CN115791986A - Alzheimer's disease biomarker L-valine and application thereof - Google Patents
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Abstract
Description
技术领域technical field
本发明属于生物技术领域,涉及一种阿尔兹海默症生物标志物L-缬氨酸及其应用。The invention belongs to the field of biotechnology, and relates to an Alzheimer's disease biomarker L-valine and an application thereof.
背景技术Background technique
阿尔兹海默症(Alzheimer disease,AD),又称老年痴呆症,是一种发生于老年期的进行性发展的中枢神经系统退行性变性疾病,以渐进性记忆障碍及认知功能下降和日常生活能力丧失为特征,伴随人格改变等神经精神症状,严重影响社交与生活功能。由于阿尔兹海默症发病机制尚未完全明确,加上其早期症状比较隐秘,阿尔兹海默症患者容易被漏诊或错诊,目前对于AD的诊断主要依靠记忆量表、PET以及脑脊液、血液中Aβ、磷酸化tau蛋白等病理指标的水平检测,然而这些诊断指标在临床中的检测结果仍存在一定争议,而且对于AD发病早期的症状尚缺乏有效的检测证据,因此,对AD早期诊断新的标志物开发是AD诊疗领域的重要研究方向之一。Alzheimer's disease (Alzheimer disease, AD), also known as senile dementia, is a progressive degenerative disease of the central nervous system that occurs in old age, characterized by progressive memory impairment and cognitive function decline and daily life. It is characterized by loss of life ability, accompanied by neuropsychiatric symptoms such as personality changes, which seriously affects social and life functions. Since the pathogenesis of Alzheimer's disease is not fully clear, and its early symptoms are relatively secretive, Alzheimer's disease patients are easily missed or misdiagnosed. Currently, the diagnosis of AD mainly relies on memory scales, PET, and cerebrospinal fluid and blood. The level detection of pathological indicators such as Aβ and phosphorylated tau protein, however, the clinical detection results of these diagnostic indicators are still controversial, and there is still no effective detection evidence for the early symptoms of AD. Therefore, a new method for the early diagnosis of AD The development of markers is one of the important research directions in the field of AD diagnosis and treatment.
CN106062563A公开了一种用于阿尔兹海默症的早期诊断的生物标志物及方法,所述AD生物标志物是至少四种选自脑源性神经营养因子(BDNF)、胰岛素样生长因子-1(IGF-1)、肿瘤生长因子β1(TGF-β1)、血管内皮生长因子(VEGF)、白介素18(IL-18)和单核细胞趋化蛋白-1(MCP-1)中的生物标志物,通过分析其表达水平,能够辅助AD的早期诊断。CN106062563A discloses a biomarker and method for early diagnosis of Alzheimer's disease, said AD biomarker is at least four selected from brain-derived neurotrophic factor (BDNF), insulin-like growth factor-1 (IGF-1), tumor growth factor beta 1 (TGF-beta1), vascular endothelial growth factor (VEGF), interleukin 18 (IL-18), and monocyte chemoattractant protein-1 (MCP-1) biomarkers , by analyzing its expression level, it can assist the early diagnosis of AD.
有研究发现多种神经精神疾病如帕金森、抑郁症、自闭症等与肠道菌群失衡有关,并且80%以上AD患者存在肠道菌群失衡的现象,提示肠道菌群稳态与AD等神经退行性疾病的发病进程密切相关。宿主和肠道菌群在代谢食物物质的过程中产生大量的代谢物,肠道菌群的多样性以及丰度的改变会对机体中小分子代谢物的种类和浓度产生重要影响,有数据显示AD患者肠道菌群组成与健康同龄人不同,且越来越多证据表明各种代谢途径的紊乱可能介导AD的病理发生和发展,AD中的菌群失衡可能与机体代谢紊乱的发生有重要关联,而机体外周代谢改变又可能通过血液循环进一步导致中枢神经系统代谢紊乱。Studies have found that a variety of neuropsychiatric diseases such as Parkinson's, depression, and autism are related to intestinal flora imbalance, and more than 80% of AD patients have intestinal flora imbalance, suggesting that intestinal flora homeostasis is closely related to It is closely related to the pathogenesis of neurodegenerative diseases such as AD. The host and intestinal flora produce a large number of metabolites in the process of metabolizing food substances. The diversity and abundance of intestinal flora will have an important impact on the types and concentrations of small molecule metabolites in the body. Some data show that AD The intestinal flora composition of patients is different from that of healthy peers, and more and more evidences show that the disorder of various metabolic pathways may mediate the pathogenesis and development of AD. The imbalance of flora in AD may be important for the occurrence of metabolic disorders. The changes in peripheral metabolism of the body may further lead to metabolic disorders of the central nervous system through blood circulation.
综上所述,研究肠道菌群代谢稳态与AD发病的关系,筛选新的AD生物标志物,有助于扩充AD早期诊断的判断依据,可与其他标志物检测相互结合,提高AD诊断的准确性,有助于疾病的早期预警、病理分型以及发展阶段的预测评估等。In summary, studying the relationship between the metabolic homeostasis of intestinal flora and the onset of AD and screening new AD biomarkers will help expand the basis for early diagnosis of AD, and can be combined with other markers to improve the diagnosis of AD. The accuracy is helpful for early warning of diseases, pathological typing, and prediction and evaluation of developmental stages.
