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CN115690207A - An automatic positioning method and device based on head clinical images - Google Patents

An automatic positioning method and device based on head clinical images Download PDF

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CN115690207A
CN115690207A CN202211274873.2A CN202211274873A CN115690207A CN 115690207 A CN115690207 A CN 115690207A CN 202211274873 A CN202211274873 A CN 202211274873A CN 115690207 A CN115690207 A CN 115690207A
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head
cvh
patient
registration
mapping relationship
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乔梁
和陆兴
舒宇航
陈欣
张静娜
张晔
王莉
冉旭
桑林琼
吴毅
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Third Military Medical University TMMU
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Abstract

本发明涉及图像处理技术领域,具体涉及一种基于头部临床影像的自动定位方法和装置,根据空间方向映射关系和空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构;CVH配准头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称组成新的CVH解剖知识图谱。对患者头部临床影像进行多平面重建,获得患者头部解剖结构;患者头部解剖结构与CVH配准头部解剖结构之间存在实时映射关系,从而患者头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称存在一一对应关系。从解剖知识图谱中选取感兴趣区域,并自动定位感兴趣区域在患者头部解剖结构中的对应位置,降低了患者头部临床影像的识别难度。

Figure 202211274873

The present invention relates to the technical field of image processing, in particular to an automatic positioning method and device based on head clinical images, which performs coordinate transformation on the head anatomical structure of CVH according to the spatial direction mapping relationship and the spatial size mapping relationship, and obtains the CVH registration head Head anatomy structure; CVH registration head anatomy structure and the position identification and organ name of each organ region in the CVH registration head anatomy structure form a new CVH anatomy knowledge map. Multi-planar reconstruction of clinical images of the patient's head is performed to obtain the anatomical structure of the patient's head; there is a real-time mapping relationship between the anatomical structure of the patient's head and the anatomical structure of the CVH-registered head, so that the anatomical structure of the patient's head and the CVH-registered head There is a one-to-one correspondence between the position identification of each organ region in the anatomical structure and the name of the organ. Select the region of interest from the anatomical knowledge map, and automatically locate the corresponding position of the region of interest in the anatomical structure of the patient's head, reducing the difficulty of identifying the clinical image of the patient's head.

Figure 202211274873

Description

一种基于头部临床影像的自动定位方法及装置An automatic positioning method and device based on head clinical images

技术领域technical field

本发明涉及图像处理技术领域,具体涉及一种基于头部临床影像的自动定位方法及装置。The invention relates to the technical field of image processing, in particular to an automatic positioning method and device based on head clinical images.

背景技术Background technique

临床医学断层影像如CT和MRI在疾病的诊疗中有着重要作用。但临床医学影像由于成像方式的抽象性和人体解剖结构的复杂性,往往需要高年资医生特别是影像科医生的专业知识和经验才能正确识读。尤其是结构复杂的头部临床医学断层影像,对于低年级医学生、跨学科科研人员、医学工程人员以及普通患者而言显得过于抽象,难以准确识别。Clinical medical tomographic images such as CT and MRI play an important role in the diagnosis and treatment of diseases. However, due to the abstraction of imaging methods and the complexity of human anatomy, clinical medical images often require the professional knowledge and experience of senior doctors, especially radiologists, to read them correctly. In particular, head clinical tomographic images with complex structures are too abstract and difficult to accurately identify for junior medical students, interdisciplinary researchers, medical engineers and ordinary patients.

对于跨学科专业人员、年轻医师、医学生来说,医学影像中的一些复杂病变区域和细微的解剖结构,非资深医学领域的专业人员很难有效定位识别。对于患者及家属来说,在疾病诊治过程中,患者及家属的主动参与意识不断增强,医疗单位也通过刻盘等方式将影像资料搭配浏览器交给个人,但现有浏览器仍需要专业医生的指导才可能帮助患者建立对病灶的直观认识,患者及家属无法自行看懂影像中的各器官区域。For interdisciplinary professionals, young physicians, and medical students, it is difficult for non-experienced medical professionals to effectively locate and identify some complex lesion areas and subtle anatomical structures in medical images. For patients and their families, in the process of disease diagnosis and treatment, the awareness of active participation of patients and their families continues to increase. Medical units also hand over image data with browsers to individuals through disk burning and other methods. However, the existing browsers still require professional doctors It is possible to help patients establish an intuitive understanding of the lesions with the help of guidance, and patients and their families cannot understand the various organ regions in the images by themselves.

因此,在强调普适性的智能信息时代,如何将临床头部临床影像中的感兴趣区域迅速定位,并呈现给非资深影像科专业人员以降低临床头部临床影像的识别难度,具有独特价值。Therefore, in the era of intelligent information that emphasizes universality, how to quickly locate the region of interest in clinical head clinical images and present them to non-senior imaging professionals to reduce the difficulty of identifying clinical head clinical images has unique value .

发明内容Contents of the invention

针对现有技术存在的不足,本发明提出一种基于头部临床影像的自动定位方法及装置,以降低患者头部临床影像的识别难度,提高普适性。Aiming at the deficiencies in the prior art, the present invention proposes an automatic positioning method and device based on head clinical images, so as to reduce the recognition difficulty of patient head clinical images and improve universality.

第一方面,本发明提供了一种基于头部临床影像的自动定位方法。In a first aspect, the present invention provides an automatic positioning method based on head clinical images.

在第一种可实现方式中,一种基于头部临床影像的自动定位方法,包括:In the first practicable manner, an automatic positioning method based on head clinical images includes:

获取患者头部临床影像;Obtain clinical images of the patient's head;

对患者头部临床影像和CVH进行配准,获得空间方向映射关系和空间尺寸映射关系;Register the clinical image of the patient's head with the CVH to obtain the spatial direction mapping relationship and spatial size mapping relationship;

根据空间方向映射关系和空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构;CVH配准头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称组成新的CVH解剖知识图谱;Carry out coordinate transformation on the head anatomical structure of CVH according to the spatial direction mapping relationship and spatial size mapping relationship to obtain the CVH registration head anatomical structure; The new CVH anatomical knowledge map is composed of location identification and organ names;

对患者头部临床影像进行多平面重建,获得患者头部解剖结构;患者头部解剖结构与CVH配准头部解剖结构之间存在实时映射关系;Perform multi-planar reconstruction of the clinical image of the patient's head to obtain the anatomical structure of the patient's head; there is a real-time mapping relationship between the anatomical structure of the patient's head and the head anatomical structure of the CVH registration;

从解剖知识图谱中选取感兴趣区域,并自动定位感兴趣区域在患者头部解剖结构中的对应位置。Select the region of interest from the anatomical knowledge map, and automatically locate the corresponding position of the region of interest in the anatomical structure of the patient's head.

结合第一种可实现方式,在第二种可实现方式中,对患者头部临床影像和CVH进行配准,获得空间方向映射关系和空间尺寸映射关系,包括:Combining with the first achievable way, in the second achievable way, the clinical image of the patient's head and the CVH are registered to obtain the spatial direction mapping relationship and the spatial size mapping relationship, including:

对患者头部临床影像和CVH进行第一次配准,获得空间方向映射关系和第一配准结果;Perform the first registration of the patient's head clinical image and CVH, and obtain the spatial direction mapping relationship and the first registration result;

根据第一配准结果对患者头部临床影像和CVH进行第二次配准,获得空间尺寸映射关系。According to the first registration result, the clinical image of the patient's head and the CVH are registered for the second time to obtain the spatial dimension mapping relationship.

结合第二种可实现方式,在第三种可实现方式中,对患者头部临床影像和CVH进行第一次配准,获得空间方向映射关系和第一配准结果,包括:In combination with the second achievable way, in the third achievable way, the first registration is performed on the clinical image of the patient's head and the CVH, and the spatial direction mapping relationship and the first registration result are obtained, including:

对患者头部临床影像进行三维轮廓重建,获得患者三维轮廓结构;Perform three-dimensional contour reconstruction on the clinical image of the patient's head to obtain the three-dimensional contour structure of the patient;

根据患者三维轮廓结构获取第一特征点;Acquiring the first feature point according to the patient's three-dimensional contour structure;

获取CVH三维轮廓结构的第二特征点;Obtain the second feature point of the CVH three-dimensional contour structure;

将第一特征点和第二特征点进行配准,获得空间方向映射关系和第一配准结果;第一配准结果为患者三维轮廓初次配准结构,患者三维轮廓初次配准结构与CVH三维轮廓结构的空间方向一致。Register the first feature point and the second feature point to obtain the spatial direction mapping relationship and the first registration result; the first registration result is the initial registration structure of the patient's 3D contour, and the initial registration structure of the patient's 3D contour and the CVH 3D The spatial orientation of the contour structure is consistent.

