优选的方法和材料,但是在本发明的实施或测试中也可以使用与本文所述相似或等同的任何方法和材料。本说明书中提到的所有文献通过引用并入,用以公开和描述与所述文献相关的方法和/或材料。在与任何并入的文献冲突时,以本说明书的内容为准。Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs. Although only the preferred methods and materials are described herein, any methods and materials similar or equivalent to those described herein can be used in the practice or testing of the invention. All documents mentioned in this specification are incorporated by reference to disclose and describe the methods and/or materials in connection with which the documents relate. In the event of conflict with any incorporated document, the contents of this specification shall prevail.
在不背离本发明的范围或精神的情况下,可对本发明说明书的具体实施方式做多种改进和变化,这对本领域技术人员而言是显而易见的。由本发明的说明书得到的其他实施方式对技术人员而言是显而易见的。本申请说明书和实施例仅是示例性的。It will be apparent to those skilled in the art that various modifications and changes can be made to the specific embodiments described herein without departing from the scope or spirit of the invention. Other embodiments will be apparent to the skilled person from the description of the invention. The specification and examples are intended to be illustrative only.
关于本文中所使用的“包含”、“包括”、“具有”、“含有”等等,均为开放性的用语,即意指包含但不限于。The words "includes", "includes", "has", "contains", etc. used in this article are all open terms, which mean including but not limited to.
本发明所述技术方案,如未特别说明,均为本领域的常规方案,所用试剂或原料,如未特别说明,均购自商业渠道或是已公开。The technical solutions described in the present invention, unless otherwise specified, are all routine solutions in the field. The reagents or raw materials used, unless otherwise specified, are all purchased from commercial channels or have been disclosed.
实施例1Example 1
1.水稻RNA提取1. Rice RNA extraction
(1)取日本晴水稻叶片在液氮中研磨,加入450μL RL(加入1%β-巯基乙醇),涡旋剧烈震荡混匀。(1) Grind Nipponbare rice leaves in liquid nitrogen, add 450 μL RL (add 1% β-mercaptoethanol), and vortex vigorously to mix.
(2)将所有溶液转移至过滤柱CS上,12000rpm离心3min,小心吸取上清至RNase-Free的离心管中。(2) Transfer all solutions to the filter column CS, centrifuge at 12,000 rpm for 3 minutes, and carefully draw the supernatant into an RNase-free centrifuge tube.
(3)缓慢加入0.5倍上清体积的无水乙醇,混匀,将所有溶液转移至吸附柱CR3中,12000rpm离心60sec,倒掉收集管中的废液。(3) Slowly add 0.5 times the volume of supernatant absolute ethanol, mix well, transfer all solutions to the adsorption column CR3, centrifuge at 12000 rpm for 60 seconds, and pour out the waste liquid in the collection tube.
(4)向吸附柱CR3中加入350μL去蛋白液RW1,12000rpm离心60sec,倒掉收集管中的废液。(4) Add 350 μL of protein-removing solution RW1 to the adsorption column CR3, centrifuge at 12,000 rpm for 60 seconds, and discard the waste liquid in the collection tube.
(5)向吸附柱CR3中央加入80μL的DNaseⅠ工作液(10μL DNaseⅠ储存液+70μL RDD缓冲液),室温放置15min。(5) Add 80 μL of DNaseⅠ working solution (10 μL DNaseⅠ storage solution + 70 μL RDD buffer) to the center of the adsorption column CR3, and leave it at room temperature for 15 minutes.
(6)向吸附柱CR3中加入350μL去蛋白液RW1,12000rpm离心60sec,倒掉收集管中的废液。(6) Add 350 μL of protein-removing solution RW1 to the adsorption column CR3, centrifuge at 12,000 rpm for 60 seconds, and discard the waste liquid in the collection tube.
(7)向吸附柱CR3中加入500μL漂洗液RW,室温静置2min,12000rpm离心60sec,倒掉收集管中的废液。(7) Add 500 μL of rinse solution RW to the adsorption column CR3, let it stand at room temperature for 2 minutes, centrifuge at 12000 rpm for 60 seconds, and discard the waste liquid in the collection tube.
(8)重复步骤7。(8) Repeat step 7.