发明内容Contents of the invention
针对现有技术的不足和实际需求,本发明提供一种阿尔兹海默症生物标志物L-缬氨酸及其应用,本发明基于高分辨非靶向代谢组学分析技术对人粪便代谢物进行定性定量分析,首次将粪便中L-缬氨酸作为阿尔兹海默症标志物,通过检测粪便中L-缬氨酸水平能够辅助阿尔兹海默症早期诊断,且具备及时、方便、高特异性及高灵敏度的特点。In view of the deficiencies and actual needs of the prior art, the present invention provides an Alzheimer's disease biomarker L-valine and its application. The present invention is based on high-resolution non-targeted metabolomics analysis technology to analyze Through qualitative and quantitative analysis, L-valine in feces was used as a marker of Alzheimer's disease for the first time, and the detection of L-valine level in feces can assist in the early diagnosis of Alzheimer's disease, and it is timely, convenient, and highly effective. Features of specificity and high sensitivity.
为达上述目的,本发明采用以下技术方案:For reaching above-mentioned purpose, the present invention adopts following technical scheme:
第一方面,一种阿尔兹海默症生物标志物,所述阿尔兹海默症生物标志物为L-缬氨酸(L-Valine)。In the first aspect, a biomarker of Alzheimer's disease, said biomarker of Alzheimer's disease is L-valine (L-Valine).
L-缬氨酸(L-Valine)又称为2-氨基-3-甲基丁酸,分子式为C5H11NO2,是组成蛋白质的20种氨基酸之一,是人体必需的8种氨基酸和生糖氨基酸,它与其他两种高浓度氨基酸(异亮氨酸和亮氨酸)共同促进身体正常生长,修复组织,调节血糖,并提供需要的能量,还帮助从肝脏清除多余的氮(潜在的毒素),并将身体需要的氮运输到各个部位。L-Valine (L-Valine), also known as 2-amino-3-methylbutyric acid, has a molecular formula of C 5 H 11 NO 2 . It is one of the 20 amino acids that make up proteins and is the eight essential amino acids for the human body. and glycogenic amino acids, which, together with two other highly concentrated amino acids (isoleucine and leucine), promote normal body growth, repair tissue, regulate blood sugar, and provide needed energy, and also help remove excess nitrogen from the liver ( Potential toxins), and transport the nitrogen needed by the body to various parts.
本发明基于高分辨非靶向代谢组学分析技术对粪便代谢物进行定性定量分析,检测到阿尔兹海默症粪便样本中L-缬氨酸水平显著高于正常粪便样本,将粪便中L-缬氨酸作为阿尔兹海默症生物标志物,通过检测粪便中L-缬氨酸水平能够辅助阿尔兹海默症早期诊断。The present invention conducts qualitative and quantitative analysis on fecal metabolites based on high-resolution non-targeted metabolomics analysis technology, and detects that the level of L-valine in the feces samples of Alzheimer's disease is significantly higher than that in normal feces samples. As a biomarker of Alzheimer's disease, valine can assist in the early diagnosis of Alzheimer's disease by detecting the level of L-valine in feces.
第二方面,本发明提供如第一方面所述的阿尔兹海默症生物标志物在构建阿尔兹海默症早期诊断模型和/或制备阿尔兹海默症早期诊断装置中的应用。In the second aspect, the present invention provides the application of the Alzheimer's disease biomarker as described in the first aspect in constructing an early diagnosis model of Alzheimer's disease and/or preparing an early diagnosis device for Alzheimer's disease.
第三方面,本发明提供一种阿尔兹海默症早期诊断模型,所述阿尔兹海默症早期诊断模型的输入变量包括第一方面所述的L-缬氨酸质谱的峰强度值。In a third aspect, the present invention provides an early diagnosis model of Alzheimer's disease, the input variables of the early diagnosis model of Alzheimer's disease include the peak intensity value of the L-valine mass spectrum described in the first aspect.
优选地,所述阿尔兹海默症早期诊断模型的输出变量包括差异表达倍数,所述差异表达倍数的计算公式如方程式(1)所示:Preferably, the output variables of the Alzheimer's disease early diagnosis model include differential expression multiples, and the calculation formula of the differential expression multiples is shown in equation (1):
优选地,阿尔兹海默症阳性的判断标准为所述差异表达倍数≥1.42。Preferably, the criteria for judging positive for Alzheimer's disease is that the differential expression multiple ≥ 1.42.
本发明中,通过对正常粪便样本和AD粪便样本中L-缬氨酸质谱的峰强度值进行充分对比分析,并进行理性设计,构建了一种阿尔兹海默症早期诊断模型,所述模型以L-缬氨酸质谱的峰强度值为输入变量,以差异表达倍数为输出变量,能够快速输出结果,且充分表征L-缬氨酸水平异常的样本,从而辅助阿尔兹海默症早期诊断。In the present invention, a model for early diagnosis of Alzheimer's disease is constructed by fully comparing and analyzing the peak intensity values of L-valine mass spectrum in normal stool samples and AD stool samples, and carrying out rational design. The peak intensity of L-valine mass spectrum is used as the input variable, and the differential expression fold is used as the output variable, which can quickly output the results and fully characterize the samples with abnormal L-valine levels, thereby assisting the early diagnosis of Alzheimer's disease .