结合第三种可实现方式,在第四种可实现方式中,根据患者三维轮廓结构获取第一特征点,包括:In combination with the third achievable manner, in the fourth achievable manner, the first feature point is obtained according to the patient's three-dimensional contour structure, including:

从患者三维轮廓结构中分别选取眼-鼻三角区,并生成眼-鼻三角区的第一特征点。The eye-nose triangle is selected from the patient's three-dimensional contour structure, and the first feature point of the eye-nose triangle is generated.

结合第三种可实现方式,在第五种可实现方式中,根据第一配准结果对患者头部临床影像和CVH进行第二次配准,获得空间尺寸映射关系,包括:In combination with the third achievable way, in the fifth achievable way, a second registration is performed on the clinical image of the patient's head and the CVH according to the first registration result to obtain the spatial dimension mapping relationship, including:

根据患者三维轮廓结构获取第一环状轮廓;Obtaining a first circular contour according to the patient's three-dimensional contour structure;

获取CVH三维轮廓结构的第二环状轮廓;Obtain the second annular contour of the CVH three-dimensional contour structure;

在患者三维轮廓初次配准结构中,根据第一环状轮廓和第二环状轮廓进行配准,获得空间尺寸映射关系。In the initial registration structure of the patient's three-dimensional contour, registration is performed according to the first circular contour and the second circular contour to obtain a spatial dimension mapping relationship.

结合第三种可实现方式,在第六种可实现方式中,根据空间方向映射关系和空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构,包括:In combination with the third possible way, in the sixth possible way, coordinate transformation is performed on the head anatomical structure of the CVH according to the spatial direction mapping relationship and the spatial size mapping relationship to obtain the CVH registration head anatomical structure, including:

根据空间方向映射关系和空间尺寸映射关系获取齐次变换矩阵;齐次变换矩阵用于表征患者三维轮廓结构与CVH的头部解剖结构之间的坐标变换关系;Obtain a homogeneous transformation matrix according to the spatial direction mapping relationship and the spatial dimension mapping relationship; the homogeneous transformation matrix is used to characterize the coordinate transformation relationship between the patient's three-dimensional contour structure and the head anatomical structure of the CVH;

根据齐次变换矩阵对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构。According to the homogeneous transformation matrix, the coordinate transformation of the head anatomical structure of CVH is carried out, and the head anatomical structure of CVH registration is obtained.

结合第六种可实现方式,在第七种可实现方式中,齐次变换矩阵通过以下公式获取:Combined with the sixth possible way, in the seventh possible way, the homogeneous transformation matrix is obtained by the following formula:

Figure BDA0003896062410000031
其中,matrix1为空间方向映射关系的变换矩阵,matrix2i为空间尺寸映射关系的变换矩阵,matirx为齐次变换矩阵,i和n为正整数。
Figure BDA0003896062410000031
Among them, matrix1 is the transformation matrix of the spatial direction mapping relationship, matrix2 i is the transformation matrix of the spatial dimension mapping relationship, matirx is the homogeneous transformation matrix, and i and n are positive integers.

结合第一种可实现方式,在第八种可实现方式中,包括:Combined with the first possible way, the eighth way includes:

自动定位感兴趣区域在患者头部解剖结构中的对应位置后,在对应位置区域标注颜色,并将对应位置区域的所属平面进行显示。After automatically locating the corresponding position of the region of interest in the anatomical structure of the patient's head, the corresponding position area is marked with color, and the plane to which the corresponding position area belongs is displayed.

第一方面,本发明提供了一种头部临床影像自动定位装置。In a first aspect, the present invention provides an automatic head clinical image positioning device.

在第九种可实现方式中,一种头部临床影像自动定位装置,包括:In a ninth practicable manner, an automatic head clinical image positioning device includes:

获取模块,被配置为获取患者头部临床影像;an acquisition module configured to acquire clinical images of the patient's head;

配准模块,被配置为对患者头部临床影像和CVH进行配准,获得空间方向映射关系和空间尺寸映射关系;The registration module is configured to register the clinical image of the patient's head and the CVH to obtain a spatial direction mapping relationship and a spatial dimension mapping relationship;

坐标变换模块,被配置为根据空间方向映射关系和空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构;CVH配准头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称组成新的CVH解剖知识图谱;The coordinate transformation module is configured to perform coordinate transformation on the head anatomical structure of the CVH according to the spatial direction mapping relationship and the spatial dimension mapping relationship to obtain the CVH registration head anatomy structure; the CVH registration head anatomy structure and the CVH registration head anatomy structure The location identification and organ names of each organ region in the anatomical structure form a new CVH anatomical knowledge map;

多平面重建模块,被配置为对患者头部临床影像进行多平面重建,获得患者头部解剖结构;患者头部解剖结构与CVH配准头部解剖结构之间存在实时映射关系;The multi-planar reconstruction module is configured to perform multi-planar reconstruction on the clinical image of the patient's head to obtain the anatomical structure of the patient's head; there is a real-time mapping relationship between the patient's head anatomical structure and the CVH registration head anatomical structure;

自动定位模块,被配置为从解剖知识图谱中选取感兴趣区域,并自动定位感兴趣区域在患者头部解剖结构中的对应位置。The automatic positioning module is configured to select the region of interest from the anatomical knowledge map, and automatically locate the corresponding position of the region of interest in the anatomical structure of the patient's head.

由上述技术方案可知,本发明的有益技术效果如下:As can be seen from the above technical solutions, the beneficial technical effects of the present invention are as follows:

根据空间方向映射关系和空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构;CVH配准头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称组成新的CVH解剖知识图谱,然后对患者头部临床影像进行多平面重建,获得患者头部解剖结构;患者头部解剖结构与CVH配准头部解剖结构之间存在实时映射关系,因此,患者头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称存在一一对应关系。从解剖知识图谱中选取感兴趣区域,并自动定位感兴趣区域在患者头部解剖结构中的对应位置。这样,非资深领域的专业医生也可以识别出患者头部临床影像的各个器官区域,降低了患者头部临床影像的识别难度,有利于跨学科专业人员、年轻医师、医学生、患者及家属看懂患者头部临床影像的病灶情况,提高普适性。Carry out coordinate transformation on the head anatomical structure of CVH according to the spatial direction mapping relationship and spatial size mapping relationship to obtain the CVH registration head anatomical structure; The new CVH anatomical knowledge map is composed of position identification and organ names, and then multi-planar reconstruction is performed on the clinical images of the patient's head to obtain the anatomical structure of the patient's head; there is a real-time mapping between the patient's head anatomical structure and the CVH registration head anatomical structure Therefore, there is a one-to-one correspondence between the anatomical structure of the patient's head and the position identification and organ name of each organ region in the CVH-registered anatomical structure of the head. Select the region of interest from the anatomical knowledge map, and automatically locate the corresponding position of the region of interest in the anatomical structure of the patient's head. In this way, professional doctors in non-senior fields can also identify the various organ regions of the clinical images of the patient's head, which reduces the difficulty of identifying clinical images of the patient's head, and is beneficial to interdisciplinary professionals, young doctors, medical students, patients and their families. Understand the lesions in the clinical imaging of the patient's head to improve universality.

附图说明Description of drawings

为了更清楚地说明本发明具体实施方式或现有技术中的技术方案,下面将对具体实施方式或现有技术描述中所需要使用的附图作简单介绍。在所有附图中,类似的元件或部分一般由类似的附图标记标识。附图中,各元件或部分并不一定按照实际的比例绘制。In order to more clearly illustrate the specific embodiments of the present invention or the technical solutions in the prior art, the following briefly introduces the accompanying drawings that need to be used in the description of the specific embodiments or the prior art. Throughout the drawings, similar elements or parts are generally identified by similar reference numerals. In the drawings, elements or parts are not necessarily drawn in actual scale.

图1为本发明实施例提供的一种基于头部临床影像的自动定位方法的示意图;FIG. 1 is a schematic diagram of an automatic positioning method based on head clinical images provided by an embodiment of the present invention;

图2为本发明实施例提供的一种头部临床影像自动定位方法的结构示意图。Fig. 2 is a schematic structural diagram of a method for automatic head clinical image positioning provided by an embodiment of the present invention.

具体实施方式Detailed ways

下面将结合附图对本发明技术方案的实施例进行详细的描述。以下实施例仅用于更加清楚地说明本发明的技术方案,因此只作为示例,而不能以此来限制本发明的保护范围。Embodiments of the technical solutions of the present invention will be described in detail below in conjunction with the accompanying drawings. The following examples are only used to illustrate the technical solutions of the present invention more clearly, and therefore are only examples, rather than limiting the protection scope of the present invention.

需要注意的是,除非另有说明,本申请使用的技术术语或者科学术语应当为本发明所属领域技术人员所理解的通常意义。It should be noted that, unless otherwise specified, the technical terms or scientific terms used in this application shall have the usual meanings understood by those skilled in the art to which the present invention belongs.

