CN115232834A - Gene editing system for construction of OCA-1A albinism model pig nuclear transfer donor cells and its application - Google Patents
Gene editing system for construction of OCA-1A albinism model pig nuclear transfer donor cells and its application Download PDFInfo
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Abstract
本发明公开了用于构建OCA‑1A型白化病模型猪核移植供体细胞的基因编辑系统及其应用。本发明提供了一种制备重组细胞的方法:用SEQ ID NO:18所示的DNA分子取代猪细胞的染色体DNA中SEQ ID NO:19所示的DNA分子,得到重组细胞。实现方式:将靶序列结合区如SEQ ID NO:16中第3‑22位核苷酸所示的TYR‑gRNA1、靶序列结合区如SEQ ID NO:17中第3‑22位核苷酸所示的TYR‑gRNA2、SEQ ID NO:18所示的TYR‑E1mut‑ss126和NCN蛋白共转染猪细胞。本发明对于研发OCA‑1A型白化病药物的研发及揭示该病的发病机制具有重大应用价值。The invention discloses a gene editing system for constructing OCA-1A type albinism model pig nuclear transplantation donor cells and its application. The present invention provides a method for preparing recombinant cells: the DNA molecules shown in SEQ ID NO: 19 in the chromosomal DNA of pig cells are replaced with the DNA molecules shown in SEQ ID NO: 18 to obtain recombinant cells. Implementation method: the target sequence binding region is TYR-gRNA1 shown in nucleotides 3-22 in SEQ ID NO:16, and the target sequence binding region is shown in nucleotides 3-22 in SEQ ID NO:17. Pig cells were co-transfected with TYR-gRNA2 shown in SEQ ID NO: 18, TYR-E1mut-ss126 shown in SEQ ID NO: 18, and NCN protein. The invention has great application value for the research and development of OCA-1A albinism drugs and for revealing the pathogenesis of the disease.
Description
技术领域technical field
本发明属于生物技术领域,具体属于基因编辑技术领域,更具体基于CRISPR/Cas9系统及ssODN同源重组技术的用于构建OCA-1A型白化病模型猪核移植供体细胞的基因编辑系统及其应用。The invention belongs to the field of biotechnology, in particular to the field of gene editing technology, and more particularly, based on the CRISPR/Cas9 system and ssODN homologous recombination technology, a gene editing system for constructing OCA-1A albinism model pig nuclear transplantation donor cells and its application .
背景技术Background technique
基因编辑是近年来不断取得重大发展的一种生物技术,其包括从基于同源重组的基因编辑到基于核酸酶的ZFN、TALEN、CRISPR/Cas9等编辑技术,其中CRISPR/Cas9技术是当前最先进的基因编辑技术。目前,基因编辑技术被越来越多地应用到动物模型的制作上。Gene editing is a biotechnology that has made significant progress in recent years, including gene editing based on homologous recombination to nuclease-based editing technologies such as ZFN, TALEN, CRISPR/Cas9, among which CRISPR/Cas9 technology is currently the most advanced. gene editing technology. At present, gene editing technology is increasingly applied to the production of animal models.
同源重组(HDR)是通过序列同源性交换DNA序列信息:即修复模板中包含所需插入片段,修复模板的两端则是与插入位点附近具有序列同源性的重组臂。过去通常使用双链DNA(dsDNA)作为修复模板,但最近的研究揭示了单链寡核苷酸脱氧核苷酸(ssODN)作为HDR供体模板的优越性。首先,ssODN作为供体模板比dsDNA模板的插入位点特异性高,dsDNA模板容易产生随机插入。其次,ssODN对同源重组臂的长度要求比dsDNA模板更短,单侧30-60个碱基的重组臂设计可以获得高效且稳定的HDR,相比类似的dsDNA模板,其提供的插入效率更高。第三,dsDNA容易被NHEJ修复途径合并,从而导致同源臂的复制或者dsDNA模板的部分整合,而ssODN就不易产生这种现象。另外,dsDNAs对培养的细胞是有害的,线型或者质粒dsDNAs的转染效率较低,并使细胞产生不良反应,而ssODN模板在这些方面就更有优势。Homologous recombination (HDR) is the exchange of DNA sequence information through sequence homology: that is, the repair template contains the desired insert, and the two ends of the repair template are recombination arms with sequence homology near the insertion site. In the past, double-stranded DNA (dsDNA) was commonly used as a repair template, but recent studies have revealed the superiority of single-stranded oligonucleotide deoxynucleotides (ssODN) as HDR donor templates. First, ssODN as a donor template has higher insertion site specificity than dsDNA template, and dsDNA template is prone to random insertion. Secondly, ssODN requires shorter homologous recombination arms than dsDNA templates. The design of recombination arms of 30-60 bases on one side can achieve efficient and stable HDR, which provides higher insertion efficiency than similar dsDNA templates. high. Third, dsDNA is easily incorporated by the NHEJ repair pathway, leading to duplication of homology arms or partial integration of the dsDNA template, while ssODN is not prone to this phenomenon. In addition, dsDNAs are harmful to cultured cells, and linear or plasmid dsDNAs have lower transfection efficiency and cause adverse cell reactions, and ssODN templates have more advantages in these aspects.
白化病(albinism)是由于黑色素合成减少或缺乏而导致的多种遗传性疾病的总称,主要表现为皮肤、毛发以及眼部的色素减退。多种基因的突变均可导致白化病的症状。根据色素缺失的部位以及有无其他系统异常,可将白化病分为非综合征性白化病和综合征性白化病两大类。非综合征白化病又可再分为只有眼部色素缺乏的眼白化病(OA)和皮肤、毛发、眼睛均有色素缺失(即具有全身症状)的眼及皮肤白化病(oculocutaneousalbinism,OCA)。Albinism is a general term for a variety of hereditary diseases caused by reduced or lack of melanin synthesis, mainly manifested as hypopigmentation of the skin, hair and eyes. Mutations in a variety of genes can cause the symptoms of albinism. Albinism can be divided into two categories: non-syndromic albinism and syndromic albinism, according to the location of pigment loss and the presence or absence of other system abnormalities. Non-syndromic albinism can be subdivided into ocular albinism (OA) with only ocular pigment deficiency and oculocutaneous albinism (OCA) with pigment loss in skin, hair, and eyes (ie, with systemic symptoms).
OCA是一组以眼、皮肤、毛发黑色素沉着减少或缺乏为主要临床表现的常染色体隐性遗传病。超过90%的白化病患者为OCA,一般是由黑色素合成或转运相关基因突变所引起的,主要临床表现为普遍色素沉着不足,眼部改变包括黄斑中心凹发育不良、屈光不正、视力低下、畏光、虹膜半透明、眼球震颤、眼底着色不足及视觉纤维通路异常等。近年来,OCA已根据发生突变的基因进行分类:酪氨酸酶基因(TYR)突变导致OCA1,OCA2基因(曾被命名为P基因)突变导致OCA2,酪氨酸酶相关蛋白-1基因(TYRP1)突变导致OCA3,SLC45A2基因(曾被命名为MATP或AIM1)突变导致OCA4。OCA is a group of autosomal recessive genetic diseases with reduced or lack of melanin pigmentation in the eyes, skin and hair as the main clinical manifestations. More than 90% of patients with albinism have OCA, which is generally caused by mutations in genes related to melanin synthesis or transport. Light, iris translucency, nystagmus, hypopigmentation of the fundus and abnormalities of the visual fiber pathway. In recent years, OCAs have been classified according to the genes in which they are mutated: mutations in the tyrosinase gene (TYR) lead to OCA1, mutations in the OCA2 gene (previously named the P gene) lead to OCA2, and mutations in the tyrosinase-related protein-1 gene (TYRP1 ) mutations lead to OCA3, and mutations in the SLC45A2 gene (previously named MATP or AIM1) lead to OCA4.
OCA-1型约占OCA的40-50%,是TYR基因突变致使其编码的酪氨酸酶功能丧失引起的。已有研究结果表明,根据酪氨酸酶活性是否完全丧失,OCA-1可分为两型:OCA-1A和OCA-1B,两者在出生时无法区分。OCA-1A患者酪氨酸酶活性完全丧失,是最严重的类型,患者皮肤和眼睛色素完全缺失,视觉敏锐度下降至5%。OCA-1B患者体内酪氨酸酶活性明显下降,但尚未完全缺失,患者皮肤、头发和眼色素可以随年龄增长而增加,并可被晒黑。OCA-1 type accounts for about 40-50% of OCA, and is caused by the loss of function of the tyrosinase encoded by TYR gene mutation. Studies have shown that, depending on whether tyrosinase activity is completely lost, OCA-1 can be divided into two types: OCA-1A and OCA-1B, which are indistinguishable at birth. OCA-1A patients have a complete loss of tyrosinase activity, the most severe type, with complete loss of skin and eye pigment, and a drop in visual acuity to 5%. The activity of tyrosinase in patients with OCA-1B is significantly decreased, but not completely absent. The skin, hair and eye pigment of patients can increase with age and can be tanned.
研究由TYR突变导致OCA-1型的发生发展机制及研发相应的药物均需要在动物模型的基础上进行,目前常用的动物模型为小鼠模型,然而小鼠不论从体型、器官大小、生理、病理等方面都与人相差巨大,不能真实地模拟人类正常的生理、病理状态。而猪作为大动物,是人类长期以来主要的肉食供应动物,其体型大小和生理功能与人类近似,易于大规模繁殖饲养,而且在伦理道德及动物保护等方面要求较低,是理想的人类疾病模型动物。The research on the occurrence and development mechanism of OCA-1 type caused by TYR mutation and the development of corresponding drugs need to be carried out on the basis of animal models. The commonly used animal model is the mouse model. Pathological and other aspects are very different from human beings, and cannot truly simulate the normal physiological and pathological states of human beings. As a large animal, pig has been the main meat supply animal for humans for a long time. Its body size and physiological function are similar to those of humans. It is easy to be bred and raised on a large scale, and has lower requirements on ethics and animal protection. It is an ideal human disease. model animal.
发明内容SUMMARY OF THE INVENTION
本发明的目的是提供用于构建OCA-1A型白化病模型猪核移植供体细胞的基因编辑系统及其应用。The purpose of the present invention is to provide a gene editing system for constructing OCA-1A albinism model pig nuclear transplantation donor cells and its application.
本发明提供了一种制备重组细胞的方法,包括如下步骤:用SEQ ID NO:18所示的DNA分子取代猪细胞的染色体DNA中SEQ ID NO:19所示的DNA分子,得到重组细胞。The present invention provides a method for preparing recombinant cells, which includes the following steps: replacing the DNA molecules shown in SEQ ID NO: 19 in the chromosomal DNA of pig cells with the DNA molecules shown in SEQ ID NO: 18 to obtain recombinant cells.
用SEQ ID NO:18所示的DNA分子取代猪细胞的染色体DNA中SEQ ID NO:19所示的DNA分子的实现方式为:将TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和NCN蛋白共转染猪细胞。The implementation manner of replacing the DNA molecule shown in SEQ ID NO: 19 in the chromosomal DNA of pig cells with the DNA molecule shown in SEQ ID NO: 18 is as follows: TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and NCN protein Co-transfection of pig cells.
所述共转染具体采用电击转染的方式。The co-transfection specifically adopts the mode of electric shock transfection.
电击转染的参数设置具体可为:1450V、10ms、3pulse。The specific parameter settings of electroporation transfection can be: 1450V, 10ms, 3pulse.
所述共转染具体可采用哺乳动物核转染试剂盒(Neon kit,Thermofisher)与NeonTM transfection system电转仪。For the co-transfection, a mammalian nucleofection kit (Neon kit, Thermofisher) and a NeonTM transfection system electroporator may be used.
本发明还提供了TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和NCN蛋白在制备试剂盒中的应用。The invention also provides the application of TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and NCN protein in the preparation kit.
本发明还提供了TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和PRONCN蛋白在制备试剂盒中的应用。The invention also provides the application of TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and PRONCN proteins in the preparation kit.
本发明还提供了TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和特异质粒在制备试剂盒中的应用。The invention also provides the application of TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and specific plasmids in the preparation kit.
本发明还提供了一种试剂盒,包括TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和NCN蛋白。The present invention also provides a kit comprising TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and NCN protein.
本发明还提供了一种试剂盒,包括TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和PRONCN蛋白。The present invention also provides a kit comprising TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and PRONCN protein.
本发明还提供了一种试剂盒,包括TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和特异质粒。The present invention also provides a kit comprising TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and a specific plasmid.
以上任一所述试剂盒还包括猪细胞。Any of the above kits also include pig cells.
以上任一所述试剂盒的用途为如下(a)或(b)或(c):(a)制备重组细胞;(b)制备白化病模型猪;(c)制备白化病细胞模型或白化病组织模型或白化病器官模型。The use of any one of the above kits is as follows (a) or (b) or (c): (a) preparation of recombinant cells; (b) preparation of albinism model pigs; (c) preparation of albinism cell models or albinism tissue models or Albinism Organ Model.
TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和NCN蛋白的配比依次为:0.8-1.2μgTYR-gRNA1:0.8-1.2μg TYR-gRNA2:1.8-2.2μg TYR-E1mut-ss126:3-5μg NCN蛋白。The ratios of TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and NCN protein were as follows: 0.8-1.2 μg TYR-gRNA1: 0.8-1.2 μg TYR-gRNA2: 1.8-2.2 μg TYR-E1mut-ss126: 3-5 μg NCN protein.
TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和NCN蛋白的配比依次为:1μg TYR-gRNA1:1μg TYR-gRNA2:2μg TYR-E1mut-ss126:4μg NCN蛋白。The ratios of TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and NCN protein were as follows: 1 μg TYR-gRNA1: 1 μg TYR-gRNA2: 2 μg TYR-E1mut-ss126: 4 μg NCN protein.
猪细胞、TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和NCN蛋白的配比依次为:10万个猪细胞:0.8-1.2μg TYR-gRNA1:0.8-1.2μg TYR-gRNA2:1.8-2.2μg TYR-E1mut-ss126:3-5μg NCN蛋白。The ratios of pig cells, TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and NCN protein were as follows: 100,000 pig cells: 0.8-1.2μg TYR-gRNA1: 0.8-1.2μg TYR-gRNA2: 1.8-2.2 μg TYR-E1mut-ss126: 3-5 μg NCN protein.
猪细胞、TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和NCN蛋白的配比依次为:10万个猪细胞:1μg TYR-gRNA1:1μg TYR-gRNA2:2μg TYR-E1mut-ss126:4μg NCN蛋白。The ratio of porcine cells, TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and NCN protein was as follows: 100,000 porcine cells: 1 μg TYR-gRNA1: 1 μg TYR-gRNA2: 2 μg TYR-E1mut-ss126: 4 μg NCN protein.
以上任一所述TYR-gRNA1为sgRNA,其靶序列结合区如SEQ ID NO:16中第3-22位核苷酸所示。Any of the above TYR-gRNA1 is sgRNA, and its target sequence binding region is shown in nucleotides 3-22 in SEQ ID NO: 16.
以上任一所述TYR-gRNA2为sgRNA,其靶序列结合区如SEQ ID NO:17中第3-22位核苷酸所示。Any of the above TYR-gRNA2s are sgRNAs, and the target sequence binding region thereof is shown in nucleotides 3-22 in SEQ ID NO: 17.
以上任一所述TYR-E1mut-ss126为SEQ ID NO:18所示的单链DNA分子。Any of the above TYR-E1mut-ss126 is a single-stranded DNA molecule shown in SEQ ID NO: 18.
以上任一所述NCN蛋白为Cas9蛋白或具有Cas9蛋白的融合蛋白。Any of the above NCN proteins are Cas9 proteins or fusion proteins with Cas9 proteins.
具体的,所述NCN蛋白如SEQ ID NO:3所示。Specifically, the NCN protein is shown in SEQ ID NO:3.
具体的,所述TYR-gRNA1如SEQ ID NO:16所示。Specifically, the TYR-gRNA1 is shown in SEQ ID NO: 16.
具体的,所述TYR-gRNA2如SEQ ID NO:17所示。Specifically, the TYR-gRNA2 is shown in SEQ ID NO: 17.
具体的,所述TYR-gRNA1如SEQ ID NO:10所示。Specifically, the TYR-gRNA1 is shown in SEQ ID NO: 10.
具体的,所述TYR-gRNA2如SEQ ID NO:11所示。Specifically, the TYR-gRNA2 is shown in SEQ ID NO: 11.
以上任一所述猪细胞为猪成纤维细胞。Any of the above-mentioned porcine cells are porcine fibroblasts.
以上任一所述猪细胞为猪原代成纤维细胞。Any of the above-mentioned porcine cells are porcine primary fibroblasts.
所述NCN蛋白的制备方法包括如下步骤:The preparation method of the NCN protein comprises the following steps:
(1)将质粒pKG-GE4导入大肠杆菌BL21(DE3),得到重组菌;(1) The plasmid pKG-GE4 was introduced into Escherichia coli BL21 (DE3) to obtain recombinant bacteria;
(2)采用液体培养基30℃培养所述重组菌,然后加入IPTG并进行25℃诱导培养,然后收集菌体;(2) using liquid medium to cultivate the recombinant bacteria at 30°C, then adding IPTG and performing induction culture at 25°C, and then collecting the bacterial cells;
(3)将收集的菌体进行菌体破碎,收集粗蛋白溶液;(3) thalline fragmentation is carried out by the collected thalline, and crude protein solution is collected;
(4)采用亲和层析从所述粗蛋白溶液中纯化具有His6标签的融合蛋白;(4) using affinity chromatography to purify the fusion protein with the His 6 tag from the crude protein solution;
(5)采用具有His6标签的肠激酶酶切具有His6标签的融合蛋白,然后采用Ni-NTA树脂去除具有His6标签的蛋白,得到纯化的NCN蛋白;(5) using enterokinase with His 6 tag to digest the fusion protein with His 6 tag, and then using Ni-NTA resin to remove the protein with His 6 tag to obtain purified NCN protein;
质粒pKG-GE4中具有SEQ ID NO:1中第5209-9852位核苷酸所示的融合基因。Plasmid pKG-GE4 has the fusion gene shown in nucleotides 5209-9852 in SEQ ID NO:1.
所述NCN蛋白的制备方法具体包括如下步骤:The preparation method of the NCN protein specifically comprises the following steps:
(1)将质粒pKG-GE4导入大肠杆菌BL21(DE3),得到重组菌。(1) The plasmid pKG-GE4 was introduced into Escherichia coli BL21 (DE3) to obtain recombinant bacteria.
(2)将步骤(1)得到的重组菌接种至含氨苄青霉素的液体LB培养基,振荡培养;(2) the recombinant bacteria obtained in step (1) are inoculated into the liquid LB medium containing ampicillin, and shake cultured;
(3)将步骤(2)得到的菌液接种至液体LB培养基,30℃、230rpm振荡培养至OD600nm值=1.0,然后加入IPTG并使其在体系中的浓度为0.5mM,然后25℃、230rpm振荡培养12小时,然后离心收集菌体;(3) Inoculate the bacterial liquid obtained in step (2) into liquid LB medium, shake and cultivate at 30°C and 230rpm until OD 600nm value=1.0, then add IPTG to make the concentration in the system 0.5mM, then 25°C , 230rpm shaking culture for 12 hours, then centrifuged to collect bacterial cells;
(4)取步骤(3)得到的菌体,用PBS缓冲液洗涤;(4) take the thalline obtained in step (3), wash with PBS buffer;
(5)取步骤(4)得到的菌体,加入粗提缓冲液并悬浮菌体,然后进行菌体破碎,然后离心收集上清液,采用0.22μm孔径滤膜过滤,收集滤液;(5) taking the thalline obtained in step (4), adding a crude extraction buffer and suspending the thalline, then crushing the thalline, then collecting the supernatant by centrifugation, filtering with a 0.22 μm pore size filter, and collecting the filtrate;
(6)采用亲和层析从步骤(5)得到的滤液中纯化具有His6标签的融合蛋白(SEQ IDNO:2所示的融合蛋白);(6) using affinity chromatography to purify the fusion protein with His 6 tag (fusion protein shown in SEQ ID NO: 2) from the filtrate obtained in step (5);
(7)取步骤(6)收集的过柱后溶液,使用超滤管浓缩,然后用25mM Tris-HCl(pH8.0)稀释;(7) Take the post-column solution collected in step (6), concentrate using an ultrafiltration tube, and then dilute with 25mM Tris-HCl (pH8.0);
(8)将具有His6标签的重组牛肠激酶加入到步骤(7)得到的溶液中,酶切;(8) adding the recombinant bovine enterokinase with His 6 tag to the solution obtained in step (7), and cleaving with enzyme;
(9)将完成步骤(8)的溶液与Ni-NTA树脂混匀,孵育,然后离心收集上清液;(9) mixing the solution obtained in step (8) with Ni-NTA resin, incubating, and then centrifuging to collect the supernatant;
(10)取步骤(9)得到的上清液,使用超滤管浓缩,然后加入酶贮存液中,即为NCN蛋白溶液。(10) Take the supernatant obtained in step (9), concentrate using an ultrafiltration tube, and then add it to the enzyme storage solution, which is the NCN protein solution.