第四方面,本发明提供一种阿尔兹海默症早期诊断装置,所述装置包括如下单元:In a fourth aspect, the present invention provides an early diagnosis device for Alzheimer's disease, which includes the following units:
样本配制单元:将待测样本配制成可用于液相色谱仪分离的待测样本溶液;Sample preparation unit: prepare the sample to be tested into a sample solution to be tested that can be used for separation by liquid chromatography;
检测单元:利用所述液相色谱仪分离所述待测样本溶液,利用质谱仪对分离后样本进行数据处理,测定样本中第一方面所述的L-缬氨酸质谱的峰强度值;Detection unit: using the liquid chromatograph to separate the sample solution to be tested, using a mass spectrometer to perform data processing on the separated sample, and measuring the peak intensity value of the L-valine mass spectrum described in the first aspect in the sample;
分析单元:将检测到的L-缬氨酸质谱的峰强度值输入第三方面所述的阿尔兹海默症早期诊断模型进行分析;Analysis unit: input the detected peak intensity value of L-valine mass spectrum into the early diagnosis model of Alzheimer's disease described in the third aspect for analysis;
评估单元:输出样本对应的差异表达倍数,并判断是否为阿尔兹海默症阳性。Evaluation unit: output the differential expression multiple corresponding to the sample, and judge whether it is positive for Alzheimer's disease.
本发明的阿尔兹海默症早期诊断装置中,各单元间有效配合,简单高效,能够快速完成样本处理、检测及获得差异表达倍数,同时以经过合理设计的判断标准进行阿尔兹海默症阳性评估,对于阿尔兹海默症早期诊断具有重要意义。In the early diagnosis device for Alzheimer's disease of the present invention, each unit cooperates effectively, is simple and efficient, and can quickly complete sample processing, detection and obtain differential expression multiples, and at the same time, use rationally designed judgment criteria to detect positive results for Alzheimer's disease. Evaluation is of great significance for the early diagnosis of Alzheimer's disease.
优选地,所述待测样本包括粪便样本。Preferably, the sample to be tested comprises a stool sample.
优选地,所述待测样本溶液的配制方法包括将待测样本加入乙腈水溶液中,离心并收集上清液,得到所述待测样本溶液。Preferably, the preparation method of the sample solution to be tested includes adding the sample to be tested into an aqueous acetonitrile solution, centrifuging and collecting the supernatant to obtain the sample solution to be tested.
优选地,所述待测样本溶液的配制方法包括以下步骤:Preferably, the preparation method of the sample solution to be tested comprises the following steps:
(1)取待测样本加入预冷甲醇/乙腈/水溶液中,混合并超声25~35min(例如可以是26min、27min、28min、29min或32min),置于-20~-15℃(例如可以是-19℃、-18℃、-16℃或-17℃)静置5~15min(例如可以是6min、7min、8min、9min、10min、12min或14min),于0~4℃(例如可以是1℃、2℃或3℃)、12000~16000×g(例如可以是12200×g、12400×g、12600×g、12800×g、13200×g、12600×g、15000×g或15800×g)离心15~25min(例如可以是16min、17min、18min、19min、20min、21min、22min、23min或24min),取上清进行真空干燥,得到预处理样本;(1) Take the sample to be tested and add it to pre-cooled methanol/acetonitrile/water solution, mix and sonicate for 25-35 minutes (for example, it can be 26min, 27min, 28min, 29min or 32min), and place it at -20~-15°C (for example, it can be -19°C, -18°C, -16°C or -17°C) for 5-15min (for example, 6min, 7min, 8min, 9min, 10min, 12min or 14min), at 0-4°C (for example, 1 ℃, 2℃ or 3℃), 12000~16000×g (such as 12200×g, 12400×g, 12600×g, 12800×g, 13200×g, 12600×g, 15000×g or 15800×g) Centrifuge for 15-25 minutes (for example, 16 minutes, 17 minutes, 18 minutes, 19 minutes, 20 minutes, 21 minutes, 22 minutes, 23 minutes or 24 minutes), take the supernatant and vacuum-dry to obtain the pretreated sample;
(2)将所述预处理样本加入80~120μL乙腈水溶液中复溶,涡旋,于0~4℃、12000~16000×g(例如可以是12200×g、12400×g、12600×g、12800×g、13200×g、12600×g、15000×g或15800×g)离心10~20min(例如可以是11min、12min、13min、14min、15min、16min、17min、18min或19min),取上清液,得到所述待测样本溶液。(2) Add the pretreated sample to 80-120 μL of acetonitrile aqueous solution to re-dissolve, vortex, and place at 0-4°C, 12000-16000×g (for example, 12200×g, 12400×g, 12600×g, 12800×g, ×g, 13200×g, 12600×g, 15000×g or 15800×g) centrifuge for 10-20min (for example, 11min, 12min, 13min, 14min, 15min, 16min, 17min, 18min or 19min), take the supernatant , to obtain the sample solution to be tested.
