CN116103157A - A screening method for trichoderma strains degrading bagasse cellulose - Google Patents
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Abstract
Description
技术领域technical field
本发明属于微生物技术领域,具体涉及一种降解甘蔗渣纤维素的木霉菌株的筛选方法。The invention belongs to the technical field of microbes, and in particular relates to a screening method for Trichoderma strains that degrade bagasse cellulose.
背景技术Background technique
甘蔗渣是甘蔗制糖工业过程中的主要副产品,是由甘蔗经过机械破碎、多辊压榨以及进行固-液(蔗汁)分离后留下的甘蔗茎固体纤维残渣,是一种可再生的、丰富的资源,适合生产生物燃料和化学品等生物基产品,是传统石油基燃料的理想替代品,也是生物炼制概念的支柱。甘蔗渣资源除了极少部分用于生物炼制和制浆造纸外,主要被用作于甘蔗制糖厂和生物乙醇厂中燃烧以产生热量和电力,使用附加值低且易造成二次污染。因此,有必要选择生态的方法来处理它。获得到高产纤维素酶并且能够稳定遗传的突变菌株,用于降解甘蔗渣生物质,从而提高甘蔗渣纤维素的转化率,使甘蔗渣达到高值化、资源化利用。Bagasse is the main by-product of the sugar cane sugar industry process. It is the solid fiber residue of sugarcane stems left after sugarcane is mechanically crushed, multi-roll pressed and solid-liquid (cane juice) separated. It is a renewable, An abundant resource suitable for the production of bio-based products such as biofuels and chemicals, an ideal alternative to traditional petroleum-based fuels and the backbone of the biorefinery concept. Except for a very small part of bagasse resources used for biorefining and pulping and papermaking, they are mainly used for burning in sugarcane sugar factories and bioethanol factories to generate heat and electricity. The added value of use is low and it is easy to cause secondary pollution. Therefore, it is necessary to choose an ecological approach to deal with it. A mutant strain with high cellulase production and stable inheritance is obtained, which is used to degrade bagasse biomass, thereby improving the conversion rate of bagasse cellulose, and making bagasse achieve high value and resource utilization.
纤维素生物质的高值化、资源化利用已经成为研究热点,而甘蔗渣纤维素材料既节能又环保,在降解纤维素生物质的多种方法中,生物法较行之有效,纤维素的降解和转化利用的是微生物的次级代谢产物纤维素酶,但是在工业生产上并没有得到广泛的应用,主要原因就是在实际应用方面存在菌株产酶能力弱且质量不稳定,纤维素转化率低、酶成本及生产成本高等问题,因此迫切需要寻找具有高效纤维素酶生产潜力的真菌。几十年来,研究者们对各种真菌培养物进行了酶的筛选,但大多数真菌培养物尚未被发现。筛选出产酶能力强且酶活性高的野生菌株可以为企业带来较高的商业利润,而且对甘蔗渣纤维素资源的有效利用具有重要意义。The high-value and resource utilization of cellulosic biomass has become a research hotspot, and the bagasse cellulosic material is energy-saving and environmentally friendly. Among the various methods for degrading cellulosic biomass, biological methods are more effective. Degradation and transformation utilize cellulase, a secondary metabolite of microorganisms, but it has not been widely used in industrial production. The main reason is that in practical applications, there are strains with weak enzyme production ability and unstable quality. Therefore, it is urgent to find fungi with high-efficiency cellulase production potential. For decades, researchers have screened various fungal cultures for the enzyme, but most fungal cultures have yet to be discovered. Screening wild strains with strong enzyme production ability and high enzyme activity can bring higher commercial profits to enterprises, and is of great significance to the effective utilization of bagasse cellulose resources.
然而,目前仍存在甘蔗渣资源化利用率低以及降解纤维素困难、成本高等问题,主要是酶成本高,产糖效率不高等。为进一步扩大甘蔗渣的利用,获得高效降解甘蔗渣纤维的产酶菌株是一条可行的途径。However, there are still problems such as low resource utilization rate of bagasse, difficulty in degrading cellulose, and high cost, mainly due to high enzyme cost and low sugar production efficiency. In order to further expand the utilization of bagasse, it is a feasible way to obtain enzyme-producing strains that can efficiently degrade bagasse fibers.
发明内容Contents of the invention
本发明需要解决的技术问题是提供一株纤维素酶产生菌木霉属A-8,能够有效地降解甘蔗渣纤维素,释放出寡糖或者单糖,且产酶能力高,酶成本低。The technical problem to be solved in the present invention is to provide a strain of cellulase-producing fungus Trichoderma A-8, which can effectively degrade bagasse cellulose, release oligosaccharides or monosaccharides, and has high enzyme production capacity and low enzyme cost.
