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CN116370446A - Composition, method and application for realizing anti-inflammatory effect by regulating specific skin microorganisms - Google Patents

Composition, method and application for realizing anti-inflammatory effect by regulating specific skin microorganisms Download PDF

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CN116370446A
CN116370446A CN202310083326.4A CN202310083326A CN116370446A CN 116370446 A CN116370446 A CN 116370446A CN 202310083326 A CN202310083326 A CN 202310083326A CN 116370446 A CN116370446 A CN 116370446A
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袁圆
吕奉祥
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Abstract

The invention discloses a composition for realizing anti-inflammatory effect by regulating and controlling specific skin microorganisms, which comprises a carbon source and a nitrogen source; the carbon source is selected from one or more of saccharide isomer, sphingomonas fermentation product extract, glycerol, sodium hyaluronate and trehalose; the nitrogen source is one or more selected from recombinant type I collagen, recombinant type III collagen, recombinant type XVII collagen, arginine, cocoyl glutamic acid TEA salt and ceramide. The invention also discloses a method for realizing anti-inflammatory effect by regulating specific skin microorganisms and application of the composition. The invention can effectively help the stabilization of skin microecology, resist the colonization of conditional pathogenic bacteria and reduce the risk of skin diseases.

Description

一种通过调控特定皮肤微生物实现抗炎效果的组合物及方法 和应用A composition and method for achieving anti-inflammatory effects by regulating specific skin microorganisms and application

技术领域technical field

本发明属于生物技术领域,具体涉及一种通过调控特定皮肤微生物实现抗炎效果的组合物及方法和应用。The invention belongs to the field of biotechnology, and in particular relates to a composition, method and application for realizing anti-inflammatory effects by regulating specific skin microorganisms.

背景技术Background technique

现有人体与共生微生物组成的超级生物体可以被看作是一个会“走路”的生物反应器。人体摄入的食物中不能被自身消化吸收的部分以及人自身分泌到肠腔的物质如黏蛋白等,可以被看作是肠道菌群的“培养基”,改变进入反应器的培养基的营养组成是改变其中微生物组成的有效方法。对于人体的皮肤而言,皮肤微生物组,也是类似的情况和逻辑。化妆品和皮肤自身分泌的物质,都可以被皮肤微生物发酵,进而影响皮肤的生理功能。越来越多的研究表明,皮肤微生物及其代谢物在皮肤屏障和功能上发挥着非常重要的作用,甚至能参与皮肤基底层一些免疫细胞的极化,从而影响皮肤的生理和免疫反应。例如表皮葡萄球菌的脂肽(lipopoly-peptide)还能刺激角质细胞分泌抗菌肽,来抵抗病原菌在皮肤的定植和繁衍。因此深入研究皮肤微生物组,并基于对皮肤微生物组的研究开发新技术,在化妆品配方开发和功能原料开发上有巨大的机会。The existing super organism composed of human body and symbiotic microorganisms can be regarded as a "walking" bioreactor. The part of the food ingested by the human body that cannot be digested and absorbed by the human body and the substances secreted by the human body into the intestinal cavity, such as mucin, can be regarded as the "culture medium" of the intestinal flora, changing the quality of the medium entering the reactor. Nutrient composition is an effective way to alter the microbial composition within them. For human skin, the skin microbiome is a similar situation and logic. Both cosmetics and substances secreted by the skin can be fermented by skin microorganisms, thereby affecting the physiological functions of the skin. More and more studies have shown that skin microbes and their metabolites play a very important role in skin barrier and function, and can even participate in the polarization of some immune cells in the basal layer of the skin, thereby affecting the physiological and immune responses of the skin. For example, the lipopoly-peptide of Staphylococcus epidermidis can also stimulate keratinocytes to secrete antimicrobial peptides to resist the colonization and reproduction of pathogenic bacteria in the skin. Therefore, in-depth research on the skin microbiome and the development of new technologies based on the research on the skin microbiome have huge opportunities in the development of cosmetic formulations and functional raw materials.

肠道微生物组的大量研究揭示,短链脂肪酸参与了人体很多的生理过程,例如增加脂肪细胞的胰岛素敏感性,为肠道上皮细胞提供营养,维持肠道屏障的健康等等。也有研究表明,在化妆品配方里引入短链脂肪酸,也能帮助修复皮肤屏障,起到舒缓等功效。通过在配方中引入短链脂肪酸的方式可以直接的利用短链脂肪酸的生物学功能帮助修复皮肤屏障等作用,但也有一些限制,体现在:短链脂肪酸分子量小,皮肤渗透性较强,因此有刺激性风险;短链脂肪酸挥发性较强,对配方工艺有较高的要求;同时因为水溶性好,在使用后,可能因为渗透或者汗水等原因,无法长时间停留在皮肤,发挥持久性的效果;短链脂肪酸有一定的特殊性气味,对配方的调香等都提出了新的要求。A large number of studies on the intestinal microbiome have revealed that short-chain fatty acids are involved in many physiological processes in the human body, such as increasing the insulin sensitivity of fat cells, providing nutrition for intestinal epithelial cells, maintaining the health of the intestinal barrier, and so on. Studies have also shown that the introduction of short-chain fatty acids into cosmetic formulations can also help repair the skin barrier and play a soothing role. By introducing short-chain fatty acids into the formula, the biological functions of short-chain fatty acids can be directly used to help repair the skin barrier, but there are also some limitations, which are reflected in: short-chain fatty acids have small molecular weight and strong skin permeability, so they have Irritation risk; short-chain fatty acids are highly volatile, and have high requirements for formulation technology; at the same time, because of their good water solubility, they may not stay on the skin for a long time after use due to penetration or sweat, and play a long-lasting role. Effect: short-chain fatty acids have a certain special smell, which puts forward new requirements for the fragrance of the formula.

发明内容Contents of the invention

鉴于上述短链脂肪酸应用于皮肤修复的各类限制,第一方面,本发明公开了一种通过调控特定皮肤微生物实现抗炎效果的组合物,包括碳源和氮源;所述碳源选自糖类同分异构体、鞘氨醇单胞菌发酵产物提取物、甘油、透明质酸钠、海藻糖中的一种或多种;所述氮源选自重组I型胶原蛋白、重组III型胶原蛋白、重组XVII型胶原蛋白、精氨酸、椰油酰谷氨酸TEA盐、神经酰胺中的一种或多种。In view of the various limitations of the application of the above-mentioned short-chain fatty acids to skin repair, in the first aspect, the present invention discloses a composition that achieves an anti-inflammatory effect by regulating specific skin microorganisms, including a carbon source and a nitrogen source; the carbon source is selected from One or more of sugar isomers, Sphingomonas fermentation product extract, glycerin, sodium hyaluronate, and trehalose; the nitrogen source is selected from recombinant type I collagen, recombinant III One or more of type collagen, recombinant type XVII collagen, arginine, cocoyl glutamic acid TEA salt, and ceramide.

在一些实施方案中,所述碳源为碳水化合物;所述氮源为蛋白质。In some embodiments, the carbon source is carbohydrate; the nitrogen source is protein.

在一些实施方案中,所述碳水化合物为人源的碳水化合物;所述蛋白质为人源的蛋白质。In some embodiments, the carbohydrate is a carbohydrate of human origin; the protein is a protein of human origin.