优选地,所述甲醇/乙腈/水溶液中甲醇、乙腈和水的体积比为(1~2):(1~2):1包括但不限于1.2:2:1、1.2:1:1、2:2:1、1.4:1.5:1、1.6:1.2:1、1.8:2:1、1.9:1.8:1或1.1:1.4:1。Preferably, the volume ratio of methanol, acetonitrile and water in the methanol/acetonitrile/water solution is (1-2):(1-2):1 including but not limited to 1.2:2:1, 1.2:1:1, 2 :2:1, 1.4:1.5:1, 1.6:1.2:1, 1.8:2:1, 1.9:1.8:1 or 1.1:1.4:1.
优选地,所述乙腈水溶液中乙腈和水的体积比为(1~2):1,包括但不限于1.1:1、1.2:1、1.3:1、1.5:1、1.6:1、1.7:1、1.8:1或1.9:1。Preferably, the volume ratio of acetonitrile and water in the aqueous acetonitrile solution is (1-2):1, including but not limited to 1.1:1, 1.2:1, 1.3:1, 1.5:1, 1.6:1, 1.7:1 , 1.8:1 or 1.9:1.
优选地,所述液相色谱仪包括超高效液相色谱仪。Preferably, the liquid chromatograph includes an ultra-high performance liquid chromatograph.
优选地,所述超高效液相色谱仪包括Agilent1290InfinityLC超高效液相色谱仪。Preferably, the ultra-high performance liquid chromatograph includes an Agilent1290 InfinityLC ultra-high performance liquid chromatograph.
优选地,所述质谱仪包括串联飞行时间质谱联用仪。Preferably, the mass spectrometer comprises a tandem time-of-flight mass spectrometer.
优选地,所述串联飞行时间质谱联用仪包括ABTripleTOF6600质谱仪。Preferably, the tandem time-of-flight mass spectrometer includes an ABTripleTOF6600 mass spectrometer.
优选地,所述数据处理包括:Preferably, the data processing includes:
利用串联飞行时间质谱联用仪对分离后样本进行一级谱图和二级谱图的采集,并将所述一级谱图和二级谱图转换成mzXML格式,然后进行峰对齐、保留时间校正、提取峰面积以及结构鉴定,测定样本中第一方面所述的L-缬氨酸质谱的峰强度值。Use the tandem time-of-flight mass spectrometer to collect the first-order spectrum and second-order spectrum of the separated sample, and convert the first-order spectrum and second-order spectrum into mzXML format, and then perform peak alignment and retention time For calibration, peak area extraction and structure identification, determine the peak intensity value of the L-valine mass spectrum described in the first aspect in the sample.
作为优选的技术方案,所述阿尔兹海默症早期诊断装置包括如下单元:As a preferred technical solution, the Alzheimer's disease early diagnosis device includes the following units:
样本配制单元:将待测样本配制成可用于液相色谱仪分离的待测样本溶液;Sample preparation unit: prepare the sample to be tested into a sample solution to be tested that can be used for separation by liquid chromatography;
检测单元:利用所述液相色谱仪分离所述待测样本溶液,利用串联飞行时间质谱联用仪对分离后样本进行一级谱图和二级谱图的采集,并将所述一级谱图和二级谱图转换成mzXML格式,然后进行峰对齐、保留时间校正、提取峰面积以及结构鉴定,测定样本中第一方面所述的L-缬氨酸质谱的峰强度值;Detection unit: use the liquid chromatograph to separate the sample solution to be tested, use a tandem time-of-flight mass spectrometer to collect the first-order spectrum and second-order spectrum of the separated sample, and collect the first-order spectrum The graph and the secondary spectrogram are converted into mzXML format, and then peak alignment, retention time correction, peak area extraction and structural identification are performed to determine the peak intensity value of the L-valine mass spectrum described in the first aspect in the sample;
分析单元:将检测到的L-缬氨酸质谱的峰强度值输入第三方面所述的阿尔兹海默症早期诊断模型进行分析;Analysis unit: input the detected peak intensity value of L-valine mass spectrum into the early diagnosis model of Alzheimer's disease described in the third aspect for analysis;
评估单元:输出样本对应的差异表达倍数,并判断是否为阿尔兹海默症阳性。Evaluation unit: output the differential expression multiple corresponding to the sample, and judge whether it is positive for Alzheimer's disease.
本发明中,对粪便样本中L-缬氨酸水平进行检测,可以作为一种诊断依据,与其他检测结果结合,辅助阿尔兹海默症早期诊断,预期可以提高阿尔兹海默症诊断的准确性,但并不能单独作为能够100%诊断阿尔兹海默症的诊断指标。In the present invention, the detection of the L-valine level in the stool sample can be used as a diagnostic basis, combined with other detection results, to assist in the early diagnosis of Alzheimer's disease, and it is expected to improve the accuracy of the diagnosis of Alzheimer's disease However, it cannot be used alone as a diagnostic indicator for 100% diagnosis of Alzheimer's disease.