为实现上述目的,本发明采用了以下的技术手段:一株纤维素酶产生菌木霉属A-8,保藏于中国普通微生物菌种保藏管理中心CGMCC No.20746,地址为:北京市朝阳区北辰西路1号院3号,保藏时间为2020年10月26日。In order to achieve the above object, the present invention adopts the following technical means: a strain of cellulase producing bacteria Trichoderma A-8, preserved in China General Microorganism Culture Collection Management Center CGMCC No.20746, the address is: Chaoyang District, Beijing No. 3, No. 1 Courtyard, Beichen West Road, the preservation time is October 26, 2020.
一株纤维素酶产生菌木霉属A-8的筛选方法,包括以下步骤:A screening method for cellulase producing bacteria Trichoderma A-8, comprising the following steps:
(1)取霉变甘蔗渣样品置于样品瓶中,在培养基中静态培养;(1) Get the moldy bagasse sample and place it in the sample bottle, and culture it statically in the culture medium;
(2)获得的菌液进行梯度稀释,于CMC-Na固体平板中进行涂布,置于恒温培养箱中培养后,再进行斜面划线培养,根据菌落形态、颜色分别分离纯化单菌落;(2) Gradient dilution of the obtained bacterial solution was carried out, coated on a CMC-Na solid plate, placed in a constant temperature incubator for cultivation, and then cultured by streaking on a slant plane, and a single colony was separated and purified according to the colony shape and color;
(3)将分离得到的纯化菌株用打孔器取接入刚果红培养基中培养,分离出具有较大透明圈的菌株;(3) The purified bacterial strain obtained by separation is taken and inserted into the Congo red culture medium with a puncher to cultivate, and the bacterial strain with a larger transparent circle is isolated;
(4)将步骤(3)分离出的菌株中筛选滤纸失重率高且酶活性高的菌株,然后将筛选出的菌株置于恒温振荡培养箱中培养后,接入PDA培养基进行再纯化后获得。(4) Screen strains with high filter paper weight loss rate and high enzyme activity from the strains isolated in step (3), then place the screened strains in a constant temperature shaking incubator for cultivation, and then insert PDA medium for repurification get.
所述静态培养的培养基是以CMC-Na为碳源的液体富集培养基。The culture medium of the static culture is a liquid enrichment medium with CMC-Na as a carbon source.
所述恒温培养箱中培养是在30℃培养5d。The cultivation in the constant temperature incubator was carried out at 30° C. for 5 days.
所述的刚果红培养基为按以下配比配制:(NH4)2SO4 2.0g,MgSO4·7H2O 0.5g,K2HPO4 1.0g,NaCl 0.5g,微晶纤维素2.0g,刚果红0.4g,琼脂20g,加超纯水至1000mL;配制后121℃湿热灭菌30min。The Congo red medium is prepared according to the following ratio: (NH 4 ) 2 SO 4 2.0g, MgSO 4 ·7H 2 O 0.5g, K 2 HPO 4 1.0g, NaCl 0.5g, microcrystalline cellulose 2.0g , Congo red 0.4g, agar 20g, add ultrapure water to 1000mL; after preparation, sterilize at 121°C for 30min.
所述的恒温震荡培养箱培养的条件为30℃,200r/min。The conditions for culturing in the constant temperature shaking incubator are 30° C., 200 r/min.
所述的PDA培养基为称取去皮土豆200g,葡萄糖20g,琼脂20g,pH 自然,土豆切成小方块,放入水中煮沸大约30min,然后用四层纱布过滤,在滤液中加入葡萄糖和琼脂粉,加热,用玻璃棒搅拌至葡萄糖和琼脂粉全部溶解,最后加入超纯水至1000mL,121℃湿热灭菌30min。The PDA medium is to weigh 200g of peeled potatoes, 20g of glucose, 20g of agar, and the pH is natural. The potatoes are cut into small cubes, boiled in water for about 30min, then filtered with four layers of gauze, and glucose and agar are added to the filtrate. powder, heat, stir with a glass rod until the glucose and agar powder are completely dissolved, and finally add ultrapure water to 1000mL, and sterilize at 121°C for 30min.