采用亲和层析从步骤(5)得到的滤液中纯化具有His6标签的融合蛋白的具体方法如下:The specific method for purifying the fusion protein with His 6 tag from the filtrate obtained in step (5) by affinity chromatography is as follows:
首先采用5个柱体积的平衡液平衡Ni-NTA琼脂糖柱(流速为1ml/min);然后上样50ml步骤(5)得到的滤液(流速为0.5-1ml/min);然后用5个柱体积的平衡液洗涤柱子(流速为1ml/min);然后用5个柱体积的缓冲液洗涤柱子(流速为1ml/min),以去除杂蛋白;然后用10个柱体积的洗脱液以0.5-1ml/min的流速洗脱,收集过柱后溶液(90-100ml)。First equilibrate the Ni-NTA agarose column with 5 column volumes of equilibration solution (flow rate of 1ml/min); then load 50ml of the filtrate obtained in step (5) (flow rate of 0.5-1ml/min); then use 5 columns The column was washed with a volume of equilibration solution (flow rate of 1 ml/min); then the column was washed with 5 column volumes of buffer (flow rate of 1 ml/min) to remove impurities; Elute at a flow rate of -1 ml/min and collect the post-column solution (90-100 ml).
以上任一所述PRONCN蛋白自上游至下游依次包括如下元件:信号肽、分子伴侣蛋白、蛋白标签、蛋白酶酶切位点、核定位信号、Cas9蛋白、核定位信号。Any of the above PRONCN proteins include the following elements in sequence from upstream to downstream: a signal peptide, a molecular chaperone protein, a protein tag, a protease cleavage site, a nuclear localization signal, a Cas9 protein, and a nuclear localization signal.
所述信号肽的功能为促进蛋白分泌表达。所述信号肽可选自大肠杆菌碱性磷酸酶(phoA)信号肽、金黄色葡萄球菌蛋白A信号肽、大肠杆菌外膜蛋白(ompa)信号肽或任何其他原核基因的信号肽,优选为碱性磷酸酶信号肽(phoA signal peptide)。碱性磷酸酶信号肽用来引导目的蛋白分泌表达至细菌周质腔中,从而与细菌胞内蛋白分离,且分泌到细菌周质腔中的目的蛋白为可溶性表达,可被细菌周质腔中的信号肽酶裂解。The function of the signal peptide is to promote protein secretion and expression. The signal peptide can be selected from Escherichia coli alkaline phosphatase (phoA) signal peptide, Staphylococcus aureus protein A signal peptide, Escherichia coli outer membrane protein (ompa) signal peptide or signal peptide of any other prokaryotic gene, preferably base phoA signal peptide. The alkaline phosphatase signal peptide is used to guide the secretion and expression of the target protein into the bacterial periplasmic cavity, so as to be separated from the bacterial intracellular protein, and the target protein secreted into the bacterial periplasmic cavity is soluble and can be expressed in the bacterial periplasmic cavity. signal peptidase cleavage.
所述分子伴侣蛋白的功能为增加蛋白的可溶性。所述分子伴侣可为任何帮助形成二硫键的蛋白,优选为硫氧还原蛋白(TrxA蛋白)。硫氧还原蛋白,其能作为分子伴侣帮助所共表达的目的蛋白(例如Cas9蛋白)形成二硫键,提高蛋白的稳定性、折叠的正确性,增加目的蛋白的溶解性及活性。The function of the molecular chaperone protein is to increase the solubility of the protein. The molecular chaperone can be any protein that aids in the formation of disulfide bonds, preferably thioredoxin (TrxA protein). Thioreoxin, which can act as a molecular chaperone to help co-expressed target proteins (such as Cas9 proteins) form disulfide bonds, improve protein stability, correct folding, and increase the solubility and activity of target proteins.
所述蛋白标签的功能为用于蛋白纯化。所述标签可为His标签(His-Tag,His6蛋白标签)、GST标签、Flag标签、HA标签、c-Myc标签或其他任何蛋白标签,进一步优选为His标签。His标签能与Ni柱结合,可以通过一步法Ni柱亲和层析纯化目的蛋白,可极大地简化目的蛋白的纯化流程。The function of the protein tag is for protein purification. The tag can be a His tag (His-Tag, His 6 protein tag), GST tag, Flag tag, HA tag, c-Myc tag or any other protein tag, more preferably a His tag. The His tag can be combined with the Ni column, and the target protein can be purified by one-step Ni column affinity chromatography, which can greatly simplify the purification process of the target protein.
所述蛋白酶酶切位点的功能为纯化后用于切除非功能区段,以释放天然形式Cas9蛋白。所述蛋白酶可选自肠激酶(Enterokinase)、因子Xa(Factor Xa)、凝血酶(Thrombin)、TEV蛋白酶(TEV protease)、HRV 3C蛋白酶(HRV 3C protease)、WELQut蛋白酶或任何其他内切蛋白酶,进一步优选为肠激酶。EK为肠激酶酶切位点,便于使用肠激酶切除所融合的TrxA-His区段,得到天然形式的Cas9蛋白。本申请使用带His标签的商品肠激酶酶切融合蛋白后,可通过一次亲和层析除去TrxA-His区段及带His标签的肠激酶,得到天然形式的Cas9蛋白,避免了多次纯化透析对目的蛋白的伤害和损耗。The function of the protease cleavage site is to excise the non-functional segment after purification to release the Cas9 protein in its native form. The protease may be selected from Enterokinase, Factor Xa, Thrombin, TEV protease, HRV 3C protease, WELQut protease or any other endoprotease, More preferred is enterokinase. EK is an enterokinase cleavage site, which facilitates the use of enterokinase to excise the fused TrxA-His segment to obtain the natural form of the Cas9 protein. In this application, after the fusion protein is digested with the commercial enterokinase with His tag, the TrxA-His segment and the enterokinase with the His tag can be removed by one affinity chromatography to obtain the natural form of Cas9 protein, which avoids multiple purification and dialysis Damage and loss of target protein.
所述核定位信号可为任何核定位信号,优选为SV40核定位信号和/或nucleoplasmin核定位信号。NLS为核定位信号,在Cas9的N端及C端分别设计了一个NLS位点,使Cas9能更有效地进入细胞核进行基因编辑。The nuclear localization signal may be any nuclear localization signal, preferably the SV40 nuclear localization signal and/or the nucleoplasmin nuclear localization signal. NLS is a nuclear localization signal, and an NLS site is designed at the N-terminal and C-terminal of Cas9, so that Cas9 can enter the nucleus more efficiently for gene editing.
所述Cas9蛋白可为saCas9或spCas9,优选为spCas9蛋白。The Cas9 protein can be saCas9 or spCas9, preferably spCas9 protein.
PRONCN蛋白具体如SEQ ID NO:2所示。The PRONCN protein is specifically shown in SEQ ID NO:2.
以上任一所述特异质粒自上游至下游依次包括如下元件:启动子、操纵子、核糖体结合位点、PRONCN蛋白的编码基因、终止子。Any of the above-mentioned specific plasmids sequentially include the following elements from upstream to downstream: promoter, operator, ribosome binding site, gene encoding PRONCN protein, and terminator.
所述启动子具体可为T7启动子。T7启动子为原核表达强启动子,能高效驱动外源基因的表达。Specifically, the promoter can be a T7 promoter. The T7 promoter is a strong promoter for prokaryotic expression, which can efficiently drive the expression of foreign genes.
所述操纵子具体可为Lac操纵子。Lac操纵子为乳糖诱导表达的调控元件,可在细菌生长至一定数量后,再用IPTG在低温下诱导目的蛋白的表达,可避免目的蛋白过早表达对宿主菌生长的影响,低温下诱导表达也显著提高所表达的目的蛋白的可溶性。The operon can be specifically the Lac operon. The Lac operon is a regulatory element for lactose-induced expression. After the bacteria grow to a certain number, IPTG can be used to induce the expression of the target protein at low temperature, which can avoid the effect of premature expression of the target protein on the growth of the host bacteria, and induce expression at low temperature. Also significantly improves the solubility of the expressed protein of interest.
所述核糖体结合位点是蛋白翻译时的核糖体结合位点,对蛋白质的翻译是必要的。The ribosome binding site is a ribosome binding site during protein translation, and is necessary for protein translation.
所述终止子具体可为T7终止子。T7终止子可在目的基因的末端有效终止基因转录,避免目的基因之外的其他下游序列得到转录和翻译。The terminator can specifically be a T7 terminator. The T7 terminator can effectively terminate gene transcription at the end of the target gene, avoiding the transcription and translation of other downstream sequences other than the target gene.
对于spCas9蛋白的密码子,本申请对其密码子进行了优化,使之完全适应本申请所选用的大肠杆菌高效表达菌株E.coli BL21(DE3)的密码子偏好,从而提高Cas9蛋白的表达水平。For the codons of spCas9 protein, this application has optimized the codons to fully adapt to the codon preference of the E. coli high-efficiency expression strain E.coli BL21(DE3) selected in this application, thereby improving the expression level of Cas9 protein .
T7启动子如SEQ ID NO:1中第5121-5139位核苷酸所示。The T7 promoter is shown as nucleotides 5121-5139 in SEQ ID NO:1.
Lac操纵子如SEQ ID NO:1中第5140-5164位核苷酸所示。The Lac operon is shown as nucleotides 5140-5164 in SEQ ID NO:1.
核糖体结合位点如SEQ ID NO:1中第5178-5201位核苷酸所示。The ribosome binding site is shown as nucleotides 5178-5201 in SEQ ID NO:1.
碱性磷酸酶信号肽的编码序列如SEQ ID NO:1中第5209-5271位核苷酸所示。The coding sequence of the alkaline phosphatase signal peptide is shown in nucleotides 5209-5271 in SEQ ID NO:1.
TrxA蛋白的编码序列如SEQ ID NO:1中第5272-5598位核苷酸所示。The coding sequence of TrxA protein is shown in nucleotides 5272-5598 in SEQ ID NO:1.
His-Tag的编码序列如SEQ ID NO:1中第5620-5637位核苷酸所示。The coding sequence of His-Tag is shown in nucleotides 5620-5637 in SEQ ID NO:1.
肠激酶酶切位点的编码序列如SEQ ID NO:1中第5638-5652位核苷酸所示。The coding sequence of the enterokinase cleavage site is shown in nucleotides 5638-5652 in SEQ ID NO:1.
核定位信号的编码序列如SEQ ID NO:1中第5656-5670位核苷酸所示。The coding sequence for the nuclear localization signal is shown in SEQ ID NO:1 at nucleotides 5656-5670.
spCas9蛋白的编码序列如SEQ ID NO:1中第5701-9801位核苷酸所示。The coding sequence of spCas9 protein is shown in nucleotides 5701-9801 in SEQ ID NO:1.
核定位信号的编码序列如SEQ ID NO:1中第9802-9849位核苷酸所示。The coding sequence for the nuclear localization signal is shown at nucleotides 9802-9849 in SEQ ID NO:1.
T7终止子如SEQ ID NO:1中第9902-9949位核苷酸。The T7 terminator is nucleotides 9902-9949 in SEQ ID NO:1.
具体的,所述特异质粒为质粒pKG-GE4。Specifically, the specific plasmid is plasmid pKG-GE4.
质粒pKG-GE4中具有SEQ ID NO:1中第5121-9949位核苷酸所示的DNA分子。Plasmid pKG-GE4 has a DNA molecule represented by nucleotides 5121-9949 in SEQ ID NO:1.
具体的,以上任一所述质粒pKG-GE4如SEQ ID NO:1所示。Specifically, any of the above-mentioned plasmid pKG-GE4 is shown in SEQ ID NO: 1.
本发明还保护以上任一所述方法制备得到的重组细胞。The present invention also protects the recombinant cells prepared by any of the above methods.
本发明还保护所述重组细胞在制备白化病模型猪中的应用。The invention also protects the application of the recombinant cells in the preparation of albinism model pigs.
将所述重组细胞作为核移植供体细胞进行体细胞克隆,可以得到克隆猪,即为白化病模型猪。The recombinant cells are used as donor cells for nuclear transplantation to carry out somatic cell cloning, and a cloned pig can be obtained, that is, an albino model pig.
本发明还保护利用所述重组细胞制备的模型猪的猪组织,即白化病组织模型。The present invention also protects the porcine tissue of the model pig prepared by using the recombinant cell, that is, the albinism tissue model.
本发明还保护利用所述重组细胞制备的模型猪的猪器官,即白化病器官模型。The present invention also protects the pig organ of the model pig prepared by using the recombinant cell, that is, the albinism organ model.
本发明还保护利用所述重组细胞制备的模型猪的猪细胞,即白化病细胞模型。The present invention also protects the pig cells of the model pig prepared by using the recombinant cells, that is, the albinism cell model.
本发明还保护所述重组细胞、所述白化病组织模型、所述白化病器官模型、所述白化病细胞模型或者所述白化病模型猪的应用,为如下(d1)或(d2)或(d3)或(d4):The present invention also protects the application of the recombinant cells, the albinism tissue model, the albinism organ model, the albinism cell model or the albinism model pig, as follows (d1) or (d2) or (d3) or ( d4):
(d1)筛选治疗白化病的药物;(d1) Screening drugs for the treatment of albinism;
(d2)进行白化病药物的药效评价;(d2) Evaluating the efficacy of albinism drugs;
(d3)进行白化病的基因治疗和/或细胞治疗的疗效评价;(d3) Efficacy evaluation of gene therapy and/or cell therapy for albinism;
(d4)研究白化病的发病机制。(d4) To study the pathogenesis of albinism.
以上任一所述猪具体可为从江香猪。Any of the pigs mentioned above may specifically be Congjiangxiang pigs.
以上任一所述白化病可为OCA-1型白化病。Any of the above-mentioned albinisms may be OCA-1 albinism.
以上任一所述白化病可为OCA-1A型白化病。Any of the albinisms described above may be OCA-1A albinism.
OCA-1A型白化病是由TYR基因的如下突变引起的:TYR基因的R77L突变。OCA-1A albinism is caused by the following mutations in the TYR gene: R77L mutation of the TYR gene.
猪TYR基因信息:编码酪氨酸酶;位于9号染色体;GeneID为407745,Sus scrofa。猪TYR基因编码的氨基酸序列如SEQ ID NO:8所示。猪TYR基因具有SEQ ID NO:9所示的DNA区段。Pig TYR gene information: encodes tyrosinase; located on
与现有技术相比,本发明至少具有如下有益效果:Compared with the prior art, the present invention at least has the following beneficial effects:
(1)本发明研究对象(猪)比其他动物(大小鼠、灵长类)具有更好的应用性。(1) The research object (pig) of the present invention has better applicability than other animals (mice, primates).
大小鼠等啮齿类动物不论从体型、器官大小、生理、病理等方面都与人相差巨大,无法真实地模拟人类正常的生理、病理状态。研究表明,95%以上在大小鼠中验证有效的药物在人类临床试验中是无效的。就大动物而言,灵长类是与人亲缘关系最近的动物,但其体型小、性成熟晚(6-7岁开始交配),且为单胎动物,群体扩繁速度极慢,饲养成本很高。另外,灵长类动物克隆效率低、难度大、成本高。Rodents such as rats and mice are very different from humans in terms of body size, organ size, physiology, and pathology, and cannot truly simulate the normal physiological and pathological states of humans. Studies have shown that more than 95% of drugs proven to be effective in rats and mice are ineffective in human clinical trials. As far as large animals are concerned, primates are the closest relatives to humans, but they are small in size, late in sexual maturity (mating at the age of 6-7), and are singleton animals. very high. In addition, primate cloning is inefficient, difficult and costly.
而猪作为模型动物就没有上述缺点,猪是除灵长类外与人亲缘关系最近的动物,其体型、体重、器官大小等与人相近,在解剖学、生理学、免疫学、营养代谢、疾病发病机制等方面与人类极为相似。同时,猪的性成熟早(4-6个月),繁殖力高,一胎多仔,在2-3年内即可形成一个较大群体。另外,猪的克隆技术非常成熟,克隆及饲养成本也较灵长类低得多。因此猪是非常适合作为人类疾病模型的动物。As a model animal, pigs do not have the above shortcomings. Pigs are the closest animals to humans except primates. Their body size, body weight, organ size, etc. are similar to those of humans. Pathogenesis and other aspects are very similar to humans. At the same time, pigs have early sexual maturity (4-6 months), high fecundity, and multiple litter, which can form a larger group within 2-3 years. In addition, the cloning technology of pigs is very mature, and the cost of cloning and feeding is much lower than that of primates. Pigs are therefore very suitable animals as models of human disease.
(2)发明所构建的载体,使用了能够高效表达目的蛋白的强启动子T7-lac来进行目的蛋白的表达,用细菌周质蛋白碱性磷酸酶(phoA)的信号肽来引导目的蛋白分泌表达至细菌周质腔中,从而与细菌胞内蛋白分离,且分泌到细菌周质腔中的目的蛋白为可溶性表达。同时还采用硫氧还原蛋白TrxA与Cas9蛋白融合表达,TrxA能帮助所共表达的目的蛋白形成二硫键,提高蛋白的稳定性、折叠的正确性,增加目的蛋白的溶解性及活性。为了方便目的蛋白的纯化,设计了His标签,可以通过一步法Ni柱亲和层析纯化目的蛋白,极大地简化了目的蛋白的纯化流程。同时在His标签后设计了一个肠激酶酶切位点,便于切除所融合的TrxA-His多肽片段,得到天然形式的Cas9蛋白。利用带His标签的肠激酶酶切融合蛋白后,可通过一次亲和层析除去TrxA-His多肽片段及带His标签的肠激酶,得到天然形式的Cas9蛋白,避免了多次纯化透析对目的蛋白的伤害和损耗。同时,本发明也在Cas9的N端及C端分别设计了一个NLS位点,使Cas9能更有效地进入细胞核进行基因编辑。另外,本发明选择了E.coli BL21(DE3)菌株为目的蛋白表达菌株,该菌株可高效表达克隆于含有噬菌体T7启动子的表达载体(如pET-32a)的外源基因。同时,对于Cas9蛋白的密码子,本发明进行了密码子优化,使之完全适应表达菌株的密码子偏好,从而提高目的蛋白的表达水平。另外,本发明在细菌生长至一定数量后,再用IPTG在低温下诱导目的蛋白的表达,可避免目的蛋白过早表达对宿主菌生长的影响,低温下诱导表达也显著提高所表达的目的蛋白的可溶性。经过上述各项优化设计及实验实施,所得到的Cas9蛋白活性比商品Cas9蛋白有了极显著的提高。(2) The vector constructed by the invention uses a strong promoter T7-lac that can efficiently express the target protein to express the target protein, and uses the signal peptide of bacterial periplasmic protein alkaline phosphatase (phoA) to guide the secretion of the target protein It is expressed in the periplasmic cavity of bacteria, so as to be separated from bacterial intracellular proteins, and the target protein secreted into the periplasmic cavity of bacteria is soluble expression. At the same time, the thioredox protein TrxA and Cas9 protein are also used for fusion expression. TrxA can help the co-expressed target protein to form disulfide bonds, improve the stability of the protein, the correctness of folding, and increase the solubility and activity of the target protein. In order to facilitate the purification of the target protein, a His tag is designed, and the target protein can be purified by one-step Ni column affinity chromatography, which greatly simplifies the purification process of the target protein. At the same time, an enterokinase cleavage site was designed after the His tag to facilitate the excision of the fused TrxA-His polypeptide fragment to obtain the natural form of Cas9 protein. After the fusion protein is digested with His-tagged enterokinase, the TrxA-His polypeptide fragment and His-tagged enterokinase can be removed by one affinity chromatography to obtain the natural Cas9 protein, which avoids multiple purification and dialysis of the target protein. damage and loss. At the same time, the present invention also designs an NLS site at the N-terminus and C-terminus of Cas9, so that Cas9 can more effectively enter the nucleus for gene editing. In addition, the present invention selects E. coli BL21 (DE3) strain as the target protein expression strain, which can efficiently express the exogenous gene cloned in the expression vector (eg pET-32a) containing the phage T7 promoter. At the same time, for the codon of Cas9 protein, the present invention carries out codon optimization to make it completely adapt to the codon preference of the expression strain, thereby improving the expression level of the target protein. In addition, the present invention uses IPTG to induce the expression of the target protein at low temperature after the bacteria grows to a certain number, which can avoid the influence of the premature expression of the target protein on the growth of the host bacteria, and the induced expression at low temperature also significantly improves the expressed target protein. the solubility. After the above optimization design and experimental implementation, the activity of the obtained Cas9 protein has been significantly improved compared with the commercial Cas9 protein.