在一些实施方案中,所述碳源和所述氮源进行配合用于微生物发酵,使得通过所述微生物生产的丁酸的含量是同样条件下采用不含有所述组合物进行所述微生物发酵产丁酸的1.2~7.9倍。进一步地,为1.5~7.8倍。In some embodiments, the carbon source and the nitrogen source are used in combination for microbial fermentation, so that the content of butyric acid produced by the microorganism is the same as that produced by the microbial fermentation without the composition under the same conditions. 1.2 to 7.9 times that of butyric acid. Furthermore, it is 1.5 to 7.8 times.

在一些实施方案中,被作为发酵培养基的组成成分用微生物生产丁酸;优选地所述碳源在所述发酵培养基中的浓度为0.1%~3%,优选为0.2%~2%,更优选为0.5%~1%;所述氮源在所述发酵培养基中的浓度为0.1%~3%,优选为0.2%~2%,更优选为0.25%~1%。In some embodiments, butyric acid is produced by microorganisms as a component of the fermentation medium; preferably, the concentration of the carbon source in the fermentation medium is 0.1% to 3%, preferably 0.2% to 2%, More preferably 0.5%-1%; the concentration of the nitrogen source in the fermentation medium is 0.1%-3%, preferably 0.2%-2%, more preferably 0.25%-1%.

在一些实施方案中,所述碳源与所述氮源的浓度比为1:(0.1~3),优选为1:(0.25~2.5),更优选为1:(0.5~2)。In some embodiments, the concentration ratio of the carbon source to the nitrogen source is 1:(0.1-3), preferably 1:(0.25-2.5), more preferably 1:(0.5-2).

在一些实施方案中,所述组合物为通过快速筛选具有皮肤抗炎效果的原料的评价方法筛选获得的具有皮肤抗炎效果的原料;In some embodiments, the composition is a raw material with skin anti-inflammatory effect screened by an evaluation method for rapid screening of raw materials with skin anti-inflammatory effect;

所述快速筛选具有皮肤抗炎效果的原料的评价方法包括以下步骤:The evaluation method for the rapid screening of raw materials with skin anti-inflammatory effect comprises the following steps:

S1、通过NGS测序或者公共数据库检索获得目标菌株基因组草图数据;S1. Obtain the draft genome data of the target strain through NGS sequencing or public database retrieval;

S2、将所述目标菌株基因组草图数据经基因预测软件预测基因;S2. Using the gene prediction software to predict genes from the draft genome data of the target strain;

S3、通过收集短链脂肪酸合成通路上关键基因的核酸序列,利用多序列比对软件做多序列比对,输出序列比对的STOCKHOLM格式,再利用hmmer软件构建短链脂肪酸合成通路上关键基因的隐马尔可夫模型;每个关键基因对应一个隐马尔可夫模型,故短链脂肪酸合成通路上存在n个关键基因则对应n个所述短链脂肪酸合成通路上关键基因的隐马尔可夫模型,n>0;利用所述短链脂肪酸合成通路上关键基因的隐马尔可夫模型判定所述步骤S2预测的每个基因是否为短链脂肪酸合成通路上的关键基因:若所述目标菌株具有短链脂肪酸合成通路上的关键基因,则所述目标菌株产短链脂肪酸的可能性大;反之则小;根据所述目标菌株具备的短链脂肪酸合成通路上的关键基因种类确定所述目标菌株产短链脂肪酸的合成通路,从而划定原料的选择范围以及构建目标菌株库;S3. By collecting the nucleic acid sequences of key genes in the short-chain fatty acid synthesis pathway, use multiple sequence alignment software to perform multiple sequence alignments, output the sequence alignment in STOCKHOLM format, and then use hmmer software to construct the key genes in the short-chain fatty acid synthesis pathway Hidden Markov model; each key gene corresponds to a hidden Markov model, so there are n key genes on the short-chain fatty acid synthesis pathway, which corresponds to the hidden Markov model of n key genes on the short-chain fatty acid synthesis pathway , n>0; use the hidden Markov model of key genes on the short-chain fatty acid synthesis pathway to determine whether each gene predicted in step S2 is a key gene on the short-chain fatty acid synthesis pathway: if the target strain has key genes on the short-chain fatty acid synthesis pathway, the possibility of the target strain producing short-chain fatty acids is large; otherwise, it is small; determine the target strain according to the key gene types on the short-chain fatty acid synthesis pathway possessed by the target strain Synthetic pathway for producing short-chain fatty acids, so as to delineate the selection range of raw materials and construct the target strain library;

S4、将从所述目标菌株库中选定的目标菌株和划定范围内的待筛选原料按照设定的比率和条件进行发酵共培养,得到发酵共培养液;S4. Ferment and co-culture the target strains selected from the target strain library and the raw materials to be screened within the defined range according to the set ratio and conditions to obtain a fermentation co-culture solution;

S5、采用靶向的GC-MS分析测定方法,测定所述发酵共培养液中的短链脂肪酸含量;S5. Determining the content of short-chain fatty acids in the fermentation co-culture solution by using a targeted GC-MS analysis and determination method;

S6、用于利于UVB照射角质细胞,触发所述角质细胞的IL-6表达,再加入所述发酵共培养液检测IL-6表达下降情况得到所述发酵共培养液的IL-6抑制效果,实现评估所述待筛选原料的皮肤抗炎效果的目的;评估标准为IL-6抑制效果越好则所述待筛选原料的皮肤抗炎效果越好。S6. It is used to irradiate keratinocytes with UVB to trigger the expression of IL-6 in the keratinocytes, and then add the fermentation co-culture solution to detect the decrease of IL-6 expression to obtain the IL-6 inhibitory effect of the fermentation co-culture solution, The purpose of evaluating the skin anti-inflammatory effect of the raw material to be screened is realized; the evaluation standard is that the better the IL-6 inhibitory effect is, the better the skin anti-inflammatory effect of the raw material to be screened is.

进一步地,所述基因预测软件为prokka软件;所述多序列比对软件为clustalo软件。Further, the gene prediction software is prokka software; the multiple sequence alignment software is clustalo software.

在一些实施方案中,所述短链脂肪酸为乙酸,丙酸,丁酸,异丁酸,戊酸,异戊酸,己酸中的一种或多种。优选为丁酸。In some embodiments, the short-chain fatty acid is one or more of acetic acid, propionic acid, butyric acid, isobutyric acid, valeric acid, isovaleric acid, and caproic acid. Butyric acid is preferred.

在一些实施方案中,所述目标菌株为从皮肤或者人体其他组织来源的微生物。进一步地,所述基因组草图为现有技术已公开的基因组草图,或者为测序组装获得。In some embodiments, the target strain is a microorganism derived from skin or other tissues of the human body. Further, the draft genome is a draft genome that has been published in the prior art, or is obtained through sequencing and assembly.