本发明的有益效果是:The beneficial effects of the present invention are:
提供了一株纤维素酶产生菌木霉属A-8,并提供了该菌株的筛选方法,该菌株能够有效地降解甘蔗渣纤维素,释放出寡糖或者单糖,且产酶能力高,酶成本低。Provides a cellulase-producing strain Trichoderma A-8, and provides a screening method for the strain, the strain can effectively degrade bagasse cellulose, release oligosaccharides or monosaccharides, and have high enzyme-producing ability, Enzymes are low cost.
附图说明Description of drawings
图1为实施例4中基于ITS序列的系统发育树。FIG. 1 is a phylogenetic tree based on ITS sequences in Example 4.
具体实施方式Detailed ways
下面结合附图及实施例对本发明进行说明。The present invention will be described below in conjunction with the accompanying drawings and embodiments.
实施例1:Example 1:
本实施例是本发明所述的一株纤维素酶产生菌木霉属A-8的筛选方法的一个实施例,包括如下步骤:This embodiment is an embodiment of the screening method of a cellulase-producing fungus Trichoderma A-8 according to the present invention, comprising the following steps:
(1)取霉变甘蔗渣样品置于样品瓶中,在培养基中静态培养:以CMC-Na 为碳源,采用液体富集培养基,获得纤维素分解菌。置于涡旋振荡器上最大频率振荡5min,将样品上的微生物洗脱下来,移液枪取出2mL菌液,接种在新鲜的100mL CMC-Na液体培养基中,置于250mL的烧瓶中,30℃,培养7 d,使其富集。(1) Take the moldy bagasse sample and place it in a sample bottle, and culture it statically in the medium: use CMC-Na as the carbon source, and use the liquid enrichment medium to obtain the cellulolytic bacteria. Place it on a vortex shaker and oscillate at the maximum frequency for 5 minutes to elute the microorganisms on the sample, take out 2mL of the bacterial liquid with a pipette gun, inoculate it in a fresh 100mL CMC-Na liquid medium, place it in a 250mL flask, and put it in a 250mL flask for 30 ℃, cultivated for 7 days to make it enrich.
(2)获得的菌液进行梯度稀释,分别吸取100μL 10-4、10-5、10-6的稀释液于CMC-Na固体平板中进行涂布,置于30℃恒温培养箱中培养5d后,再进行斜面划线培养,根据菌落形态、颜色等分离纯化单菌落。(2) The obtained bacterial solution was serially diluted, and 100 μL of 10 -4 , 10 -5 , and 10 -6 dilutions were drawn and spread on the CMC-Na solid plate, and placed in a constant temperature incubator at 30°C for 5 days. , and then carry out slant streak culture, and isolate and purify a single colony according to the colony shape and color.
(3)将分离得到的纯化菌株用打孔器分别取菌体接入刚果红培养基中,置于30℃恒温培养箱中培养5d后,测定其透明圈大小,分离出具有最大透明圈的菌株;刚果红培养基为按以下配比配制:(NH4)2SO4 2.0g,MgSO4·7H2O 0.5g,K2HPO4 1.0g,NaCl 0.5g,微晶纤维素2.0g,刚果红0.4g,琼脂20g,加超纯水至1000mL;配制后121℃湿热灭菌30min。(3) Use a hole puncher to take the isolated purified strains and insert them into the Congo red medium, place them in a constant temperature incubator at 30°C and cultivate them for 5 days, measure the size of the transparent circle, and isolate the one with the largest transparent circle. strain; Congo red medium was prepared according to the following proportions: (NH 4 ) 2 SO 4 2.0g, MgSO 4 ·7H 2 O 0.5g, K 2 HPO 4 1.0g, NaCl 0.5g, microcrystalline cellulose 2.0g, Congo red 0.4g, agar 20g, add ultra-pure water to 1000mL; after preparation, sterilize with damp heat at 121°C for 30min.