(9)12000rpm离心2min,倒掉废液。将吸附柱CR3置于室温下放置数分钟,以彻底晾干吸附柱中残留的漂洗液。(9) Centrifuge at 12,000 rpm for 2 minutes and discard the waste liquid. Place the adsorption column CR3 at room temperature for a few minutes to completely dry the residual rinse solution in the adsorption column.
(10)将吸附柱CR3放入一个新的RNase-Free的离心管中,向吸附柱中央悬空滴加50μL RNase-Free ddH2O,12000rpm离心2min,得到RNA溶液。(10) Place adsorption column CR3 into a new RNase-Free centrifuge tube, drop 50 μL RNase-Free ddH 2 O into the center of the adsorption column, and centrifuge at 12,000 rpm for 2 minutes to obtain an RNA solution.
2.反转录cDNA2. Reverse transcription of cDNA
(1)根据表1,在冰上配制反应体系,总体积为10μL。(1) According to Table 1, prepare the reaction system on ice, with a total volume of 10 μL.
表1Table 1
(2)涡旋震荡混匀,短暂离心。(2) Vortex to mix, and centrifuge briefly.
(3)42℃孵育2min。(3) Incubate at 42°C for 2 minutes.
(4)反应结束后,置于冰上冷却。(4) After the reaction is completed, cool it on ice.
(5)根据表2配制反应体系,总体积为20μL。(5) Prepare the reaction system according to Table 2, with a total volume of 20 μL.
表2Table 2
(6)混匀,短暂离心。(6) Mix well and centrifuge briefly.
(7)42℃孵育30min,85℃孵育5min,得到cDNA溶液。(7) Incubate at 42°C for 30 minutes and 85°C for 5 minutes to obtain a cDNA solution.
3.引物设计3. Primer design
检索NCBI数据库查找水稻日本晴基因组,得水稻OsEF1A基因序列,OsEF1A基因序列如SEQ ID NO:1所示,Search the NCBI database to find the rice Nipponbare genome and obtain the rice OsEF1A gene sequence. The OsEF1A gene sequence is shown in SEQ ID NO: 1.
SEQ ID NO:1:SEQ ID NO: 1:
cccgtcctctccttcaagtcagctacctgcttaatcaaccatgggtaaggagaagacgcacatcaacattgtggtcattggccacgtcgactctggcaagtcgaccaccacgggccatctgatctacaagcttggaggtatcgacaagcgtgtgattgagaggttcgagaaggaagccgctgagatgaacaagaggtccttcaagtacgcgtgggtgctcgacaagctcaaggccgagcgtgagagaggtatcaccatcgatattgccctgtggaagttcgagaccaccaagtactactgcacggtcatcgatgcccctggtcaccgtgacttcatcaagaacatgatcacgggtacctcccaggctgactgtgccgtgctcatcattgactccaccactggtggttttgaggctggtatctccaaggatggccagacccgtgagcacgctcttcttgctttcactcttggtgtgaagcagatgatctgctgctgcaacaagatggatgccaccactcccaagtactccaaggcccgttacgatgaaatcgtgaaggaagtctcatcctacctgaagaaggtcggctacaaccctgacaagattcccttcgttcccatctctgggtttgagggtgacaacatgattgagaggtccaccaaccttgactggtacaagggccccaccttgcttgaggctcttgaccagatcaacgagcccaagaggccatcagacaagcccctgcgtcttccccttcaggacgtgtacaagatcggtggtattggcaccgtgcctgtgggtcgtgttgagactggagtcctcaagcctggtatggtggtgacctttggtcccagcggcctgaccactgaggtcaagtcggttgagatgcaccacgaggctctccaggaggctcttcctggtgacaacgtcgggttcaacgtgaagaacgttgcggtgaaggatctgaagcgtgggtacgtggcctccaactccaaggatgaccctgccaaggaggctgccagcttcacctcccaggtgatcatcatgaaccaccctggccagatcggcaacggctacgccccagtgctggactgccacacctcccacattgccgtcaagtttgctgagctggtgaccaagatcgacagacgatctggtaaggagctggagaaggagcccaagttcctcaagaacggtgatgctggtatggttaagatgattcccaccaagcccatggttgtggagaccttctctgagtaccctcctcttggtcgttttgccgtgcgtgacatgaggcaaacggtggctgttggcgtcatcaagaacgtggagaagaaggacccaaccggtgccaaggtgaccaaggctgccgccaagaagaaatgatcctcgttcaagtggtagttttgtgcacggccatggcactcgttgcattgaccgttattatcatatgctcgctgtgtgcactgtgtcgtttaaaactctctattttctgttcggtttaaacttgttctgagcctgattattgcccttcggctgttgtggaatgcgggtatttacattgctaattcctatgtctttattttggcttgtggcattcgcttgttctactgctattgaaaactgtaatctgtttctgttattaaaaactgaaccttttcttctgctatttgaaactgaagcgagtgggtttcaatttgctgaaatcctgctacttgctatttaaattatttatgttcaaaaaaaaaaaaaaaaaa;cccgtcctctccttcaagtcagctacctgcttaatcaaccatgggtaaggagaagacgcacatcaacattgtggtcattggccacgtcgactctggcaagtcgaccaccacgggccatctgatctacaagcttggaggtatcgacaagcgtgtgattgagaggttcgagaaggaagccgctgagatgaacaagaggtccttcaagt acgcgtgggtgctcgacaagctcaaggccgagcgtgagagaggtatcaccatcgatattgccctgtggaagttcgagaccaccaagtactactgcacggtcatcgatgcccctggtcaccgtgacttcatcaagaacatgatcacgggtacctcccaggctgactgtgccgtgctcatcattgactccaccactggtggtttt gaggctggtatctccaaggatggccagaccgtgagcacgctcttcttgctttcactcttggtgtgaagcagatgatctgctgctgcaacaagatggatgccaccactcccaagtactccaaggcccgttacgatgaaatcgtgaaggaagtctcatcctacctgaagaaggtcggctacaaccctgacaagattcccttcgtt cccatctctgggtttgagggtgacaacatgattgagaggtccaccaaccttgactggtacaagggccccaccttgcttgaggctcttgaccagatcaacgagcccaagaggccatcagacaagcccctgcgtcttccccttcaggacgtgtacaagatcggtggtattggcaccgtgcctgtgggtcgtgttgagactggagtcct caagcctggtatggtggtgacctttggtcccagcggcctgaccactgaggtcaagtcggttgagatgcaccacgaggctctccaggaggctcttcctggtgacaacgtcgggttcaacgtgaagaacgttgcggtgaaggatctgaagcgtgggtacgtggcctccaactccaaggatgaccctgccaaggaggctgcc agcttcacctcccaggtgatcatcatgaaccaccctggccagatcggcaacggctacgccccagtgctggactgccacacctcccacattgccgtcaagtttgctgagctggtgaccaagatcgacagacgatctggtaaggagctggagaaggagcccaagttcctcaagaacggtgatgctggtatggttaagatgattcccaccaagcccatggtt gtggagaccttctctgagtaccctcctcttggtcgttttgccgtgcgtgacatgaggcaaacggtggctgttggcgtcatcaagaacgtggagaagaaggacccaaccggtgccaaggtgaccaaggctgccgccaaagaagaaatgatcctcgttcaagtggtagttttgtgcacggccatggcactcgttg cattgaccgttattatcatatgctcgctgtgtgcactgtgtcgtttaaaactctctattttctgttcggtttaaacttgttctgagcctgattattgcccttcggctgttgtggaatgcgggtatttacattgctaattcctatgtctttattttggcttgtggcattcgcttgttctactgctattgaaaact gtaatctgtttctgttattaaaaactgaaccttttcttctgctatttgaaactgaagcgagtgggtttcaatttgctgaaatcctgctacttgctatttaaattatttatgttcaaaaaaaaaaaaaaaaaa;
OsEF1A基因编码的蛋白序列如SEQ ID NO:2所示,The protein sequence encoded by the OsEF1A gene is shown in SEQ ID NO: 2.
SEQ ID NO:2:SEQ ID NO: 2:
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAKKK。MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL LEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKK DPTGAKVTKAAAKKK.