(3)采用本发明构建并表达的Cas9高效蛋白联合体外转录的gRNA进行基因编辑,并对Cas9和gRNA的最佳用量配比进行了优化,配合合成的ssODN作为Donor DNA,最终获得靶标位点点突变的单细胞克隆比率高达18.75%,远高于常规的点突变效率(<5%)。(3) The Cas9 high-efficiency protein constructed and expressed in the present invention is used in combination with gRNA transcribed in vitro to perform gene editing, and the optimal dosage ratio of Cas9 and gRNA is optimized, and the synthesized ssODN is used as Donor DNA to finally obtain the target site. The mutated single-cell clone ratio is as high as 18.75%, which is much higher than the conventional point mutation efficiency (<5%).
(4)利用本发明所得到的靶基因点突变单细胞克隆株进行体细胞核移植动物克隆可直接得到含靶位点突变的克隆猪,并且该突变可稳定遗传。(4) The cloned pigs containing the target site mutation can be directly obtained by using the target gene point mutation single-cell clone obtained by the present invention to carry out somatic cell nuclear transplantation animal cloning, and the mutation can be stably inherited.
在小鼠模型制作中采用的受精卵显微注射基因编辑材料后再进行胚胎移植的方法,因其直接获得点突变后代的概率非常低(低于1%),需要进行后代的杂交选育,这不太适用于妊娠期较长的大动物(如猪)模型制作。因此,本发明采用技术难度大、挑战性高的原代细胞体外编辑以及ssODN同源重组并筛选阳性编辑单细胞克隆的方法,后期再通过体细胞核移植动物克隆技术直接获得相应疾病模型猪,可大大缩短模型猪制作周期并节省人力、物力、财力。The method of microinjecting gene editing materials into fertilized eggs and then carrying out embryo transfer in the production of mouse models has a very low probability of directly obtaining point mutation offspring (less than 1%), which requires cross breeding of offspring. This is less suitable for modeling large animals (such as pigs) with longer gestation periods. Therefore, the present invention adopts the method of in vitro editing of primary cells and ssODN homologous recombination and screening positive editing single cell clones, which are technically difficult and challenging, and then directly obtains the corresponding disease model pigs through somatic cell nuclear transplantation animal cloning technology in the later stage. Greatly shorten the model pig production cycle and save manpower, material resources and financial resources.
本发明采用CRISPR/Cas9技术联合ssODN同源重组技术进行了TYR基因的定点突变,模拟OCA-1A型白化病的自然发病遗传特征,并获得了TYR基因点突变的单细胞克隆,为后期通过体细胞核移植动物克隆技术培育OCA-1A型白化病疾病模型猪奠定了基础。该模型猪将为研究OCA-1A型白化病的发病机制及药物研发提供有力的实验工具。The invention adopts CRISPR/Cas9 technology combined with ssODN homologous recombination technology to carry out site-directed mutation of TYR gene, simulates the natural pathogenic genetic characteristics of OCA-1A albinism, and obtains a single-cell clone with point mutation of TYR gene, which is used for the later passage of somatic cell nucleus. The transplanted animal cloning technology has laid the foundation for cultivating OCA-1A albinism model pigs. The model pig will provide a powerful experimental tool for studying the pathogenesis of OCA-1A albinism and drug development.
本发明为通过基因编辑手段获得TYR基因点突变的OCA-1A型白化病模型猪奠定了坚实的基础,将有助于研究并揭示TYR基因点突变导致OCA-1A型白化病的发病机制,也可用于进行药物筛选、药效检测、基因治疗及细胞治疗等研究,能够为进一步的临床应用提供有效的实验数据,进而为成功治疗人类OCA-1A型白化病提供有力的实验手段。本发明对于研发OCA-1A型白化病药物的研发及揭示该病的发病机制具有重大应用价值。The invention lays a solid foundation for obtaining OCA-1A albinism model pigs with TYR gene point mutation through gene editing, and will help to study and reveal the pathogenesis of OCA-1A albinism caused by TYR gene point mutation, and can also be used for Researches on drug screening, drug efficacy testing, gene therapy and cell therapy can provide effective experimental data for further clinical application, and then provide a powerful experimental method for the successful treatment of human OCA-1A albinism. The invention has great application value for the research and development of OCA-1A albinism drugs and for revealing the pathogenesis of the disease.
附图说明Description of drawings
图1为质粒pET-32a的结构示意图。Figure 1 is a schematic diagram of the structure of plasmid pET-32a.
图2为质粒pKG-GE4的结构示意图。Figure 2 is a schematic diagram of the structure of plasmid pKG-GE4.
图3为实施例3中gRNA与NCN蛋白用量配比优化的电泳图。FIG. 3 is an electropherogram showing the optimized dosage ratio of gRNA and NCN protein in Example 3. FIG.
图4为实施例3中NCN蛋白与商品Cas9蛋白的基因编辑效率比较的电泳图。FIG. 4 is an electropherogram comparing the gene editing efficiency of NCN protein and commercial Cas9 protein in Example 3. FIG.
图5为实施例4中用命名为1的猪的耳组织提取基因组作为模板采用不同引物对进行PCR扩增的电泳图。FIG. 5 is an electropherogram of PCR amplification with different primer pairs using the genome extracted from the ear tissue of pig named 1 as a template in Example 4. FIG.
图6为实施例4中分别以18只猪的基因组DNA为模板采用TYR-E1-JDF70和TYR-E1-JDR511组成的引物对进行PCR扩增的电泳图。FIG. 6 is an electrophoresis image of PCR amplification using the genomic DNAs of 18 pigs as templates and primer pairs consisting of TYR-E1-JDF70 and TYR-E1-JDR511 in Example 4, respectively.
图7为实施例4中不同靶点的编辑效率比较的电泳图。FIG. 7 is an electropherogram comparing the editing efficiency of different targets in Example 4. FIG.
图8为实施例5中的电泳图。FIG. 8 is an electropherogram in Example 5. FIG.
图9为编号为12的单细胞克隆的正向和反向测序同时与靶标位点野生型序列的比对结果。Figure 9 shows the results of forward and reverse sequencing of the single-cell clone numbered 12 while aligning it with the wild-type sequence of the target site.
图10为编号为8的单细胞克隆的正向和反向测序同时与靶标位点野生型序列的比对结果。Figure 10 shows the results of forward and reverse sequencing of the single-cell clone numbered 8 while aligning it with the wild-type sequence of the target site.
图11为编号为46的单细胞克隆的正向和反向测序同时与靶标位点野生型序列的比对结果。Figure 11 shows the results of forward and reverse sequencing of the single-cell clone numbered 46 while aligning it with the wild-type sequence of the target site.
图12为编号为20的单细胞克隆的正向和反向测序同时与靶标位点野生型序列的比对结果。Figure 12 shows the results of forward and reverse sequencing of the single-cell clone numbered 20 while aligning it with the wild-type sequence of the target site.
图13为编号为9的单细胞克隆的正向和反向测序同时与靶标位点野生型序列的比对结果。Figure 13 shows the results of forward and reverse sequencing of single-cell clone numbered 9 while aligning it with the wild-type sequence of the target site.
图14为编号为2的单细胞克隆的正向和反向测序同时与靶标位点野生型序列的比对结果。Figure 14 shows the results of forward and reverse sequencing of the single-cell clone numbered 2 while aligning it with the wild-type sequence of the target site.
具体实施方式Detailed ways
下面结合具体实施方式对本发明进行进一步的详细描述,给出的实施例仅为了阐明本发明,而不是为了限制本发明的范围。以下提供的实施例可作为本技术领域普通技术人员进行进一步改进的指南,并不以任何方式构成对本发明的限制。The present invention will be further described in detail below with reference to the specific embodiments, and the given examples are only for illustrating the present invention, rather than for limiting the scope of the present invention. The examples provided below can serve as a guide for those of ordinary skill in the art to make further improvements, and are not intended to limit the present invention in any way.
下述实施例中的实验方法,如无特殊说明,均为常规方法,按照本领域内的文献所描述的技术或条件或者按照产品说明书进行。下述实施例中所用的材料、试剂等,如无特殊说明,均可从商业途径得到。实施例中构建的重组质粒,均已进行测序验证。商品Cas9-A蛋白为市售的效果好的Cas9蛋白。商品Cas9-B蛋白为市售的效果好的Cas9蛋白。完全培养液(%为体积比):15%胎牛血清(Gibco)+83%DMEM培养基(Gibco)+1%Penicillin-Streptomycin(Gibco)+1%HEPES(Solarbio)。细胞培养条件:37℃,5%CO2、5%O2的恒温培养箱。The experimental methods in the following examples, unless otherwise specified, are conventional methods, and are performed according to the techniques or conditions described in the literature in the field or according to the product specification. The materials, reagents, etc. used in the following examples can be obtained from commercial sources unless otherwise specified. The recombinant plasmids constructed in the examples have all been verified by sequencing. The commercial Cas9-A protein is a commercially available Cas9 protein with good effect. The commercial Cas9-B protein is a commercially available Cas9 protein with good effect. Complete medium (% is volume ratio): 15% fetal bovine serum (Gibco)+83% DMEM medium (Gibco)+1% Penicillin-Streptomycin (Gibco)+1% HEPES (Solarbio). Cell culture conditions: constant temperature incubator at 37°C, 5% CO 2 , 5% O 2 .
实施例中采用的猪原代成纤维细胞均是用初生从江香猪耳组织制备得到的。制备猪原代成纤维细胞的方法:①取猪耳组织0.5g,去除毛发及骨组织,然后用75%酒精浸泡30-40s,然后用含5%(体积比)Penicillin-Streptomycin(Gibco)的PBS缓冲液洗涤5次,然后用PBS缓冲液洗涤一次;②用剪刀将组织剪碎,采用5mL 0.1%胶原酶溶液(Sigma),37℃消化1h,然后500g离心5min,弃上清;③将沉淀用1mL完全培养液重悬,然后铺入含10mL完全培养液并已用0.2%明胶(VWR)封盘的直径为10cm的细胞培养皿中,培养至细胞长满皿底60%左右;④完成步骤③后,采用胰蛋白酶消化并收集细胞,然后重悬于完全培养液。用于进行后续电转实验。The porcine primary fibroblasts used in the examples were all prepared from the primary Congjiangxiang pig ear tissue. The method of preparing primary porcine fibroblasts: ① Take 0.5 g of pig ear tissue, remove hair and bone tissue, then soak in 75% alcohol for 30-40s, and then use PBS containing 5% (volume ratio) Penicillin-Streptomycin (Gibco) The buffer was washed 5 times, and then washed once with PBS buffer; ② The tissue was cut into pieces with scissors, digested with 5 mL of 0.1% collagenase solution (Sigma), digested at 37 °C for 1 h, and then centrifuged at 500 g for 5 min, and the supernatant was discarded; ③ The pellet was discarded. Resuspend with 1mL of complete culture medium, then spread it into a 10cm-diameter cell culture dish containing 10mL of complete culture medium and sealed with 0.2% gelatin (VWR), and culture until the cells cover about 60% of the bottom of the dish; ④Complete After
质粒pKG-GE3,为环形质粒,如专利申请202010084343.6中的SEQ ID NO:2所示。专利申请202010084343.6中的SEQ ID NO:2中,第395-680位核苷酸组成CMV增强子,第682-890位核苷酸组成EF1a启动子,第986-1006位核苷酸编码核定位信号(NLS),第1016-1036位核苷酸编码核定位信号(NLS),第1037-5161位核苷酸编码Cas9蛋白,第5162-5209位核苷酸编码核定位信号(NLS),第5219-5266位核苷酸编码核定位信号(NLS),第5276-5332位核苷酸编码自剪切多肽P2A(自剪切多肽P2A的氨基酸序列为“ATNFSLLKQAGDVEENPGP”,发生自剪切的断裂位置为C端开始第一个氨基酸残基和第二个氨基酸残基之间),第5333-6046位核苷酸编码EGFP蛋白,第6056-6109位核苷酸编码自裂解多肽T2A(自裂解多肽T2A的氨基酸序列为“EGRGSLLTCGDVEENPGP”,发生自裂解的断裂位置为C端开始第一个氨基酸残基和第二个氨基酸残基之间),第6110-6703位核苷酸编码Puromycin蛋白(简称Puro蛋白),第6722-7310位核苷酸组成WPRE序列元件,第7382-7615位核苷酸组成3’LTR序列元件,第7647-7871位核苷酸组成bGH poly(A)signal序列元件。专利申请202010084343.6中的SEQ ID NO:2中,第911-6706位核苷酸形成融合基因,表达融合蛋白。由于自剪切多肽P2A和自裂解多肽T2A的存在,融合蛋白自发形成如下三个蛋白:具有Cas9蛋白的蛋白、具有EGFP蛋白的蛋白和具有Puro蛋白的蛋白。The plasmid pKG-GE3 is a circular plasmid, as shown in SEQ ID NO: 2 in the patent application 202010084343.6. In SEQ ID NO: 2 in patent application 202010084343.6, nucleotides 395-680 constitute the CMV enhancer, nucleotides 682-890 constitute the EF1a promoter, and nucleotides 986-1006 encode nuclear localization signals (NLS), nucleotides 1016-1036 encode the nuclear localization signal (NLS), nucleotides 1037-5161 encode the Cas9 protein, and nucleotides 5162-5209 encode the nuclear localization signal (NLS), 5219 -5266 nucleotides encode nuclear localization signal (NLS), 5276-5332 nucleotides encode self-cleaving polypeptide P2A (the amino acid sequence of self-cleaving polypeptide P2A is "ATNFSLLKQAGDVEENPGP", and the position of self-cleaving breakage is The C-terminal starts between the first amino acid residue and the second amino acid residue), the 5333-6046 nucleotides encode the EGFP protein, and the 6056-6109 nucleotides encode the self-cleaving polypeptide T2A (self-cleaving polypeptide T2A The amino acid sequence is "EGRGSLLTCGDVEENPGP", and the position of self-cleavage is between the first amino acid residue and the second amino acid residue from the C-terminus), and the 6110-6703 nucleotides encode Puromycin protein (referred to as Puro protein). ), the 6722-7310 nucleotides constitute the WPRE sequence element, the 7382-7615 nucleotides constitute the 3'LTR sequence element, and the 7647-7871 nucleotides constitute the bGH poly(A) signal sequence element. In SEQ ID NO: 2 in patent application 202010084343.6, nucleotides 911-6706 form a fusion gene and express a fusion protein. Due to the presence of the self-cleaving polypeptide P2A and the self-cleaving polypeptide T2A, the fusion protein spontaneously formed the following three proteins: a protein with Cas9 protein, a protein with EGFP protein, and a protein with Puro protein.
pKG-U6gRNA载体即质粒pKG-U6gRNA,为环形质粒,如专利申请202010084343.6中的SEQ ID NO:3所示。专利申请202010084343.6中的SEQ ID NO:3中,第2280-2539位核苷酸组成hU6启动子,第2558-2637位核苷酸用于转录形成gRNA骨架。使用时,将20bp左右的DNA分子(用于转录形成gRNA的靶序列结合区)插入质粒pKG-U6gRNA,形成重组质粒,在细胞中重组质粒转录得到gRNA。The pKG-U6 gRNA vector, the plasmid pKG-U6 gRNA, is a circular plasmid, as shown in SEQ ID NO: 3 in the patent application 202010084343.6. In SEQ ID NO: 3 in patent application 202010084343.6, the 2280-2539 nucleotides constitute the hU6 promoter, and the 2558-2637 nucleotides are used for transcription to form the gRNA backbone. When in use, a DNA molecule of about 20 bp (the target sequence binding region used for transcription to form gRNA) is inserted into the plasmid pKG-U6 gRNA to form a recombinant plasmid, and the recombinant plasmid is transcribed in cells to obtain gRNA.
实施例1、原核Cas9高效表达载体的构建Example 1. Construction of prokaryotic Cas9 high-efficiency expression vector
质粒pET-32a的结构示意图见图1。The schematic diagram of the structure of plasmid pET-32a is shown in Figure 1.
质粒pKG-GE4是以质粒pET-32a为出发质粒进行改造得到的。质粒pET32a-T7lac-phoA:SP-TrxA-His-EK-NLS-spCas9-NLS-T7ter(简称质粒pKG-GE4),如SEQ ID NO:1所示,为环形质粒,结构示意图见图2。The plasmid pKG-GE4 was obtained by transforming the plasmid pET-32a as the starting plasmid. Plasmid pET32a-T7lac-phoA:SP-TrxA-His-EK-NLS-spCas9-NLS-T7ter (referred to as plasmid pKG-GE4), as shown in SEQ ID NO: 1, is a circular plasmid, and the schematic diagram is shown in Figure 2.
SEQ ID NO:1中,第5121-5139位核苷酸组成T7启动子,第5140-5164位核苷酸编码Lac操纵子(lac operator),第5178-5201位核苷酸组成核糖体结合位点(RBS),第5209-5271位核苷酸编码碱性磷酸酶信号肽(phoA signal peptide),第5272-5598位核苷酸编码TrxA蛋白,第5620-5637位核苷酸编码His-Tag,第5638-5652位核苷酸编码肠激酶酶切位点(EK酶切位点),第5656-5670位核苷酸编码核定位信号,第5701-9801位核苷酸编码spCas9蛋白,第9802-9849位核苷酸编码核定位信号,第9902-9949位核苷酸组成T7终止子。编码spCas9蛋白的核苷酸已进行针对大肠杆菌BL21(DE3)菌株的密码子优化。In SEQ ID NO: 1, the 5121-5139 nucleotides constitute the T7 promoter, the 5140-5164 nucleotides encode the Lac operator, and the 5178-5201 nucleotides constitute the ribosome binding site Point (RBS), nucleotides 5209-5271 encode the alkaline phosphatase signal peptide (phoA signal peptide), nucleotides 5272-5598 encode the TrxA protein, and nucleotides 5620-5637 encode His-Tag , nucleotides 5638-5652 encode enterokinase cleavage site (EK cleavage site), nucleotides 5656-5670 encode nuclear localization signals, nucleotides 5701-9801 encode spCas9 protein, and Nucleotides 9802-9849 encode the nuclear localization signal, and nucleotides 9902-9949 constitute the T7 terminator. The nucleotides encoding the spCas9 protein have been codon-optimized for the E. coli BL21(DE3) strain.
质粒pKG-GE4的主要改造如下:①保留了TrxA蛋白的编码区域,TrxA蛋白可以帮助所表达的目的蛋白形成二硫键、增加目的蛋白的溶解性及活性;在TrxA蛋白的编码区域之前加入碱性磷酸酶信号肽的编码序列,碱性磷酸酶信号肽可以引导所表达的目的蛋白分泌至细菌的膜周质腔中并可被原核周质信号肽酶酶切;②在TrxA蛋白的编码序列之后增加His-Tag的编码序列,His-Tag可用于所表达的目的蛋白的富集;③在His-Tag的编码序列下游增加肠激酶酶切位点DDDDK(Asp-Asp-Asp-Asp-Lys)的编码序列,纯化出的蛋白将在肠激酶作用下去除His-Tag和上游所融合的TrxA蛋白;④插入密码子优化后的适宜大肠杆菌BL21(DE3)菌株表达的Cas9基因,同时在该基因的上游和下游均增加核定位信号编码序列,增加后期纯化出的Cas9蛋白的核定位能力。The main modifications of the plasmid pKG-GE4 are as follows: ① The coding region of the TrxA protein is retained, and the TrxA protein can help the expressed target protein to form disulfide bonds and increase the solubility and activity of the target protein; Add alkali before the coding region of the TrxA protein The coding sequence of sex phosphatase signal peptide, the alkaline phosphatase signal peptide can guide the expressed target protein to be secreted into the periplasmic cavity of bacteria and can be digested by prokaryotic periplasmic signal peptidase; ② in the coding sequence of TrxA protein After that, the coding sequence of His-Tag is added, and His-Tag can be used for the enrichment of the expressed target protein; ③ Add the enterokinase cleavage site DDDDK (Asp-Asp-Asp-Asp-Lys) downstream of the coding sequence of His-Tag ), the purified protein will remove His-Tag and the upstream fused TrxA protein under the action of enterokinase; Both the upstream and downstream of the gene increase the nuclear localization signal coding sequence to increase the nuclear localization ability of the later purified Cas9 protein.
质粒pKG-GE4中的融合基因如SEQ ID NO:1中第5209-9852位核苷酸所示,编码SEQID NO:2所示的融合蛋白(融合蛋白TrxA-His-EK-NLS-spCas9-NLS,简称为PRONCN蛋白)。由于碱性磷酸酶信号肽以及肠激酶酶切位点的存在,融合蛋白被肠激酶酶切后形成SEQ IDNO:3所示的蛋白质,将SEQ ID NO:3所示的蛋白质命名为NCN蛋白。The fusion gene in plasmid pKG-GE4 is shown in nucleotides 5209-9852 in SEQ ID NO: 1, encoding the fusion protein shown in SEQ ID NO: 2 (fusion protein TrxA-His-EK-NLS-spCas9-NLS , referred to as PRONCN protein). Due to the existence of the alkaline phosphatase signal peptide and enterokinase cleavage site, the fusion protein is digested by enterokinase to form the protein shown in SEQ ID NO: 3, and the protein shown in SEQ ID NO: 3 is named as NCN protein.