(4)利用筛选出来的菌株进行滤纸崩解实验,验证其降解能力。每个试管分装7mL滤纸条培养基,放入50mg(1cm×6cm)的滤纸(干燥后称重)作为酶解介质,将不同形态的菌株分别接种在滤纸上,在30℃恒温培养箱中培养。将显示滤纸被分解的试管进行稀释,在CMC-Na培养基进行划线培养,30℃培养72h后,将生长的单个菌落接种于滤纸培养基中培养10d。过滤收集滤纸,用超纯水洗净,在80℃下干燥并称重。还要进一步对菌株纤维素酶活(CMC酶活)进行测定,以筛选得到透明圈大、滤纸失重率高且酶活高的菌株。将菌株转接到PDB培养基中,30℃摇床培养3d,制成菌悬液,再以5%的接种量分别接种于发酵培养基中,置于30℃,200r/min的恒温振荡培养箱中培养5d后,发酵液4℃,6000r/min离心10min,上清液即为粗酶液。粗酶液中还原糖的含量通过DNS比色法测定,酶标仪 (Infinite M200Pro)540nm处测定吸光度值。将经复筛得到的菌株接入 PDA培养基进行再纯化,最后接种于PDA斜面培养基上,于4℃保存,待进一步菌种鉴定。(4) The filter paper disintegration experiment was carried out using the strains screened out to verify its degradation ability. Each test tube is divided into 7mL filter paper medium, put 50mg (1cm × 6cm) filter paper (weighed after drying) as the enzymolysis medium, inoculate the strains of different forms on the filter paper, and incubate at 30°C. cultivated in. The test tube showing that the filter paper was decomposed was diluted, and streak culture was carried out in CMC-Na medium. After culturing at 30°C for 72 hours, the grown single colony was inoculated on the filter paper medium and cultured for 10 days. The filter paper was collected by filtration, washed with ultrapure water, dried at 80°C and weighed. It is also necessary to further measure the cellulase activity (CMC enzyme activity) of the strains to screen out the strains with large transparent circles, high filter paper weight loss rate and high enzyme activity. Transfer the strain to PDB medium, culture it on a shaker at 30°C for 3 days, make a bacterial suspension, and then inoculate it in the fermentation medium with an inoculum amount of 5%, and place it in a constant temperature shaking culture at 30°C and 200r/min After culturing in the box for 5 days, the fermentation broth was centrifuged at 6000r/min for 10min at 4°C, and the supernatant was the crude enzyme solution. The content of reducing sugar in the crude enzyme solution was determined by DNS colorimetry, and the absorbance value was measured at 540nm with a microplate reader (Infinite M200Pro). The strains obtained by re-screening were inserted into PDA medium for repurification, and finally inoculated on PDA slant medium, and stored at 4°C until further identification of strains.
从分离出的菌株中筛选滤纸失重率高且酶活性高的菌株,将分离出的菌株置于恒温振荡培养箱中培养后,接入PDA培养基进行再纯化后获得。恒温震荡培养箱培养的条件为30℃,200r/min。PDA培养基为称取去皮土豆200g,葡萄糖20g,琼脂20g,pH自然,土豆切成小方块,放入水中煮沸大约30 min,然后用四层纱布过滤,在滤液中加入葡萄糖和琼脂粉,加热,用玻璃棒搅拌至葡萄糖和琼脂粉全部溶解,最后加入超纯水至1000mL,121℃湿热灭菌30min。The strains with high filter paper weight loss rate and high enzyme activity were screened from the isolated strains, and the isolated strains were cultured in a constant temperature shaking incubator, and then obtained by adding PDA medium for repurification. The conditions for culturing in a constant temperature shaking incubator are 30° C., 200 r/min. PDA medium is to weigh 200g of peeled potatoes, 20g of glucose, 20g of agar, the pH is natural, cut the potatoes into small cubes, boil them in water for about 30 minutes, filter them with four layers of gauze, add glucose and agar powder to the filtrate, Heat and stir with a glass rod until the glucose and agar powder are completely dissolved, and finally add ultrapure water to 1000mL, and sterilize with damp heat at 121°C for 30min.
实施例2Example 2
本实施例是本发明所述的一株纤维素酶产生菌木霉属A-8的降解能力的验证实施例,包括如下步骤:This embodiment is a verification example of the degradation ability of a cellulase-producing fungus Trichoderma A-8 according to the present invention, comprising the following steps:
利用筛选出来的菌株进行滤纸崩解实验,验证其降解能力。每个试管分装 7mL滤纸条培养基,放入50mg(1cm×6cm)的滤纸(干燥后称重)作为酶解介质,将不同形态的菌株分别接种在滤纸上,在30℃恒温培养箱中培养。将显示滤纸被分解的试管进行稀释,在CMC-Na培养基进行划线培养,30℃培养72h后,将生长的单个菌落接种于滤纸培养基中培养10d。过滤收集滤纸,用超纯水洗净,在80℃下干燥并称重。The filter paper disintegration test was carried out with the screened strains to verify their degradation ability. Each test tube was divided into 7mL filter paper medium, put 50mg (1cm×6cm) filter paper (weighed after drying) as the enzymolysis medium, inoculated the strains of different forms on the filter paper, and inoculated in a constant temperature incubator at 30°C. cultivated in. The test tube showing that the filter paper was decomposed was diluted, and streak culture was carried out in CMC-Na medium. After culturing at 30°C for 72 hours, the grown single colony was inoculated on the filter paper medium and cultured for 10 days. The filter paper was collected by filtration, washed with ultrapure water, dried at 80°C and weighed.