根据载体pCAMBIA1300S的酶切位点设计引物。引物如下:Design primers based on the restriction site of vector pCAMBIA1300S. The primers are as follows:
1300-OsEF1A-BamHI-F:ATGGGTAAGGAGAAGACGCACATCA;1300-OsEF1A-BamHI-F:ATGGGTAAGGAGAAGACGCACATCA;
1300-OsEF1A-PstI-R:AGCGTAATCTGGAACATCGTATGGGTA;1300-OsEF1A-PstI-R: AGCGTAATCTGGAACATCGTATGGGTA;
Hyg-1300-301-F(SEQ ID NO:3):CAAGACCTGCCTGAAACCGAACT;Hyg-1300-301-F (SEQ ID NO: 3): CAAGACCTGCCTGAAACGAACT;
Hyg-1300-741-R(SEQ ID NO:4):GCGCGTCTGCTGCTCCATACA。Hyg-1300-741-R (SEQ ID NO: 4): GGCCGTCTGCTGCTCCATACA.
4.载体构建4. Vector construction
方法包括PCR扩增目的基因,PCR产物的纯化,大肠杆菌质粒的提取,酶切,连接,大肠杆菌的转化,阳性菌落PCR鉴定,质粒酶切鉴定,测序及菌种保存等。Methods include PCR amplification of target genes, purification of PCR products, extraction of E. coli plasmids, enzyme digestion, ligation, transformation of E. coli, PCR identification of positive colonies, identification of plasmid enzyme digestion, sequencing and strain preservation, etc.
利用PCR技术从cDNA中克隆LRK2的CDS,引物同3.引物设计。用BamHI和PstI分别基因片段和表达载体进行双酶切,酶切后的产物分别进行切胶回收。回收后的产物进行连接、转化、阳性克隆鉴定、测序及序列分析,最终获得表达载体:pCAMBIA1300S-2×35S::OsEF1A。Use PCR technology to clone the CDS of LRK2 from cDNA. The primers are the same as 3. Primer design. The gene fragment and expression vector were double digested with BamHI and PstI respectively, and the digested products were recovered by gel cutting respectively. The recovered products were subjected to ligation, transformation, positive clone identification, sequencing and sequence analysis, and finally the expression vector: pCAMBIA1300S-2×35S::OsEF1A was obtained.
5.胶回收5. Glue recycling
SanPrep柱式DNA胶回收试剂盒操作步骡,进行纯化。SanPrep Column DNA Gel Recovery Kit operates step by step for purification.
(1)从琼脂糖凝胶中割下目的片段的胶块,称重。(1) Cut the gel piece of the target fragment from the agarose gel and weigh it.
(2)加入胶块重量5倍的Buffer B2,50℃水浴10min溶胶。(2) Add B2 B2 that is 5 times the weight of the gel block, and sol it in a 50°C water bath for 10 minutes.
(3)将溶液转移至吸附柱中,8000rpm离心30sec。(3) Transfer the solution to the adsorption column and centrifuge at 8000 rpm for 30 seconds.
(4)加入500μL Wash SoLution,9000rpm离心30sec。(4) Add 500 μL Wash SoLution and centrifuge at 9000 rpm for 30 seconds.
(5)重复步骤(4)。(5) Repeat step (4).
(6)空吸附柱9000rpm离心1min。(6) Centrifuge the empty adsorption column at 9000 rpm for 1 minute.
(7)将吸附柱放入一个干净的1,5mL离心管中,向吸附柱中央加入20μLELutionBuffer,室温静置1min,12000rpm,离心1min,得到DNA溶液。(7) Place the adsorption column into a clean 1.5 mL centrifuge tube, add 20 μLElutionBuffer to the center of the adsorption column, let stand at room temperature for 1 min, and centrifuge at 12,000 rpm for 1 min to obtain a DNA solution.
6.连接6.Connect
一般采用4℃,过夜连接,连接反应体系如表3,反应体系体积(共10μL):Generally, ligation is performed overnight at 4°C. The ligation reaction system is as shown in Table 3. The volume of the reaction system (10 μL in total):
表3table 3
7.大肠杆菌感受态制备7. Preparation of E. coli competent cells
(1)取菌株,在LB培养基上划线,37℃培养过夜。(1) Take the strain, streak it on LB medium, and culture it at 37°C overnight.
(2)在LB平板上挑取单克隆菌落,接种于5mL左右的LB液体培养基中,37℃,250rpm培养过夜。(2) Pick a single colony on the LB plate, inoculate it into about 5 mL of LB liquid culture medium, and culture it overnight at 37°C and 250 rpm.