本发明中,通过KEGG通路分析发现L-Valine属于膜转运通路(Membranetransport pathway)中的ABC transporters途径。In the present invention, it is found through KEGG pathway analysis that L-Valine belongs to the ABC transporters pathway in the membrane transport pathway (Membrane transport pathway).
第五方面,本发明提供第一方面所述的阿尔兹海默症生物标志物在筛选治疗和/或预防阿尔兹海默症的药物中的应用。In the fifth aspect, the present invention provides the application of the Alzheimer's disease biomarker described in the first aspect in screening drugs for treating and/or preventing Alzheimer's disease.
即以第一方面所述的阿尔兹海默症生物标志物作为靶点筛选治疗和/或预防阿尔兹海默症的药物。That is, the Alzheimer's disease biomarker described in the first aspect is used as a target to screen a drug for treating and/or preventing Alzheimer's disease.
与现有技术相比,本发明具有以下有益效果:Compared with the prior art, the present invention has the following beneficial effects:
本发明首次检测到阿尔兹海默症粪便样本中L-缬氨酸水平显著高于正常粪便样本,将粪便中L-缬氨酸作为阿尔兹海默症生物标志物,并提供阿尔兹海默症早期诊断模型和装置,通过检测粪便中L-缬氨酸水平能够辅助阿尔兹海默症早期诊断,有助于无创快速检测,且具备及时、方便、高特异性及高灵敏度的特点。The present invention detects for the first time that the level of L-valine in the stool sample of Alzheimer's disease is significantly higher than that in the normal stool sample, uses L-valine in the stool as a biomarker of Alzheimer's disease, and provides Alzheimer's disease The early diagnosis model and device of Alzheimer's disease can assist in the early diagnosis of Alzheimer's disease by detecting the level of L-valine in feces, which is helpful for non-invasive and rapid detection, and has the characteristics of timeliness, convenience, high specificity and high sensitivity.
附图说明Description of drawings
图1为AD模型小鼠和野生型小鼠的粪便样本中L-缬氨酸水平图;Fig. 1 is the level figure of L-valine in the stool sample of AD model mouse and wild type mouse;
图2为AD模型小鼠和野生型小鼠的大脑皮层样本中甘露糖水平图;Figure 2 is a map of the levels of mannose in the cerebral cortex samples of AD model mice and wild-type mice;
图3为AD模型小鼠和野生型小鼠的大脑皮层样本中肌醇水平图;Figure 3 is a graph showing the level of myo-inositol in the cerebral cortex samples of AD model mice and wild-type mice;
图4为AD模型小鼠和野生型小鼠的大脑皮层样本中甘氨酸水平图。Fig. 4 is a graph showing glycine levels in cerebral cortex samples of AD model mice and wild-type mice.
具体实施方式Detailed ways
为进一步阐述本发明所采取的技术手段及其效果,以下结合实施例和附图对本发明作进一步地说明。可以理解的是,此处所描述的具体实施方式仅仅用于解释本发明,而非对本发明的限定。In order to further illustrate the technical means and effects adopted by the present invention, the present invention will be further described below in conjunction with the embodiments and accompanying drawings. It should be understood that the specific implementation manners described here are only used to explain the present invention, rather than to limit the present invention.
实施例中未注明具体技术或条件者,按照本领域内的文献所描述的技术或条件,或者按照产品说明书进行。所用试剂或仪器未注明生产厂商者,均为可通过正规渠道商购获得的常规产品。If no specific technique or condition is indicated in the examples, it shall be carried out according to the technique or condition described in the literature in this field, or according to the product specification. The reagents or instruments used were not indicated by the manufacturer, and they were all conventional products commercially available through formal channels.
实施例1Example 1
本实施例对9月龄AD模型小鼠(APP/PS1转基因小鼠,由南京大学模式动物研究所提供)与野生型(WT)小鼠的粪便样本进行代谢物定性定量分析。In this example, the qualitative and quantitative analysis of metabolites was carried out on fecal samples of 9-month-old AD model mice (APP/PS1 transgenic mice, provided by the Model Animal Research Institute of Nanjing University) and wild-type (WT) mice.
