Detailed Description
Various exemplary embodiments of the invention will now be described in detail, which should not be considered as limiting the invention, but rather as more detailed descriptions of certain aspects, features and embodiments of the invention.
It is to be understood that the terminology used herein is for the purpose of describing particular embodiments only and is not intended to be limiting of the invention. In addition, for numerical ranges in this disclosure, it is understood that each intermediate value between the upper and lower limits of the ranges is also specifically disclosed. Every smaller range between any stated value or stated range, and any other stated value or intermediate value within the stated range, is also encompassed within the invention. The upper and lower limits of these smaller ranges may independently be included or excluded in the range.
Unless otherwise defined, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs. Although only preferred methods and materials are described herein, any methods and materials similar or equivalent to those described herein can be used in the practice or testing of the present invention. All documents mentioned in this specification are incorporated by reference for the purpose of disclosing and describing the methods and/or materials associated with the documents. In case of conflict with any incorporated document, the present specification will control.
It will be apparent to those skilled in the art that various modifications and variations can be made in the specific embodiments of the invention described herein without departing from the scope or spirit of the invention. Other embodiments will be apparent to those skilled in the art from consideration of the specification of the present invention. The specification and examples of the present invention are exemplary only.
As used herein, the terms "comprising," "including," "having," "containing," and the like are intended to be inclusive and mean an inclusion, but not limited to.
The invention performs screening comparison on genes involved in classical establishment of a DNA methylation pathway RdDM pathway in early transcriptome data, discovers that RdDM pathway genes are obviously up-regulated with the lapse of time after the Chinese cabbage is inoculated with the plasmodiophora, judges that the increase of DNA methylation degree possibly accompanies the inoculation of the Chinese cabbage, speculates that the resistance to the plasmodiophora can be improved after exogenously applied methyltransferase inhibitor 5-AzaC inhibits the increase of genome methylation of the Chinese cabbage, and particularly carries out the following research.
Example 1 verification of the Effect of 5-AzaC on plant Normal growth
1. Accelerating germination
Placing two pieces of filter paper in a culture dish, pouring a proper amount of distilled water, uniformly spreading Chinese cabbage seeds Beijing No. 3 (national ly-examined vegetable 2001007, national institute of agriculture and forestry sciences, beijing) and rape seeds Westar (cabbage type rape, national oil crop middle-stage warehouse, national institute of agricultural sciences, oil crop institute, etc.) on the filter paper, and accelerating germination in a dark warm environment for 2 days.
2. Sowing seeds
The sprouted sprouts are sowed in a 72-hole tray and managed according to the normal water and fertilizer conditions.
3. Exogenous application 5-AzaC
The initial 0d of 5-Azac is used after 20d sowing, and 5-AzaC of clear water, 50 mu M, 100 mu M, 150 mu M and 200 mu M concentration are respectively used at 0d, 7d and 14d by injection.
4. Physiological index measurement
To determine whether 5-AzaC exogenous application would affect normal plant growth, three groups of four treatments were each assayed for plant height, crown width, leaf length, leaf width-related physiological index 0d, 8d, 23d, 37d post application, three biological replicates were performed for each treatment. The plant height and the crown width are the height of the overground part and the plant unfolding width when the plant presents natural morphology. The leaf length and the leaf width are measured by selecting the outermost leaf of the plant, the leaf length refers to the length from the bottom of the leaf stalk to the highest point of the leaf margin, and the leaf width refers to the length of the widest position of the outer leaf.
5. Conclusion of the experiment
The results are shown in fig. 1 and 2, the effect of the applied concentration of 5-AzaC on the cabbage plants shows the S-shaped effect on plant height, leaf shape and the like, the plants with the applied concentrations of 50 mu M, 150 mu M and 200 mu M show dwarfing of the plants, the concentration of 100 mu M has no obvious effect, and the statistical difference is shown on the measured data. Thus, the present invention selects 5-AzaC at a concentration of 100. Mu.M for use in verifying its effect on plant clubroot.
Example 2 verification of the Effect of 5-AzaC on plant clubroot
1. Accelerating germination
Placing two pieces of filter paper in a culture dish, pouring a proper amount of distilled water, uniformly spreading the Chinese cabbage seeds Beijing Xin No. 3 and the rape seeds Westar on the filter paper, and accelerating germination in a dark and warm environment for 2 days.
2. Sowing seeds
The sprouted sprouts are sowed in a 72-hole tray and managed according to the normal water and fertilizer conditions. After 20d, the rhizomatous bacteria are inoculated.
3. Inoculating bacteria
(1) The preparation method of the plasmodiophora radicle bacterial liquid comprises weighing plasmodiophora radicle (the mycorrhiza is collected from Liaoning citizens) from a refrigerator at-40 ℃, identifying as physiological micro-species Pb4 of the plasmodiophora brassicae by an SCD identification system, filling the plasmodiophora radicle into a self-sealing bag, placing the self-sealing bag under normal temperature, then placing the mycorrhiza into a juicer which is soaked and sterilized in a potassium permanganate solution for 30min in advance, and adding distilled water for grinding. Placing the sheared clean 8 layers of gauze on the mouth of a sterilized wide-mouth bottle, pouring the bacterial liquid into the bottle for filtration, and collecting the bacterial liquid in a clean container for standby after uniform mixing.