(3)将菌液以1:50的比例接种于50mL LB液体培养基中,37℃,250rpm培养1-2h,直至菌液OD600为0.5-0.6之间。(3) Inoculate the bacterial solution into 50 mL LB liquid medium at a ratio of 1:50, and culture it at 37°C and 250 rpm for 1-2 hours until the OD 600 of the bacterial solution is between 0.5-0.6.
(4)将菌液转入50mL离心管中,预冷30min。(4) Transfer the bacterial solution into a 50mL centrifuge tube and pre-cool for 30 minutes.
(5)4℃,4000rpm离心10min。弃上清。(5) Centrifuge at 4°C and 4000rpm for 10 minutes. Discard supernatant.
(6)加入5mL SSCS溶液,悬浮细胞。(6) Add 5mL SSCS solution to suspend the cells.
(7)分装到1.5mL离心管(提前遇冷)中,每管100μL。(7) Dispense into 1.5mL centrifuge tubes (cool in advance), 100μL per tube.
(8)液氮速冻,然后转移-80℃保存。(8) Quick freeze in liquid nitrogen, then transfer to -80°C for storage.
8.大肠杆菌转化8. E. coli transformation
(1)从-80℃中取出感受态,冰上融化,将连接产物加入并用枪轻轻打匀,冰浴30min。(1) Take out the competent state from -80℃, melt it on ice, add the ligation product and mix gently with a gun, and keep in ice bath for 30 minutes.
(2)42℃热激90s,马上转移到冰上。冰浴10min。(2) Heat shock at 42°C for 90 seconds and immediately transfer to ice. Ice bath for 10 minutes.
(3)加入700μL LB液体培养基,37℃180rpm培养1h。(3) Add 700 μL LB liquid medium and incubate at 37°C and 180 rpm for 1 hour.
(4)涂布于LB固体培养基上(含抗生素),超净台吹干。(4) Apply on LB solid culture medium (containing antibiotics) and blow dry on a clean bench.
(5)倒放于37℃生化培养箱,培养过夜。(5) Place upside down in a 37°C biochemical incubator and incubate overnight.
9.阳性克隆鉴定及测序9. Positive clone identification and sequencing
(1)PCR鉴定(1)PCR identification
用Taq Plus DNA Polymerase进行PCR鉴定,反应体系见表4,总体积10μL。(在转化的平板挑取单菌落,做好编号,用10μL的枪头轻轻的碰触单个菌落,放PCR管中轻轻搅拌一下,作为模板)。Use Taq Plus DNA Polymerase for PCR identification. The reaction system is shown in Table 4. The total volume is 10 μL. (Pick a single colony from the transformed plate, number it, gently touch a single colony with a 10 μL pipette tip, put it in a PCR tube and stir it gently to use as a template).
表4Table 4
反应程序见表5:The reaction procedure is shown in Table 5:
表5table 5
(2)送测(2)Send for testing
将构建好的载体送至上海英骏生物技术有限公司测序部进行测序。The constructed vector was sent to the sequencing department of Shanghai Yingjun Biotechnology Co., Ltd. for sequencing.
10.质粒DNA提取10. Plasmid DNA extraction
(1)取1-5mL过夜培养的菌液加入1.5mL离心管中,13,000rpm离心30sec,收集菌体沉淀,吸弃上清。(1) Add 1-5 mL of the bacterial liquid cultured overnight into a 1.5 mL centrifuge tube, centrifuge at 13,000 rpm for 30 seconds, collect the bacterial sediment, and discard the supernatant.
(2)向留有菌体沉淀的离心管中加入250μL Buffer P1,涡旋振荡器充分混匀,悬浮菌体沉淀。(2) Add 250 μL Buffer P1 to the centrifuge tube containing the bacterial sediment, mix thoroughly with a vortex shaker, and suspend the bacterial sediment.
(3)向离心管中加入250μL Buffer P2,温和地上下颠倒混匀4-6次,充分混匀使菌体裂解。(3) Add 250 μL Buffer P2 to the centrifuge tube, mix gently by inverting up and down 4-6 times, and mix thoroughly to lyse the bacteria.