在一些实施方案中,丁酸的合成通路包括4条,分别为第一通路、第二通路、第三通路和第四通路,且这4条合成通路涉及3个共有基因;所述3个共有基因分别对应的关键基因的隐马尔可夫模型为bcd.hmm、etfA.hmm、etfB.hmm;所述第一通路对应的关键基因的隐马尔可夫模型有thl.hmm、bhbd.hmm、cro.hmm、but.hmm、buk.hmm;所述第二通路对应的关键基因的隐马尔可夫模型有gctA.hmm、gctB.hmm、hgCoAdA.hmm、hgCoAdB.hmm、hgCoAdC.hmm、gcdA.hmm、gcdB.hmm;所述第三通路对应的关键基因的隐马尔可夫模型有4hbt.hmm、abfD.hmm、abfH.hmm;所述第三通路对应的关键基因的隐马尔可夫模型有kamA.hmm、kamD.hmm、kamE.hmm、kdd.hmm、kce.hmm、kal.hmm、atoA.hmm、AtoD.hmm;In some embodiments, the synthesis pathway of butyric acid includes 4 pathways, respectively the first pathway, the second pathway, the third pathway and the fourth pathway, and these 4 synthesis pathways involve 3 common genes; the 3 common The hidden Markov models of the key genes corresponding to the genes are bcd.hmm, etfA.hmm, etfB.hmm; the hidden Markov models of the key genes corresponding to the first pathway are thl.hmm, bhbd.hmm, cro .hmm, but.hmm, buk.hmm; the hidden Markov models of key genes corresponding to the second pathway include gctA.hmm, gctB.hmm, hgCoAdA.hmm, hgCoAdB.hmm, hgCoAdC.hmm, gcdA.hmm , gcdB.hmm; the hidden Markov model of the key gene corresponding to the third pathway has 4hbt.hmm, abfD.hmm, abfH.hmm; the hidden Markov model of the key gene corresponding to the third pathway has kamA .hmm, kamD.hmm, kamE.hmm, kdd.hmm, kce.hmm, kal.hmm, atoA.hmm, AtoD.hmm;

上述所列bcd.hmm、etfA.hmm、etfB.hmm、thl.hmm、bhbd.hmm、cro.hmm、but.hmm、buk.hmm、gctA.hmm、gctB.hmm、hgCoAdA.hmm、hgCoAdB.hmm、hgCoAdC.hmm、gcdA.hmm、gcdB.hmm、4hbt.hmm、abfD.hmm、abfH.hmm、kamA.hmm、kamD.hmm、kamE.hmm、kdd.hmm、kce.hmm、kal.hmm、atoA.hmm、AtoD.hmm均为所述短链脂肪酸合成通路上关键基因的隐马尔可夫模型。bcd.hmm, etfA.hmm, etfB.hmm, thl.hmm, bhbd.hmm, cro.hmm, but.hmm, buk.hmm, gctA.hmm, gctB.hmm, hgCoAdA.hmm, hgCoAdB.hmm listed above , hgCoAdC.hmm, gcdA.hmm, gcdB.hmm, 4hbt.hmm, abfD.hmm, abfH.hmm, kamA.hmm, kamD.hmm, kamE.hmm, kdd.hmm, kce.hmm, kal.hmm, atoA .hmm and AtoD.hmm are hidden Markov models of key genes in the short-chain fatty acid synthesis pathway.

在一些实施方案中,所述目标菌株为从皮肤或者人体其他组织来源的微生物。In some embodiments, the target strain is a microorganism derived from skin or other tissues of the human body.

在一些实施方案中,所述目标菌株选自表皮葡萄球菌;进一步地,所述表皮葡萄球菌为表皮葡萄球菌ATCC 12228、表皮葡萄球菌ATCC 14990、表皮葡萄球菌ATCC 35984、表皮葡萄球菌ATCC 700926和/或表皮葡萄球菌ATCC 51625。In some embodiments, the target bacterial strain is selected from Staphylococcus epidermidis; further, the Staphylococcus epidermidis is Staphylococcus epidermidis ATCC 12228, Staphylococcus epidermidis ATCC 14990, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis ATCC 700926 and/or or Staphylococcus epidermidis ATCC 51625.

第二方面,本发明还公开了如上所述的组合物在制备皮肤抗炎制剂方面的应用。进一步地,所述皮肤抗炎制剂为护肤品、药妆制剂、化妆品和/或药品。In the second aspect, the present invention also discloses the application of the above-mentioned composition in the preparation of skin anti-inflammatory preparations. Further, the skin anti-inflammatory preparation is skin care product, cosmeceutical preparation, cosmetic and/or medicine.

第三方面,本发明还公开了一种通过调控特定皮肤微生物实现抗炎效果的方法,向皮肤上的微生物提供发酵培养基用于产生短链脂肪酸实现抗炎效果;所述发酵培养基包含如上所述的组合物。In the third aspect, the present invention also discloses a method for achieving an anti-inflammatory effect by regulating specific skin microorganisms, providing a fermentation medium to the microorganisms on the skin for producing short-chain fatty acids to achieve an anti-inflammatory effect; the fermentation medium contains the above said composition.

在一些实施方案中,所述短链脂肪酸为乙酸、丙酸、丁酸、异丁酸、戊酸、异戊酸和/或己酸。In some embodiments, the short chain fatty acid is acetic acid, propionic acid, butyric acid, isobutyric acid, valeric acid, isovaleric acid, and/or caproic acid.

在一些实施方案中,通过改变所述发酵培养基的组成实现对特定皮肤微生物菌群的调控。In some embodiments, modulation of specific skin microbial flora is achieved by altering the composition of the fermentation medium.

有益效果有:The beneficial effects are:

1)皮肤微生态友好:利用选定的皮肤菌株,发酵原料,原料作为选定菌株的发酵培养基,能很好的为选定菌株提供营养,进而为该菌株在皮肤上的生长,生态的稳定提供了很好的支撑,能有效的帮助皮肤微生态的稳定,对抗条件致病菌的定植,减少皮肤疾病的风险;1) Skin micro-ecological friendliness: Using selected skin strains, fermentation raw materials, and raw materials as the fermentation medium of the selected strains can provide nutrients for the selected strains, and then provide the growth of the strains on the skin, ecologically Stability provides a good support, which can effectively help the stability of skin microecology, resist the colonization of opportunistic pathogens, and reduce the risk of skin diseases;

2)短链脂肪酸功能的长效发挥:相比于直接添加短链脂肪酸的方式,利用原料本身对选定菌株发酵持续产生短链脂肪酸的方式,可以提供一个相对稳定,并且持续低剂量的短链脂肪酸刺激,持久维持短链脂肪酸的皮肤生物学功效,并且可以有效避免直接添加因为浓度过高带来的刺激和气味等问题;2) Long-term exertion of the function of short-chain fatty acids: Compared with the method of directly adding short-chain fatty acids, the method of continuously producing short-chain fatty acids by using the raw material itself to ferment selected strains can provide a relatively stable and continuous low-dose short-chain fatty acid. Chain fatty acid stimulation, long-term maintenance of skin biological effects of short-chain fatty acids, and can effectively avoid problems such as irritation and odor caused by direct addition due to high concentration;

3)基于选定菌株-原料的评估方法及数据库体系,可以非常针对性的对特定菌株进行个性化的原料组合和配方组合,来实现精准的个性化定制方法和效果的开发。选定菌株-原料的评估数据库体系是在本发明基础上的延伸,用于建立皮肤微生物菌株与原料的对应关系,即含有哪些原料的发酵培养基能够有效作用于哪些菌株以生成短链脂肪酸,并将这些对应关系集合成数据库,形成一个体系。3) Based on the evaluation method and database system of selected strains and raw materials, it is possible to carry out personalized raw material combinations and formula combinations for specific strains, so as to realize the development of precise personalized customization methods and effects. The evaluation database system of selected strains-raw materials is an extension based on the present invention, and is used to establish the corresponding relationship between skin microbial strains and raw materials, that is, which strains can be effectively acted on by the fermentation medium containing which raw materials to generate short-chain fatty acids, And these corresponding relationships are collected into a database to form a system.

以下将结合附图对本发明的构思、具体结构及产生的技术效果作进一步说明,以充分地了解本发明的目的、特征和效果。The idea, specific structure and technical effects of the present invention will be further described below in conjunction with the accompanying drawings, so as to fully understand the purpose, features and effects of the present invention.