(2) The concentration detection of the plasmodiophora comprises the steps of taking 10 mu L of bacterial liquid in a centrifuge tube, adding 2 mu L of aniline blue and 780 mu L of sterilized water, uniformly mixing, and standing for 2 minutes. Sterilizing the blood cell counting plate with 75% alcohol, wiping with a piece of mirror wiping paper, sucking 1 μl of mixed liquid drop on the blood cell counting plate, covering with a cover glass, counting the number of spores under an optical microscope, diluting to 1× 7/mL, and inoculating.
(3) Inoculating the rhizomatous bacteria liquid, namely inoculating the rhizomatous bacteria by adopting an injection method after 20d sowing, sucking the uniformly shaken bacteria liquid by using a10 mL syringe, and injecting 2mL of the rhizomatous bacteria liquid near the root of each seedling. 2mL of clean water was injected as a control group (CK).
4. Exogenous application 5-AzaC
100 Mu M5-AzaC is administered by injection at intervals of six hours after inoculation of the rhizomes for avoiding dilution of the rhizomes at 0d after inoculation of the rhizomes for 5-AzaC.
5. Statistics of morbidity and index of disease
Disease resistance investigation and statistics of plants are carried out at 0d, 8d, 23d and 37d after inoculation.
Incidence (%) = number of plants to be transplanted/total number of plants×100%;
Disease index = [ Σ (number of disease plants at each stage×value of disease grade)/(total number of investigation×highest value) ]×100%;
Grading the disease severity, namely, normal growth of the plant, no visible root nodule at the main root and no disease at the lateral root, namely, the root is not diseased, namely, 0 grade, the lateral root has nodules, namely, 1 grade, the lateral root has large nodules or the main root grows to generate nodules, namely, 2 grade, the normal growth of the plant is affected, and the main root has obvious large nodules, namely, 3 grade.
6. Identification of content level of root of Chinese cabbage 'Beijing Xin No. 3' relative to clubroot
(1) CTAB method for extracting plant root DNA
15 Plants are randomly selected at different time points (0, 8, 23 and 37 d), each group of plants with relatively close growth conditions are gently taken out from a 72-hole tray, the roots are carefully cleaned by clean water, and impurities such as peat, perlite and the like are not attached to root hairs. Collecting the cleaned root sample for later use.
The cleaned root tissue is put into a mortar to be ground into powder, then is transferred into a 2mL centrifuge tube, 600 mu L of CTAB buffer solution preheated in a constant temperature water bath kettle at a temperature of 65 ℃ is added, and the mixture is gently inverted and mixed uniformly. Then the centrifuge tube is inserted into the buoy and is mixed up and down for a plurality of times at intervals of 10 minutes in a water bath at 65 ℃ for 45-60 minutes. After the water bath 600. Mu.L of the extract (isoamyl alcohol: chloroform=1:24) was added to the fume hood, and after shaking up and down, immediately 12000rpm,4℃and centrifugation was carried out for 15min. mu.L of the upper aqueous phase was pipetted into a new 1.5mL centrifuge tube, 900. Mu.L of absolute ethanol was added and the mixture was allowed to stand at-20℃for 40min. After removal, the mixture was centrifuged at 12000rpm at 4℃for 10min, the supernatant was discarded, and 600. Mu.L of 70% ethanol was added. Centrifuge at 12000rpm,4 ℃ for 3min, discard supernatant and remove residual ethanol as much as possible, air dry in a fume hood. After air drying, 100-200 mu L of sterilized water is added, vortex oscillation is carried out, DNA is fully mixed, and standing and dissolution are carried out for 30min at normal temperature. Then, agarose gel electrophoresis is used for detecting the DNA quality, and an enzyme-labeled instrument is used for measuring the purity and the concentration of the DNA. The DNA solution was stored in a-20℃refrigerator for use.
(2) Real-time fluorescent quantitative PCR detection of DNA content of plasmodiophora
The real-time fluorescence quantification method is adopted, and the DNA content of the rhizomatous bacteria is calibrated by utilizing the expression quantity of Pb genes. The primers used were Pb-F5'-AAACAACGAGTCAGCTTGAATGC-3' and Pb-R5'-AGGACTTGGCTGCGGAT CAC-3'.
The PCR reaction system comprises:
TABLE 1
PCR procedure:
TABLE 2
7. Conclusion of the experiment
Exogenous administration of 5-AzaC delays the course of the clubroot disease.
In disease resistance investigation statistics, susceptible varieties Beijing No. 3 and Westar are serious in disease, the incidence rate almost reaches 100%, the incidence rate of 5-AzaC is about 60%, and the disease index is also obviously reduced. And the treatment group 5-AzaC had significantly delayed the course of the late clubroot compared to the Pb4 group (fig. 3, 4,5 and 6).
The above embodiments are only illustrative of the preferred embodiments of the present invention and are not intended to limit the scope of the present invention, and various modifications and improvements made by those skilled in the art to the technical solutions of the present invention should fall within the protection scope defined by the claims of the present invention without departing from the design spirit of the present invention.