结合图1所示,本实施例提供了一种基于头部临床影像的自动定位方法,包括:As shown in Figure 1, the present embodiment provides an automatic positioning method based on head clinical images, including:

步骤S01、获取患者头部临床影像;Step S01, obtaining clinical images of the patient's head;

步骤S02、对患者头部临床影像和CVH进行配准,获得空间方向映射关系和空间尺寸映射关系;Step S02, registering the clinical image of the patient's head with the CVH to obtain the spatial direction mapping relationship and the spatial size mapping relationship;

步骤S03、根据空间方向映射关系和空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构;CVH配准头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称组成新的CVH解剖知识图谱;Step S03, perform coordinate transformation on the head anatomical structure of CVH according to the spatial direction mapping relationship and the spatial size mapping relationship to obtain the CVH registration head anatomy structure; each of the CVH registration head anatomy structure and the CVH registration head anatomy structure The new CVH anatomical knowledge map is composed of the location identification and organ names of organ regions;

步骤S04、对患者头部临床影像进行多平面重建,获得患者头部解剖结构;CVH配准头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称组成新的CVH解剖知识图谱;Step S04: Perform multi-planar reconstruction of the clinical image of the patient's head to obtain the anatomical structure of the patient's head; the CVH-registered head anatomical structure and the position identification and organ name of each organ region in the CVH-registered head anatomical structure form a new CVH Anatomical knowledge map;

步骤S05、从解剖知识图谱中选取感兴趣区域,并自动定位感兴趣区域在患者头部解剖结构中的对应位置。Step S05, selecting the region of interest from the anatomical knowledge map, and automatically locating the corresponding position of the region of interest in the anatomical structure of the patient's head.

根据空间方向映射关系和空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构;CVH配准头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称组成新的CVH解剖知识图谱,然后对患者头部临床影像进行多平面重建,获得患者头部解剖结构;患者头部解剖结构与CVH配准头部解剖结构之间存在实时映射关系,因此,患者头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称存在一一对应关系。从解剖知识图谱中选取感兴趣区域,并根据患者头部解剖结构与CVH配准头部解剖结构之间的实时映射关系自动定位感兴趣区域在患者头部解剖结构中的对应位置。这样,非资深领域的专业医生也可以识别出患者头部临床影像的各个器官区域,降低了患者头部临床影像的识别难度,有利于跨学科专业人员、年轻医师、医学生、患者及家属看懂患者头部临床影像的病灶情况,提高普适性。Carry out coordinate transformation on the head anatomical structure of CVH according to the spatial direction mapping relationship and spatial size mapping relationship to obtain the CVH registration head anatomical structure; The new CVH anatomical knowledge map is composed of position identification and organ names, and then multi-planar reconstruction is performed on the clinical images of the patient's head to obtain the anatomical structure of the patient's head; there is a real-time mapping between the patient's head anatomical structure and the CVH registration head anatomical structure Therefore, there is a one-to-one correspondence between the anatomical structure of the patient's head and the position identification and organ name of each organ region in the CVH-registered anatomical structure of the head. Select the region of interest from the anatomical knowledge map, and automatically locate the corresponding position of the region of interest in the patient's head anatomy according to the real-time mapping relationship between the patient's head anatomy and the CVH registration head anatomy. In this way, professional doctors in non-senior fields can also identify the various organ regions of the clinical images of the patient's head, which reduces the difficulty of identifying clinical images of the patient's head, and is beneficial to interdisciplinary professionals, young doctors, medical students, patients and their families. Understand the lesions in the clinical imaging of the patient's head to improve universality.

可选地,通过CT(Computed Tomography,电子计算机断层扫描)或MRI(NuclearMagnetic Resonance Imaging,核磁共振成像)获取患者头部临床影像。Optionally, a clinical image of the head of the patient is obtained by CT (Computed Tomography, computerized tomography) or MRI (Nuclear Magnetic Resonance Imaging, nuclear magnetic resonance imaging).

在一些实施例中,CVH(Chinese Visible Human,中国可视化人体)包括中国可视化人体断面解剖数据集和相应的CT、MRI数据集,数据集中包括身体各部位的临床影像和解剖结构。CVH包括解剖知识图谱,解剖知识图谱包括各部位的解剖结构,以及结构中各器官区域的位置标识和器官名称等相关知识。CVH中的头部三维轮廓结构由CVH的头部临床影像进行三维轮廓重建获得。In some embodiments, CVH (Chinese Visible Human) includes a cross-sectional anatomical data set of Chinese visualized human body and corresponding CT and MRI data sets, and the data set includes clinical images and anatomical structures of various parts of the body. CVH includes an anatomical knowledge map, which includes the anatomical structure of each part, as well as relevant knowledge such as the position identification and organ name of each organ area in the structure. The three-dimensional contour structure of the head in CVH was obtained by reconstructing the three-dimensional contour of the head clinical images of CVH.

可选地,将CVH配准头部解剖结构代替旧的CVH解剖知识图谱中的CVH头部解剖结构,形成新的CVH解剖知识图谱。患者头部解剖结构与CVH配准头部解剖结构一一映射,CVH配准头部解剖结构中存在各器官区域的位置标识和器官名称。由此,将患者头部解剖结构中各区域对应到CVH配准头部解剖结构中各区域之后,CVH配准头部解剖结构中各器官区域的位置标识和器官名称也与患者头部解剖结构中各区域对应,根据CVH配准头部解剖结构中各器官区域的位置标识和器官名称与患者头部解剖结构中各区域之间的对应关系,实现自动定位。例如,A与B之间存在映射关系,选中A,则B对应到A,则B相关的位置标识和器官名称也对应到A。Optionally, the CVH registration head anatomical structure replaces the CVH head anatomical structure in the old CVH anatomical knowledge graph to form a new CVH anatomical knowledge graph. The anatomical structure of the patient's head is mapped one by one with the anatomical structure of the CVH registration head, and the position identification and organ name of each organ region exist in the CVH registration head anatomy structure. Therefore, after corresponding the regions in the patient's head anatomical structure to the regions in the CVH registered head anatomical structure, the position identification and organ name of each organ region in the CVH registered head anatomical structure are also consistent with the patient's head anatomical structure Corresponding to each region in the head anatomical structure, according to the corresponding relationship between the position identification and organ name of each organ region in the head anatomical structure of the CVH registration and each region in the patient's head anatomical structure, automatic positioning is realized. For example, there is a mapping relationship between A and B. If A is selected, B corresponds to A, and the location identifier and organ name related to B also corresponds to A.

可选地,对患者头部临床影像和CVH进行配准,获得空间方向映射关系和空间尺寸映射关系,包括:对患者头部临床影像和CVH进行第一次配准,获得空间方向映射关系和第一配准结果;根据第一配准结果对患者头部临床影像和CVH进行第二次配准,获得空间尺寸映射关系。Optionally, register the clinical image of the patient's head with the CVH to obtain the spatial direction mapping relationship and the spatial dimension mapping relationship, including: performing the first registration on the patient's head clinical image and the CVH to obtain the spatial direction mapping relationship and The first registration result; according to the first registration result, a second registration is performed on the clinical image of the patient's head and the CVH to obtain the spatial dimension mapping relationship.

可选地,采用迭代最近点算法(Iterative Closest Point,ICP)对患者头部临床影像和CVH进行第一次配准,获得空间方向映射关系的变换矩阵和第一配准结果;采用ICP算法根据第一配准结果对患者头部临床影像和CVH进行第二次配准,获得空间尺寸映射关系的变换矩阵。在一些实施例中,普通异源配准中,由于不同人体头部有一定形态学差异,其鼻、耳等突出部位以及额头、枕部等相似梯度部位在配准过程中容易造成错误的“最佳”匹配,即局部极值问题,因此偏差仍然比较大,配准结果十分不理想。而本申请将第一次配准的结果作为第二次配准的基础,进行二次递进配准,避免了ICP算法在迭代过程中陷入局部极值后就停止迭代而产生的错误的“最佳”匹配情况,有效地降低了偏差,提高了患者头部临床影像和CVH之间的配准程度,进而提高了自动定位的准确性。Optionally, the iterative closest point algorithm (Iterative Closest Point, ICP) is used to perform the first registration of the clinical image of the patient's head and the CVH, and the transformation matrix of the spatial direction mapping relationship and the first registration result are obtained; the ICP algorithm is used according to As a result of the first registration, a second registration is performed on the clinical image of the patient's head and the CVH to obtain the transformation matrix of the spatial size mapping relationship. In some embodiments, in ordinary heterogeneous registration, due to certain morphological differences in the heads of different human bodies, protruding parts such as noses and ears and similar gradient parts such as forehead and occiput are likely to cause errors in the registration process. "Best" matching, that is, the local extremum problem, so the deviation is still relatively large, and the registration result is very unsatisfactory. In this application, the result of the first registration is used as the basis for the second registration, and the second progressive registration is performed, which avoids the erroneous " The "best" matching situation effectively reduces the deviation and improves the registration degree between the clinical image of the patient's head and the CVH, thereby improving the accuracy of automatic positioning.