附图说明Description of drawings

为了更清楚地说明本发明实施例的技术方案,下面将对实施例或现有技术描述中所需要使用的附图作简单地介绍,显而易见地,下面描述中的附图仅仅是本发明的一些实施例,对于本领域普通技术人员来讲,在不付出创造性劳动性的前提下,还可以根据这些附图获得其他的附图。In order to more clearly illustrate the technical solutions of the embodiments of the present invention, the following will briefly introduce the accompanying drawings that need to be used in the description of the embodiments or the prior art. Obviously, the accompanying drawings in the following description are only some of the present invention. Embodiments, for those of ordinary skill in the art, other drawings can also be obtained according to these drawings without paying creative labor.

图1为发酵共培养过程结构示意图。Figure 1 is a schematic diagram of the structure of the fermentation co-cultivation process.

图2为不同浓度的样品C3作用下的角质细胞形态图,其中Solvent Control为未加入C3的溶剂来做的对照组。Fig. 2 is the morphological diagram of keratinocytes under the action of different concentrations of samples C3, wherein Solvent Control is the control group without adding C3 solvent.

图3为不同浓度的样品C3作用下角质细胞的细胞活力曲线图。Fig. 3 is a graph of cell viability of keratinocytes under the action of different concentrations of sample C3.

图4为样品C3的IL-6含量结果柱状图。Fig. 4 is a histogram of IL-6 content results of sample C3.

图5为样品C17和C19的IL-6含量结果柱状图。Fig. 5 is a histogram of IL-6 content results of samples C17 and C19.

图6为样品B1和B10的IL-6含量结果柱状图。Fig. 6 is a histogram of IL-6 content results of samples B1 and B10.

图7为丁酸合成通路及关键基因示意图。Figure 7 is a schematic diagram of butyrate synthesis pathway and key genes.

具体实施方式Detailed ways

为使本发明实施例的目的、技术方案和优点更加清楚,下面将结合本发明实施例中的附图,对本发明实施例中的技术方案进行清楚、完整地描述,显然,所描述的实施例是本发明的一部分实施例,而不是全部的实施例。基于本发明中的实施例,本领域普通技术人员在没有做出创造性劳动的前提下所获得的所有其他实施例,都属于本发明保护的范围。In order to make the purpose, technical solutions and advantages of the embodiments of the present invention clearer, the technical solutions in the embodiments of the present invention will be clearly and completely described below in conjunction with the drawings in the embodiments of the present invention. Obviously, the described embodiments It is a part of embodiments of the present invention, but not all embodiments. Based on the embodiments of the present invention, all other embodiments obtained by persons of ordinary skill in the art without making creative efforts belong to the protection scope of the present invention.

实施例1Example 1

以表皮葡萄球菌ATCC 12228为例进行说明。图1示出了发酵共培养模型或方式方法。将原料配方进行前处理(包括混匀除菌等);将表皮葡萄球菌ATCC 12228(S.epidemidisATCC 12228)进行菌株前处理(包括菌株活化、富集等);然后将经过前处理的原料配方与经过菌株前处理的表皮葡萄球菌ATCC 12228共培养24小时(好氧,37℃,220rpm),对菌液中的代谢产物进行GC-MS(气相质谱)检测短链脂肪酸(SCFAs)。Take Staphylococcus epidermidis ATCC 12228 as an example for illustration. Figure 1 shows a fermentation co-cultivation model or approach. The raw material formula is pre-treated (including mixing and sterilization, etc.); the Staphylococcus epidermidis ATCC 12228 (S.epidemidisATCC 12228) is subjected to strain pre-treatment (including strain activation, enrichment, etc.); and then the pre-treated raw material formula is combined with After strain pretreatment, Staphylococcus epidermidis ATCC 12228 was co-cultured for 24 hours (aerobic, 37°C, 220rpm), and the metabolites in the bacterial liquid were detected by GC-MS (gas chromatography-mass spectrometry) to detect short-chain fatty acids (SCFAs).

原料:raw material:

糖类同分异构体(来自帝斯曼)、重组I型胶原蛋白(来自江苏创建医疗科技有限公司)、重组III型胶原蛋白(来自江苏创建医疗科技有限公司)、重组XVII型胶原蛋白(来自江苏创建医疗科技有限公司)、海藻糖(来自Hayashibara Co.,Ltd.)、甘油(来自印尼春金)、鞘氨醇单胞菌发酵产物提取物(来自路博润)、透明质酸钠(来自华熙生物)、椰油酰谷氨酸TEA盐(来自日本味之素)、神经酰胺(来自深圳迪克曼)。Carbohydrate isomers (from DSM), recombinant type I collagen (from Jiangsu Create Medical Technology Co., Ltd.), recombinant III collagen (from Jiangsu Create Medical Technology Co., Ltd.), recombinant type XVII collagen (from Jiangsu Create Medical Technology Co., Ltd.) From Jiangsu Create Medical Technology Co., Ltd.), Trehalose (from Hayashibara Co., Ltd.), Glycerin (from Indonesia Spring Gold), Sphingomonas Ferment Extract (from Lubrizol), Sodium Hyaluronate (from Bloomage), cocoyl glutamic acid TEA salt (from Ajinomoto), ceramide (from Shenzhen Dickman).

具体的实验步骤:Specific experimental steps:

1、准备发酵培养基1. Prepare the fermentation medium

取50ml离心管,每管加入对应量底物样本(比如表1到表3中刨除菌株外的发酵体系),加入对应量的磷酸盐缓冲液(PBS),混匀后,对于可以高温灭菌的样本,铝箔纸包住121℃高温高压灭菌30-60min,灭菌后暂存于4℃。对于不可高温灭菌的样本,采用0.22μm滤膜进行过滤除菌,除菌后暂存于4℃。Take a 50ml centrifuge tube, add the corresponding amount of substrate sample (such as the fermentation system except the strains in Table 1 to Table 3), add the corresponding amount of phosphate buffer saline (PBS), mix well, and for high temperature sterilization samples, wrapped in aluminum foil, sterilized under high temperature and high pressure at 121°C for 30-60min, and temporarily stored at 4°C after sterilization. For samples that cannot be sterilized by high temperature, use a 0.22 μm filter membrane to filter and sterilize, and store them temporarily at 4°C after sterilization.

2、发酵2. Fermentation

S.epidermidis ATCC 12228在胰酶大豆肉汤(tryptic soy broth,TSB)琼脂平板上培养一夜,温度为37℃。将单个菌落接种在TSB培养基中,在37℃培养约24h。4000rpm离心10分钟(20℃)获得细菌微球,PBS重悬。S. epidermidis ATCC 12228 was cultured overnight on a tryptic soy broth (TSB) agar plate at 37°C. A single colony was inoculated in TSB medium and cultured at 37°C for about 24h. Centrifuge at 4000rpm for 10 minutes (20°C) to obtain bacterial microspheres, and resuspend in PBS.

每管(15ml)发酵体系添加1ml表皮葡萄球菌(浓度约108CFU/mL)。混匀后,在37℃有氧条件下,中孵育(220rpm振荡)24h。含细菌不含发酵培养基的PBS体系作为对照,由于在本实施例中细菌指S.epidermidis ATCC 12228,故简称为表葡+培养基空白,培养基空白指PBS。Add 1ml of Staphylococcus epidermidis (concentration about 10 8 CFU/mL) to each tube (15ml) of the fermentation system. After mixing, incubate at 37° C. under aerobic conditions (220 rpm shaking) for 24 hours. The PBS system containing bacteria and no fermentation medium is used as a control. Since the bacteria in this example refers to S. epidermidis ATCC 12228, it is referred to as epidermidis+medium blank for short, and the medium blank refers to PBS.