(4)向离心管中加入350μL Buffer N3,立即温和地上下颠倒混匀8-10次,充分混匀,此时应出现白色絮状沉淀。13,000rpm离心5min。(4) Add 350 μL Buffer N3 to the centrifuge tube, immediately mix gently by inverting up and down 8-10 times, and mix thoroughly. A white flocculent precipitate should appear at this time. Centrifuge at 13,000rpm for 5min.
(5)将步骤4中所得的上清液转移到已装入收集管的吸附柱中,13000rpm离心30sec,倒掉收集管中的废液,将吸附柱重新放回收集管中。(5) Transfer the supernatant obtained in step 4 to the adsorption column installed in the collection tube, centrifuge at 13,000 rpm for 30 seconds, pour out the waste liquid in the collection tube, and put the adsorption column back into the collection tube.
(6)向吸附柱中加入150μL Buffer PB,13,000rpm离心30sec。(6) Add 150 μL Buffer PB to the adsorption column and centrifuge at 13,000 rpm for 30 seconds.
(7)向吸附柱中加入400μL Buffer PW,13,000rpm离心1min,倒掉收集管中的废液。(7) Add 400 μL Buffer PW to the adsorption column, centrifuge at 13,000 rpm for 1 min, and discard the waste liquid in the collection tube.
(8)将吸附柱置于一个新的离心管中,向吸附膜的中间部位加入50μL Buffer EB,室温放置2分钟,13,000rpm离心1min,得到质粒DNA溶液。(8) Place the adsorption column in a new centrifuge tube, add 50 μL Buffer EB to the middle of the adsorption membrane, leave it at room temperature for 2 minutes, and centrifuge at 13,000 rpm for 1 min to obtain a plasmid DNA solution.
11.农杆菌感受态制备11. Preparation of Agrobacterium competent cells
(1)-80℃取出GV3101菌株,在加有50mg/mLRif的LB培养基平板上划线,28℃培养2d。(1) Take out the GV3101 strain at -80°C, streak it on the LB medium plate supplemented with 50 mg/mL Rif, and culture it at 28°C for 2 days.
(2)挑取单克隆1-10个,接种于250mL含有50mg/mL Rif的LB液体培养基中,培养28℃培养至OD600=0.5。(2) Pick 1-10 single clones, inoculate them into 250 mL of LB liquid medium containing 50 mg/mL Rif, and culture at 28°C until OD 600 = 0.5.
(3)转移菌液至1.5mL离心管中,冰上放置30min。(3) Transfer the bacterial solution to a 1.5mL centrifuge tube and place it on ice for 30 minutes.
(4)5000rpm离心5min,弃上清。(4) Centrifuge at 5000rpm for 5 minutes and discard the supernatant.
(5)加入750μL预冷0.15M/L的NaCl轻轻悬浮细胞,冰上放置20min。(5) Add 750 μL of pre-cooled 0.15M/L NaCl to gently suspend the cells and place on ice for 20 minutes.
(6)5000rpm离心5min,弃上清。(6) Centrifuge at 5000rpm for 5 minutes and discard the supernatant.
(7)加入100μL预冷的含15%甘油的20mM/L CaCl2的溶液轻轻悬浮细胞。(7) Add 100 μL of pre-cooled 20mM/L CaCl2 solution containing 15% glycerol and gently suspend the cells.
(8)液氮速冻,置于-80℃保存。(8) Quick freeze in liquid nitrogen and store at -80°C.
12.农杆菌热激转化12. Agrobacterium heat shock transformation
(1)取-80℃保存的农杆菌感受态,置于冰浴中20min,待其解冻。(1) Take the competent Agrobacterium stored at -80°C and place it in an ice bath for 20 minutes until it thaws.
(2)取5μL阳性质粒加入感受态中,轻轻吸打混匀,置于冰上30min。(2) Add 5 μL of positive plasmid to the competent cells, mix gently by pipetting, and place on ice for 30 minutes.
(3)将感受态置于液氮中冷冻3min,迅速置于37℃水浴5min,取出后冰上放置5min。(3) Freeze the competent state in liquid nitrogen for 3 minutes, quickly place it in a 37°C water bath for 5 minutes, take it out and place it on ice for 5 minutes.
(4)加入600μL LB液体培养基,放置28℃摇床复苏,250rpm,1h。(4) Add 600 μL of LB liquid culture medium and place on a shaker at 28°C for recovery, 250 rpm, for 1 hour.