实施例2、NCN蛋白的制备和纯化Example 2. Preparation and purification of NCN protein
一、诱导表达1. Induced expression
1、将质粒pKG-GE4导入大肠杆菌BL21(DE3),得到重组菌。1. The plasmid pKG-GE4 was introduced into Escherichia coli BL21 (DE3) to obtain recombinant bacteria.
2、将步骤1得到的重组菌接种至含100μg/ml氨苄青霉素的液体LB培养基,37℃、200rpm振荡培养过夜。2. Inoculate the recombinant bacteria obtained in
3、将步骤2得到的菌液接种至液体LB培养基,30℃、230rpm振荡培养至OD600nm值=1.0,然后加入异丙基硫代半乳糖苷(IPTG)并使其在体系中的浓度为0.5mM,然后25℃、230rpm振荡培养12小时,然后4℃、10000g离心15分钟,收集菌体。3. Inoculate the bacterial liquid obtained in
4、取步骤3得到的菌体,用PBS缓冲液洗涤。4. Take the bacteria obtained in
二、融合蛋白TrxA-His-EK-NLS-spCas9-NLS的纯化2. Purification of fusion protein TrxA-His-EK-NLS-spCas9-NLS
1、取步骤一得到的菌体,加入粗提缓冲液并悬浮菌体,然后采用均质机进行菌体破碎(1000par循环三次),然后4℃、15000g离心30min,收集上清液,上清液采用0.22μm孔径滤膜过滤,收集滤液。本步骤中,每g湿重的菌体配比10ml粗提缓冲液。1. Take the cells obtained in
粗提缓冲液:含20mM Tris-HCl(pH8.0)、0.5M NaCl、5mM Imidazole、1mM PMSF,余量为ddH2O。Crude extraction buffer: containing 20 mM Tris-HCl (pH 8.0), 0.5 M NaCl, 5 mM Imidazole, 1 mM PMSF, the balance being ddH 2 O.
2、采用亲和层析纯化融合蛋白。2. Purify the fusion protein by affinity chromatography.
首先采用5个柱体积的平衡液平衡Ni-NTA琼脂糖柱(流速为1ml/min);然后上样50ml步骤1得到的滤液(流速为0.5-1ml/min);然后用5个柱体积的平衡液洗涤柱子(流速为1ml/min);然后用5个柱体积的缓冲液洗涤柱子(流速为1ml/min),以去除杂蛋白;然后用10个柱体积的洗脱液以0.5-1ml/min的流速洗脱,收集过柱后溶液(90-100ml)。First equilibrate the Ni-NTA agarose column with 5 column volumes of equilibration solution (flow rate of 1ml/min); then load 50ml of the filtrate obtained in step 1 (flow rate of 0.5-1ml/min); then use 5 column volumes of Wash the column with equilibration solution (flow rate of 1ml/min); then wash the column with 5 column volumes of buffer (flow rate of 1ml/min) to remove impurities; then use 10 column volumes of eluent at 0.5-1ml eluted at a flow rate of /min, and the post-column solution (90-100 ml) was collected.
Ni-NTA琼脂糖柱:金斯瑞,L00250/L00250-C,填料为10ml。Ni-NTA agarose column: GenScript, L00250/L00250-C, packing 10ml.
平衡液:含20mM Tris-HCl(pH 8.0)、0.5M NaCl、5mM Imidazole,余量为ddH2O。Equilibrium solution: containing 20 mM Tris-HCl (pH 8.0), 0.5 M NaCl, 5 mM Imidazole, the balance being ddH 2 O.
缓冲液:含20mM Tris-HCl(pH 8.0)、0.5M NaCl、50mM Imidazole,余量为ddH2O。Buffer: 20 mM Tris-HCl (pH 8.0), 0.5 M NaCl , 50 mM Imidazole, balance ddH2O.
洗脱液:含20mM Tris-HCl(pH 8.0)、0.5M NaCl、500mM Imidazole,余量为ddH2O。Eluent: 20 mM Tris-HCl (pH 8.0), 0.5 M NaCl, 500 mM Imidazole, balance ddH 2 O.
三、融合蛋白TrxA-His-EK-NLS-spCas9-NLS的酶切与NCN蛋白的纯化3. Enzyme cleavage of fusion protein TrxA-His-EK-NLS-spCas9-NLS and purification of NCN protein
1、取15ml步骤二收集的过柱后溶液,使用Amicon超滤管(Sigma,UFC9100,容量为15ml)将其浓缩至200μl,然后用25mM Tris-HCl(pH8.0)稀释至1ml。采用6个超滤管,共得到6ml。1. Take 15ml of the post-column solution collected in
2、将商品来源的具有His6标签的重组牛肠激酶(生工生物,C620031,重组牛肠激酶轻链,带His6标签,Recombinant Bovine Enterokinase Light Chain,His)加入到步骤1得到的溶液(约6ml)中,25℃酶切16小时。每50μg蛋白量配比加入2个单位的肠激酶。2. Add the recombinant bovine enterokinase with the His 6 tag of commercial origin (Sangon Bio, C620031, recombinant bovine enterokinase light chain, with the His 6 tag, Recombinant Bovine Enterokinase Light Chain, His) to the solution obtained in step 1 ( about 6 ml), digested at 25°C for 16 hours. Add 2 units of enterokinase per 50 μg of protein.
3、取完成步骤2的溶液(约6ml),与480μl Ni-NTA树脂(金斯瑞,L00250/L00250-C)混匀,在室温下旋转混匀15min,然后7000g离心3min,收集上清液(4-5.5ml)。3. Take the solution from step 2 (about 6ml), mix it with 480μl Ni-NTA resin (GenScript, L00250/L00250-C), rotate and mix at room temperature for 15min, then centrifuge at 7000g for 3min, collect the supernatant (4-5.5ml).
4、取步骤3得到的上清液,使用Amicon超滤管(Sigma,UFC9100,容量为15ml)将其浓缩至200μl,然后加入酶贮存液中,调整蛋白浓度为5mg/ml,即为NCN蛋白溶液。4. Take the supernatant obtained in
经测序,NCN蛋白溶液中的蛋白质,N端15个氨基酸残基如SEQ ID NO:3第1至15位所示,即NCN蛋白。After sequencing, the 15 N-terminal amino acid residues of the protein in the NCN protein solution are shown in
用于后续实施例的NCN蛋白均由NCN蛋白溶液提供。The NCN proteins used in subsequent examples were all provided by NCN protein solutions.
酶贮存液(pH7.4):含10mM Tris,300mM NaCl,0.1mM EDTA,1mM DTT,50%(体积比)甘油,余量为ddH2O。Enzyme stock solution (pH 7.4): containing 10 mM Tris, 300 mM NaCl, 0.1 mM EDTA, 1 mM DTT, 50% (v/v) glycerol, the balance being ddH 2 O.
实施例3、NCN蛋白的性能Example 3. Properties of NCN protein
选择靶向TTN基因的2个gRNA靶点如下:The 2 gRNA targets selected to target the TTN gene are as follows:
TTN-gRNA1:AGAGCACAGTCAGCCTGGCG;TTN-gRNA1:AGAGCACAGTCAGCCTGGCG;
TTN-gRNA2:CTTCCAGAATTGGATCTCCG。TTN-gRNA2: CTTCCAGAATTGGATCTCCG.
用于鉴定包含TTN基因中gRNA的靶点片段的引物如下:The primers used to identify the target fragment containing the gRNA in the TTN gene are as follows:
TTN-F55:TACGGAATTGGGGAGCCAGCGGA;TTN-F55: TACGGAATTGGGGAGCCAGCGGA;
TTN-R560:CAAAGTTAACTCTCTGTGTCT。TTN-R560: CAAAGTTAACTCTCTGTGTCT.
一、制备gRNA1. Preparation of gRNA
1、制备TTN-T7-gRNA1转录模板和TTN-T7-gRNA2转录模板1. Preparation of TTN-T7-gRNA1 transcription template and TTN-T7-gRNA2 transcription template
TTN-T7-gRNA1转录模板为双链DNA分子,如SEQ ID NO:4所示。The TTN-T7-gRNA1 transcription template is a double-stranded DNA molecule, as shown in SEQ ID NO:4.
TTN-T7-gRNA2转录模板为双链DNA分子,如SEQ ID NO:5所示。The TTN-T7-gRNA2 transcription template is a double-stranded DNA molecule, as shown in SEQ ID NO:5.
2、体外转录得到gRNA2. In vitro transcription to obtain gRNA
取TTN-T7-gRNA1转录模板,采用Transcript Aid T7 High Yield TranscriptionKit(Fermentas,K0441)进行体外转录,然后用MEGA clearTM Transcription Clean-Up Kit(Thermo,AM1908)进行回收纯化,得到TTN-gRNA1。TTN-gRNA1为单链RNA,如SEQ ID NO:6所示。The TTN-T7-gRNA1 transcription template was taken and transcribed in vitro with Transcript Aid T7 High Yield Transcription Kit (Fermentas, K0441), and then recovered and purified with MEGA clear TM Transcription Clean-Up Kit (Thermo, AM1908) to obtain TTN-gRNA1. TTN-gRNA1 is a single-stranded RNA, as shown in SEQ ID NO:6.
取TTN-T7-gRNA2转录模板,采用Transcript Aid T7 High Yield TranscriptionKit (Fermentas,K0441)进行体外转录,然后用MEGA clearTM Transcription Clean-UpKit(Thermo,AM1908)进行回收纯化,得到TTN-gRNA2。TTN-gRNA2为单链RNA,如SEQ ID NO:7所示。The TTN-T7-gRNA2 transcription template was taken and transcribed in vitro with Transcript Aid T7 High Yield Transcription Kit (Fermentas, K0441), and then recovered and purified with MEGA clear TM Transcription Clean-Up Kit (Thermo, AM1908) to obtain TTN-gRNA2. TTN-gRNA2 is a single-stranded RNA, as shown in SEQ ID NO:7.
二、gRNA与NCN蛋白用量配比优化2. Optimization of the dosage ratio of gRNA and NCN protein
1、共转染猪原代成纤维细胞1. Co-transfection of porcine primary fibroblasts
第一组:将TTN-gRNA1、TTN-gRNA2和NCN蛋白共转染猪原代成纤维细胞。配比:约10万个猪原代成纤维细胞:0.5μg TTN-gRNA1:0.5μg TTN-gRNA2:4μg NCN蛋白。Group 1: TTN-gRNA1, TTN-gRNA2 and NCN proteins were co-transfected into porcine primary fibroblasts. Ratio: about 100,000 porcine primary fibroblasts: 0.5 μg TTN-gRNA1: 0.5 μg TTN-gRNA2: 4 μg NCN protein.
第二组:将TTN-gRNA1、TTN-gRNA2和NCN蛋白共转染猪原代成纤维细胞。配比:约10万个猪原代成纤维细胞:0.75μg TTN-gRNA1:0.75μg TTN-gRNA2:4μg NCN蛋白。The second group: TTN-gRNA1, TTN-gRNA2 and NCN proteins were co-transfected into porcine primary fibroblasts. Ratio: about 100,000 porcine primary fibroblasts: 0.75 μg TTN-gRNA1: 0.75 μg TTN-gRNA2: 4 μg NCN protein.
第三组:将TTN-gRNA1、TTN-gRNA2和NCN蛋白共转染猪原代成纤维细胞。配比:约10万个猪原代成纤维细胞:1μg TTN-gRNA1:1μg TTN-gRNA2:4μg NCN蛋白。The third group: TTN-gRNA1, TTN-gRNA2 and NCN proteins were co-transfected into porcine primary fibroblasts. Ratio: about 100,000 porcine primary fibroblasts: 1 μg TTN-gRNA1: 1 μg TTN-gRNA2: 4 μg NCN protein.
第四组:将TTN-gRNA1、TTN-gRNA2和NCN蛋白共转染猪原代成纤维细胞。配比:约10万个猪原代成纤维细胞:1.25μg TTN-gRNA1:1.25μg TTN-gRNA2:4μg NCN蛋白。The fourth group: TTN-gRNA1, TTN-gRNA2 and NCN proteins were co-transfected into porcine primary fibroblasts. Ratio: about 100,000 porcine primary fibroblasts: 1.25 μg TTN-gRNA1: 1.25 μg TTN-gRNA2: 4 μg NCN protein.
第五组:将TTN-gRNA1和TTN-gRNA2共转染猪原代成纤维细胞。配比:约10万个猪原代成纤维细胞:1μg TTN-gRNA1:1μg TTN-gRNA2。Group 5: TTN-gRNA1 and TTN-gRNA2 were co-transfected into porcine primary fibroblasts. Ratio: about 100,000 porcine primary fibroblasts: 1 μg TTN-gRNA1: 1 μg TTN-gRNA2.
共转染采用电击转染的方式,采用哺乳动物核转染试剂盒(Neon kit,Thermofisher)与Neon TM transfection system电转仪(参数设置为:1450V、10ms、3pulse)。Co-transfection was performed by electroporation, using a mammalian nucleofection kit (Neon kit, Thermofisher) and a Neon TM transfection system electroporator (parameter settings: 1450V, 10ms, 3pulse).
2、完成步骤1后,采用完全培养液培养12-18小时,然后更换新的完全培养液进行培养。电转后培养总时间为48小时。2. After completing
3、完成步骤2后,采用胰蛋白酶消化并收集细胞,提取基因组DNA,采用TTN-F55和TTN-R560组成的引物对进行PCR扩增,然后进行1%琼脂糖凝胶电泳。3. After completing
电泳图见图3。505bp条带为野生型条带(WT),254bp左右(野生型条带505bp理论缺失251bp)为缺失突变条带(MT)。The electropherogram is shown in Figure 3. The 505bp band is the wild-type band (WT), and the 254bp or so (the 505bp theoretical deletion of the wild-type band is 251bp) is the deletion mutant band (MT).
基因缺失突变效率=(MT灰度/MT条带bp数)/(WT灰度/WT条带bp数+MT灰度/MT条带bp数)×100%。第一组基因缺失突变效率为19.9%,第二组基因缺失突变效率为39.9%,第三组基因缺失突变效率为79.9%,第四组基因缺失突变效率为44.3%。第五组未发生突变。Gene deletion mutation efficiency=(MT gray level/MT band bp number)/(WT gray level/WT band bp number+MT gray level/MT band bp number)×100%. The efficiency of gene deletion mutation of the first group was 19.9%, the efficiency of gene deletion mutation of the second group was 39.9%, the efficiency of gene deletion mutation of the third group was 79.9%, and the efficiency of gene deletion mutation of the fourth group was 44.3%. No mutation occurred in the fifth group.
结果表明,当两个gRNA与NCN蛋白的质量配比为1:1:4,实际用量为1μg:1μg:4μg时基因编辑效率最高。因此,确定两个gRNA与NCN蛋白的最适用量为1μg:1μg:4μg。The results showed that the gene editing efficiency was the highest when the mass ratio of the two gRNAs to NCN protein was 1:1:4, and the actual dosage was 1μg:1μg:4μg. Therefore, the most suitable amount of the two gRNAs and NCN protein was determined to be 1 μg: 1 μg: 4 μg.
三、NCN蛋白与商品Cas9蛋白的基因编辑效率比较3. Comparison of gene editing efficiency between NCN protein and commercial Cas9 protein
1、共转染猪原代成纤维细胞1. Co-transfection of porcine primary fibroblasts
Cas9-A组:将TTN-gRNA1、TTN-gRNA2和商品Cas9-A蛋白共转染猪原代成纤维细胞。配比:约10万个猪原代成纤维细胞:1μg TTN-gRNA1:1μg TTN-gRNA2:4μg Cas9-A蛋白。Cas9-A group: TTN-gRNA1, TTN-gRNA2 and commercial Cas9-A protein were co-transfected into porcine primary fibroblasts. Ratio: about 100,000 porcine primary fibroblasts: 1 μg TTN-gRNA1: 1 μg TTN-gRNA2: 4 μg Cas9-A protein.
pKG-GE4组:将TTN-gRNA1、TTN-gRNA2和NCN蛋白共转染猪原代成纤维细胞。配比:约10万个猪原代成纤维细胞:1μg TTN-gRNA1:1μg TTN-gRNA2:4μg NCN蛋白。pKG-GE4 group: TTN-gRNA1, TTN-gRNA2 and NCN proteins were co-transfected into porcine primary fibroblasts. Ratio: about 100,000 porcine primary fibroblasts: 1 μg TTN-gRNA1: 1 μg TTN-gRNA2: 4 μg NCN protein.
Cas9-B组:将TTN-gRNA1、TTN-gRNA2和商品Cas9-B蛋白共转染猪原代成纤维细胞。配比:约10万个猪原代成纤维细胞:1μg TTN-gRNA1:1μg TTN-gRNA2:4μg Cas9-B蛋白。Cas9-B group: TTN-gRNA1, TTN-gRNA2 and commercial Cas9-B protein were co-transfected into porcine primary fibroblasts. Ratio: about 100,000 porcine primary fibroblasts: 1 μg TTN-gRNA1: 1 μg TTN-gRNA2: 4 μg Cas9-B protein.
Control组:将TTN-gRNA1、TTN-gRNA2共转染猪原代成纤维细胞。配比:约10万个猪原代成纤维细胞:1μg TTN-gRNA1:1μg TTN-gRNA2。Control group: TTN-gRNA1 and TTN-gRNA2 were co-transfected into porcine primary fibroblasts. Ratio: about 100,000 porcine primary fibroblasts: 1 μg TTN-gRNA1: 1 μg TTN-gRNA2.
共转染采用电击转染的方式,采用哺乳动物核转染试剂盒(Neon kit,Thermofisher)与Neon TM transfection system电转仪(参数设置为:1450V、10ms、3pulse)。Co-transfection was performed by electroporation, using a mammalian nucleofection kit (Neon kit, Thermofisher) and a Neon TM transfection system electroporator (parameter settings: 1450V, 10ms, 3pulse).
2、完成步骤1后,采用完全培养液培养12-18小时,然后更换新的完全培养液进行培养。电转后培养总时间为48小时。2. After completing
3、完成步骤2后,采用胰蛋白酶消化并收集细胞,提取基因组DNA,采用TTN-F55和TTN-R560组成的引物对进行PCR扩增,然后进行1%琼脂糖凝胶电泳。3. After completing
电泳图见图4。采用商品Cas9-A蛋白的基因缺失突变效率为28.5%,采用NCN蛋白的基因缺失突变效率为85.6%,采用商品Cas9-B蛋白的基因缺失突变效率为16.6%。The electropherogram is shown in Figure 4. The gene deletion mutation efficiency using commercial Cas9-A protein was 28.5%, the gene deletion mutation efficiency using NCN protein was 85.6%, and the gene deletion mutation efficiency using commercial Cas9-B protein was 16.6%.
结果表明,与采用商品的Cas9蛋白相比,采用本发明制备的NCN蛋白使得基因编辑效率显著提高。The results show that, compared with the commercial Cas9 protein, the NCN protein prepared by the present invention significantly improves the gene editing efficiency.
实施例4、TYR基因高效gRNA靶点的筛选Example 4. Screening of high-efficiency gRNA targets of TYR gene
猪TYR基因信息:编码酪氨酸酶;位于9号染色体;GeneID为407745,Sus scrofa。猪TYR基因编码的氨基酸序列如SEQ ID NO:8所示。基因组DNA中,猪TYR基因具有5个外显子。人类OCA-1A相关的TYR基因点突变为R77L突变。R77L突变对应于猪TYR基因第1外显子。猪基因组DNA中,TYR基因部分序列(含第1外显子及其上游部分核苷酸)如SEQ ID NO:9所示。Pig TYR gene information: encodes tyrosinase; located on
一、TYR基因预设点突变位点及邻近基因组序列保守性分析1. Conservation analysis of TYR gene preset mutation sites and adjacent genome sequences
18只初生从江香猪,其中雌性10只(分别命名为1、2、3、4、5、6、7、8、9、10)、雄性8只(分别命名为A、B、C、D、E、F、G、H)。18 newborn Congjiangxiang pigs, including 10 females (named 1, 2, 3, 4, 5, 6, 7, 8, 9, 10) and 8 males (named A, B, C, D, E, F, G, H).