3、取样3. Sampling

取出发酵后的50ml离心管,采用一次性注射器吸取2ml,0.22μm滤器过滤至2ml离心管中,冻存至-80℃冰箱待后续用气相质谱法进行短链脂肪酸测定。采用一次性注射器吸取8-10ml,0.22μm滤器过滤至15ml离心管中,冻存至-80℃冰箱待后续评估UVB诱导皮肤角质细胞IL-6表达的抑制效果。剩余样本,0.22μm滤器过滤至15ml离心管中,用pH计进行pH测定,冻存至-80℃冰箱备用。Take out the fermented 50ml centrifuge tube, use a disposable syringe to absorb 2ml, filter it into a 2ml centrifuge tube with a 0.22 μm filter, and store it in a -80°C refrigerator for subsequent determination of short-chain fatty acids by gas chromatography-mass spectrometry. Use a disposable syringe to draw 8-10ml, filter it into a 15ml centrifuge tube with a 0.22μm filter, and store it in a -80°C refrigerator for subsequent evaluation of the inhibitory effect of UVB-induced IL-6 expression in skin keratinocytes. The remaining samples were filtered through a 0.22 μm filter into a 15ml centrifuge tube, measured with a pH meter, and frozen in a -80°C refrigerator for later use.

表1-表3列出了多组发酵实例,这些发酵实例均以表葡+培养基空白为参比发酵体系,比较产短链脂肪酸的能力,尤其是产丁酸的能力。从表1-表3可以看出,当发酵体系中存在1%的糖类同分异构体时,乙酸、丙酸、异丁酸、丁酸、异戊酸、戊酸和己酸的产量均相对参比发酵体系有提升,比如乙酸的产量是参照发酵体系的9.42倍。当发酵体系中存在1%的糖类同分异构体和0.5%的重组XVII型胶原蛋白(即发酵体系C3)时,丁酸的产量是参照发酵体系的7.80倍。Table 1-Table 3 lists multiple groups of fermentation examples. These fermentation examples all use epiglucose+medium blank as a reference fermentation system to compare the ability to produce short-chain fatty acids, especially the ability to produce butyric acid. As can be seen from Table 1-Table 3, when there is 1% sugar isomers in the fermentation system, the output of acetic acid, propionic acid, isobutyric acid, butyric acid, isovaleric acid, valeric acid and hexanoic acid Compared with the reference fermentation system, there is an improvement, for example, the production of acetic acid is 9.42 times that of the reference fermentation system. When there were 1% sugar isomers and 0.5% recombinant type XVII collagen in the fermentation system (ie, fermentation system C3), the production of butyric acid was 7.80 times that of the reference fermentation system.

表1、发酵实例之单一原料Table 1. Single raw material of fermentation example

发酵体系Fermentation system 发酵浓度Fermentation concentration 乙酸Acetic acid 丙酸propionic acid 异丁酸Isobutyric acid 丁酸butyric acid 异戊酸Isovaleric acid 戊酸Valeric acid 己酸caproic acid 表葡+培养基空白Epiglucose+medium blank \\ 11 11 11 11 11 11 11 糖类同分异构体sugar isomers 1.00%1.00% 9.429.42 4.694.69 15.6015.60 2.732.73 5.625.62 1.591.59 1.811.81 重组III型胶原蛋白Recombinant Type III Collagen 0.50%0.50% 2.812.81 4.014.01 51.9951.99 42.5742.57 20.7420.74 2.952.95 2.572.57 重组XVII型胶原蛋白Recombinant Type XVII Collagen 0.50%0.50% 0.090.09 0.440.44 0.890.89 7.257.25 0.240.24 1.001.00 1.251.25

表2、发酵实例之二元/三元复合原料发酵体系与发酵浓度Table 2. Binary/ternary compound raw material fermentation system and fermentation concentration of fermentation examples

Figure BDA0004068152630000061
Figure BDA0004068152630000061

Figure BDA0004068152630000071
Figure BDA0004068152630000071

Figure BDA0004068152630000081
Figure BDA0004068152630000081

表3、表2中的发酵体系对应的短链脂肪酸相对含量The relative content of short-chain fatty acids corresponding to the fermentation system in table 3 and table 2

Figure BDA0004068152630000082
Figure BDA0004068152630000082

Figure BDA0004068152630000091
Figure BDA0004068152630000091

Figure BDA0004068152630000101
Figure BDA0004068152630000101

表1和表2中的发酵浓度是对应发酵体系中的各种原料。比如:表1中的重组III型胶原蛋白一行的发酵浓度指发酵培养基中含有0.5%的重组III型胶原蛋白;表2中的C3发酵体系一行的发酵浓度指发酵培养基中含有1%的糖类同分异构体和0.5%的重组XVII型胶原蛋白。The fermentation concentrations in Table 1 and Table 2 correspond to various raw materials in the fermentation system. For example: the fermentation concentration of the recombinant type III collagen in table 1 refers to the fermentation medium containing 0.5% recombinant type III collagen; the fermentation concentration of the C3 fermentation system in table 2 refers to the fermentation medium containing 1% Sugar isomers and 0.5% recombinant collagen type XVII.

实施例2Example 2

材料:角质细胞来自广东博溪生物科技有限公司,批号Ep220707。KC2500(广东博溪生物)、PBS(索莱宝)、地塞米松(Sigma)、IL-6ELISA试剂盒(Abcam)、MTT(Sigma)、DMSO(Sigma)。Materials: Keratinocytes were from Guangdong Boxi Biotechnology Co., Ltd., batch number Ep220707. KC2500 (Guangdong Boxi Biology), PBS (Solebux), dexamethasone (Sigma), IL-6 ELISA kit (Abcam), MTT (Sigma), DMSO (Sigma).

主要设备:CO2培养箱(Thermo,150I)、超净工作台(苏州安泰,SW-CJ-1F)、酶标仪(BioTek,Epoch)、UVB辐照仪(飞利浦)。Main equipment: CO2 incubator (Thermo, 150I), ultra-clean bench (Suzhou Antai, SW-CJ-1F), microplate reader (BioTek, Epoch), UVB irradiation instrument (Philips).

1、糖类同分异构体+重组XVII胶原蛋白发酵体系(C3)中的发酵液对角质细胞的毒性评估1. Evaluation of the toxicity of the fermentation broth in the sugar isomer + recombinant XVII collagen fermentation system (C3) to keratinocytes

测试方法:Test Methods:

1)细胞接种:角质形成细胞按1×104个/孔的接种密度接种细胞至96孔板,培养箱(37℃、5%CO2)中孵育过夜。1) Cell seeding: keratinocytes were seeded into 96-well plates at a seeding density of 1×10 4 cells/well, and incubated overnight in an incubator (37° C., 5% CO 2 ).

2)试验分组:试验设置调零组、溶剂对照组、阳性对照组与样品组。样品组中,每个样品设置8个浓度梯度,每个浓度梯度下设置3个重复孔。2) Test grouping: The test set up a zero-adjustment group, a solvent control group, a positive control group and a sample group. In the sample group, 8 concentration gradients were set for each sample, and 3 replicate wells were set for each concentration gradient.