(5)将菌液均匀涂布在含有Rif和Kan抗性的固体培养基上。(5) Evenly spread the bacterial solution on the solid medium containing Rif and Kan resistance.
(6)将涂好的培养基放在28℃培养箱,倒置培养48h。(6) Place the coated culture medium in a 28°C incubator and incubate it upside down for 48 hours.
13.OsEF1A基因过表达水稻株系的构建13.Construction of OsEF1A gene overexpression rice lines
(1)转基因水稻的获得:(1) Obtaining transgenic rice:
①水稻受体:日本晴;①Rice receptor: Nipponbare;
②所需培养基(液):②Required culture medium (liquid):
a.诱导愈伤的培养基(pH值5.8):N6D+2mg/L 2,4-D;a. Medium for callus induction (pH value 5.8): N6D+2mg/L 2,4-D;
b.农杆菌侵染液(pH值5.2):AAM+10-20mg/L AS;b. Agrobacterium infection solution (pH value 5.2): AAM+10-20mg/L AS;
c.侵染后愈伤共培养的培养基(pH值5.2):N6D+2mg/L 2,4-D+10-20mg/L AS;c. Medium for callus co-culture after infection (pH value 5.2): N6D+2mg/L 2,4-D+10-20mg/L AS;
d.筛选培养基(pH值5.8):N6D+2mg/L 2,4-D+500mg/L Cef+100-150mg/L的相应抗生素(G418或Kan);d. Screening medium (pH value 5.8): N6D+2mg/L 2,4-D+500mg/L Cef+100-150mg/L corresponding antibiotic (G418 or Kan);
e.分化培养基(pH值5.8):RE-Ⅲ+0.02mg/L NAA+2mg/L KT+125mg/LCef+70-100mg/L的相应抗生素(G418或Kan);e. Differentiation medium (pH value 5.8): RE-III+0.02mg/L NAA+2mg/L KT+125mg/LCef+70-100mg/L corresponding antibiotic (G418 or Kan);
f.生根培养基:HF+125mg/L Cef+70mg/L的相应抗生素(G418或Kan);pH值5.8;f. Rooting medium: HF+125mg/L Cef+70mg/L corresponding antibiotic (G418 or Kan); pH value 5.8;
③操作步骤:③Operating steps:
Ⅰ.水稻愈伤组织的诱导。Ⅰ. Induction of rice callus.
Ⅱ.农杆菌侵染。Ⅱ. Agrobacterium infection.
Ⅲ.水稻愈伤的共培养。Ⅲ. Co-culture of rice callus.
Ⅳ.脱菌及筛选抗性愈伤。Ⅳ.Debacterization and screening of resistant calli.
Ⅴ.抗性愈伤的分化。Ⅴ. Differentiation of resistant callus.
Ⅵ.分化苗的生根及炼苗。Ⅵ. Rooting and hardening of differentiated seedlings.
(2)转基因植株阳性鉴定(2) Positive identification of transgenic plants
按照Taq Plus DNA Polymerase说明书进行操作。Follow the Taq Plus DNA Polymerase instructions.
利用质粒载体pCambia1300潮霉素磷酸转移酶基因(Hyg-1300-301-F和Hyg-1300-741-R),以组培再生苗植株叶组织DNA为模板进行PCR鉴定,阴性对照(CK)为日本晴DNA。反应体系见表6:The plasmid vector pCambia1300 hygromycin phosphotransferase gene (Hyg-1300-301-F and Hyg-1300-741-R) was used to conduct PCR identification using tissue culture regenerated seedling leaf tissue DNA as a template. The negative control (CK) was Nipponbare DNA. The reaction system is shown in Table 6:
表6Table 6
反应程序见表7:The reaction procedure is shown in Table 7:
表7Table 7
反应结束后,凝胶电泳检测实验结果如图1所示。After the reaction, the results of the gel electrophoresis detection experiment are shown in Figure 1.