可选地,对患者头部临床影像和CVH进行第一次配准,获得空间方向映射关系和第一配准结果,包括:对患者头部临床影像进行三维轮廓重建,获得患者三维轮廓结构;根据患者三维轮廓结构获取第一特征点;获取CVH三维轮廓结构的第二特征点;将第一特征点和第二特征点进行配准,获得空间方向映射关系和第一配准结果;第一配准结果为CVH初次配准三维轮廓结构,患者三维轮廓结构与CVH初次配准三维轮廓结构的空间方向一致。Optionally, the first registration is performed on the clinical image of the patient's head and the CVH, and the spatial direction mapping relationship and the first registration result are obtained, including: performing three-dimensional contour reconstruction on the clinical image of the patient's head to obtain the three-dimensional contour structure of the patient; Obtain the first feature point according to the patient's three-dimensional contour structure; obtain the second feature point of the CVH three-dimensional contour structure; register the first feature point and the second feature point to obtain the spatial direction mapping relationship and the first registration result; the first The registration result is the first registration of the three-dimensional contour structure of the CVH, and the three-dimensional contour structure of the patient is consistent with the spatial direction of the first registration of the three-dimensional contour structure of the CVH.

可选地,通过迭代最近点算法(Iterative Closest Point,ICP)对第一特征点和第二特征点进行配准。在一些实施例中,迭代最近点算法是一种以四元数方法为基础,通过迭代计算曲面之间对应点的残差平方和来实现曲面的配准的方法。例如,有两个不同的世界坐标系下的坐标点集P={Pi,i=0,1,2,…,k}(红色块)和U={Ui,i=0,1,2,…,n}(蓝色块)。设定点集P为目标点集,U为源点集,假设P与U在空间上能够大体对应(通常设k≥n),则通过不断的旋转和平移点集U,得到新的点集U′,使得点集U′与P的同源点间距离最小(使U′和P尽量重叠)。U′可以通过刚体几何变换公式U′=RU+T得到。其中,R代表变换点集U的三维旋转矩阵,T代表变换点集U的平移向量。这一过程的核心是采用最小均方根法,通过不断修正R和T迭代计算点集U′和P之间对应点的残差平方和,找到U′与Q之间的均方根最小误差,若误差小于预设的极限值,则迭代结束,即得到配准的最优解。Optionally, the first feature point and the second feature point are registered through an iterative closest point algorithm (Iterative Closest Point, ICP). In some embodiments, the iterative closest point algorithm is a method based on the quaternion method, which implements registration of surfaces by iteratively calculating the sum of squared residuals of corresponding points between surfaces. For example, there are two sets of coordinate points P={Pi,i=0,1,2,...,k} (red block) and U={Ui,i=0,1,2, ...,n} (blue block). Set the point set P as the target point set, and U as the source point set. Assuming that P and U can roughly correspond in space (usually k≥n), then a new point set can be obtained by continuously rotating and translating the point set U U', so that the distance between the homologous points of the point set U' and P is the smallest (make U' and P overlap as much as possible). U' can be obtained by the rigid body geometric transformation formula U'=RU+T. Among them, R represents the three-dimensional rotation matrix of the transformed point set U, and T represents the translation vector of the transformed point set U. The core of this process is to use the least root mean square method to iteratively calculate the residual square sum of the corresponding points between the point sets U' and P by continuously correcting R and T, and find the root mean square minimum error between U' and Q , if the error is less than the preset limit value, the iteration ends, and the optimal solution for registration is obtained.

可选地,根据患者三维轮廓结构获取第一特征点,包括:从患者三维轮廓结构中分别选取眼-鼻三角区,并生成眼-鼻三角区的第一特征点。在一些实施例中,眼-鼻三角区的区域明显、差异大,作为面部特征点进行配准,避免了普通异源配准的局部极值问题,使配准更加准确。Optionally, acquiring the first feature points according to the patient's three-dimensional contour structure includes: selecting eye-nose triangles respectively from the patient's three-dimensional contour structure, and generating the first feature points of the eye-nose triangles. In some embodiments, the eye-nose triangle area is obvious and has large differences, and is used as facial feature points for registration, which avoids the local extremum problem of ordinary heterogeneous registration and makes registration more accurate.

可选地,根据第一配准结果对患者头部临床影像和CVH进行第二次配准,获得空间尺寸映射关系,包括:根据患者三维轮廓结构获取第一环状轮廓;获取CVH三维轮廓结构的第二环状轮廓;在患者三维轮廓结构和CVH初次配准三维轮廓结构的基础上,根据第一环状轮廓和第二环状轮廓进行配准,获得空间尺寸映射关系。Optionally, a second registration is performed on the clinical image of the patient's head and the CVH according to the first registration result to obtain a spatial dimension mapping relationship, including: obtaining the first circular contour according to the patient's three-dimensional contour structure; obtaining the CVH three-dimensional contour structure The second circular contour of the patient; on the basis of the three-dimensional contour structure of the patient and the three-dimensional contour structure of the CVH initial registration, the registration is performed according to the first circular contour and the second circular contour to obtain a spatial dimension mapping relationship.

在一些实施例中,获取环状轮廓包括利用C++开源的FO-DICOM库读取原始数据,并转换为8位位图格式,然后利用Ostu自适应阈值分割法进行二值化处理;利用开运算填补颅内小孔洞,利用FloodFill算法填补整颅内区域;最后,利用3*3的腐蚀模板,进行前后减运算,提取出一帧数据的轮廓,继续处理下一帧数据,直到批处理完成,最终实现环状轮廓的提取。In some embodiments, obtaining the annular contour includes utilizing the FO-DICOM library of C++ open source to read the original data, and converting it into an 8-bit bitmap format, and then utilizing the Ostu adaptive threshold segmentation method to perform binarization; utilizing the open operation Fill the small intracranial holes, and use the FloodFill algorithm to fill the entire intracranial area; finally, use the 3*3 corrosion template to perform forward and backward subtraction operations to extract the outline of one frame of data, and continue to process the next frame of data until the batch processing is completed. Finally, the extraction of circular contours is realized.

在一些实施例中,第一次配准确定空间方向映射关系,经过第一次配准,将患者三维轮廓结构和CVH三维轮廓结构之间的空间方向变换一致,在患者三维轮廓结构的CVH三维轮廓结构之间的空间方向一致后,通过手工从患者三维轮廓结构和CVH三维轮廓结构中分别选定数据相同的环状特征轮廓,根据环状特征轮廓进一步进行空间尺寸的配准,以适应不同人体头部的尺寸差异,使得CVH三维轮廓结构经过两次配准后与患者三维轮廓结构靠拢,从而有利于二者之间实现实时映射。同时,通过手工从患者三维轮廓结构和CVH三维轮廓结构中分别选定数据相同的环状特征轮廓,降低了局部极值的风险。In some embodiments, the spatial direction mapping relationship is determined for the first registration. After the first registration, the spatial direction transformation between the patient's three-dimensional contour structure and the CVH three-dimensional contour structure is consistent, and the CVH three-dimensional contour structure of the patient's three-dimensional contour structure After the spatial directions between the contour structures are consistent, the circular feature contours with the same data are selected manually from the patient's three-dimensional contour structure and the CVH three-dimensional contour structure, and the spatial size registration is further carried out according to the circular feature contours to adapt to different The difference in size of the human head makes the CVH three-dimensional contour structure close to the patient's three-dimensional contour structure after two registrations, which is conducive to real-time mapping between the two. At the same time, the risk of local extremum is reduced by manually selecting circular feature contours with the same data from the three-dimensional contour structure of the patient and the three-dimensional contour structure of the CVH.

可选地,根据空间方向映射关系和空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构,包括:根据空间方向映射关系和空间尺寸映射关系获取齐次变换矩阵;齐次变换矩阵用于表征患者三维轮廓结构与CVH的头部解剖结构之间的坐标变换关系;根据齐次变换矩阵对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构。Optionally, coordinate transformation is performed on the head anatomical structure of the CVH according to the spatial direction mapping relationship and the spatial size mapping relationship to obtain the CVH registration head anatomical structure, including: obtaining a homogeneous transformation according to the spatial direction mapping relationship and the spatial size mapping relationship Matrix; the homogeneous transformation matrix is used to characterize the coordinate transformation relationship between the patient's three-dimensional contour structure and the head anatomy of CVH; according to the homogeneous transformation matrix, the coordinate transformation of the head anatomy of CVH is carried out to obtain the CVH registration head anatomy structure.