分别采集在相同条件下培养的10只AD模型小鼠和10只野生型小鼠的粪便,粪便样本采集后放干冰上速冻,然后放于-80℃冰箱保存,将野生型小鼠样本依次编号为FWT-1-1~FWT-1-10,将AD模型小鼠样本依次编号为FTG-1-1~FTG-1-10,采用超高效液相色谱-串联飞行时间质谱联用检测样本中的L-缬氨酸水平,具体方法包括:The feces of 10 AD model mice and 10 wild-type mice cultured under the same conditions were collected respectively. After the feces samples were collected, they were quickly frozen on dry ice, and then stored in a -80°C refrigerator. The wild-type mouse samples were numbered sequentially. They are FWT-1-1~FWT-1-10, and the AD model mouse samples are numbered FTG-1-1~FTG-1-10 in turn, and the samples are detected by ultra-high performance liquid chromatography-tandem time-of-flight mass spectrometry. of L-valine levels, specific methods include:
(1)取粪便样本加入预冷甲醇/乙腈/水溶液(体积比为2:2:1),涡旋混合,低温超声30min,置于-20℃静置10min,于4℃、14000×g离心20min,取上清进行真空干燥,得到预处理样本;(1) Take a stool sample and add pre-cooled methanol/acetonitrile/water solution (volume ratio: 2:2:1), vortex to mix, cryogenic ultrasound for 30 minutes, place at -20°C for 10 minutes, and centrifuge at 4°C, 14000×g 20min, take the supernatant and carry out vacuum drying to obtain the pretreated sample;
(2)将所述预处理样本加入100μL乙腈水溶液(体积比为乙腈:水=1:1)中复溶,涡旋,于4℃、14000×g离心15min,取上清液进样分析,采用Agilent1290Infinity LC超高效液相色谱系统(UHPLC)HILIC色谱柱进行分离,柱温25℃;流速0.5mL/min;进样量2μL;流动相组成包括:A相:乙酸铵和氨水混合的水溶液(乙酸铵和氨水终浓度均为25mM),B相:乙腈;梯度洗脱程序如下:0~0.5min,95%B相;0.5~7min,B相从95%线性变化至65%;7~8min,B相从65%线性变化至40%;8~9min,B相维持在40%;9~9.1min,B相从40%线性变化至95%;9.1~12min,B相维持在95%;整个分析过程中样本置于4℃自动进样器中;(2) Add the pretreated sample to 100 μL of acetonitrile aqueous solution (volume ratio: acetonitrile: water = 1:1) to redissolve, vortex, centrifuge at 4°C, 14000×g for 15 min, and take the supernatant for analysis. Agilent1290Infinity LC ultra-high performance liquid chromatography (UHPLC) HILIC column was used for separation, column temperature was 25°C; flow rate was 0.5mL/min; sample volume was 2μL; mobile phase composition included: Phase A: aqueous solution mixed with ammonium acetate and ammonia water ( The final concentrations of ammonium acetate and ammonia water are both 25mM), phase B: acetonitrile; the gradient elution program is as follows: 0~0.5min, 95% phase B; 0.5~7min, phase B changes linearly from 95% to 65%; 7~8min , phase B changes linearly from 65% to 40%; 8-9min, phase B maintains at 40%; 9-9.1min, phase B linearly changes from 40% to 95%; 9.1-12min, phase B maintains at 95%; Samples were placed in an autosampler at 4°C throughout the analysis process;
(3)采用AB Triple TOF 6600质谱仪对步骤(2)超高效液相色谱系分离后的样本进行样本一级、二级谱图的采集,ESI源条件如下:Ion Source Gas1(Gas1):60,Ion SourceGas2(Gas2):60,Curtain gas(CUR):30,source temperature:600℃,IonSapary VoltageFloating(ISVF)±5500V(正负两种模式);TOF MS scan m/z range:60-1000Da,production scan m/z range:25-1000Da,TOF MS scan accumulation time 0.20s/spectra,product ion scan accumulation time 0.05s/spectra;二级质谱采用informationdependent acquisition(IDA)获得,并且采用high sensitivity模式,Declusteringpotential(DP):±60V(正负两种模式),Collision Energy:35±15eV,IDA设置如下Exclude isotopes within 4Da,Candidate ions to monitor per cycle:10,将采集到的Wiff格式的原始数据经ProteoWizard转换成mzXML格式,然后采用XCMS软件进行峰对齐、保留时间校正和提取峰面积,对XCMS提取得到的数据进行代谢物结构鉴定,并分析样本中的L-缬氨酸水平,利用R语言工具(R package(ropls))进行变异倍数分析(Fold ChangeAnalysis,FC Analysis)、主成分分析(PCA)、正交偏最小二乘法判别分析(OPLS-DA)和T检验(Student's t-test),结果如图1及表1所示,AD模型小鼠粪便样本中L-缬氨酸水平显著高于野生型小鼠,表明可将粪便中L-缬氨酸作为阿尔兹海默症生物标志物,通过检测粪便中L-缬氨酸水平能够辅助阿尔兹海默症早期诊断。(3) AB Triple TOF 6600 mass spectrometer is used to collect the first-order and second-order spectra of the samples separated by ultra-high performance liquid chromatography in step (2). The ESI source conditions are as follows: Ion Source Gas1 (Gas1): 60 , Ion SourceGas2 (Gas2): 60, Curtain gas (CUR): 30, source temperature: 600°C, IonSapary Voltage Floating (ISVF) ± 5500V (both positive and negative modes); TOF MS scan m/z range: 60-1000Da, production scan m/z range: 25-1000Da, TOF MS scan accumulation time 0.20s/spectra, product ion scan accumulation time 0.05s/spectra; the secondary mass spectrum is acquired by information dependent acquisition (IDA), and adopts high sensitivity mode, Declustering potential ( DP): ±60V (positive and negative modes), Collision Energy: 35±15eV, IDA settings are as follows: Exclude isotopes within 4Da, Candidate ions to monitor per cycle: 10, convert the collected raw data in Wiff format into mzXML format, then use XCMS software to perform peak alignment, retention time correction and extract peak area, carry out metabolite structure identification on the data extracted by XCMS, and analyze the L-valine level in the sample, use the R language tool (R package (ropls)) for Fold Change Analysis (FC Analysis), Principal Component Analysis (PCA), Orthogonal Partial Least Squares Discriminant Analysis (OPLS-DA) and T Test (Student's t-test), the results are shown in Figure 1 As shown in Table 1, the level of L-valine in the feces samples of AD model mice was significantly higher than that of wild-type mice, indicating that L-valine in the feces can be used as a biomarker for Alzheimer's disease, and the detection of fecal Medium L-valine levels can assist in the early diagnosis of Alzheimer's disease.