TYR-E1-JDF48:AGAATGCTCCTGGCTGCTTT;TYR-E1-JDF48:AGAATGCTCCTGGCTGCTTT;
TYR-E1-JDR511:CCTGTGGGGATGACGAAGTC;TYR-E1-JDR511: CCTGTGGGGATGACGAAGTC;
TYR-E1-JDF70:ACTGCCTGCTCTGGACTTTC;TYR-E1-JDF70:ACTGCCTGCTCCTGGACTTTC;
TYR-E1-JDR508:GTGGGGATGACGAAGTCTGG。TYR-E1-JDR508: GTGGGGATGACGAAGTCTGG.
用命名为1的猪的耳组织提取基因组作为模板,采用不同引物对进行PCR扩增,然后进行1%琼脂糖凝胶电泳。电泳图见图5。图5中:组1:采用TYR-E1-JDF48和TYR-E1-JDR511组成的引物对;组2:采用TYR-E1-JDF48和TYR-E1-JDR508组成的引物对;组3:采用TYR-E1-JDF70和TYR-E1-JDR511组成的引物对;组4:采用TYR-E1-JDF70和TYR-E1-JDR508组成的引物对。结果表明,优选采用TYR-E1-JDF70和TYR-E1-JDR511组成的引物对进行目的片段扩增。The genome was extracted from the ear tissue of pig named 1 as a template, PCR amplification was performed using different primer pairs, and then 1% agarose gel electrophoresis was performed. The electropherogram is shown in Figure 5. In Figure 5: Group 1: using primer pair composed of TYR-E1-JDF48 and TYR-E1-JDR511; Group 2: using primer pair composed of TYR-E1-JDF48 and TYR-E1-JDR508; Group 3: using TYR- A primer pair consisting of E1-JDF70 and TYR-E1-JDR511; group 4: a primer pair consisting of TYR-E1-JDF70 and TYR-E1-JDR508. The results showed that the primer pair composed of TYR-E1-JDF70 and TYR-E1-JDR511 was preferably used to amplify the target fragment.
分别以18只猪的基因组DNA为模板,采用TYR-E1-JDF70和TYR-E1-JDR511组成的引物对进行PCR扩增,然后进行1%琼脂糖凝胶电泳。电泳图见图6。回收PCR扩增产物并进行测序,将测序结果与公共数据库中的TYR基因序列进行比对分析。选择18只猪中共有的保守区进行gRNA靶点的设计。The genomic DNAs of 18 pigs were used as templates, and primer pairs consisting of TYR-E1-JDF70 and TYR-E1-JDR511 were used for PCR amplification, followed by 1% agarose gel electrophoresis. The electropherogram is shown in Figure 6. The PCR amplification products were recovered and sequenced, and the sequencing results were compared and analyzed with the TYR gene sequence in the public database. Conserved regions shared among 18 pigs were selected for the design of gRNA targets.
二、筛选靶点2. Screening targets
通过筛选NGG(避开可能的突变位点)初步筛选到若干靶点,经过预实验进一步从中筛选到4个靶点。Several targets were initially screened by screening NGG (avoiding possible mutation sites), and 4 targets were further screened through preliminary experiments.
4个靶点分别如下:The 4 targets are as follows:
TYR-E1-gRNA1:ACCTCAGTTCCCCTTCACCG;TYR-E1-gRNA1:ACCTCAGTTCCCCTTCACCG;
TYR-E1-gRNA2:GTCCTGTTGTAAAAGACGGA;TYR-E1-gRNA2: GTCCTGTTGTAAAAGACGGA;
TYR-E1-gRNA3:AGACTCCCGTTCATCCACCC;TYR-E1-gRNA3:AGACTCCCGTTCATCCACCC;
TYR-E1-gRNA4:GGTCCTGTTGTAAAAGACGG。TYR-E1-gRNA4: GGTCCTGTTGTAAAAGACGG.
三、制备重组质粒3. Preparation of recombinant plasmids
取质粒pKG-U6gRNA,用限制性内切酶BbsI进行酶切,回收载体骨架(约3kb的线性大片段)。The plasmid pKG-U6gRNA was taken, digested with the restriction enzyme BbsI, and the vector backbone (a linear large fragment of about 3 kb) was recovered.
分别合成TYR-E1-gRNA1-S和TYR-E1-gRNA1-A,然后混合并进行退火,得到具有粘性末端的双链DNA分子。将具有粘性末端的双链DNA分子和载体骨架连接,得到质粒pKG-U6gRNA(TYR-E1-gRNA1)。质粒pKG-U6gRNA(TYR-E1-gRNA1)表达SEQ ID NO:10所示的sgRNATYR-E1-gRNA1。sgRNATYR-E1-gRNA1(SEQ ID NO:10):TYR-E1-gRNA1-S and TYR-E1-gRNA1-A were synthesized separately, then mixed and annealed to obtain double-stranded DNA molecules with sticky ends. The double-stranded DNA molecules with cohesive ends and the vector backbone were ligated to obtain plasmid pKG-U6gRNA (TYR-E1-gRNA1). The plasmid pKG-U6 gRNA (TYR-E1-gRNA1) expresses the sgRNA TYR-E1-gRNA1 shown in SEQ ID NO: 10. sgRNA TYR-E1-gRNA1 (SEQ ID NO: 10):
ACCUCAGUUCCCCUUCACCGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu。ACCUCAGUUCCCCUUCACCGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu.
分别合成TYR-E1-gRNA2-S和TYR-E1-gRNA2-A,然后混合并进行退火,得到具有粘性末端的双链DNA分子。将具有粘性末端的双链DNA分子和载体骨架连接,得到质粒pKG-U6gRNA(TYR-E1-gRNA2)。质粒pKG-U6gRNA(TYR-E1-gRNA2)表达SEQ ID NO:11所示的sgRNATYR-E1-gRNA2。sgRNATYR-E1-gRNA2(SEQ ID NO:11):TYR-E1-gRNA2-S and TYR-E1-gRNA2-A were synthesized separately, then mixed and annealed to obtain double-stranded DNA molecules with sticky ends. The double-stranded DNA molecules with cohesive ends and the vector backbone were ligated to obtain the plasmid pKG-U6 gRNA (TYR-E1-gRNA2). The plasmid pKG-U6 gRNA (TYR-E1-gRNA2) expresses the sgRNA TYR-E1-gRNA2 shown in SEQ ID NO: 11. sgRNA TYR-E1-gRNA2 (SEQ ID NO: 11):
GUCCUGUUGUAAAAGACGGAguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu。GUCCUGUUGUAAAAGACGGAguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu.
分别合成TYR-E1-gRNA3-S和TYR-E1-gRNA3-A,然后混合并进行退火,得到具有粘性末端的双链DNA分子。将具有粘性末端的双链DNA分子和载体骨架连接,得到质粒pKG-U6gRNA(TYR-E1-gRNA3)。质粒pKG-U6gRNA(TYR-E1-gRNA3)表达SEQ ID NO:12所示的sgRNATYR-E1-gRNA3。sgRNATYR-E1-gRNA3(SEQ ID NO:12):TYR-E1-gRNA3-S and TYR-E1-gRNA3-A were synthesized separately, then mixed and annealed to obtain double-stranded DNA molecules with sticky ends. The double-stranded DNA molecules with cohesive ends and the vector backbone were ligated to obtain plasmid pKG-U6gRNA (TYR-E1-gRNA3). The plasmid pKG-U6 gRNA (TYR-E1-gRNA3) expresses the sgRNA TYR-E1-gRNA3 shown in SEQ ID NO:12. sgRNA TYR-E1-gRNA3 (SEQ ID NO: 12):
AGACUCCCGUUCAUCCACCCguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu。AGACUCCCGUUCAUCCACCCguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu.
分别合成TYR-E1-gRNA4-S和TYR-E1-gRNA4-A,然后混合并进行退火,得到具有粘性末端的双链DNA分子。将具有粘性末端的双链DNA分子和载体骨架连接,得到质粒pKG-U6gRNA(TYR-E1-gRNA4)。质粒pKG-U6gRNA(TYR-E1-gRNA4)表达SEQ ID NO:13所示的sgRNATYR-E1-gRNA4。sgRNATYR-E1-gRNA4(SEQ ID NO:13):TYR-E1-gRNA4-S and TYR-E1-gRNA4-A were synthesized separately, then mixed and annealed to obtain double-stranded DNA molecules with cohesive ends. The double-stranded DNA molecule with cohesive ends and the vector backbone were ligated to obtain the plasmid pKG-U6gRNA (TYR-E1-gRNA4). The plasmid pKG-U6 gRNA (TYR-E1-gRNA4) expresses the sgRNA TYR-E1-gRNA4 shown in SEQ ID NO:13. sgRNA TYR-E1-gRNA4 (SEQ ID NO: 13):
GGUCCUGUUGUAAAAGACGGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu。GGUCCUGUUGUAAAAGACGGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu.
TYR-E1-gRNA1-S:caccgACCTCAGTTCCCCTTCACCG;TYR-E1-gRNA1-S: caccgACCTCAGTTCCCCTTCACCG;
TYR-E1-gRNA1-A:aaacCGGTGAAGGGGAACTGAGGTc;TYR-E1-gRNA1-A: aaacCGGTGAAGGGGAACTGAGGTc;
TYR-E1-gRNA2-S:caccGTCCTGTTGTAAAAGACGGA;TYR-E1-gRNA2-S: caccGTCCTGTTGTAAAAGACGGA;
TYR-E1-gRNA2-A:aaacTCCGTCTTTTACAACAGGAC;TYR-E1-gRNA2-A:aaacTCCGTCTTTTACAACAGGAC;
TYR-E1-gRNA3-S:caccgAGACTCCCGTTCATCCACCC;TYR-E1-gRNA3-S: caccgAGACTCCCGTTCATCCACCC;
TYR-E1-gRNA3-A:aaacGGGTGGATGAACGGGAGTCTc;TYR-E1-gRNA3-A: aaacGGGTGGATGAACGGGAGTCTc;
TYR-E1-gRNA4-S:caccGGTCCTGTTGTAAAAGACGG;TYR-E1-gRNA4-S: caccGGTCCTGTTGTAAAAGACGG;
TYR-E1-gRNA4-A:aaacCCGTCTTTTACAACAGGACC。TYR-E1-gRNA4-A: aaacCCGTCTTTTACAACAGGACC.
TYR-E1-gRNA1-S、TYR-E1-gRNA1-A、TYR-E1-gRNA2-S、TYR-E1-gRNA2-A、TYR-E1-gRNA3-S、TYR-E1-gRNA3-A、TYR-E1-gRNA4-S、TYR-E1-gRNA4-A均为单链DNA分子。TYR-E1-gRNA1-S, TYR-E1-gRNA1-A, TYR-E1-gRNA2-S, TYR-E1-gRNA2-A, TYR-E1-gRNA3-S, TYR-E1-gRNA3-A, TYR- Both E1-gRNA4-S and TYR-E1-gRNA4-A are single-stranded DNA molecules.
四、不同靶点的编辑效率比较4. Comparison of editing efficiency of different targets
1、共转染1. Co-transfection
第一组:将质粒pKG-U6gRNA(TYR-E1-gRNA1)、质粒pKG-GE3共转染猪原代成纤维细胞。配比:约20万个猪原代成纤维细胞:0.92μg质粒pKG-U6gRNA(TYR-E1-gRNA1):1.08μg质粒pKG-GE3。The first group: the plasmid pKG-U6gRNA (TYR-E1-gRNA1) and the plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Ratio: about 200,000 porcine primary fibroblasts: 0.92 μg plasmid pKG-U6gRNA (TYR-E1-gRNA1): 1.08 μg plasmid pKG-GE3.
第二组:将质粒pKG-U6gRNA(TYR-E1-gRNA2)、质粒pKG-GE3共转染猪原代成纤维细胞。配比:约20万个猪原代成纤维细胞:0.92μg质粒pKG-U6gRNA(TYR-E1-gRNA2):1.08μg质粒pKG-GE3。The second group: the plasmid pKG-U6gRNA (TYR-E1-gRNA2) and the plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Ratio: about 200,000 primary porcine fibroblasts: 0.92 μg plasmid pKG-U6gRNA (TYR-E1-gRNA2): 1.08 μg plasmid pKG-GE3.
第三组:将质粒pKG-U6gRNA(TYR-E1-gRNA3)、质粒pKG-GE3共转染猪原代成纤维细胞。配比:约20万个猪原代成纤维细胞:0.92μg质粒pKG-U6gRNA(TYR-E1-gRNA3):1.08μg质粒pKG-GE3。The third group: the plasmid pKG-U6gRNA (TYR-E1-gRNA3) and the plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Ratio: about 200,000 porcine primary fibroblasts: 0.92 μg plasmid pKG-U6gRNA (TYR-E1-gRNA3): 1.08 μg plasmid pKG-GE3.
第四组:将质粒pKG-U6gRNA(TYR-E1-gRNA4)、质粒pKG-GE3共转染猪原代成纤维细胞。配比:约20万个猪原代成纤维细胞:0.92μg质粒pKG-U6gRNA(TYR-E1-gRNA4):1.08μg质粒pKG-GE3。The fourth group: the plasmid pKG-U6gRNA (TYR-E1-gRNA4) and the plasmid pKG-GE3 were co-transfected into porcine primary fibroblasts. Ratio: about 200,000 primary porcine fibroblasts: 0.92 μg plasmid pKG-U6gRNA (TYR-E1-gRNA4): 1.08 μg plasmid pKG-GE3.
第五组:猪原代成纤维细胞,同等电转参数不加质粒进行电转操作。The fifth group: porcine primary fibroblasts, electroporated with the same electroporation parameters without plasmids.
共转染采用电击转染的方式,采用哺乳动物核转染试剂盒(Neon kit,Thermofisher)与Neon TM transfection system电转仪(参数设置为:1450V、10ms、3pulse)。Co-transfection was performed by electroporation, using a mammalian nucleofection kit (Neon kit, Thermofisher) and a Neon TM transfection system electroporator (parameter settings: 1450V, 10ms, 3pulse).
2、完成步骤1后,采用完全培养液培养12-18小时,然后更换新的完全培养液进行培养。电转后培养总时间为48小时。2. After completing
3、完成步骤2后,采用胰蛋白酶消化并收集细胞,裂解细胞,提取基因组DNA,采用TYR-E1-JDF70和TYR-E1-JDR511组成的引物对进行PCR扩增,然后进行1%琼脂糖凝胶电泳。检测细胞靶基因突变情况,电泳图见图7。3. After completing
将目的产物切胶回收后送测序公司进行测序,然后将测序结果利用网页版Synthego ICE工具分析测序峰图得出不同靶点的基因编辑效率。第一组至第四组的基因编辑效率依次为40%、30%、14%、18%,第五组未发生基因编辑。结果表明,TYR-E1-gRNA1和TYR-E1-gRNA2编辑效率较高。The target product was recovered by cutting the gel and sent to a sequencing company for sequencing, and then the sequencing results were analyzed using the web version of the Synthego ICE tool to analyze the sequencing peak map to obtain the gene editing efficiency of different targets. The gene editing efficiencies of the first to fourth groups were 40%, 30%, 14%, and 18%, respectively, and no gene editing occurred in the fifth group. The results showed that TYR-E1-gRNA1 and TYR-E1-gRNA2 had higher editing efficiency.
实施例5、利用体细胞克隆的方法制备TYR基因精确突变的单细胞克隆Example 5. Preparation of single-cell clones with precise mutation of TYR gene using the method of somatic cell cloning
选用实施例4中筛到的两个高效gRNA靶点(TYR-E1-gRNA1和TYR-E1-gRNA2)。Two high-efficiency gRNA targets (TYR-E1-gRNA1 and TYR-E1-gRNA2) screened in Example 4 were selected.
一、制备gRNA1. Preparation of gRNA
1、制备TYR-T7-gRNA1转录模板和TYR-T7-gRNA5转录模板1. Preparation of TYR-T7-gRNA1 transcription template and TYR-T7-gRNA5 transcription template
TYR-T7-gRNA1转录模板为双链DNA分子,如SEQ ID NO:14所示。The TYR-T7-gRNA1 transcription template is a double-stranded DNA molecule, as shown in SEQ ID NO:14.
TYR-T7-gRNA2转录模板为双链DNA分子,如SEQ ID NO:15所示。The TYR-T7-gRNA2 transcription template is a double-stranded DNA molecule, as shown in SEQ ID NO:15.
2、体外转录得到gRNA2. In vitro transcription to obtain gRNA
取TYR-T7-gRNA1转录模板,采用Transcript Aid T7 High Yield TranscriptionKit(Fermentas,K0441)进行体外转录,然后用MEGA clearTM Transcription Clean-Up Kit(Thermo,AM1908)进行回收纯化,得到TYR-gRNA1。TYR-gRNA1为单链RNA,如SEQ ID NO:16所示。The TYR-T7-gRNA1 transcription template was taken and transcribed in vitro with Transcript Aid T7 High Yield Transcription Kit (Fermentas, K0441), and then recovered and purified with MEGA clear TM Transcription Clean-Up Kit (Thermo, AM1908) to obtain TYR-gRNA1. TYR-gRNA1 is a single-stranded RNA, as shown in SEQ ID NO:16.
TYR-gRNA1(SEQ ID NO:16):TYR-gRNA1 (SEQ ID NO: 16):
GGACCUCAGUUCCCCUUCACCGGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUGGCACCGAGUCGGUGCUUUU。GGACCUCAGUUCCCCUUCACCGGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUGGCACCGAGUCGGGUGCUUUU.
取TYR-T7-gRNA2转录模板,采用Transcript Aid T7 High Yield TranscriptionKit(Fermentas,K0441)进行体外转录,然后用MEGA clearTM Transcription Clean-Up Kit(Thermo,AM1908)进行回收纯化,得到TYR-gRNA2。TYR-gRNA2为单链RNA,如SEQ ID NO:17所示。The TYR-T7-gRNA2 transcription template was taken and transcribed in vitro with Transcript Aid T7 High Yield Transcription Kit (Fermentas, K0441), and then recovered and purified with MEGA clear TM Transcription Clean-Up Kit (Thermo, AM1908) to obtain TYR-gRNA2. TYR-gRNA2 is a single-stranded RNA, as shown in SEQ ID NO:17.
TYR-gRNA2(SEQ ID NO:17):TYR-gRNA2 (SEQ ID NO: 17):
GGGUCCUGUUGUAAAAGACGGAGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUGGCACCGAGUCGGUGCUUUU。GGGUCCUGUUGUAAAAGACGGAGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUGGCACCGAGUCGGGUGCUUUU.
二、合成在TYR基因靶位点突变的单链Donor DNA2. Synthesis of single-stranded Donor DNA mutated at the target site of the TYR gene
合成对应R77L突变的单链DNA作为Donor DNA,该单链DNA除靶位点突变外还含有TYR-E1-gRNA1和TYR-E1-gRNA2靶点PAM或邻近PAM的3’端序列同义突变。该单链Donor DNA命名为TYR-E1mut-ss126。The single-stranded DNA corresponding to the R77L mutation was synthesized as Donor DNA. In addition to the target site mutation, the single-stranded DNA also contained the TYR-E1-gRNA1 and TYR-E1-gRNA2 target PAM or the 3'-end sequence synonymous mutation adjacent to the PAM. The single-stranded Donor DNA was named TYR-E1mut-ss126.
TYR-E1mut-ss126如SEQ ID NO:18所示。TYR-E1mut-ss126 is shown in SEQ ID NO:18.
TYR-E1mut-ss126(SEQ ID NO:18):TYR-E1mut-ss126 (SEQ ID NO: 18):
ggacatcattctgtccaaggcacccctgggacctcagttccccttcaccggAgtggatgaacTggagtcttggccctcAgtcttttacaacaggacctgccagtgctttggcaacttcatgggatt。ggacatcattctgtccaaggcacccctgggacctcagttccccttcaccggAgtggatgaacTggagtcttggccctcAgtcttttacaacaggacctgccagtgctttggcaacttcatgggatt.
三、转染猪原代成纤维细胞3. Transfection of porcine primary fibroblasts
1、将TYR-gRNA1、TYR-gRNA2、TYR-E1mut-ss126和NCN蛋白共转染猪原代成纤维细胞。配比:约10万个猪原代成纤维细胞:1μg TYR-gRNA1:1μg TYR-gRNA2:2μg TYR-E1mut-ss126:4μg NCN蛋白。共转染采用电击转染的方式,采用哺乳动物核转染试剂盒(Neon kit,Thermofisher)与Neon TM transfection system电转仪(参数设置为:1450V、10ms、3pulse)。1. Co-transfect porcine primary fibroblasts with TYR-gRNA1, TYR-gRNA2, TYR-E1mut-ss126 and NCN protein. Ratio: about 100,000 primary porcine fibroblasts: 1 μg TYR-gRNA1: 1 μg TYR-gRNA2: 2 μg TYR-E1mut-ss126: 4 μg NCN protein. Co-transfection was performed by electroporation, using a mammalian nucleofection kit (Neon kit, Thermofisher) and a Neon TM transfection system electroporator (parameter settings: 1450V, 10ms, 3pulse).