14.OsEF1A启动子表达分析14.OsEF1A promoter expression analysis
PBI121 OsEF1A pro::GUS载体含有GUS报告基因,转基因植株的组织部位(根、茎、叶、鞘等)若能被GUS染液染上蓝色,则说明此植株为阳性。GUS染液配制见表8。取特定的水稻组织浸没于GUS染色液中,抽真空处理15min,37℃过夜;除去GUS染液,用脱色液(V乙醇:V乙酸=3:1)洗去水稻植株材料的本底颜色。用OLYMPUS SZX16体视显微镜观察拍照如图2所示,4℃保存。The PBI121 OsEF1A pro::GUS vector contains the GUS reporter gene. If the tissue parts (roots, stems, leaves, sheaths, etc.) of the transgenic plant can be stained blue by the GUS dye, it means that the plant is positive. The preparation of GUS dye solution is shown in Table 8. Immerse the specific rice tissue in the GUS staining solution, vacuum it for 15 minutes, and leave it at 37°C overnight; remove the GUS staining solution, and use a decolorizing solution (V ethanol : V acetic acid = 3:1) to wash away the background color of the rice plant material. Use OLYMPUS SZX16 stereomicroscope to observe and take pictures as shown in Figure 2, and store at 4°C.
表8 1×GUS染液配方Table 8 1×GUS dye solution formula
15.OsEF1A亚细胞定位15. Subcellular localization of OsEF1A
(1)将OsEF1A与CFP基因融合表达载体,利用基因枪法,将35S::CFP:OsEF1A导入洋葱表皮细胞。(1) Fusion expression vector of OsEF1A and CFP genes, and introduce 35S::CFP:OsEF1A into onion epidermal cells using biolistic method.
(2)培养及观察(2)Cultivation and observation
注射完成后,将植株放回培养箱,常规培养2天即可剪下叶片,用激光扫描共聚焦显微镜观察。After the injection is completed, the plants are returned to the incubator. After 2 days of regular cultivation, the leaves can be cut and observed with a laser scanning confocal microscope.
结果如图3所示,亚细胞定位表达OsEF1A基因表达激光共聚焦显微观察显示主要定位于细胞膜、细胞骨架和细胞核。The results are shown in Figure 3. Subcellular localization expression of OsEF1A gene expression was observed by laser confocal microscopy and showed that it was mainly located in the cell membrane, cytoskeleton and nucleus.
16.转基因构建了OE-1和OE-4株系两个OsEF1A基因过表达株系,将日本晴、转基因植株OE-1和OE-4分别进行种植,常规管理如图4所示。通过荧光定量检测OsEF1A基因的表达量不同,检测结果如图5所示。统计并记录分蘖数见表9。16. Two OsEF1A gene overexpression lines, OE-1 and OE-4, were genetically constructed. Nipponbare and transgenic plants OE-1 and OE-4 were planted respectively. The routine management is shown in Figure 4. The different expression levels of OsEF1A gene were detected by fluorescence quantification, and the detection results are shown in Figure 5. Count and record the number of tillers as shown in Table 9.
表9分蘖数统计Table 9 Tiller number statistics
注:NIP株系为日本晴,OE-1株系和OE-4株系为过表达OsEF1A株系。Note: The NIP strain is Nipponbare, and the OE-1 strain and OE-4 strain are OsEF1A overexpression strains.
如表9所示,过表达OsEF1A基因的转基因日本晴水稻植株的分蘖数显著高于日本晴,进而提高稻谷产量,为高产水稻新品种的育种提供新途径,对于提供了一种新的基因资源和重组质粒制备方法,有利于水稻的增产增收具有重要意义。As shown in Table 9, the tiller number of transgenic Nipponbare rice plants overexpressing the OsEF1A gene is significantly higher than that of Nipponbare, thereby increasing rice yield, providing a new way for the breeding of new high-yielding rice varieties, and providing a new genetic resource and recombination Plasmid preparation methods are of great significance for increasing rice production and income.
以上所述的实施例仅是对本发明的优选方式进行描述,并非对本发明的范围进行限定,在不脱离本发明设计精神的前提下,本领域普通技术人员对本发明的技术方案做出的各种变形和改进,均应落入本发明权利要求书确定的保护范围内。The above-described embodiments only describe preferred modes of the present invention and do not limit the scope of the present invention. Without departing from the design spirit of the present invention, those of ordinary skill in the art can make various modifications to the technical solutions of the present invention. All deformations and improvements shall fall within the protection scope determined by the claims of the present invention.
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