可选地,通过空间方向映射关系和空间尺寸映射关系对CVH头部解剖结构进行变换,使CVH中的头部解剖结构向患者头部三维轮廓结构靠拢,与其空间方向一致,空间尺寸一致。变换获得的CVH配准头部解剖结构与患者头部三维轮廓结构之间的数据存在一一映射关系。然后对患者头部三维轮廓结构进行多平面重建,并进行同场景叠加,获得最终的多平面的患者头部解剖结构。患者头部解剖结构与CVH配准头部解剖结构一一对应;而CVH的头部解剖结构与解剖知识图谱存在一一对应关系,最终患者头部解剖结构与CVH配准头部解剖结构、解剖知识图谱均存在映射关系。Optionally, the CVH head anatomical structure is transformed through the spatial direction mapping relationship and the spatial size mapping relationship, so that the head anatomical structure in the CVH is closer to the three-dimensional contour structure of the patient's head, consistent with its spatial direction and spatial size. There is a one-to-one mapping relationship between the transformed CVH registration head anatomical structure and the data of the patient's head three-dimensional contour structure. Then, the three-dimensional outline structure of the patient's head is reconstructed in multiple planes, and the same scene is superimposed to obtain the final multi-plane anatomical structure of the patient's head. There is a one-to-one correspondence between the anatomical structure of the patient's head and the anatomical structure of the head registered by CVH; and there is a one-to-one correspondence between the anatomical structure of the head of CVH and the anatomical knowledge map. There is a mapping relationship in knowledge graphs.

在一些实施例中,患者头部临床影像(如CT/MRI等患者影像数据)作为目标图像,CVH数据集作为浮动图像向目标图像配准运动,得到齐次变换矩阵;CVH大体解剖结构分割图层随浮动图像的运动同步变换,与患者头部临床影像配准,经过三维重建,得到任意视角下的实时映射,达到病灶/器官导航的目的,配准结果允许快速评估和修正。In some embodiments, the clinical image of the patient's head (such as patient image data such as CT/MRI) is used as the target image, and the CVH data set is used as a floating image to register and move to the target image to obtain a homogeneous transformation matrix; CVH general anatomical structure segmentation map The layer changes synchronously with the movement of the floating image, and is registered with the clinical image of the patient's head. After 3D reconstruction, real-time mapping at any viewing angle is obtained to achieve the purpose of lesion/organ navigation. The registration results allow rapid evaluation and correction.

可选地,齐次变换矩阵通过以下公式获取:Optionally, the homogeneous transformation matrix is obtained by the following formula:

Figure BDA0003896062410000101
其中,matrix1为空间方向映射关系的变换矩阵,matrix2i为空间尺寸映射关系的变换矩阵,matirx为齐次变换矩阵,i和n为正整数,n代表递进配准的次数。
Figure BDA0003896062410000101
Among them, matrix1 is the transformation matrix of the spatial direction mapping relationship, matrix2 i is the transformation matrix of the spatial dimension mapping relationship, matirx is the homogeneous transformation matrix, i and n are positive integers, and n represents the number of progressive registrations.

可选地,对患者头部临床影像进行多平面重建过程中,参考现有技术中的多平面重建方法进行多平面重建,获得多个平面的患者解剖结构。Optionally, during the multi-plane reconstruction of the clinical image of the patient's head, the multi-plane reconstruction is performed with reference to the multi-plane reconstruction method in the prior art to obtain the patient's anatomical structure in multiple planes.

可选地,基于头部临床影像的自动定位方法包括:自动定位感兴趣区域在患者头部解剖结构中的对应位置后,在对应位置区域标注颜色,并将对应位置区域的所属平面进行显示。Optionally, the automatic positioning method based on head clinical images includes: after automatically positioning the corresponding position of the region of interest in the anatomical structure of the patient's head, marking the corresponding position area with a color, and displaying the plane to which the corresponding position area belongs.

可选地,本实施例提供一种基于头部临床影像的自动定位方法,包括:获取患者头部临床影像;对患者头部临床影像和CVH(Chinese Visible Human,中国可视化人体)进行二次递减配准,获得CVH配准头部解剖结构;对患者头部临床影像进行多平面重建,获得患者头部解剖结构;患者头部解剖结构与CVH中的解剖知识图谱之间实时映射;从解剖知识图谱中选取感兴趣区域,并自动定位感兴趣区域在患者头部解剖结构中的对应位置。Optionally, this embodiment provides an automatic positioning method based on head clinical images, including: acquiring the patient's head clinical images; performing a second decrement on the patient's head clinical images and CVH (Chinese Visible Human, Chinese Visual Human) Registration, to obtain CVH registration head anatomical structure; multi-planar reconstruction of clinical images of the patient's head to obtain the patient's head anatomical structure; real-time mapping between the patient's head anatomical structure and the anatomical knowledge map in CVH; from anatomical knowledge Select the region of interest in the atlas, and automatically locate the corresponding position of the region of interest in the anatomical structure of the patient's head.

结果图2所示,本发明提供了一种头部临床影像自动定位装置,包括:获取模块101、配准模块102、坐标变换模块103、多平面重建模块104、自动定位模块105。获取模块101被配置为获取患者头部临床影像;配准模块102被配置为对患者头部临床影像和CVH进行配准,获得空间方向映射关系和空间尺寸映射关系;坐标变换模块103被配置为根据空间方向映射关系和空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构;CVH配准头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称组成新的CVH解剖知识图谱;多平面重建模块104被配置为对患者头部临床影像进行多平面重建,获得患者头部解剖结构;患者头部解剖结构与CVH配准头部解剖结构之间存在实时映射关系;自动定位模块105被配置为从解剖知识图谱中选取感兴趣区域,并自动定位感兴趣区域在患者头部解剖结构中的对应位置。Results As shown in FIG. 2 , the present invention provides an automatic head clinical image positioning device, including: an acquisition module 101 , a registration module 102 , a coordinate transformation module 103 , a multi-plane reconstruction module 104 , and an automatic positioning module 105 . The acquisition module 101 is configured to acquire the clinical image of the patient's head; the registration module 102 is configured to register the clinical image of the patient's head with the CVH, and obtain the spatial direction mapping relationship and the spatial dimension mapping relationship; the coordinate transformation module 103 is configured to Carry out coordinate transformation on the head anatomical structure of CVH according to the spatial direction mapping relationship and spatial size mapping relationship to obtain the CVH registration head anatomical structure; The new CVH anatomical knowledge map is composed of the position identification and the organ name; the multi-plane reconstruction module 104 is configured to perform multi-plane reconstruction on the clinical image of the patient's head to obtain the anatomical structure of the patient's head; the anatomical structure of the patient's head is registered with the CVH head There is a real-time mapping relationship between the anatomical structures; the automatic positioning module 105 is configured to select the region of interest from the anatomical knowledge map, and automatically locate the corresponding position of the region of interest in the anatomical structure of the patient's head.

在一些实施例中,头部临床影像自动定位方法包括:步骤S21、用户选择临床影像数据,并在显示CVH标准图谱的三维轮廓结构模型和用户选择的临床影像数据的自动化三维轮廓结构模型。步骤S22、分别将两个轮廓模型调整至方便选择“眼-鼻三角区”的视角(无需设置相同大小和方位),采用划拉矩形的方式选择“眼-鼻三角区”,并根据划拉区域分别在CVH(左)和CT/MRI模型上生成蓝色和红色的特征点。S23、进行第一次配准,得到空间方向映射关系的矩阵方程,并显示粗配准结果;其中蓝色CVH特征点将向红色CT/MRI特征点靠拢。S24、自动进行环状轮廓的提取并进行第二次配准,并得到最终的齐次矩阵方程指导CVH解剖知识数据向CT/MRI数据靠拢,通过同场景叠加的方式直观呈现配准结果,并显示两组影像的叠加效果。In some embodiments, the method for automatic head clinical image positioning includes: step S21, the user selects clinical image data, and displays the three-dimensional contour structure model of the CVH standard atlas and the automatic three-dimensional contour structure model of the clinical image data selected by the user. Step S22, respectively adjust the two contour models to the angle of view that is convenient for selecting the "eye-nose triangle area" (no need to set the same size and orientation), select the "eye-nose triangle area" by drawing a rectangle, and separate Blue and red feature points are generated on the CVH (left) and CT/MRI models. S23. Perform the first registration, obtain the matrix equation of the spatial direction mapping relationship, and display the rough registration result; wherein the blue CVH feature points will move closer to the red CT/MRI feature points. S24. Automatically extract the circular contour and perform the second registration, and obtain the final homogeneous matrix equation to guide the CVH anatomical knowledge data to move closer to the CT/MRI data, visually present the registration result by superimposing the same scene, and Shows the overlay effect of the two sets of images.

进行CT/MRI的多平面重建(Multiplanar Reconstruction,MPR),显示多平面重建的结果,列出CVH大体器官列表,以便进行筛选和选择。例如选择“脑干”,即在CT/MRI的MPR重建区域相应用黄色标出脑干区域,方便用户识读。Carry out multiplanar reconstruction (MPR) of CT/MRI, display the results of multiplanar reconstruction, and list the gross organs of CVH for screening and selection. For example, select "Brainstem", that is, the brainstem area will be marked in yellow in the MPR reconstruction area of CT/MRI, which is convenient for users to read.