2、完成步骤1后,采用完全培养液培养16-18小时,然后更换新的完全培养液进行培养。电转后培养总时间为48小时。2. After completing
3、完成步骤2后,采用胰蛋白酶消化并收集细胞,然后用完全培养液洗涤,然后用完全培养液重悬,然后分别挑取各个单克隆转移到96孔板中(每个孔1个细胞,每个孔中装有100μl完全培养液),培养2周(每2-3天更换新的完全培养液)。3. After completing
4、完成步骤3后,采用胰蛋白酶消化并收集细胞(每孔得到的细胞,约2/3接种到装有完全培养液的6孔板中,剩余的1/3收集在1.5mL离心管中)。4. After completing
5、取步骤4的6孔板,培养直至细胞长至80%汇合度,采用胰蛋白酶消化并收集细胞,使用细胞冻存液(90%完全培养基+10%DMSO,体积比)将细胞冻存。5. Take the 6-well plate from
6、取步骤4的离心管,取细胞,进行细胞裂解并提取基因组DNA,采用TYR-E1-JDF70和TYR-E1-JDR511组成的引物对进行PCR扩增,然后进行电泳。将猪原代成纤维细胞作为野生型对照(WT)。电泳图见图8。图8中的泳道编号与表1中的细胞编号一致。6. Take the centrifuge tube of
7、完成步骤6后,回收PCR扩增产物并测序。7. After completing
猪原代成纤维细胞的测序结果只有一种,其基因型为纯合野生型。如果某一单细胞克隆的测序结果有两种,一种与猪原代成纤维细胞的测序结果一致,另一种与猪原代成纤维细胞的测序结果相比发生了突变(突变包括一个或多个核苷酸的缺失、插入或替换),该单细胞克隆的基因型为杂合型;如果某一单细胞克隆的测序结果为两种,均与猪原代成纤维细胞的测序结果相比发生了突变(突变包括一个或多个核苷酸的缺失、插入或替换),该单细胞克隆的基因型为双等位基因不同突变型;如果某一单细胞克隆的测序结果为一种,且与猪原代成纤维细胞的测序结果相比发生了突变(突变包括一个或多个核苷酸的缺失、插入或替换),该单细胞克隆的基因型为双等位基因相同突变型;如果某一单细胞克隆的测序结果为一种,且与猪原代成纤维细胞的测序结果一致,该单细胞克隆的基因型为纯合野生型。There is only one sequencing result of porcine primary fibroblasts, and its genotype is homozygous wild type. If a single-cell clone has two sequencing results, one is consistent with the sequencing results of porcine primary fibroblasts, and the other is mutated compared with the sequencing results of porcine primary fibroblasts (mutations include one or more nucleotide deletions, insertions or substitutions), the genotype of the single-cell clone is heterozygous; if the sequencing results of a single-cell clone are two, compared with the sequencing results of porcine primary fibroblasts Mutation (mutation includes deletion, insertion or substitution of one or more nucleotides), the genotype of the single-cell clone is a biallelic different mutant; if the sequencing result of a single-cell clone is one, and the Compared with the sequencing results of porcine primary fibroblasts, there is a mutation (mutation includes deletion, insertion or substitution of one or more nucleotides), and the genotype of the single-cell clone is the same biallelic mutant; if a certain The sequencing result of the single-cell clone is one, which is consistent with the sequencing result of primary porcine fibroblasts, and the genotype of the single-cell clone is homozygous wild type.
结果见表1。编号为5、12、18、25、30、44、45的单细胞克隆的基因型为纯合野生型。编号为3、8、9、11、16、17、19、23、26、27、28、29、32、33、34、36、37、38、39、41、42、47、48的单细胞克隆的基因型为杂合型。编号为4、7、15、21、22、24、31、35、46的单细胞克隆的基因型为双等位基因不同突变型。编号为1、2、6、10、13、14、20、40、43的单细胞克隆的基因型为双等位基因相同突变型。其中,编号为9的单细胞克隆为靶标位点突变的杂合型(即两条同源染色体中的一条完成了单链Donor DNA的替换)。编号为7、15、21、24、31、35的单细胞克隆为靶位点突变的双等位基因不同突变型(即两条同源染色体中的一条完成了单链Donor DNA的替换)。编号为2、40的单细胞克隆为靶位点突变的双等位基因相同突变型(即两条同源染色体均完成了单链Donor DNA的替换)。得到TYR基因外显子1基因编辑单细胞克隆的比率为85.42%,得到靶位点突变的单细胞克隆(即编号为2、7、9、15、21、24、31、35、40的单细胞克隆)的比率为18.75%。The results are shown in Table 1. The genotypes of the single-cell clones numbered 5, 12, 18, 25, 30, 44, and 45 were homozygous wild-type. Single cells numbered 3, 8, 9, 11, 16, 17, 19, 23, 26, 27, 28, 29, 32, 33, 34, 36, 37, 38, 39, 41, 42, 47, 48 The genotype of the clone is heterozygous. The genotypes of the single-cell clones numbered 4, 7, 15, 21, 22, 24, 31, 35, and 46 were biallelic different mutants. The genotypes of the single-cell clones numbered 1, 2, 6, 10, 13, 14, 20, 40, and 43 were biallelic identical mutants. Among them, the single-cell clone numbered 9 is a heterozygous type of target site mutation (that is, one of the two homologous chromosomes has completed the replacement of single-stranded Donor DNA). The single-cell clones numbered 7, 15, 21, 24, 31, and 35 were biallelic different mutants of target site mutation (ie, one of the two homologous chromosomes completed the replacement of single-stranded Donor DNA). The single-cell clones numbered 2 and 40 are biallelic identical mutants of the target site mutation (that is, the single-stranded Donor DNA has been replaced on both homologous chromosomes). The rate of obtaining
示例性的测序比对结果如图9至图14。图9是编号为12的单细胞克隆的正向和反向测序与靶位点野生型序列的比对结果,为纯合野生型。图10是编号为8的单细胞克隆的反向测序与靶位点野生型序列的比对结果,为杂合型。图11是编号为46的单细胞克隆的正向测序和反向测序与靶位点野生型序列的比对结果,为双等位基因不同突变型。图12是编号为20的单细胞克隆的正向测序和反向测序与靶位点野生型序列的比对结果,为双等位基因相同突变型。图13是编号为9的单细胞克隆的正向测序和反向测序与靶位点野生型序列的比对结果,为靶位点点突变的杂合型。图14是编号为2的单细胞克隆的正向测序和反向测序与靶位点野生型序列的比对结果,为靶位点点突变的双等位基因相同突变型。Exemplary sequencing alignment results are shown in Figures 9-14. Figure 9 shows the alignment results of forward and reverse sequencing of the single-cell clone numbered 12 with the target site wild-type sequence, which is homozygous wild-type. Figure 10 is the alignment result of the single-cell clone numbered 8 by reverse sequencing and the wild-type sequence of the target site, which is a heterozygous type. Figure 11 shows the alignment results of forward sequencing and reverse sequencing of the single-cell clone numbered 46 with the wild-type sequence of the target site, which is a biallelic different mutant. Figure 12 shows the alignment results of forward sequencing and reverse sequencing of the single-cell clone numbered 20 with the wild-type sequence of the target site, which is a biallelic identical mutant. Figure 13 shows the alignment results of forward sequencing and reverse sequencing of the single-cell clone numbered 9 with the wild-type sequence of the target site, which is a heterozygous type of the target site mutation. Figure 14 shows the alignment results of forward sequencing and reverse sequencing of the single-cell clone numbered 2 with the wild-type sequence of the target site, which is a biallelic identical mutant of the target site point mutation.
表1 TYR基因点突变单细胞克隆的基因型测定结果Table 1 Genotyping results of single-cell clones with TYR gene point mutation
注:靶位点突变指的是完成了单链Donor DNA的替换;即用SEQ ID NO:18所示的DNA分子取代了染色体DNA中SEQ ID NO:19所示的DNA分子。Note: The target site mutation refers to the completion of the replacement of single-stranded Donor DNA; that is, the DNA molecule shown in SEQ ID NO: 19 in the chromosomal DNA is replaced by the DNA molecule shown in SEQ ID NO: 18.
编号为2、40的单细胞克隆为靶位点突变的双等位基因相同突变型(即两条同源染色体均完成了单链Donor DNA的替换)。靶位点突变的双等位基因相同突变型细胞可用于进行后续的克隆猪生产。将细胞作为核移植供体细胞进行体细胞克隆,可以得到克隆猪,即为白化病模型猪。The single-cell clones numbered 2 and 40 are biallelic identical mutants of the target site mutation (that is, the single-stranded Donor DNA has been replaced on both homologous chromosomes). Biallelic identical mutant cells mutated at the target site can be used for subsequent cloned pig production. The cells are used as donor cells for nuclear transplantation for somatic cell cloning, and cloned pigs can be obtained, which are model pigs of albinism.
以上对本发明进行了详述。对于本领域技术人员来说,在不脱离本发明的宗旨和范围,以及无需进行不必要的实验情况下,可在等同参数、浓度和条件下,在较宽范围内实施本发明。虽然本发明给出了特殊的实施例,应该理解为,可以对本发明作进一步的改进。总之,按本发明的原理,本申请欲包括任何变更、用途或对本发明的改进,包括脱离了本申请中已公开范围,而用本领域已知的常规技术进行的改变。按以下附带的权利要求的范围,可以进行一些基本特征的应用。The present invention has been described in detail above. For those skilled in the art, without departing from the spirit and scope of the present invention, and without unnecessary experimentation, the present invention can be implemented in a wide range under equivalent parameters, concentrations and conditions. While the invention has been given particular embodiments, it should be understood that the invention can be further modified. In conclusion, in accordance with the principles of the present invention, this application is intended to cover any alterations, uses or improvements of the present invention, including changes made using conventional techniques known in the art, departing from the scope disclosed in this application. The application of some of the essential features can be made within the scope of the following appended claims.
序列表 sequence listing
<110> 南京启真基因工程有限公司<110> Nanjing Qizhen Genetic Engineering Co., Ltd.
<120> 用于构建OCA-1A型白化病模型猪核移植供体细胞的基因编辑系统及其应用<120> Gene Editing System for Construction of OCA-1A Albinism Model Pig Nuclear Transplantation Donor Cells and Its Application
<130> GNCYX212009<130> GNCYX212009
<160> 19<160> 19
<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0
<210> 1<210> 1
<211> 9974<211> 9974
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 1<400> 1
tggcgaatgg gacgcgccct gtagcggcgc attaagcgcg gcgggtgtgg tggttacgcg 60tggcgaatgg gacgcgccct gtagcggcgc attaagcgcg gcgggtgtgg tggttacgcg 60
cagcgtgacc gctacacttg ccagcgccct agcgcccgct cctttcgctt tcttcccttc 120cagcgtgacc gctacacttg ccagcgccct agcgcccgct cctttcgctt tcttcccttc 120
ctttctcgcc acgttcgccg gctttccccg tcaagctcta aatcgggggc tccctttagg 180ctttctcgcc acgttcgccg gctttccccg tcaagctcta aatcgggggc tccctttagg 180
gttccgattt agtgctttac ggcacctcga ccccaaaaaa cttgattagg gtgatggttc 240gttccgattt agtgctttac ggcacctcga ccccaaaaaa cttgattagg gtgatggttc 240
acgtagtggg ccatcgccct gatagacggt ttttcgccct ttgacgttgg agtccacgtt 300acgtagtggg ccatcgccct gatagacggt ttttcgccct ttgacgttgg agtccacgtt 300
ctttaatagt ggactcttgt tccaaactgg aacaacactc aaccctatct cggtctattc 360ctttaatagt ggactcttgt tccaaactgg aacaacactc aaccctatct cggtctattc 360
ttttgattta taagggattt tgccgatttc ggcctattgg ttaaaaaatg agctgattta 420ttttgattta taagggattt tgccgatttc ggcctattgg ttaaaaaatg agctgattta 420
acaaaaattt aacgcgaatt ttaacaaaat attaacgttt acaatttcag gtggcacttt 480acaaaaattt aacgcgaatt ttaacaaaat attaacgttt acaatttcag gtggcacttt 480
tcggggaaat gtgcgcggaa cccctatttg tttatttttc taaatacatt caaatatgta 540tcggggaaat gtgcgcggaa cccctatttg ttattttttc taaatacatt caaatatgta 540
tccgctcatg agacaataac cctgataaat gcttcaataa tattgaaaaa ggaagagtat 600tccgctcatg agacaataac cctgataaat gcttcaataa tattgaaaaa ggaagagtat 600
gagtattcaa catttccgtg tcgcccttat tccctttttt gcggcatttt gccttcctgt 660gagtattcaa catttccgtg tcgcccttat tcccttttttt gcggcatttt gccttcctgt 660
ttttgctcac ccagaaacgc tggtgaaagt aaaagatgct gaagatcagt tgggtgcacg 720ttttgctcac ccagaaacgc tggtgaaagt aaaagatgct gaagatcagt tgggtgcacg 720
agtgggttac atcgaactgg atctcaacag cggtaagatc cttgagagtt ttcgccccga 780agtgggttac atcgaactgg atctcaacag cggtaagatc cttgagagtt ttcgccccga 780
agaacgtttt ccaatgatga gcacttttaa agttctgcta tgtggcgcgg tattatcccg 840agaacgtttt ccaatgatga gcacttttaa agttctgcta tgtggcgcgg tattatcccg 840
tattgacgcc gggcaagagc aactcggtcg ccgcatacac tattctcaga atgacttggt 900tattgacgcc gggcaagagc aactcggtcg ccgcatacac tattctcaga atgacttggt 900
tgagtactca ccagtcacag aaaagcatct tacggatggc atgacagtaa gagaattatg 960tgagtactca ccagtcacag aaaagcatct tacggatggc atgacagtaa gagaattatg 960
cagtgctgcc ataaccatga gtgataacac tgcggccaac ttacttctga caacgatcgg 1020cagtgctgcc ataaccatga gtgataacac tgcggccaac ttacttctga caacgatcgg 1020
aggaccgaag gagctaaccg cttttttgca caacatgggg gatcatgtaa ctcgccttga 1080aggaccgaag gagctaaccg cttttttgca caacatgggg gatcatgtaa ctcgccttga 1080
tcgttgggaa ccggagctga atgaagccat accaaacgac gagcgtgaca ccacgatgcc 1140tcgttgggaa ccggagctga atgaagccat accaaacgac gagcgtgaca ccacgatgcc 1140
tgcagcaatg gcaacaacgt tgcgcaaact attaactggc gaactactta ctctagcttc 1200tgcagcaatg gcaacaacgt tgcgcaaact attaactggc gaactactta ctctagcttc 1200
ccggcaacaa ttaatagact ggatggaggc ggataaagtt gcaggaccac ttctgcgctc 1260ccggcaacaa ttaatagact ggatggaggc ggataaagtt gcaggaccac ttctgcgctc 1260
ggcccttccg gctggctggt ttattgctga taaatctgga gccggtgagc gtgggtctcg 1320ggcccttccg gctggctggt ttattgctga taaatctgga gccggtgagc gtgggtctcg 1320
cggtatcatt gcagcactgg ggccagatgg taagccctcc cgtatcgtag ttatctacac 1380cggtatcatt gcagcactgg ggccagatgg taagccctcc cgtatcgtag ttatctacac 1380
gacggggagt caggcaacta tggatgaacg aaatagacag atcgctgaga taggtgcctc 1440gacggggagt caggcaacta tggatgaacg aaatagacag atcgctgaga taggtgcctc 1440
actgattaag cattggtaac tgtcagacca agtttactca tatatacttt agattgattt 1500actgattaag cattggtaac tgtcagacca agtttactca tatatacttt agattgattt 1500
aaaacttcat ttttaattta aaaggatcta ggtgaagatc ctttttgata atctcatgac 1560aaaacttcat ttttaattta aaaggatcta ggtgaagatc ctttttgata atctcatgac 1560
caaaatccct taacgtgagt tttcgttcca ctgagcgtca gaccccgtag aaaagatcaa 1620caaaatccct taacgtgagt tttcgttcca ctgagcgtca gaccccgtag aaaagatcaa 1620
aggatcttct tgagatcctt tttttctgcg cgtaatctgc tgcttgcaaa caaaaaaacc 1680aggatcttct tgagatcctt ttttttctgcg cgtaatctgc tgcttgcaaa caaaaaaacc 1680
accgctacca gcggtggttt gtttgccgga tcaagagcta ccaactcttt ttccgaaggt 1740accgctacca gcggtggttt gtttgccgga tcaagagcta ccaactcttt ttccgaaggt 1740
aactggcttc agcagagcgc agataccaaa tactgtcctt ctagtgtagc cgtagttagg 1800aactggcttc agcagagcgc agataccaaa tactgtcctt ctagtgtagc cgtagttagg 1800
ccaccacttc aagaactctg tagcaccgcc tacatacctc gctctgctaa tcctgttacc 1860ccaccacttc aagaactctg tagcaccgcc tacatacctc gctctgctaa tcctgttacc 1860
agtggctgct gccagtggcg ataagtcgtg tcttaccggg ttggactcaa gacgatagtt 1920agtggctgct gccagtggcg ataagtcgtg tcttaccggg ttggactcaa gacgatagtt 1920
accggataag gcgcagcggt cgggctgaac ggggggttcg tgcacacagc ccagcttgga 1980accggataag gcgcagcggt cgggctgaac ggggggttcg tgcacacagc ccagcttgga 1980
gcgaacgacc tacaccgaac tgagatacct acagcgtgag ctatgagaaa gcgccacgct 2040gcgaacgacc tacaccgaac tgagatacct acagcgtgag ctatgagaaa gcgccacgct 2040
tcccgaaggg agaaaggcgg acaggtatcc ggtaagcggc agggtcggaa caggagagcg 2100tcccgaaggg agaaaggcgg acaggtatcc ggtaagcggc agggtcggaa caggagagcg 2100
cacgagggag cttccagggg gaaacgcctg gtatctttat agtcctgtcg ggtttcgcca 2160cacgagggag cttccagggg gaaacgcctg gtatctttat agtcctgtcg ggtttcgcca 2160
cctctgactt gagcgtcgat ttttgtgatg ctcgtcaggg gggcggagcc tatggaaaaa 2220cctctgactt gagcgtcgat ttttgtgatg ctcgtcaggg gggcggagcc tatggaaaaa 2220
cgccagcaac gcggcctttt tacggttcct ggccttttgc tggccttttg ctcacatgtt 2280cgccagcaac gcggcctttt tacggttcct ggccttttgc tggccttttg ctcacatgtt 2280
ctttcctgcg ttatcccctg attctgtgga taaccgtatt accgcctttg agtgagctga 2340ctttcctgcg ttatcccctg attctgtgga taaccgtatt accgcctttg agtgagctga 2340