3)配液:配制不同浓度的样品工作液:10%、5%、2.5%、1.25%、0.625%。即将C3发酵体系中的发酵液的浓度设为100%,然后分别稀释为上述浓度,得到样品工作液。3) Dosing solution: prepare sample working solutions with different concentrations: 10%, 5%, 2.5%, 1.25%, 0.625%. That is, the concentration of the fermentation broth in the C3 fermentation system was set as 100%, and then diluted to the above concentrations respectively to obtain the sample working solution.

4)给药:待96孔板中角质细胞铺板率达到40%~60%时进行给药。溶剂对照组每孔加入200μL培养液;阳性对照组每孔加入200μL含10%DMSO的培养液;样品组每孔加入200μL含有相应浓度样品工作液的培养液;调零组无细胞接种,仅加入200μL细胞培养液。给药完成后将96孔板放置在培养箱(37℃、5%CO2)中培养24h。4) Administration: administration is performed when the keratinocyte plating rate in the 96-well plate reaches 40%-60%. Add 200 μL of culture solution to each well of the solvent control group; add 200 μL of culture solution containing 10% DMSO to each well of the positive control group; 200 μL cell culture medium. After administration, the 96-well plate was placed in an incubator (37° C., 5% CO 2 ) for 24 hours.

5)检测:细胞孵育培养24h后,弃掉上清,加入MTT工作液(0.5mg/mL),37℃避光孵育4h,孵育结束后,弃掉上清,每孔加150μL DMSO,在490nm处读取OD值。5) Detection: After the cells were incubated for 24 hours, discard the supernatant, add MTT working solution (0.5mg/mL), incubate at 37°C in the dark for 4 hours, after the incubation, discard the supernatant, add 150 μL DMSO to each well, Read the OD value here.

6)细胞相对活力计算:根据公式计算,6) Calculation of relative cell viability: calculated according to the formula,

细胞相对活力(%)=(样品孔OD-调零孔OD)/(溶剂对照孔OD-调零孔OD)×100%。Relative cell viability (%)=(sample well OD-zero adjustment well OD)/(solvent control well OD-zero adjustment well OD)×100%.

结果如图2和图3所示,在不同的添加浓度下,角质细胞形态清晰未见明显变化,细胞活力也没有明显波动,因此得出结论,在上述浓度下,糖类同分异构体+重组XVII胶原蛋白发酵体系中的发酵液对角质细胞未表现出明显的细胞毒性。The results are shown in Figure 2 and Figure 3. At different concentrations, the morphology of keratinocytes was clear and no significant change was observed, and the cell viability did not fluctuate significantly. Therefore, it was concluded that at the above concentrations, the carbohydrate isomers +The fermentation broth in the recombinant XVII collagen fermentation system did not show obvious cytotoxicity to keratinocytes.

2.UVB照射角质细胞IL-6表达抑制实验2. UVB irradiation keratinocyte IL-6 expression inhibition experiment

表4、测试分组Table 4. Test groups

Figure BDA0004068152630000111
Figure BDA0004068152630000111

(一)阳性对照组(地塞米松)工作液配置(1) Positive control group (dexamethasone) working solution configuration

吸取2μL 10%母液溶于2mL培养液中,配制成0.01%地塞米松。Aspirate 2 μL of 10% mother solution and dissolve it in 2 mL of culture solution to prepare 0.01% dexamethasone.

(二)操作步骤(2) Operation steps

1)细胞接种:按2.8×105个/孔的接种密度接种细胞至6孔板,培养箱(37℃、5%CO2)中孵育过夜。1) Cell inoculation: inoculate the cells in a 6-well plate at a seeding density of 2.8×10 5 cells/well, and incubate overnight in an incubator (37° C., 5% CO 2 ).

2)给药:根据表4测试分组,待6孔板中细胞铺板率达到40%~60%时,进行分组给药,每孔加样2mL,每组设3个复孔。给药完成后将6孔板放置在培养箱(37℃、5%CO2)中培养24h。2) Dosing: Test groups according to Table 4. When the cell plating rate in the 6-well plate reaches 40% to 60%, dosing in groups, add 2 mL of sample to each well, and set 3 duplicate wells for each group. After administration, the 6-well plate was placed in an incubator (37° C., 5% CO 2 ) for 24 hours.

3)UVB照射:PBS清洗细胞后,根据测试分组,对有UVB照射的组别进行300mJ/cm2的UVB辐照。3) UVB irradiation: After the cells were washed with PBS, according to the test group, 300mJ/cm 2 of UVB irradiation was performed on the group with UVB irradiation.

4)后孵育:PBS清洗细胞后,将6孔板放置在培养箱(37℃、5%CO2)中后孵育24h。4) Post-incubation: After the cells were washed with PBS, the 6-well plate was placed in an incubator (37° C., 5% CO 2 ) and incubated for 24 hours.

5)收集细胞:孵育培养24h后,收集细胞培养上清液于EP管中,置于-80℃冰箱冷冻保存。5) Cell collection: After 24 hours of incubation, the cell culture supernatant was collected in an EP tube and stored in a -80°C refrigerator.

6)ELISA检测:根据ELISA(酶联免疫)检测试剂盒的操作说明书进行检测分析。6) ELISA detection: detection and analysis were performed according to the operating instructions of the ELISA (enzyme-linked immunosorbent) detection kit.

(三)结果统计分析(3) Statistical analysis of results

应用GraphPad Prism作图(图4-图6),结果表示为Mean±SD。各组间比较采用t-test统计分析。统计分析均为双尾。P<0.05认为具有显著差异,P<0.01认为具有极显著差异。GraphPad Prism was used for graphing (Figure 4-Figure 6), and the results were expressed as Mean±SD. The comparison among groups was analyzed by t-test statistics. Statistical analyzes were two-tailed. P<0.05 was considered to have a significant difference, and P<0.01 was considered to have a very significant difference.

结果显示:The results show that:

1)与BC组相比,NC组的IL-6表达量显著上升,说明本次测试刺激条件有效;1) Compared with the BC group, the expression of IL-6 in the NC group increased significantly, indicating that the stimulation conditions of this test were effective;

2)与NC组相比,PC组的IL-6表达量显著下降,说明本次测试阳性对照有效;2) Compared with the NC group, the expression of IL-6 in the PC group decreased significantly, indicating that the positive control of this test is effective;

3)与NC组相比,样品C3、C17、C19、B-1和B-10(又称为发酵体系C3、C17、C19、B-1和B-10)的IL-6含量均显著下降。3) Compared with the NC group, the IL-6 content of samples C3, C17, C19, B-1 and B-10 (also known as fermentation system C3, C17, C19, B-1 and B-10) all decreased significantly .

通过NC和BC的IL-6含量差异,说明UVB照射的角质细胞能正常分泌IL-6炎症因子,通过PC和NC的IL-6含量差异,说明抗炎药物地塞米松可以有效抑制炎症的发生。C3、C17、C19、B-1和B-10相比于NC而言IL-6含量显著下降,证明C3、C17、C19、B-1和B-10具有抗炎效果。通过数据分析发现这5个样品产丁酸的相对浓度都在1.2~7.9之间,在这个范围内的所有样品也都具有较好的抑制IL-6的作用,其含有的碳源和氮源形成的组合物可作为本发明所述的通过调控特定皮肤微生物实现抗炎效果的组合物。The difference in IL-6 content between NC and BC shows that the keratinocytes irradiated by UVB can normally secrete IL-6 inflammatory factor, and the difference in IL-6 content between PC and NC shows that the anti-inflammatory drug dexamethasone can effectively inhibit the occurrence of inflammation . The content of IL-6 in C3, C17, C19, B-1 and B-10 was significantly decreased compared with NC, which proved that C3, C17, C19, B-1 and B-10 had anti-inflammatory effects. Through data analysis, it was found that the relative concentrations of butyric acid produced by these five samples were all between 1.2 and 7.9, and all samples within this range also had a good inhibitory effect on IL-6, and the carbon and nitrogen sources contained in them were The formed composition can be used as the composition for achieving anti-inflammatory effects by regulating specific skin microorganisms according to the present invention.