在一些实施例中,收集并分析临床影像集(CT和MRI)头部区域与CVH大体解剖结构的刚性结构对应特征,完成外部轮廓刚性特征的三维重建和特征点拾取。然后,采用二次递进配准方法,即首次采用“眼-鼻三角区”面部特征刚性变换确定空间方位,完成粗配准;进一步,采用环状轮廓特征进行相似性配准确定空间尺寸,解决异源配准容易产生的局部极值问题及变形问题,归纳出包含二次配准方式的标准化作业流程。最后,对头部临产影像进行重采样,并进行空间变换,获得患者头部解剖结构,根据配准结果,对CVH的大体解剖结构图层集形成的体数据场进行坐标场变换,实现向临床影像数据进行解剖结构映射的目的,同时设计并优化MPR多平面重建交互的UI接口,达到产品化的应用形态。In some embodiments, the head region of the clinical image set (CT and MRI) corresponds to the rigid structure of the general anatomical structure of the CVH, and the three-dimensional reconstruction and feature point picking of the rigid features of the external contour are completed. Then, the second progressive registration method is adopted, that is, the rigid transformation of the facial features of the "eye-nose triangle" is used to determine the spatial orientation for the first time, and the rough registration is completed; further, the circular contour feature is used to perform similarity registration to determine the spatial size, Solve the local extremum and deformation problems that are easy to occur in heterogeneous registration, and summarize the standardized operation process including the secondary registration method. Finally, the head labor images are resampled and spatially transformed to obtain the anatomical structure of the patient's head. According to the registration results, the coordinate field transformation is carried out on the volume data field formed by the general anatomical structure layer set of CVH to realize clinical The purpose of anatomical structure mapping of image data is to design and optimize the interactive UI interface of MPR multi-planar reconstruction to achieve a productized application form.

在一些实施例中,现有解剖结构知识图谱与医学影像的配准研究,对影像结构的完整性和质量有一定要求,与临床中的影像扫描规范存在差异。为防止过度医疗和控制医疗成本,临床真实数据常常是局部扫描而非科研要求的薄层高场扫描,很难达到目前主流的配准算法要求的“完整结构”和质量要求,解决方式往往需要庞大的运算消耗为代价。而本申请提供的基于头部临床影像的自动定位方法,运算量少,对影像扫码要求低,具备轻量化的特点。In some embodiments, the existing research on the registration of anatomical structure knowledge maps and medical images has certain requirements for the integrity and quality of the image structure, which is different from the clinical image scanning norms. In order to prevent excessive medical treatment and control medical costs, real clinical data are often partial scans rather than thin-slice high-field scans required by scientific research. It is difficult to meet the "complete structure" and quality requirements required by current mainstream registration algorithms, and solutions often require The cost of huge computing consumption. However, the automatic positioning method based on clinical images of the head provided by this application has a small amount of calculation, low requirements for image scanning, and has the characteristics of light weight.

在一些实施例中,本申请提供的基于头部临床影像的自动定位方法,无需专业人士讲解,无需专门的3D器官打印标注,即可将CVH中的解剖知识图谱实时映射到私有CT/MRI数据集,以智能导航的方式直观呈现当前器官区域、定位感兴趣区域,实现无人化的智能辅助“讲解”目的,并具备人机交互特点,服务于患者及家属在疾病诊治的主动参与需求以及低年级医学生、跨学科研究者、医学工程人员的工作需求,共同支持“以患者为中心”的大方向。In some embodiments, the automatic positioning method based on head clinical images provided by this application can map the anatomical knowledge map in CVH to private CT/MRI data in real time without the need for professional explanations and special 3D organ printing annotations It can visually present the current organ area and locate the area of interest in the way of intelligent navigation, realize the purpose of "explaining" with unmanned intelligent assistance, and has the characteristics of human-computer interaction, serving the active participation needs of patients and their families in disease diagnosis and treatment as well as The work needs of junior medical students, interdisciplinary researchers, and medical engineering personnel jointly support the general direction of "patient-centered".

在一些实施例中,本申请的开源组件包括:Visual Studio 2022社区版开发平台,核心研发平台;)VTK(Visualization Toolkit),用于医学断层影像的可视化重建;OpenCV,用于医学图像的形态学运算;FO-DICOM,用于医学DICOM影像的读写操作。In some embodiments, the open source components of the present application include: Visual Studio 2022 community edition development platform, core research and development platform;) VTK (Visualization Toolkit), for visual reconstruction of medical tomographic images; Operation; FO-DICOM, used for reading and writing of medical DICOM images.

可选地,一种基于头部临床影像的自动定位方法,还包括:获取测试数据,根据测试数据对基于头部临床影像的自动定位方法进行耗时测试和功能测试,获得测试结果。Optionally, an automatic head clinical image-based automatic positioning method further includes: acquiring test data, performing time-consuming tests and functional tests on the head clinical image-based automatic positioning method according to the test data, and obtaining test results.

在一些实施例中,表3为测试数据的示例表。在表3中,数据一、二、三具有不同摆位、不同的头部扫描区间,且来自三名脸型迥异的患者,因此对本文方法的适用范围可以进行一定评价,每组数据重复两次,可以得到较为客观的可重复性评价。不同于目前主流的配准算法要求影像数据的“完整结构”,体现临床真实影像扫描部位的多样化特点,本次测试中筛选了3套具有代表性的断层影像数据集。其中,数据一为CT影像,数据二至三为空间分辨率较差的MRI影像,空间分辨率分别为512*512*121、288*384*18、160*126*160,像素点间距分别为0.43*0.43*0.70、0.625*0.625*3.15、1.625*1.625*1.625。考虑到因防止过度医疗和控制医疗成本,临床的影像扫描强调病灶区域的针对性而进行局部成像的情况,数据一的扫描区间仅覆盖额部至鼻翼,数据二和数据三的范围进一步压缩到眉弓至鼻翼,可以更好地测试本项目方案在配准中的鲁棒性。In some embodiments, Table 3 is an example table of test data. In Table 3, data 1, 2, and 3 have different positions, different head scan intervals, and come from three patients with very different face shapes. Therefore, the scope of application of the method in this paper can be evaluated to a certain extent, and each set of data is repeated twice. , a more objective repeatability evaluation can be obtained. Different from the current mainstream registration algorithm that requires a "complete structure" of image data and reflects the diverse characteristics of clinical real image scanning parts, three sets of representative tomographic image data sets were screened in this test. Among them, data 1 is a CT image, data 2 to 3 are MRI images with poor spatial resolution, the spatial resolutions are 512*512*121, 288*384*18, 160*126*160, and the pixel pitches are respectively 0.43*0.43*0.70, 0.625*0.625*3.15, 1.625*1.625*1.625. Considering that to prevent over-medication and control medical costs, clinical image scanning emphasizes the specificity of the lesion area and performs local imaging. The scanning interval of data 1 only covers the forehead to the nose, and the range of data 2 and 3 is further compressed to From the eyebrow arch to the nose wing, you can better test the robustness of this project scheme in registration.

表1测试数据的示例表Table 1 Example table of test data

Figure BDA0003896062410000131
Figure BDA0003896062410000131

在一些实施例中,根据测试数据对基于头部临床影像的自动定位方法进行耗时测试,包括:将CT/MRI与配准变换后的CVH数据集在同一场景下进行三维重建,根据两者的贴合度来评价配准的精度。由于CVH是24位真彩色位图数据集,与CT、MRI的成像特征完全不同,因此设置两套体绘制的着色范围和透明度方案即可明显分隔开。测试过程中,选择部分典型解剖结构映射到CT/MRI影像上,根据覆盖部位的比例进行配准精度评价。典型的解剖结构选择脑干、视神经,两者在头部的位置关系比较有代表性,且形态尺寸适中。In some embodiments, the time-consuming test of the head clinical image-based automatic positioning method based on the test data includes: performing three-dimensional reconstruction on the same scene with the CT/MRI and the CVH dataset after registration transformation, and according to the two to evaluate the accuracy of registration. Since CVH is a 24-bit true-color bitmap data set, which is completely different from CT and MRI imaging characteristics, the coloring range and transparency scheme of the two sets of volume rendering can be clearly separated. During the test, some typical anatomical structures were selected to be mapped onto the CT/MRI images, and the registration accuracy was evaluated according to the proportion of the covered parts. Typical anatomical structures include brainstem and optic nerve, the positional relationship between the two in the head is more representative, and the shape and size are moderate.