taccgctcgc cgcagccgaa cgaccgagcg cagcgagtca gtgagcgagg aagcggaaga 2400taccgctcgc cgcagccgaa cgaccgagcg cagcgagtca gtgagcgagg aagcggaaga 2400
gcgcctgatg cggtattttc tccttacgca tctgtgcggt atttcacacc gcatatatgg 2460gcgcctgatg cggtattttc tccttacgca tctgtgcggt atttcacacc gcatatatgg 2460
tgcactctca gtacaatctg ctctgatgcc gcatagttaa gccagtatac actccgctat 2520tgcactctca gtacaatctg ctctgatgcc gcatagttaa gccagtatac actccgctat 2520
cgctacgtga ctgggtcatg gctgcgcccc gacacccgcc aacacccgct gacgcgccct 2580cgctacgtga ctgggtcatg gctgcgcccc gacacccgcc aacacccgct gacgcgccct 2580
gacgggcttg tctgctcccg gcatccgctt acagacaagc tgtgaccgtc tccgggagct 2640gacgggcttg tctgctcccg gcatccgctt acagacaagc tgtgaccgtc tccgggagct 2640
gcatgtgtca gaggttttca ccgtcatcac cgaaacgcgc gaggcagctg cggtaaagct 2700gcatgtgtca gaggttttca ccgtcatcac cgaaacgcgc gaggcagctg cggtaaagct 2700
catcagcgtg gtcgtgaagc gattcacaga tgtctgcctg ttcatccgcg tccagctcgt 2760catcagcgtg gtcgtgaagc gattcacaga tgtctgcctg ttcatccgcg tccagctcgt 2760
tgagtttctc cagaagcgtt aatgtctggc ttctgataaa gcgggccatg ttaagggcgg 2820tgagtttctc cagaagcgtt aatgtctggc ttctgataaa gcgggccatg ttaagggcgg 2820
ttttttcctg tttggtcact gatgcctccg tgtaaggggg atttctgttc atgggggtaa 2880ttttttcctg tttggtcact gatgcctccg tgtaaggggg atttctgttc atgggggtaa 2880
tgataccgat gaaacgagag aggatgctca cgatacgggt tactgatgat gaacatgccc 2940tgataccgat gaaacgagag aggatgctca cgatacgggt tactgatgat gaacatgccc 2940
ggttactgga acgttgtgag ggtaaacaac tggcggtatg gatgcggcgg gaccagagaa 3000ggttactgga acgttgtgag ggtaaacaac tggcggtatg gatgcggcgg gaccagagaa 3000
aaatcactca gggtcaatgc cagcgcttcg ttaatacaga tgtaggtgtt ccacagggta 3060aaatcactca gggtcaatgc cagcgcttcg ttaatacaga tgtaggtgtt ccacagggta 3060
gccagcagca tcctgcgatg cagatccgga acataatggt gcagggcgct gacttccgcg 3120gccagcagca tcctgcgatg cagatccgga acataatggt gcagggcgct gacttccgcg 3120
tttccagact ttacgaaaca cggaaaccga agaccattca tgttgttgct caggtcgcag 3180tttccagact ttacgaaaca cggaaaccga agaccattca tgttgttgct caggtcgcag 3180
acgttttgca gcagcagtcg cttcacgttc gctcgcgtat cggtgattca ttctgctaac 3240acgttttgca gcagcagtcg cttcacgttc gctcgcgtat cggtgattca ttctgctaac 3240
cagtaaggca accccgccag cctagccggg tcctcaacga caggagcacg atcatgcgca 3300cagtaaggca accccgccag cctagccggg tcctcaacga caggagcacg atcatgcgca 3300
cccgtggggc cgccatgccg gcgataatgg cctgcttctc gccgaaacgt ttggtggcgg 3360cccgtggggc cgccatgccg gcgataatgg cctgcttctc gccgaaacgt ttggtggcgg 3360
gaccagtgac gaaggcttga gcgagggcgt gcaagattcc gaataccgca agcgacaggc 3420gaccagtgac gaaggcttga gcgagggcgt gcaagattcc gaataccgca agcgacaggc 3420
cgatcatcgt cgcgctccag cgaaagcggt cctcgccgaa aatgacccag agcgctgccg 3480cgatcatcgt cgcgctccag cgaaagcggt cctcgccgaa aatgacccag agcgctgccg 3480
gcacctgtcc tacgagttgc atgataaaga agacagtcat aagtgcggcg acgatagtca 3540gcacctgtcc tacgagttgc atgataaaga agacagtcat aagtgcggcg acgatagtca 3540
tgccccgcgc ccaccggaag gagctgactg ggttgaaggc tctcaagggc atcggtcgag 3600tgccccgcgc ccaccggaag gagctgactg ggttgaaggc tctcaagggc atcggtcgag 3600
atcccggtgc ctaatgagtg agctaactta cattaattgc gttgcgctca ctgcccgctt 3660atcccggtgc ctaatgagtg agctaactta cattaattgc gttgcgctca ctgcccgctt 3660
tccagtcggg aaacctgtcg tgccagctgc attaatgaat cggccaacgc gcggggagag 3720tccagtcggg aaacctgtcg tgccagctgc attaatgaat cggccaacgc gcggggagag 3720
gcggtttgcg tattgggcgc cagggtggtt tttcttttca ccagtgagac gggcaacagc 3780gcggtttgcg tattgggcgc cagggtggtt tttcttttca ccagtgagac gggcaacagc 3780
tgattgccct tcaccgcctg gccctgagag agttgcagca agcggtccac gctggtttgc 3840tgattgccct tcaccgcctg gccctgagag agttgcagca agcggtccac gctggtttgc 3840
cccagcaggc gaaaatcctg tttgatggtg gttaacggcg ggatataaca tgagctgtct 3900cccagcaggc gaaaatcctg tttgatggtg gttaacggcg ggatataaca tgagctgtct 3900
tcggtatcgt cgtatcccac taccgagatg tccgcaccaa cgcgcagccc ggactcggta 3960tcggtatcgt cgtatcccac taccgagatg tccgcaccaa cgcgcagccc ggactcggta 3960
atggcgcgca ttgcgcccag cgccatctga tcgttggcaa ccagcatcgc agtgggaacg 4020atggcgcgca ttgcgcccag cgccatctga tcgttggcaa ccagcatcgc agtgggaacg 4020
atgccctcat tcagcatttg catggtttgt tgaaaaccgg acatggcact ccagtcgcct 4080atgccctcat tcagcatttg catggtttgt tgaaaaccgg acatggcact ccagtcgcct 4080
tcccgttccg ctatcggctg aatttgattg cgagtgagat atttatgcca gccagccaga 4140tcccgttccg ctatcggctg aatttgattg cgagtgagat atttatgcca gccagccaga 4140
cgcagacgcg ccgagacaga acttaatggg cccgctaaca gcgcgatttg ctggtgaccc 4200cgcagacgcg ccgagacaga acttaatggg cccgctaaca gcgcgatttg ctggtgaccc 4200
aatgcgacca gatgctccac gcccagtcgc gtaccgtctt catgggagaa aataatactg 4260aatgcgacca gatgctccac gcccagtcgc gtaccgtctt catgggagaa aataatactg 4260
ttgatgggtg tctggtcaga gacatcaaga aataacgccg gaacattagt gcaggcagct 4320ttgatgggtg tctggtcaga gacatcaaga aataacgccg gaacattagt gcaggcagct 4320
tccacagcaa tggcatcctg gtcatccagc ggatagttaa tgatcagccc actgacgcgt 4380tccacagcaa tggcatcctg gtcatccagc ggatagttaa tgatcagccc actgacgcgt 4380
tgcgcgagaa gattgtgcac cgccgcttta caggcttcga cgccgcttcg ttctaccatc 4440tgcgcgagaa gattgtgcac cgccgcttta caggcttcga cgccgcttcg ttctaccatc 4440
gacaccacca cgctggcacc cagttgatcg gcgcgagatt taatcgccgc gacaatttgc 4500gacaccacca cgctggcacc cagttgatcg gcgcgagatt taatcgccgc gacaatttgc 4500
gacggcgcgt gcagggccag actggaggtg gcaacgccaa tcagcaacga ctgtttgccc 4560gacggcgcgt gcagggccag actggaggtg gcaacgccaa tcagcaacga ctgtttgccc 4560
gccagttgtt gtgccacgcg gttgggaatg taattcagct ccgccatcgc cgcttccact 4620gccagttgtt gtgccacgcg gttgggaatg taattcagct ccgccatcgc cgcttccact 4620
ttttcccgcg ttttcgcaga aacgtggctg gcctggttca ccacgcggga aacggtctga 4680ttttcccgcg ttttcgcaga aacgtggctg gcctggttca ccacgcggga aacggtctga 4680
taagagacac cggcatactc tgcgacatcg tataacgtta ctggtttcac attcaccacc 4740taagagacac cggcatactc tgcgacatcg tataacgtta ctggtttcac attcaccacc 4740
ctgaattgac tctcttccgg gcgctatcat gccataccgc gaaaggtttt gcgccattcg 4800ctgaattgac tctcttccgg gcgctatcat gccataccgc gaaaggtttt gcgccattcg 4800
atggtgtccg ggatctcgac gctctccctt atgcgactcc tgcattagga agcagcccag 4860atggtgtccg ggatctcgac gctctccctt atgcgactcc tgcattagga agcagcccag 4860
tagtaggttg aggccgttga gcaccgccgc cgcaaggaat ggtgcatgca aggagatggc 4920tagtaggttg aggccgttga gcaccgccgc cgcaaggaat ggtgcatgca aggagatggc 4920
gcccaacagt cccccggcca cggggcctgc caccataccc acgccgaaac aagcgctcat 4980gcccaacagt cccccggcca cggggcctgc caccataccc acgccgaaac aagcgctcat 4980
gagcccgaag tggcgagccc gatcttcccc atcggtgatg tcggcgatat aggcgccagc 5040gagcccgaag tggcgagccc gatcttcccc atcggtgatg tcggcgatat aggcgccagc 5040
aaccgcacct gtggcgccgg tgatgccggc cacgatgcgt ccggcgtaga ggatcgagat 5100aaccgcacct gtggcgccgg tgatgccggc cacgatgcgt ccggcgtaga ggatcgagat 5100
cgatctcgat cccgcgaaat taatacgact cactataggg gaattgtgag cggataacaa 5160cgatctcgat cccgcgaaat taatacgact cactataggg gaattgtgag cggataacaa 5160
ttcccctcta gaaataattt tgtttaactt taagaaggag atatacatat gaaacaaagc 5220ttcccctcta gaaataattt tgtttaactt taagaaggag atatacatat gaaacaaagc 5220
actattgcac tggcactctt accgttactg tttacccctg tgacaaaagc catgagcgat 5280actattgcac tggcactctt accgttactg tttacccctg tgacaaaagc catgagcgat 5280
aaaattattc acctgactga cgacagtttt gacacggatg tactcaaagc ggacggggcg 5340aaaattattc acctgactga cgacagtttt gacacggatg tactcaaagc ggacggggcg 5340
atcctcgtcg atttctgggc agagtggtgc ggtccgtgca aaatgatcgc cccgattctg 5400atcctcgtcg atttctgggc agagtggtgc ggtccgtgca aaatgatcgc cccgattctg 5400
gatgaaatcg ctgacgaata tcagggcaaa ctgaccgttg caaaactgaa catcgatcaa 5460gatgaaatcg ctgacgaata tcagggcaaa ctgaccgttg caaaactgaa catcgatcaa 5460
aaccctggca ctgcgccgaa atatggcatc cgtggtatcc cgactctgct gctgttcaaa 5520aaccctggca ctgcgccgaa atatggcatc cgtggtatcc cgactctgct gctgttcaaa 5520
aacggtgaag tggcggcaac caaagtgggt gcactgtcta aaggtcagtt gaaagagttc 5580aacggtgaag tggcggcaac caaagtgggt gcactgtcta aaggtcagtt gaaagagttc 5580
ctcgacgcta acctggccgg ttctggttct ggccatatgc accatcatca tcatcatgac 5640ctcgacgcta acctggccgg ttctggttct ggccatatgc accatcatca tcatcatgac 5640
gatgacgata agatgcccaa aaagaaacga aaggtgggta tccacggagt cccagcagcc 5700gatgacgata agatgcccaa aaagaaacga aaggtgggta tccacggagt cccagcagcc 5700
gacaaaaaat atagcatcgg cctggacatc ggtaccaaca gcgttggctg ggcagtgatc 5760gacaaaaaat atagcatcgg cctggacatc ggtaccaaca gcgttggctg ggcagtgatc 5760
actgatgaat acaaagttcc atccaaaaaa tttaaagtac tgggcaacac cgaccgtcac 5820actgatgaat acaaagttcc atccaaaaaa tttaaagtac tgggcaacac cgaccgtcac 5820
tctatcaaaa aaaacctgat tggtgctctg ctgtttgaca gcggcgaaac tgctgaggct 5880tctatcaaaa aaaacctgat tggtgctctg ctgtttgaca gcggcgaaac tgctgaggct 5880
acccgtctga aacgtacggc tcgccgtcgc tacactcgtc gtaaaaaccg catctgttat 5940acccgtctga aacgtacggc tcgccgtcgc tacactcgtc gtaaaaaccg catctgttat 5940
ctgcaggaaa ttttctctaa cgaaatggca aaagttgatg atagcttctt tcatcgtctg 6000ctgcaggaaa ttttctctaa cgaaatggca aaagttgatg atagcttctt tcatcgtctg 6000
gaagagagct tcctggtgga agaagataaa aaacacgaac gtcacccgat tttcggtaac 6060gaagagagct tcctggtgga agaagataaa aaacacgaac gtcacccgat tttcggtaac 6060
attgtggatg aggttgccta ccacgagaaa tatccgacca tctaccatct gcgtaaaaaa 6120attgtggatg aggttgccta ccacgagaaa tatccgacca tctaccatct gcgtaaaaaa 6120
ctggttgata gcactgacaa agcggatctg cgtctgatct acctggctct ggcacacatg 6180ctggttgata gcactgacaa agcggatctg cgtctgatct acctggctct ggcacacatg 6180
atcaaattcc gtggtcactt cctgatcgaa ggtgatctga accctgataa ctccgacgtg 6240atcaaattcc gtggtcactt cctgatcgaa ggtgatctga accctgataa ctccgacgtg 6240
gacaaactgt tcattcagct ggttcagacc tataaccagc tgttcgaaga aaacccgatc 6300gacaaactgt tcattcagct ggttcagacc tataaccagc tgttcgaaga aaacccgatc 6300
aacgcgtccg gtgtagacgc taaggcaatt ctgtctgcgc gtctgtctaa gtctcgtcgt 6360aacgcgtccg gtgtagacgc taaggcaatt ctgtctgcgc gtctgtctaa gtctcgtcgt 6360
ctggaaaacc tgattgcgca actgccaggt gaaaagaaaa acggcctgtt cggcaatctg 6420ctggaaaacc tgattgcgca actgccaggt gaaaagaaaa acggcctgtt cggcaatctg 6420
atcgccctgt ccctgggtct gactccgaac tttaaatcca actttgacct ggcggaagat 6480atcgccctgt ccctgggtct gactccgaac tttaaatcca actttgacct ggcggaagat 6480
gccaagctgc agctgagcaa agatacctat gacgatgacc tggataacct gctggcacag 6540gccaagctgc agctgagcaa agatacctat gacgatgacc tggataacct gctggcacag 6540
atcggtgatc agtatgccga tctgttcctg gccgcgaaaa acctgtctga tgcgattctg 6600atcggtgatc agtatgccga tctgttcctg gccgcgaaaa acctgtctga tgcgattctg 6600
ctgtctgata tcctgcgcgt taacactgaa attactaaag cgccgctgag cgcatccatg 6660ctgtctgata tcctgcgcgt taacactgaa attactaaag cgccgctgag cgcatccatg 6660
attaaacgtt acgatgaaca ccaccaggat ctgaccctgc tgaaagcgct ggtgcgtcag 6720attaaacgtt acgatgaaca ccaccaggat ctgaccctgc tgaaagcgct ggtgcgtcag 6720
cagctgccgg aaaaatacaa ggagatcttc ttcgaccaga gcaaaaacgg ttacgcgggc 6780cagctgccgg aaaaatacaa ggagatcttc ttcgaccaga gcaaaaacgg ttacgcgggc 6780
tacattgatg gtggtgcatc tcaggaggaa ttctacaaat tcattaaacc gatcctggaa 6840tacattgatg gtggtgcatc tcaggaggaa ttctacaaat tcattaaacc gatcctggaa 6840
aaaatggatg gtactgaaga gctgctggtt aaactgaatc gtgaagatct gctgcgcaaa 6900aaaatggatg gtactgaaga gctgctggtt aaactgaatc gtgaagatct gctgcgcaaa 6900
cagcgtacct tcgataacgg ttccatcccg catcagattc atctgggcga actgcacgct 6960cagcgtacct tcgataacgg ttccatcccg catcagattc atctgggcga actgcacgct 6960
atcctgcgcc gtcaggaaga cttttatccg ttcctgaaag acaaccgtga gaaaattgaa 7020atcctgcgcc gtcaggaaga cttttatccg ttcctgaaag acaaccgtga gaaaattgaa 7020
aaaatcctga ccttccgtat tccgtactat gtaggtccgc tggcgcgtgg taactcccgt 7080aaaatcctga ccttccgtat tccgtactat gtaggtccgc tggcgcgtgg taactcccgt 7080
ttcgcttgga tgacccgcaa aagcgaagaa accatcaccc cgtggaattt cgaagaagtc 7140ttcgcttgga tgacccgcaa aagcgaagaa accatcaccc cgtggaattt cgaagaagtc 7140
gttgacaaag gcgcgtccgc gcagtctttc atcgaacgca tgacgaactt cgacaaaaac 7200gttgacaaag gcgcgtccgc gcagtctttc atcgaacgca tgacgaactt cgacaaaaac 7200
ctgccgaacg agaaagtgct gccgaaacac tctctgctgt acgagtactt cactgtgtac 7260ctgccgaacg agaaagtgct gccgaaacac tctctgctgt acgagtactt cactgtgtac 7260
aacgaactga ccaaagtgaa atacgtcacc gaaggtatgc gtaaaccggc attcctgtcc 7320aacgaactga ccaaagtgaa atacgtcacc gaaggtatgc gtaaaccggc attcctgtcc 7320
ggtgagcaaa aaaaagcaat cgtggatctg ctgttcaaaa ccaaccgtaa agtaaccgtg 7380ggtgagcaaa aaaaagcaat cgtggatctg ctgttcaaaa ccaaccgtaa agtaaccgtg 7380
aaacagctga aggaagacta tttcaagaaa atcgaatgtt ttgattctgt tgaaatctcc 7440aaacagctga aggaagacta tttcaagaaa atcgaatgtt ttgattctgt tgaaatctcc 7440
ggcgtggaag atcgcttcaa tgcgtccctg ggtacgtatc acgacctgct gaaaattatc 7500ggcgtggaag atcgcttcaa tgcgtccctg ggtacgtatc acgacctgct gaaaattatc 7500
aaagacaaag attttctgga caacgaggaa aacgaagaca tcctggagga tattgtactg 7560aaagacaaag attttctgga caacgaggaa aacgaagaca tcctggagga tattgtactg 7560
accctgaccc tgttcgaaga ccgtgagatg atcgaagaac gcctgaaaac ctacgcccac 7620accctgaccc tgttcgaaga ccgtgagatg atcgaagaac gcctgaaaac ctacgcccac 7620
ctgttcgatg acaaggtaat gaagcagctg aaacgtcgtc gttataccgg ctggggtcgt 7680ctgttcgatg acaaggtaat gaagcagctg aaacgtcgtc gttataccgg ctggggtcgt 7680
ctgtcccgta aactgatcaa tggcatccgt gataaacagt ctggcaaaac catcctggac 7740ctgtcccgta aactgatcaa tggcatccgt gataaacagt ctggcaaaac catcctggac 7740
ttcctgaaat ccgacggttt cgcgaatcgt aacttcatgc aactgattca tgacgattct 7800ttcctgaaat ccgacggttt cgcgaatcgt aacttcatgc aactgattca tgacgattct 7800
ctgactttca aagaagacat ccagaaagca caggtttccg gccagggtga ctctctgcac 7860ctgactttca aagaagacat ccagaaagca caggtttccg gccagggtga ctctctgcac 7860
gagcacattg ccaatctggc tggttctccg gctattaaaa agggtattct gcagactgtg 7920gagcacattg ccaatctggc tggttctccg gctattaaaa agggtattct gcagactgtg 7920
aaagtagttg atgagctggt caaagtaatg ggccgtcaca agccggaaaa cattgtgatc 7980aaagtagttg atgagctggt caaagtaatg ggccgtcaca agccggaaaa cattgtgatc 7980
gaaatggcac gtgaaaacca gacgacccag aaaggtcaga aaaactctcg tgaacgcatg 8040gaaatggcac gtgaaaacca gacgacccag aaaggtcaga aaaactctcg tgaacgcatg 8040
aaacgtatcg aagaaggcat caaagaactg ggctctcaga tcctgaagga acaccctgta 8100aaacgtatcg aagaaggcat caaagaactg ggctctcaga tcctgaagga acaccctgta 8100