从实施例1和2可以证明,利用GC-MS快速鉴定发酵液中的短链脂肪酸含量,并用IL-6抑制实验评估发酵液的抗炎舒缓效果,从而快速的筛选和评价原料通过特定菌株实现抗炎的功效。From Examples 1 and 2, it can be proved that GC-MS is used to quickly identify the content of short-chain fatty acids in the fermentation broth, and the IL-6 inhibition test is used to evaluate the anti-inflammatory and soothing effects of the fermentation broth, so that the rapid screening and evaluation of raw materials can be achieved through specific strains Anti-inflammatory effect.

实施例3、快速筛选具有皮肤抗炎效果的原料的评价方法Embodiment 3, rapid screening has the evaluation method of the raw material of skin anti-inflammation effect

该方法包括以下步骤:The method includes the following steps:

S1、通过NGS测序或者公共数据库检索获得目标菌株基因组草图数据;S1. Obtain the draft genome data of the target strain through NGS sequencing or public database retrieval;

S2、将所述目标菌株基因组草图数据经prokka软件预测基因;S2, using prokka software to predict genes from the draft genome data of the target strain;

S3、通过收集短链脂肪酸合成通路上关键基因的核酸序列,利用clustalo软件做多序列比对,输出序列比对的STOCKHOLM格式,再利用hmmer软件构建短链脂肪酸合成通路上关键基因的隐马尔可夫模型;每个关键基因对应一个隐马尔可夫模型,故短链脂肪酸合成通路上存在n个关键基因则对应n个所述短链脂肪酸合成通路上关键基因的隐马尔可夫模型,n>0;利用所述短链脂肪酸合成通路上关键基因的隐马尔可夫模型判定所述步骤S2预测的每个基因是否为短链脂肪酸合成通路上的关键基因:若所述目标菌株具有短链脂肪酸合成通路上的关键基因,则所述目标菌株产短链脂肪酸的可能性大;反之则小;根据所述目标菌株具备的短链脂肪酸合成通路上的关键基因种类确定所述目标菌株产短链脂肪酸的合成通路,从而划定原料的选择范围以及构建目标菌株库;S3. By collecting the nucleic acid sequences of key genes in the short-chain fatty acid synthesis pathway, use the clustalo software to perform multiple sequence alignments, output the sequence alignment in STOCKHOLM format, and then use the hmmer software to construct the hidden mark of the key genes in the short-chain fatty acid synthesis pathway Each key gene corresponds to a Hidden Markov Model, so there are n key genes in the short-chain fatty acid synthesis pathway corresponding to n Hidden Markov models of key genes in the short-chain fatty acid synthesis pathway, n> 0; use the hidden Markov model of key genes on the short-chain fatty acid synthesis pathway to determine whether each gene predicted in step S2 is a key gene on the short-chain fatty acid synthesis pathway: if the target strain has short-chain fatty acids If the key gene on the synthetic pathway is selected, the possibility of the target bacterial strain producing short-chain fatty acids is large; Fatty acid synthesis pathway, so as to delineate the selection range of raw materials and construct the target strain library;

S4、将从所述目标菌株库中选定的目标菌株和划定范围内的待筛选原料按照设定的比率和条件进行发酵共培养,得到发酵共培养液;S4. Ferment and co-culture the target strains selected from the target strain library and the raw materials to be screened within the defined range according to the set ratio and conditions to obtain a fermentation co-culture solution;

S5、采用靶向的GC-MS分析测定方法,测定所述发酵共培养液中的短链脂肪酸含量;S5. Determining the content of short-chain fatty acids in the fermentation co-culture solution by using a targeted GC-MS analysis and determination method;

S6、用于利于UVB照射角质细胞,触发所述角质细胞的IL-6表达,再加入所述发酵共培养液检测IL-6表达下降情况得到所述发酵共培养液的IL-6抑制效果,实现评估所述待筛选原料的皮肤抗炎效果的目的;评估标准为IL-6抑制效果越好则所述待筛选原料的皮肤抗炎效果越好。S6. It is used to irradiate keratinocytes with UVB to trigger the expression of IL-6 in the keratinocytes, and then add the fermentation co-culture solution to detect the decrease of IL-6 expression to obtain the IL-6 inhibitory effect of the fermentation co-culture solution, The purpose of evaluating the skin anti-inflammatory effect of the raw material to be screened is realized; the evaluation standard is that the better the IL-6 inhibitory effect is, the better the skin anti-inflammatory effect of the raw material to be screened is.

其中,所述短链脂肪酸为丁酸。丁酸的合成通路包括4条,分别为第一通路、第二通路、第三通路和第四通路(见图7),且这4条合成通路涉及3个共有基因;所述3个共有基因分别对应的关键基因的隐马尔可夫模型为bcd.hmm、etfA.hmm、etfB.hmm;所述第一通路对应的关键基因的隐马尔可夫模型有thl.hmm、bhbd.hmm、cro.hmm、but.hmm、buk.hmm;所述第二通路对应的关键基因的隐马尔可夫模型有gctA.hmm、gctB.hmm、hgCoAdA.hmm、hgCoAdB.hmm、hgCoAdC.hmm、gcdA.hmm、gcdB.hmm;所述第三通路对应的关键基因的隐马尔可夫模型有4hbt.hmm、abfD.hmm、abfH.hmm;所述第三通路对应的关键基因的隐马尔可夫模型有kamA.hmm、kamD.hmm、kamE.hmm、kdd.hmm、kce.hmm、kal.hmm、atoA.hmm、AtoD.hmm;Wherein, the short-chain fatty acid is butyric acid. The synthetic pathway of butyrate includes 4, respectively the first pathway, the second pathway, the third pathway and the fourth pathway (see Figure 7), and these 4 synthetic pathways involve 3 common genes; the 3 common genes The hidden Markov models of the corresponding key genes are bcd.hmm, etfA.hmm, etfB.hmm; the hidden Markov models of the key genes corresponding to the first pathway are thl.hmm, bhbd.hmm, cro. hmm, but.hmm, buk.hmm; the hidden Markov models of key genes corresponding to the second pathway include gctA.hmm, gctB.hmm, hgCoAdA.hmm, hgCoAdB.hmm, hgCoAdC.hmm, gcdA.hmm, gcdB.hmm; the hidden Markov model of the key gene corresponding to the third pathway has 4hbt.hmm, abfD.hmm, abfH.hmm; the hidden Markov model of the key gene corresponding to the third pathway has kamA. hmm, kamD.hmm, kamE.hmm, kdd.hmm, kce.hmm, kal.hmm, atoA.hmm, AtoD.hmm;

上述所列bcd.hmm、etfA.hmm、etfB.hmm、thl.hmm、bhbd.hmm、cro.hmm、but.hmm、buk.hmm、gctA.hmm、gctB.hmm、hgCoAdA.hmm、hgCoAdB.hmm、hgCoAdC.hmm、gcdA.hmm、gcdB.hmm、4hbt.hmm、abfD.hmm、abfH.hmm、kamA.hmm、kamD.hmm、kamE.hmm、kdd.hmm、kce.hmm、kal.hmm、atoA.hmm、AtoD.hmm均为所述短链脂肪酸合成通路上关键基因的隐马尔可夫模型。bcd.hmm, etfA.hmm, etfB.hmm, thl.hmm, bhbd.hmm, cro.hmm, but.hmm, buk.hmm, gctA.hmm, gctB.hmm, hgCoAdA.hmm, hgCoAdB.hmm listed above , hgCoAdC.hmm, gcdA.hmm, gcdB.hmm, 4hbt.hmm, abfD.hmm, abfH.hmm, kamA.hmm, kamD.hmm, kamE.hmm, kdd.hmm, kce.hmm, kal.hmm, atoA .hmm and AtoD.hmm are hidden Markov models of key genes in the short-chain fatty acid synthesis pathway.