表1Table 1
注:*为p<0.05。Note: * is p<0.05.
此外,进一步通过KEGG通路注释与分析发现L-缬氨酸属于Membrane transportpathway中的ABC transporters途径,ABC转运蛋白(ABC transporters),即ATP结合盒式蛋白(ATP-binding cassette transporter,ABC),是一类ATP驱动泵,由两个跨膜结构域及两个胞质侧ATP结合域组成。正常生理条件下,ABC转运蛋白是细菌质膜上糖、氨基酸、磷脂和肽的转运蛋白,是哺乳动物细胞质膜上磷脂、亲脂性药物、胆固醇和其他小分子的转运蛋白,其在肝、小肠和肾等器官细胞质膜分布丰富,能将天然毒物和代谢废物排除体外。In addition, through further KEGG pathway annotation and analysis, it was found that L-valine belongs to the ABC transporters pathway in the Membrane transport pathway. ABC transporters (ABC transporters), that is, ATP-binding cassette transporter (ABC), is a An ATP-like driven pump consisting of two transmembrane domains and two cytoplasmic ATP-binding domains. Under normal physiological conditions, the ABC transporter is a transporter of sugars, amino acids, phospholipids and peptides on the bacterial plasma membrane, and a transporter of phospholipids, lipophilic drugs, cholesterol and other small molecules on the plasma membrane of mammalian cells. The plasma membranes of cells in organs such as kidneys and kidneys are abundant, which can remove natural poisons and metabolic wastes from the body.
实施例2Example 2
本实施例对9月龄AD模型小鼠与野生型(WT)小鼠的大脑皮层样本进行代谢物定性定量分析。In this example, the qualitative and quantitative analysis of metabolites was performed on the cerebral cortex samples of 9-month-old AD model mice and wild-type (WT) mice.
分别采集在相同条件下培养的10只AD模型小鼠和10只野生型小鼠的大脑皮层样本,将野生型大脑皮层样本依次编号为CWT-1-1~CWT-1-10,将AD模型小鼠大脑皮层样本依次编号为CTG-1-1~CTG-1-10,采用超高效液相色谱-串联飞行时间质谱联用仪进行代谢物定性定量分析,具体方法包括:The cerebral cortex samples of 10 AD model mice and 10 wild-type mice cultured under the same conditions were collected respectively. The mouse cerebral cortex samples were sequentially numbered CTG-1-1~CTG-1-10, and the metabolites were qualitatively and quantitatively analyzed by ultra-high performance liquid chromatography-tandem time-of-flight mass spectrometry, and the specific methods included:
(1)将小鼠断颈处死后用手术剪剖开脑壳,暴露大脑,将大脑沿中间脑缝剖成两半,分别去掉小脑、脑干、丘脑、下皮层和海马体,剩下大脑皮层,收集左右两边完整的大脑皮层作为样本,加入预冷甲醇/乙腈/水溶液(体积比为2:2:1),涡旋混合,低温超声30min,置于-20℃静置10min,于4℃、14000×g离心20min,取上清进行真空干燥,得到预处理样本;(1) After the mouse was killed by neck dissection, the skull was cut open with surgical scissors to expose the brain, and the brain was cut into two halves along the midbrain seam, and the cerebellum, brainstem, thalamus, hypocortex and hippocampus were removed, leaving the cerebral cortex , collect the left and right sides of the complete cerebral cortex as a sample, add pre-cooled methanol/acetonitrile/water solution (volume ratio 2:2:1), vortex mix, cryogenic ultrasound for 30min, place at -20°C for 10min, and store at 4°C , Centrifuge at 14000×g for 20min, take the supernatant and carry out vacuum drying to obtain the pretreated sample;
(2)将所述预处理样本加入100μL乙腈水溶液(体积比为乙腈:水=1:1)中复溶,涡旋,于4℃、14000×g离心15min,取上清液进样分析,采用Agilent 1290Infinity LC超高效液相色谱系统(UHPLC)HILIC色谱柱进行分离,条件与实施例1相同;(2) Add the pretreated sample to 100 μL of acetonitrile aqueous solution (volume ratio: acetonitrile: water = 1:1) to redissolve, vortex, centrifuge at 4°C, 14000×g for 15 min, and take the supernatant for analysis. Adopt Agilent 1290Infinity LC ultra-high performance liquid chromatography system (UHPLC) HILIC chromatographic column to separate, and condition is identical with embodiment 1;
(3)采用AB Triple TOF 6600质谱仪对步骤(2)超高效液相色谱系分离后的样本进行样本一级、二级谱图的采集,条件与实施例1相同,将采集到的Wiff格式的原始数据经ProteoWizard转换成mzXML格式,然后采用XCMS软件进行峰对齐、保留时间校正和提取峰面积,对XCMS提取得到的数据进行代谢物结构鉴定,随后进行单变量统计分析、多维统计分析、差异代谢物筛选、差异代谢物相关性分析和KEGG通路分析,其中,OPLS-DA模型得到的变量权重值(Variable Importance for the Projection,VIP)能够用于衡量各代谢物的表达模式对各组样本分类判别的影响强度和解释能力,挖掘具有生物学意义的差异分子,本实施例综合考虑VIP值和p-value来筛选显著性差异代谢物,结果如图2-图4以及表2所示,AD模型小鼠大脑皮层组织的甘露糖(D-Mannose)、肌醇(myo-Inositol)和甘氨酸(Glycine)水平显著高于野生型小鼠,且上述代谢物均属于Membrane transport pathway中的ABCtransporters途径,此外,已有对AD患者的遗传学研究发现ABCA7是重要的AD风险基因,ABCA7基因座的遗传多态性变异可显著增加AD的发病风险,并且与Aβ沉积和脑萎缩等AD病理表型密切相关,说明Membrane transport pathway中的ABC transporters途径与阿尔兹海默症存在关联性,而本发明发现L-缬氨酸也属于Membrane transport pathway中的ABCtransporters途径,从另一层面表明粪便代谢物中L-缬氨酸水平变化可能反映AD脑中相关代谢通路的异常,对临床早期诊断具有重要意义。