在一些实施例中,表2为测试结果。如表2所示,在i5-4210,2.60GH在*2,8GB内存,Windows 7普通个人电脑配置下,一共进行了五次重复性测试,均正常运行,且方法耗时均未超过40秒,速度较快。In some embodiments, Table 2 is the test results. As shown in Table 2, on i5-4210, 2.60GH in *2, 8GB memory, Windows 7 ordinary personal computer configuration, a total of five repeatability tests were carried out, all of which were running normally, and the method did not take more than 40 seconds , faster.

表2Table 2

Figure BDA0003896062410000132
Figure BDA0003896062410000132

Figure BDA0003896062410000141
Figure BDA0003896062410000141

在一些实施例中,根据测试数据对基于头部临床影像的自动定位方法进行功能测试,分别将数据一、二、三的影像采用本申请的方法进行配准,获得三种配准结果。未配准的临床影像与CVH头部的原始空间摆位的同场景叠加图中,可以明显看见二者空间上的差异。配准后固定的两个视角的观察截图,通过不同视角的观察,主观认为配准结果非常理想。该方法也是普通操作者是否进行三次以上修正配准的参考依据。在此基础上邀请的五年资历影像医师对观察结果进行五分量表评价,分别对三组数据各进行三次配准后得到9次配准效果的评分,其分值分布情况见下表3:In some embodiments, the functional test of the automatic positioning method based on head clinical images is carried out according to the test data, and the images of data 1, 2, and 3 are respectively registered using the method of the present application to obtain three registration results. In the same-scene overlay of the unregistered clinical image and the original spatial arrangement of the CVH head, the spatial difference between the two can be clearly seen. Observation screenshots of two fixed viewing angles after registration. Through observations from different viewing angles, it is subjectively believed that the registration results are very ideal. This method is also a reference basis for ordinary operators to perform more than three corrected registrations. On this basis, five-year-qualified radiologists were invited to evaluate the observation results on a five-point scale, and after performing three registrations on the three groups of data, they obtained nine registration results. The distribution of the scores is shown in Table 3 below:

表3table 3

Figure BDA0003896062410000142
Figure BDA0003896062410000142

如表3所示,9次配准中,有7次配准为按流程一次成功,效果满意,有2次为需要再次进行相似配准修正才能满意,无基本达到配准目的及以下情况。并且从专业影像医师角度,普遍认为其配准结果适应本项目提出的适合大众普适性需求。As shown in Table 3, among the 9 registrations, 7 registrations were successful once according to the process, and the effect was satisfactory, and 2 registrations required another similar registration correction to be satisfactory, and the purpose of registration was not basically achieved and the following situations. And from the perspective of professional radiologists, it is generally believed that the registration results meet the general needs of the public proposed by this project.

在一些实施例中,根据测试数据对基于头部临床影像的自动定位方法进行功能测试,包括:选用脑干和视神经进行标定测量,根据测量结果进行功能测试。分别对数据一、二、三各进行两次次配准,任意抽取其中一次配准的同一位置断层图片进行标定示意。在一些实施例中,任意抽取其中一次配准的同一位置断层图片进行标定示意,获得多帧的完整解剖结构的脑干映射图和视神经映射图,以及随采样平面切割的解剖结构的脑干映射图和视神经映射图。在此基础上邀请的五年资历影像医师对观察结果进行五分量表评价,分别对三组数据各进行三次配准后得到9次配准效果的评分,其分值分布情况见下表4:In some embodiments, the function test of the head clinical image-based automatic positioning method is performed according to the test data, including: selecting the brainstem and the optic nerve for calibration measurement, and performing the function test according to the measurement results. Data 1, 2, and 3 were registered twice respectively, and the tomograms of the same position in one of the registrations were randomly selected for calibration. In some embodiments, one of the registered tomograms at the same position is arbitrarily extracted for calibration, and multiple frames of brainstem maps and optic nerve maps of the complete anatomical structure are obtained, as well as brainstem maps of the anatomical structures cut with the sampling plane diagram and optic nerve map. On this basis, five-year-qualified radiologists were invited to evaluate the observation results on a five-point scale, and each of the three groups of data was registered three times to obtain a score of nine registration effects. The distribution of the scores is shown in Table 4 below:

表4Table 4

Figure BDA0003896062410000151
Figure BDA0003896062410000151

表中对于脑干和视神经的映射准确程度显示9次配准中分别有3次和5次的匹配程度为A,分别有6次和4次的匹配程度为B,对于异源数据而言,刚性和相似配准下不可能达到完美契合程度,但大部匹配已达到本项目针对普通病患者、跨学科研究人员、医学工程人员、低年级医学生等快速地识读临床断层图像的目的,且在轻量化和处理速度上拥有极大优势。并且从专业影像医师角度,普遍认为其配准结果适应本项目提出的适合大众普适性需求。The mapping accuracy of the brainstem and optic nerve in the table shows that 3 and 5 of the 9 registrations have a matching degree of A, and 6 and 4 times of matching are respectively B. For heterogeneous data, It is impossible to achieve a perfect fit under rigid and similar registration, but most of the matching has achieved the purpose of this project to quickly read clinical tomographic images for patients with common diseases, interdisciplinary researchers, medical engineers, and junior medical students. And it has great advantages in light weight and processing speed. And from the perspective of professional radiologists, it is generally believed that the registration results meet the general needs of the public proposed by this project.

在一些实施例中,本申请提出一种基于头部临床影像的自动定位方法,使来自临床任一患者的头部区域断层影像数据(如CT、MRI)与中国可视人体数据集(CVH)进行快速地区域相似配准以及空间映射,根据CVH已有的大体解剖结构知识图谱集,标注出临床影像数据各区域的具体解剖名称,使原本抽象的临床断层影像能够与CVH高清图谱对照,并通过多种检索方式,以多平面重建(MPR)、容积重建(VR)等形式直观展现任意解剖区域,体现了一定的技术创新。本方法具有操作简单、运算轻量、绿色免安装的特点,可以以智能导航的方式向用户直观呈现当前影像的感兴趣区域,实现无人化的智能辅助“讲解”目的,服务于患者及家属的主动参与需求,以及低年级医学生、跨学科研究者、医学工程人员的工作需求,体现了一定的应用创新。根据测试结果可知,本方法能够实现异源性多模态配准的功能,能够满足本文提出的功能目标,且对临床的影像数据具有较好的适应性和可重复性,适合大众普适性需求;在普通个人电脑上的处理时间均小于40秒,具有很好的轻量化优势;并可运行在任意Windows桌面系统的.NET Framework4.0以上版本,达到了基于头部CT/MRI的轻量化智能定位系统的开发要求。In some embodiments, the present application proposes an automatic positioning method based on head clinical images, which combines the tomographic image data (such as CT, MRI) of the head region from any clinical patient with the Chinese Visual Human Dataset (CVH) Carry out rapid regional similarity registration and spatial mapping, and mark the specific anatomical names of each region of clinical image data according to CVH's existing general anatomical structure knowledge atlas, so that the original abstract clinical tomographic images can be compared with CVH high-definition atlases, and Through a variety of retrieval methods, any anatomical region can be intuitively displayed in the form of multi-planar reconstruction (MPR) and volume reconstruction (VR), which reflects certain technological innovations. This method has the characteristics of simple operation, light calculation, and green installation-free. It can intuitively present the interested area of the current image to the user in the form of intelligent navigation, realize the purpose of "explaining" with unmanned intelligent assistance, and serve patients and their families. The active participation needs of the students, as well as the work needs of junior medical students, interdisciplinary researchers, and medical engineering personnel, reflect a certain degree of application innovation. According to the test results, it can be seen that this method can realize the function of heterogeneous multimodal registration, can meet the functional goals proposed in this paper, and has good adaptability and repeatability to clinical image data, and is suitable for the general public Requirements; the processing time on ordinary personal computers is less than 40 seconds, which has a very good lightweight advantage; and can run on any Windows desktop system. NET Framework4. Quantify the development requirements of the intelligent positioning system.

最后应说明的是:以上实施例仅用以说明本发明的技术方案,而非对其限制;尽管参照前述各实施例对本发明进行了详细的说明,本领域的普通技术人员应当理解:其依然可以对前述各实施例所记载的技术方案进行修改,或者对其中部分或者全部技术特征进行等同替换;而这些修改或者替换,并不使相应技术方案的本质脱离本发明各实施例技术方案的范围,其均应涵盖在本发明的权利要求和说明书的范围当中。Finally, it should be noted that: the above embodiments are only used to illustrate the technical solutions of the present invention, rather than to limit them; although the present invention has been described in detail with reference to the foregoing embodiments, those of ordinary skill in the art should understand that: it still The technical solutions described in the foregoing embodiments may be modified, or some or all of the technical features may be equivalently replaced; and these modifications or replacements do not make the essence of the corresponding technical solutions depart from the scope of the technical solutions of the embodiments of the present invention. , which should be included within the scope of the claims and description of the present invention.