采用如上所述方法,对表皮葡萄球菌的不同菌株(ATCC编号不同)进行丁酸合成通路关键基因识别,结果如表5所示。从表5可以看出,这5株表皮葡萄球菌的产丁酸合成通路主要集中在第一通路(橙色通路)和第四通路(灰色通路)上。Using the method described above, different strains of Staphylococcus epidermidis (different ATCC codes) were identified for the key genes of the butyrate synthesis pathway, and the results are shown in Table 5. It can be seen from Table 5 that the butyrate synthesis pathways of these five strains of Staphylococcus epidermidis mainly focus on the first pathway (orange pathway) and the fourth pathway (gray pathway).

表5、表皮葡萄球菌选定菌株的丁酸合成通路关键基因判断结果Table 5. Judgment results of key genes in the butyrate synthesis pathway of selected strains of Staphylococcus epidermidis

选定菌株Selected strains 共有基因shared gene 第一通路first access 第二通路Second access 第三通路third pathway 第四通路fourth pathway ATCC 12228ATCC 12228 ++ ++ -- -- ++ ATCC 14990ATCC 14990 ++ ++ -- -- ++ ATCC 35984ATCC 35984 ++ ++ -- -- ++ ATCC 700926ATCC 700926 ++ ++ -- -- ++ ATCC 51625ATCC 51625 ++ ++ -- -- ++

注:+表示有,-表示无。Note: + means yes, - means no.

所述目标菌株选自表皮葡萄球菌;进一步地,所述表皮葡萄球菌为表皮葡萄球菌ATCC 12228、表皮葡萄球菌ATCC 14990、表皮葡萄球菌ATCC 35984、表皮葡萄球菌ATCC700926和/或表皮葡萄球菌ATCC 51625。以表皮葡萄球菌ATCC 12228得到的实验数据如实施例1和2所示。The target strain is selected from Staphylococcus epidermidis; further, the Staphylococcus epidermidis is Staphylococcus epidermidis ATCC 12228, Staphylococcus epidermidis ATCC 14990, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis ATCC700926 and/or Staphylococcus epidermidis ATCC 51625. The experimental data obtained with Staphylococcus epidermidis ATCC 12228 are shown in Examples 1 and 2.

以上内容仅为本申请的具体实施方式,本申请的保护范围并不局限于此。本领域技术人员在本申请所公开的技术范围内可以进行变化或替换,这些变化或替换都应当在本申请的保护范围之内。The above content is only a specific implementation manner of the present application, and the protection scope of the present application is not limited thereto. Those skilled in the art may make changes or substitutions within the technical scope disclosed in this application, and these changes or substitutions shall all be within the protection scope of this application.

Claims (9)

1. A composition for achieving an anti-inflammatory effect by modulating specific skin microorganisms, comprising a carbon source and a nitrogen source; the carbon source is selected from one or more of saccharide isomer, sphingomonas fermentation product extract, glycerol, sodium hyaluronate and trehalose; the nitrogen source is one or more selected from recombinant type I collagen, recombinant type III collagen, recombinant type XVII collagen, arginine, cocoyl glutamic acid TEA salt and ceramide.
2. The composition of claim 1, wherein the carbon source is a carbohydrate; the nitrogen source is a protein.
3. The composition of claim 2, wherein the carbohydrate is a carbohydrate of human origin; the protein is a protein of human origin.
4. The composition according to claim 1, wherein the composition is used as a constituent of a fermentation medium for microbial fermentation such that the butyric acid content produced by the microorganism is 1.2 to 7.9 times the butyric acid content produced under the same conditions without adding the composition.
5. The composition of claim 1, wherein the butyric acid is produced by a microorganism as a constituent of a fermentation medium; the concentration of the carbon source in the fermentation medium is 0.1% -3%; the concentration of the nitrogen source in the fermentation medium is 0.1% -3%.
6. The composition according to claim 4, wherein the composition is a raw material having a skin anti-inflammatory effect obtained by screening by an evaluation method for rapidly screening raw materials having a skin anti-inflammatory effect;
the evaluation method for rapidly screening the raw materials with the skin anti-inflammatory effect comprises the following steps:
s1, obtaining target strain genome sketch data through NGS sequencing or public database retrieval;
s2, predicting genes from genome sketch data of the target strain through gene prediction software;
s3, collecting nucleic acid sequences of key genes on a short chain fatty acid synthesis path, performing multi-sequence comparison by using multi-sequence comparison software, outputting STOCKHOLM format of sequence comparison, and constructing a hidden Markov model of the key genes on the short chain fatty acid synthesis path by using hmmer software; each key gene corresponds to a hidden Markov model, so that the existence of n key genes on a short-chain fatty acid synthesis path corresponds to the hidden Markov models of the key genes on n short-chain fatty acid synthesis paths, and n is more than 0; determining whether each gene predicted in the step S2 is a key gene on the short-chain fatty acid synthesis pathway by using a hidden Markov model of the key gene on the short-chain fatty acid synthesis pathway: if the target strain has a key gene on a short chain fatty acid synthesis pathway, the target strain has high possibility of producing short chain fatty acids; otherwise, the small is; determining a short-chain fatty acid synthesis path of the target strain according to the key gene types on the short-chain fatty acid synthesis path of the target strain, thereby defining a selection range of raw materials and constructing a target strain library;
s4, fermenting and co-culturing the target strain selected from the target strain library and the raw materials to be screened in a defined range according to a set ratio and conditions to obtain a fermentation co-culture solution;
s5, determining the content of short-chain fatty acid in the fermentation co-culture solution by adopting a targeted GC-MS analysis and determination method;
s6, the method is used for facilitating UVB irradiation on the keratinocytes, triggering IL-6 expression of the keratinocytes, and then adding the fermentation co-culture solution to detect the IL-6 expression reduction condition to obtain the IL-6 inhibition effect of the fermentation co-culture solution, so that the purpose of evaluating the skin anti-inflammatory effect of the raw materials to be screened is achieved; the evaluation criterion is that the better the IL-6 inhibition effect is, the better the skin anti-inflammatory effect of the raw materials to be screened is.
7. Use of a composition according to any one of claims 1 to 6 for the preparation of a skin anti-inflammatory formulation.
8. A method for achieving an anti-inflammatory effect by modulating specific skin microorganisms, characterized by providing the microorganisms on the skin with a fermentation medium for producing short chain fatty acids to achieve the anti-inflammatory effect; the fermentation medium comprising the composition of any one of claims 1-6.
9. The method of achieving an anti-inflammatory effect by modulating a specific skin microorganism according to claim 8, wherein the short chain fatty acid is acetic acid, propionic acid, butyric acid, isobutyric acid, valeric acid, isovaleric acid and/or caproic acid; the regulation and control of the specific skin microbial flora is realized by changing the composition of the fermentation medium.
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