(3) AB Triple TOF 6600 mass spectrometer is used to collect the sample primary and secondary spectrograms of the sample after step (2) ultra-high performance liquid chromatography separation, the conditions are the same as in Example 1, and the collected Wiff format The original data were converted into mzXML format by ProteoWizard, and then XCMS software was used for peak alignment, retention time correction and peak area extraction, and the metabolite structure identification was performed on the data extracted by XCMS, followed by univariate statistical analysis, multidimensional statistical analysis, difference Metabolite screening, differential metabolite correlation analysis and KEGG pathway analysis, among which, the variable weight value (Variable Importance for the Projection, VIP) obtained by the OPLS-DA model can be used to measure the expression pattern of each metabolite and classify each group of samples Distinguish the influence strength and explanatory ability, and mine the differential molecules with biological significance. In this embodiment, the VIP value and p-value are comprehensively considered to screen the significant differential metabolites. The results are shown in Figure 2-Figure 4 and Table 2, AD The levels of mannose (D-Mannose), myo-Inositol (myo-Inositol) and glycine (Glycine) in the cerebral cortex of model mice were significantly higher than those of wild-type mice, and the above metabolites all belong to the ABCtransporters pathway in the Membrane transport pathway, In addition, genetic studies on AD patients have found that ABCA7 is an important AD risk gene, and the genetic polymorphism variation of the ABCA7 locus can significantly increase the risk of AD, and is closely related to AD pathological phenotypes such as Aβ deposition and brain atrophy. Related, it shows that the ABC transporters pathway in the Membrane transport pathway is related to Alzheimer's disease, and the present invention finds that L-valine also belongs to the ABC transporters pathway in the Membrane transport pathway, indicating from another aspect that the L-valine in the feces metabolites -The change of valine level may reflect the abnormality of related metabolic pathways in AD brain, which is of great significance for early clinical diagnosis.
表2Table 2
注:*为p<0.05,**为p<0.01。Note: * is p<0.05, ** is p<0.01.
综上所述,本发明首次检测到阿尔兹海默症粪便样本中L-缬氨酸水平显著高于正常粪便样本,将粪便中L-缬氨酸作为阿尔兹海默症生物标志物,并提供阿尔兹海默症早期诊断模型和装置,通过检测粪便中L-缬氨酸水平能够辅助阿尔兹海默症早期诊断,有助于无创快速检测,且具备及时、方便、高特异性及高灵敏度的特点。In summary, the present invention detects for the first time that the level of L-valine in the stool sample of Alzheimer's disease is significantly higher than that of the normal stool sample, and L-valine in the stool is used as a biomarker of Alzheimer's disease, and Provide an early diagnosis model and device for Alzheimer's disease. By detecting the level of L-valine in feces, it can assist in the early diagnosis of Alzheimer's disease. It is helpful for non-invasive and rapid detection, and it is timely, convenient, highly specific and highly Sensitivity features.
申请人声明,本发明通过上述实施例来说明本发明的详细方法,但本发明并不局限于上述详细方法,即不意味着本发明必须依赖上述详细方法才能实施。所属技术领域的技术人员应该明了,对本发明的任何改进,对本发明产品各原料的等效替换及辅助成分的添加、具体方式的选择等,均落在本发明的保护范围和公开范围之内。The applicant declares that the present invention illustrates the detailed methods of the present invention through the above-mentioned examples, but the present invention is not limited to the above-mentioned detailed methods, that is, it does not mean that the present invention must rely on the above-mentioned detailed methods to be implemented. Those skilled in the art should understand that any improvement of the present invention, the equivalent replacement of each raw material of the product of the present invention, the addition of auxiliary components, the selection of specific methods, etc., all fall within the scope of protection and disclosure of the present invention.
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