将所得菌株进行纤维素酶活的测定:Gained bacterial strain is carried out the mensuration of cellulase activity:
以筛选得到透明圈大、滤纸失重率高且酶活高的菌株。将菌株转接到PDB 培养基中,30℃摇床培养3d,制成菌悬液,再以5%的接种量分别接种于发酵培养基中,置于30℃,200r/min的恒温振荡培养箱中培养5d后,发酵液4℃,6000r/min离心10min,上清液即为粗酶液。粗酶液中还原糖的含量通过DNS比色法测定,酶标仪(Infinite M200Pro)540nm处测定吸光度值。将经复筛得到的菌株接入PDA培养基进行再纯化,最后接种于PDA斜面培养基上,于4℃保存,待进一步菌种鉴定。The strains with large transparent circle, high filter paper weight loss rate and high enzyme activity were obtained by screening. Transfer the strains to PDB medium, culture on a shaking table at 30°C for 3 days, make a bacterial suspension, and then inoculate them in the fermentation medium with an inoculum of 5%, and place them in a constant temperature shaking culture at 30°C and 200r/min After culturing in the box for 5 days, the fermentation broth was centrifuged at 6000r/min for 10min at 4°C, and the supernatant was the crude enzyme solution. The content of reducing sugar in the crude enzyme solution was determined by DNS colorimetry, and the absorbance value was measured at 540nm with a microplate reader (Infinite M200Pro). The strains obtained by re-screening were inserted into PDA medium for repurification, and finally inoculated on PDA slant medium, and stored at 4°C until further identification of strains.
实施例3Example 3
本实施例是对纤维素酶产生菌的分子鉴定。This example is the molecular identification of cellulase producing bacteria.
从菌株在PDA培养基上的形态学特征,初步判断该菌株为真菌。将菌株在 PDB培养基中液体培养48h,离心收集菌体进行研磨,之后按照真菌DNA提取试剂盒上的提取方法及步骤进行菌株DNA提取。将提取得到的DNA作为模板,使用通用引物ITS4/ITS5扩增大约450-600bp的片段。使用商业试剂盒(2× Taq PCR MasterMix,Solarbio)的PCR反应体系和聚合酶链式反应(PCR)程序,扩增得到目的片段。扩增后,在1.0%琼脂糖凝胶中迁移5μL PCR产物进行验证,在免染电泳成像系统(CHEMIDOC XRS,Bio-Rad)上观察电泳结果。将PCR产物送到广州生工进行测序,使用SeqMan软件拼接序列并截去头尾多余及引物序列,之后将拼接序列用Clustal X进行多重对比排列,最后将获得的序列用国家生物技术信息中心(http://www.ncbi.nlm.gov)的BLAST-N搜索程序,将ITS基因序列数据与GenBank数据库进行比较。对ITS基因序列进行排列,利用Mega 6.0软件在1000x引导下采用邻域连接(Neighbor Joining)方法构建系统发育树,确定菌株的进化地位。From the morphological characteristics of the strain on PDA medium, it was preliminarily judged that the strain was a fungus. The strain was cultured in PDB medium for 48 hours, and the bacteria were collected by centrifugation for grinding, and then the strain DNA was extracted according to the extraction method and steps on the fungal DNA extraction kit. The extracted DNA was used as a template, and a fragment of about 450-600bp was amplified using universal primers ITS4/ITS5. The target fragment was amplified using the PCR reaction system of a commercial kit (2×Taq PCR MasterMix, Solarbio) and the polymerase chain reaction (PCR) program. After amplification, 5 μL of PCR products were migrated in 1.0% agarose gel for verification, and the electrophoresis results were observed on the stain-free electrophoresis imaging system (CHEMIDOC XRS, Bio-Rad). The PCR products were sent to Guangzhou Sangong for sequencing, and SeqMan software was used to splice the sequences and cut off redundant head and tail sequences and primer sequences. After that, the spliced sequences were aligned in multiple comparisons with Clustal X, and finally the obtained sequences were analyzed by the National Center for Biotechnology Information ( http://www.ncbi.nlm.gov) BLAST-N search program to compare ITS gene sequence data with the GenBank database. The ITS gene sequence was arranged, and the phylogenetic tree was constructed using the Neighbor Joining method under the guidance of 1000x using Mega 6.0 software to determine the evolutionary status of the strains.
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