Claims (9)

1.一种基于头部临床影像的自动定位方法,其特征在于,包括:1. An automatic positioning method based on head clinical images, characterized in that, comprising: 获取患者头部临床影像;Obtain clinical images of the patient's head; 对所述患者头部临床影像和CVH进行配准,获得空间方向映射关系和空间尺寸映射关系;Registering the clinical image of the patient's head with the CVH to obtain a spatial direction mapping relationship and a spatial dimension mapping relationship; 根据所述空间方向映射关系和所述空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构;所述CVH配准头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称组成新的CVH解剖知识图谱;Perform coordinate transformation on the head anatomical structure of the CVH according to the spatial direction mapping relationship and the spatial size mapping relationship to obtain the CVH registration head anatomy structure; the CVH registration head anatomy structure and the CVH registration head anatomy The position identification and organ name of each organ region in the structure constitute a new CVH anatomical knowledge map; 对所述患者头部临床影像进行多平面重建,获得患者头部解剖结构;所述患者头部解剖结构与CVH配准头部解剖结构之间存在实时映射关系;performing multi-plane reconstruction on the patient's head clinical image to obtain the patient's head anatomy; there is a real-time mapping relationship between the patient's head anatomy and the CVH registration head anatomy; 从所述解剖知识图谱中选取感兴趣区域,并自动定位所述感兴趣区域在患者头部解剖结构中的对应位置。The region of interest is selected from the anatomical knowledge map, and the corresponding position of the region of interest in the anatomical structure of the patient's head is automatically located. 2.根据权利要求1所述的方法,其特征在于,对所述患者头部临床影像和CVH进行配准,获得空间方向映射关系和空间尺寸映射关系,包括:2. The method according to claim 1, characterized in that, registering the patient's head clinical image and CVH to obtain a spatial direction mapping relationship and a spatial dimension mapping relationship, comprising: 对所述患者头部临床影像和CVH进行第一次配准,获得空间方向映射关系和第一配准结果;Performing the first registration on the clinical image of the patient's head and the CVH to obtain the spatial direction mapping relationship and the first registration result; 根据所述第一配准结果对所述患者头部临床影像和CVH进行第二次配准,获得空间尺寸映射关系。A second registration is performed on the clinical image of the head of the patient and the CVH according to the first registration result to obtain a spatial dimension mapping relationship. 3.根据权利要求2所述的方法,其特征在于,对所述患者头部临床影像和CVH进行第一次配准,获得空间方向映射关系和第一配准结果,包括:3. The method according to claim 2, wherein the first registration is performed on the clinical image of the patient's head and the CVH, and the spatial direction mapping relationship and the first registration result are obtained, including: 对患者头部临床影像进行三维轮廓重建,获得患者三维轮廓结构;Perform three-dimensional contour reconstruction on the clinical image of the patient's head to obtain the three-dimensional contour structure of the patient; 根据所述患者三维轮廓结构获取第一特征点;Acquiring first feature points according to the patient's three-dimensional contour structure; 获取CVH三维轮廓结构的第二特征点;Obtain the second feature point of the CVH three-dimensional contour structure; 将所述第一特征点和所述第二特征点进行配准,获得空间方向映射关系和第一配准结果;所述第一配准结果为CVH初次配准三维轮廓结构,所述患者三维轮廓结构与CVH初次配准三维轮廓结构的空间方向一致。Registering the first feature point and the second feature point to obtain a spatial direction mapping relationship and a first registration result; the first registration result is a CVH initial registration three-dimensional contour structure, and the patient's three-dimensional The contour structure is consistent with the spatial direction of the three-dimensional contour structure in the first CVH registration. 4.根据权利要求3所述的方法,其特征在于,根据所述患者三维轮廓结构获取第一特征点,包括:4. The method according to claim 3, wherein obtaining the first feature point according to the patient's three-dimensional contour structure comprises: 从患者三维轮廓结构中分别选取眼-鼻三角区,并生成眼-鼻三角区的第一特征点。The eye-nose triangle is selected from the patient's three-dimensional contour structure, and the first feature point of the eye-nose triangle is generated. 5.根据权利要求3所述的方法,其特征在于,根据所述第一配准结果对所述患者头部临床影像和CVH进行第二次配准,获得空间尺寸映射关系,包括:5. The method according to claim 3, wherein, according to the first registration result, the clinical image of the patient's head and the CVH are registered for the second time to obtain a spatial dimension mapping relationship, including: 根据所述患者三维轮廓结构获取第一环状轮廓;Acquiring a first circular contour according to the patient's three-dimensional contour structure; 获取CVH三维轮廓结构的第二环状轮廓;Obtain the second annular contour of the CVH three-dimensional contour structure; 在所述患者三维轮廓结构和所述CVH初次配准三维轮廓结构中,根据所述第一环状轮廓和所述第二环状轮廓进行配准,获得空间尺寸映射关系。In the three-dimensional contour structure of the patient and the three-dimensional contour structure for the first registration of the CVH, registration is performed according to the first circular contour and the second circular contour to obtain a spatial dimension mapping relationship. 6.根据权利要求3所述的方法,其特征在于,根据所述空间方向映射关系和所述空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构,包括:6. The method according to claim 3, wherein, according to the spatial direction mapping relationship and the spatial size mapping relationship, the head anatomical structure of the CVH is coordinate transformed to obtain the CVH registration head anatomical structure, including : 根据所述空间方向映射关系和所述空间尺寸映射关系获取齐次变换矩阵;所述齐次变换矩阵用于表征患者三维轮廓结构与CVH的头部解剖结构之间的坐标变换关系;Acquiring a homogeneous transformation matrix according to the spatial direction mapping relationship and the spatial size mapping relationship; the homogeneous transformation matrix is used to characterize the coordinate transformation relationship between the patient's three-dimensional contour structure and the head anatomical structure of CVH; 根据所述齐次变换矩阵对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构。Coordinate transformation is performed on the head anatomical structure of the CVH according to the homogeneous transformation matrix to obtain the CVH registered head anatomical structure. 7.根据权利要求6所述的方法,其特征在于,所述齐次变换矩阵通过以下公式获取:7. The method according to claim 6, wherein the homogeneous transformation matrix is obtained by the following formula:
Figure FDA0003896062400000021
其中,matrix1为空间方向映射关系的变换矩阵,matrix2i为空间尺寸映射关系的变换矩阵,matirx为齐次变换矩阵,i和n为正整数。
Figure FDA0003896062400000021
Among them, matrix1 is the transformation matrix of the spatial direction mapping relationship, matrix2 i is the transformation matrix of the spatial dimension mapping relationship, matirx is the homogeneous transformation matrix, and i and n are positive integers.
8.根据权利要求1所述的方法,其特征在于,包括:8. The method of claim 1, comprising: 自动定位所述感兴趣区域在患者头部解剖结构中的对应位置后,在所述对应位置区域标注颜色,并将所述对应位置区域的所属平面进行显示。After automatically locating the corresponding position of the region of interest in the anatomical structure of the patient's head, the region of the corresponding position is marked with a color, and the plane to which the region of the corresponding position belongs is displayed. 9.一种头部临床影像自动定位装置,其特征在于,包括:9. A head clinical image automatic positioning device, characterized in that it comprises: 获取模块,被配置为获取患者头部临床影像;an acquisition module configured to acquire clinical images of the patient's head; 配准模块,被配置为对所述患者头部临床影像和CVH进行配准,获得空间方向映射关系和空间尺寸映射关系;The registration module is configured to register the clinical image of the patient's head with the CVH to obtain a spatial direction mapping relationship and a spatial size mapping relationship; 坐标变换模块,被配置为根据空间方向映射关系和空间尺寸映射关系对CVH的头部解剖结构进行坐标变换,获得CVH配准头部解剖结构;所述CVH配准头部解剖结构与CVH配准头部解剖结构中各器官区域的位置标识和器官名称组成新的CVH解剖知识图谱;The coordinate transformation module is configured to perform coordinate transformation on the head anatomical structure of the CVH according to the spatial direction mapping relationship and the spatial dimension mapping relationship to obtain the CVH registration head anatomy structure; the CVH registration head anatomy structure and the CVH registration The location identification and organ names of each organ region in the head anatomy form a new CVH anatomical knowledge map; 多平面重建模块,被配置为对所述患者头部临床影像进行多平面重建,获得患者头部解剖结构;所述患者头部解剖结构与CVH配准头部解剖结构之间存在实时映射关系;The multi-plane reconstruction module is configured to perform multi-plane reconstruction on the patient's head clinical image to obtain the patient's head anatomy; there is a real-time mapping relationship between the patient's head anatomy and the CVH registration head anatomy; 自动定位模块,被配置为从所述解剖知识图谱中选取感兴趣区域,并自动定位所述感兴趣区域在患者头部解剖结构中的对应位置。The automatic positioning module is configured to select the region of interest from the anatomical knowledge map, and automatically locate the corresponding position of the region of interest in the anatomical structure of the patient's head.
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