gaaaataccc agctgcagaa cgaaaagctg tatctgtatt acctgcagaa cggccgcgat 8160gaaaataccc agctgcagaa cgaaaagctg tatctgtatt acctgcagaa cggccgcgat 8160
atgtatgtgg accaggaact ggatatcaac cgcctgtccg attacgatgt agatcacatc 8220atgtatgtgg accaggaact ggatatcaac cgcctgtccg attacgatgt agatcacatc 8220
gtgccgcaaa gcttcctgaa agacgacagc attgacaaca aagtactgac ccgttctgat 8280gtgccgcaaa gcttcctgaa agacgacagc attgacaaca aagtactgac ccgttctgat 8280
aagaaccgtg gcaaatccga taacgtcccg tctgaagaag ttgttaaaaa aatgaaaaac 8340aagaaccgtg gcaaatccga taacgtcccg tctgaagaag ttgttaaaaa aatgaaaaac 8340
tattggcgtc agctgctgaa cgcgaaactg atcacccagc gtaagttcga caatctgact 8400tattggcgtc agctgctgaa cgcgaaactg atcacccagc gtaagttcga caatctgact 8400
aaagctgagc gcggtggtct gtccgaactg gataaagcgg gttttatcaa acgccagctg 8460aaagctgagc gcggtggtct gtccgaactg gataaagcgg gttttatcaa acgccagctg 8460
gttgaaaccc gtcagatcac gaagcacgtt gcgcagattc tggactctcg tatgaacacc 8520gttgaaaccc gtcagatcac gaagcacgtt gcgcagattc tggactctcg tatgaacacc 8520
aaatacgacg aaaacgacaa actgatccgc gaggttaagg ttatcaccct gaaaagcaaa 8580aaatacgacg aaaacgacaa actgatccgc gaggttaagg ttatcaccct gaaaagcaaa 8580
ctggtatccg attttcgtaa agactttcag ttctacaaag tgcgcgaaat taacaactat 8640ctggtatccg attttcgtaa agactttcag ttctacaaag tgcgcgaaat taacaactat 8640
caccacgctc acgatgcata tctgaatgca gttgttggca cggcgctgat caaaaagtat 8700caccacgctc acgatgcata tctgaatgca gttgttggca cggcgctgat caaaaagtat 8700
ccgaaactgg aatctgaatt cgtatacggc gattacaaag tgtatgacgt tcgtaagatg 8760ccgaaactgg aatctgaatt cgtatacggc gattacaaag tgtatgacgt tcgtaagatg 8760
atcgcaaaat ccgagcagga aattggtaag gcgacggcga aatacttctt ttattccaat 8820atcgcaaaat ccgagcagga aattggtaag gcgacggcga aatacttctt ttattccaat 8820
attatgaact ttttcaaaac cgaaatcacc ctggcgaatg gtgaaattcg taaacgcccg 8880attatgaact ttttcaaaac cgaaatcacc ctggcgaatg gtgaaattcg taaacgcccg 8880
ctgatcgaaa ccaacggtga aactggtgaa atcgtttggg acaaaggccg cgacttcgcg 8940ctgatcgaaa ccaacggtga aactggtgaa atcgtttggg acaaaggccg cgacttcgcg 8940
accgtgcgta aagttctgtc tatgccgcaa gtgaacatcg tcaagaagac cgaagtacaa 9000accgtgcgta aagttctgtc tatgccgcaa gtgaacatcg tcaagaagac cgaagtacaa 9000
accggcggtt ttagcaaaga gagcattctg ccaaaacgta actccgacaa actgatcgcg 9060accggcggtt ttagcaaaga gagcattctg ccaaaacgta actccgacaa actgatcgcg 9060
cgcaagaaag actgggatcc gaaaaaatac ggtggtttcg attctccaac cgttgcttat 9120cgcaagaaag actgggatcc gaaaaaatac ggtggtttcg attctccaac cgttgcttat 9120
tccgttctgg tggtagccaa agttgagaaa ggtaaaagca aaaaactgaa atccgtaaag 9180tccgttctgg tggtagccaa agttgagaaa ggtaaaagca aaaaactgaa atccgtaaag 9180
gaactgctgg gtattactat catggagcgt agctccttcg aaaaaaaccc gatcgatttt 9240gaactgctgg gtattactat catggagcgt agctccttcg aaaaaaaccc gatcgatttt 9240
ctggaagcga aaggctataa agaagtcaaa aaggacctga tcatcaaact gccaaaatac 9300ctggaagcga aaggctataa agaagtcaaa aaggacctga tcatcaaact gccaaaatac 9300
agcctgttcg agctggaaaa cggccgtaaa cgtatgctgg catctgcggg cgaactgcag 9360agcctgttcg agctggaaaa cggccgtaaa cgtatgctgg catctgcggg cgaactgcag 9360
aaaggcaacg agctggctct gccgtccaaa tacgtgaact ttctgtacct ggcctctcac 9420aaaggcaacg agctggctct gccgtccaaa tacgtgaact ttctgtacct ggcctctcac 9420
tacgaaaaac tgaaaggttc cccggaagac aacgaacaga aacagctgtt cgtagagcag 9480tacgaaaaac tgaaaggttc cccggaagac aacgaacaga aacagctgtt cgtagagcag 9480
cacaaacact acctggacga gatcatcgaa cagatttctg aattttctaa acgtgtgatt 9540cacaaacact acctggacga gatcatcgaa cagatttctg aattttctaa acgtgtgatt 9540
ctggctgatg cgaatctgga taaagttctg tctgcctata acaagcatcg tgacaaaccg 9600ctggctgatg cgaatctgga taaagttctg tctgcctata acaagcatcg tgacaaaccg 9600
atccgcgaac aggctgagaa catcatccac ctgttcactc tgactaacct gggcgcgcca 9660atccgcgaac aggctgagaa catcatccac ctgttcactc tgactaacct gggcgcgcca 9660
gcggctttca agtactttga taccaccatt gaccgcaagc gttacacctc cactaaagaa 9720gcggctttca agtactttga taccaccatt gaccgcaagc gttacacctc cactaaagaa 9720
gtgctggacg cgactctgat ccaccagtcc atcaccggtc tgtacgagac ccgtatcgat 9780gtgctggacg cgactctgat ccaccagtcc atcaccggtc tgtacgagac ccgtatcgat 9780
ctgagccagc tgggcggtga caaaaggccg gcggccacga aaaaggccgg ccaggcaaaa 9840ctgagccagc tgggcggtga caaaaggccg gcggccacga aaaaggccgg ccaggcaaaa 9840
aagaaaaagt gacaaagccc gaaaggaagc tgagttggct gctgccaccg ctgagcaata 9900aagaaaaagt gacaaagccc gaaaggaagc tgagttggct gctgccaccg ctgagcaata 9900
actagcataa ccccttgggg cctctaaacg ggtcttgagg ggttttttgc tgaaaggagg 9960actagcataa ccccttgggg cctctaaacg ggtcttgagg ggttttttgc tgaaaggagg 9960
aactatatcc ggat 9974aactatatcc ggat 9974
<210> 2<210> 2
<211> 1547<211> 1547
<212> PRT<212> PRT
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 2<400> 2
Met Lys Gln Ser Thr Ile Ala Leu Ala Leu Leu Pro Leu Leu Phe ThrMet Lys Gln Ser Thr Ile Ala Leu Ala Leu Leu Pro Leu Leu Phe Thr
1 5 10 151 5 10 15
Pro Val Thr Lys Ala Met Ser Asp Lys Ile Ile His Leu Thr Asp AspPro Val Thr Lys Ala Met Ser Asp Lys Ile Ile His Leu Thr Asp Asp
20 25 30 20 25 30
Ser Phe Asp Thr Asp Val Leu Lys Ala Asp Gly Ala Ile Leu Val AspSer Phe Asp Thr Asp Val Leu Lys Ala Asp Gly Ala Ile Leu Val Asp
35 40 45 35 40 45
Phe Trp Ala Glu Trp Cys Gly Pro Cys Lys Met Ile Ala Pro Ile LeuPhe Trp Ala Glu Trp Cys Gly Pro Cys Lys Met Ile Ala Pro Ile Leu
50 55 60 50 55 60
Asp Glu Ile Ala Asp Glu Tyr Gln Gly Lys Leu Thr Val Ala Lys LeuAsp Glu Ile Ala Asp Glu Tyr Gln Gly Lys Leu Thr Val Ala Lys Leu
65 70 75 8065 70 75 80
Asn Ile Asp Gln Asn Pro Gly Thr Ala Pro Lys Tyr Gly Ile Arg GlyAsn Ile Asp Gln Asn Pro Gly Thr Ala Pro Lys Tyr Gly Ile Arg Gly
85 90 95 85 90 95
Ile Pro Thr Leu Leu Leu Phe Lys Asn Gly Glu Val Ala Ala Thr LysIle Pro Thr Leu Leu Leu Phe Lys Asn Gly Glu Val Ala Ala Thr Lys
100 105 110 100 105 110
Val Gly Ala Leu Ser Lys Gly Gln Leu Lys Glu Phe Leu Asp Ala AsnVal Gly Ala Leu Ser Lys Gly Gln Leu Lys Glu Phe Leu Asp Ala Asn
115 120 125 115 120 125
Leu Ala Gly Ser Gly Ser Gly His Met His His His His His His AspLeu Ala Gly Ser Gly Ser Gly His Met His His His His His His Asp
130 135 140 130 135 140
Asp Asp Asp Lys Met Pro Lys Lys Lys Arg Lys Val Gly Ile His GlyAsp Asp Asp Lys Met Pro Lys Lys Lys Arg Lys Val Gly Ile His Gly
145 150 155 160145 150 155 160
Val Pro Ala Ala Asp Lys Lys Tyr Ser Ile Gly Leu Asp Ile Gly ThrVal Pro Ala Ala Asp Lys Lys Tyr Ser Ile Gly Leu Asp Ile Gly Thr
165 170 175 165 170 175
Asn Ser Val Gly Trp Ala Val Ile Thr Asp Glu Tyr Lys Val Pro SerAsn Ser Val Gly Trp Ala Val Ile Thr Asp Glu Tyr Lys Val Pro Ser
180 185 190 180 185 190
Lys Lys Phe Lys Val Leu Gly Asn Thr Asp Arg His Ser Ile Lys LysLys Lys Phe Lys Val Leu Gly Asn Thr Asp Arg His Ser Ile Lys Lys
195 200 205 195 200 205
Asn Leu Ile Gly Ala Leu Leu Phe Asp Ser Gly Glu Thr Ala Glu AlaAsn Leu Ile Gly Ala Leu Leu Phe Asp Ser Gly Glu Thr Ala Glu Ala
210 215 220 210 215 220
Thr Arg Leu Lys Arg Thr Ala Arg Arg Arg Tyr Thr Arg Arg Lys AsnThr Arg Leu Lys Arg Thr Ala Arg Arg Arg Tyr Thr Arg Arg Lys Asn
225 230 235 240225 230 235 240
Arg Ile Cys Tyr Leu Gln Glu Ile Phe Ser Asn Glu Met Ala Lys ValArg Ile Cys Tyr Leu Gln Glu Ile Phe Ser Asn Glu Met Ala Lys Val
245 250 255 245 250 255
Asp Asp Ser Phe Phe His Arg Leu Glu Glu Ser Phe Leu Val Glu GluAsp Asp Ser Phe Phe His Arg Leu Glu Glu Ser Phe Leu Val Glu Glu
260 265 270 260 265 270
Asp Lys Lys His Glu Arg His Pro Ile Phe Gly Asn Ile Val Asp GluAsp Lys Lys His Glu Arg His Pro Ile Phe Gly Asn Ile Val Asp Glu
275 280 285 275 280 285
Val Ala Tyr His Glu Lys Tyr Pro Thr Ile Tyr His Leu Arg Lys LysVal Ala Tyr His Glu Lys Tyr Pro Thr Ile Tyr His Leu Arg Lys Lys
290 295 300 290 295 300
Leu Val Asp Ser Thr Asp Lys Ala Asp Leu Arg Leu Ile Tyr Leu AlaLeu Val Asp Ser Thr Asp Lys Ala Asp Leu Arg Leu Ile Tyr Leu Ala
305 310 315 320305 310 315 320
Leu Ala His Met Ile Lys Phe Arg Gly His Phe Leu Ile Glu Gly AspLeu Ala His Met Ile Lys Phe Arg Gly His Phe Leu Ile Glu Gly Asp
325 330 335 325 330 335
Leu Asn Pro Asp Asn Ser Asp Val Asp Lys Leu Phe Ile Gln Leu ValLeu Asn Pro Asp Asn Ser Asp Val Asp Lys Leu Phe Ile Gln Leu Val
340 345 350 340 345 350
Gln Thr Tyr Asn Gln Leu Phe Glu Glu Asn Pro Ile Asn Ala Ser GlyGln Thr Tyr Asn Gln Leu Phe Glu Glu Asn Pro Ile Asn Ala Ser Gly
355 360 365 355 360 365
Val Asp Ala Lys Ala Ile Leu Ser Ala Arg Leu Ser Lys Ser Arg ArgVal Asp Ala Lys Ala Ile Leu Ser Ala Arg Leu Ser Lys Ser Arg Arg
370 375 380 370 375 380
Leu Glu Asn Leu Ile Ala Gln Leu Pro Gly Glu Lys Lys Asn Gly LeuLeu Glu Asn Leu Ile Ala Gln Leu Pro Gly Glu Lys Lys Asn Gly Leu
385 390 395 400385 390 395 400
Phe Gly Asn Leu Ile Ala Leu Ser Leu Gly Leu Thr Pro Asn Phe LysPhe Gly Asn Leu Ile Ala Leu Ser Leu Gly Leu Thr Pro Asn Phe Lys
405 410 415 405 410 415
Ser Asn Phe Asp Leu Ala Glu Asp Ala Lys Leu Gln Leu Ser Lys AspSer Asn Phe Asp Leu Ala Glu Asp Ala Lys Leu Gln Leu Ser Lys Asp
420 425 430 420 425 430
Thr Tyr Asp Asp Asp Leu Asp Asn Leu Leu Ala Gln Ile Gly Asp GlnThr Tyr Asp Asp Asp Leu Asp Asn Leu Leu Ala Gln Ile Gly Asp Gln
435 440 445 435 440 445
Tyr Ala Asp Leu Phe Leu Ala Ala Lys Asn Leu Ser Asp Ala Ile LeuTyr Ala Asp Leu Phe Leu Ala Ala Lys Asn Leu Ser Asp Ala Ile Leu
450 455 460 450 455 460
Leu Ser Asp Ile Leu Arg Val Asn Thr Glu Ile Thr Lys Ala Pro LeuLeu Ser Asp Ile Leu Arg Val Asn Thr Glu Ile Thr Lys Ala Pro Leu
465 470 475 480465 470 475 480
Ser Ala Ser Met Ile Lys Arg Tyr Asp Glu His His Gln Asp Leu ThrSer Ala Ser Met Ile Lys Arg Tyr Asp Glu His His Gln Asp Leu Thr
485 490 495 485 490 495
Leu Leu Lys Ala Leu Val Arg Gln Gln Leu Pro Glu Lys Tyr Lys GluLeu Leu Lys Ala Leu Val Arg Gln Gln Leu Pro Glu Lys Tyr Lys Glu
500 505 510 500 505 510
Ile Phe Phe Asp Gln Ser Lys Asn Gly Tyr Ala Gly Tyr Ile Asp GlyIle Phe Phe Asp Gln Ser Lys Asn Gly Tyr Ala Gly Tyr Ile Asp Gly
515 520 525 515 520 525
Gly Ala Ser Gln Glu Glu Phe Tyr Lys Phe Ile Lys Pro Ile Leu GluGly Ala Ser Gln Glu Glu Phe Tyr Lys Phe Ile Lys Pro Ile Leu Glu
530 535 540 530 535 540
Lys Met Asp Gly Thr Glu Glu Leu Leu Val Lys Leu Asn Arg Glu AspLys Met Asp Gly Thr Glu Glu Leu Leu Val Lys Leu Asn Arg Glu Asp
545 550 555 560545 550 555 560
Leu Leu Arg Lys Gln Arg Thr Phe Asp Asn Gly Ser Ile Pro His GlnLeu Leu Arg Lys Gln Arg Thr Phe Asp Asn Gly Ser Ile Pro His Gln
565 570 575 565 570 575
Ile His Leu Gly Glu Leu His Ala Ile Leu Arg Arg Gln Glu Asp PheIle His Leu Gly Glu Leu His Ala Ile Leu Arg Arg Gln Glu Asp Phe
580 585 590 580 585 590
Tyr Pro Phe Leu Lys Asp Asn Arg Glu Lys Ile Glu Lys Ile Leu ThrTyr Pro Phe Leu Lys Asp Asn Arg Glu Lys Ile Glu Lys Ile Leu Thr
595 600 605 595 600 605
Phe Arg Ile Pro Tyr Tyr Val Gly Pro Leu Ala Arg Gly Asn Ser ArgPhe Arg Ile Pro Tyr Tyr Val Gly Pro Leu Ala Arg Gly Asn Ser Arg
610 615 620 610 615 620
Phe Ala Trp Met Thr Arg Lys Ser Glu Glu Thr Ile Thr Pro Trp AsnPhe Ala Trp Met Thr Arg Lys Ser Glu Glu Thr Ile Thr Pro Trp Asn
625 630 635 640625 630 635 640
Phe Glu Glu Val Val Asp Lys Gly Ala Ser Ala Gln Ser Phe Ile GluPhe Glu Glu Val Val Asp Lys Gly Ala Ser Ala Gln Ser Phe Ile Glu
645 650 655 645 650 655
Arg Met Thr Asn Phe Asp Lys Asn Leu Pro Asn Glu Lys Val Leu ProArg Met Thr Asn Phe Asp Lys Asn Leu Pro Asn Glu Lys Val Leu Pro
660 665 670 660 665 670
Lys His Ser Leu Leu Tyr Glu Tyr Phe Thr Val Tyr Asn Glu Leu ThrLys His Ser Leu Leu Tyr Glu Tyr Phe Thr Val Tyr Asn Glu Leu Thr
675 680 685 675 680 685
Lys Val Lys Tyr Val Thr Glu Gly Met Arg Lys Pro Ala Phe Leu SerLys Val Lys Tyr Val Thr Glu Gly Met Arg Lys Pro Ala Phe Leu Ser
690 695 700 690 695 700
Gly Glu Gln Lys Lys Ala Ile Val Asp Leu Leu Phe Lys Thr Asn ArgGly Glu Gln Lys Lys Ala Ile Val Asp Leu Leu Phe Lys Thr Asn Arg
705 710 715 720705 710 715 720
Lys Val Thr Val Lys Gln Leu Lys Glu Asp Tyr Phe Lys Lys Ile GluLys Val Thr Val Lys Gln Leu Lys Glu Asp Tyr Phe Lys Lys Ile Glu
725 730 735 725 730 735
Cys Phe Asp Ser Val Glu Ile Ser Gly Val Glu Asp Arg Phe Asn AlaCys Phe Asp Ser Val Glu Ile Ser Gly Val Glu Asp Arg Phe Asn Ala
740 745 750 740 745 750
Ser Leu Gly Thr Tyr His Asp Leu Leu Lys Ile Ile Lys Asp Lys AspSer Leu Gly Thr Tyr His Asp Leu Leu Lys Ile Ile Lys Asp Lys Asp
755 760 765 755 760 765
Phe Leu Asp Asn Glu Glu Asn Glu Asp Ile Leu Glu Asp Ile Val LeuPhe Leu Asp Asn Glu Glu Asn Glu Asp Ile Leu Glu Asp Ile Val Leu
770 775 780 770 775 780
Thr Leu Thr Leu Phe Glu Asp Arg Glu Met Ile Glu Glu Arg Leu LysThr Leu Thr Leu Phe Glu Asp Arg Glu Met Ile Glu Glu Arg Leu Lys
785 790 795 800785 790 795 800
Thr Tyr Ala His Leu Phe Asp Asp Lys Val Met Lys Gln Leu Lys ArgThr Tyr Ala His Leu Phe Asp Asp Lys Val Met Lys Gln Leu Lys Arg
805 810 815 805 810 815
Arg Arg Tyr Thr Gly Trp Gly Arg Leu Ser Arg Lys Leu Ile Asn GlyArg Arg Tyr Thr Gly Trp Gly Arg Leu Ser Arg Lys Leu Ile Asn Gly
820 825 830 820 825 830
Ile Arg Asp Lys Gln Ser Gly Lys Thr Ile Leu Asp Phe Leu Lys SerIle Arg Asp Lys Gln Ser Gly Lys Thr Ile Leu Asp Phe Leu Lys Ser
835 840 845 835 840 845
Asp Gly Phe Ala Asn Arg Asn Phe Met Gln Leu Ile His Asp Asp SerAsp Gly Phe Ala Asn Arg Asn Phe Met Gln Leu Ile His Asp Asp Ser
850 855 860 850 855 860
Leu Thr Phe Lys Glu Asp Ile Gln Lys Ala Gln Val Ser Gly Gln GlyLeu Thr Phe Lys Glu Asp Ile Gln Lys Ala Gln Val Ser Gly Gln Gly
865 870 875 880865 870 875 880
Asp Ser Leu His Glu His Ile Ala Asn Leu Ala Gly Ser Pro Ala IleAsp Ser Leu His Glu His Ile Ala Asn Leu Ala Gly Ser Pro Ala Ile
885 890 895 885 890 895
Lys Lys Gly Ile Leu Gln Thr Val Lys Val Val Asp Glu Leu Val LysLys Lys Gly Ile Leu Gln Thr Val Lys Val Val Asp Glu Leu Val Lys
900 905 910 900 905 910
Val Met Gly Arg His Lys Pro Glu Asn Ile Val Ile Glu Met Ala ArgVal Met Gly Arg His Lys Pro Glu Asn Ile Val Ile Glu Met Ala Arg
915 920 925 915 920 925
Glu Asn Gln Thr Thr Gln Lys Gly Gln Lys Asn Ser Arg Glu Arg MetGlu Asn Gln Thr Thr Gln Lys Gly Gln Lys Asn Ser Arg Glu Arg Met
930 935 940 930 935 940
Lys Arg Ile Glu Glu Gly Ile Lys Glu Leu Gly Ser Gln Ile Leu LysLys Arg Ile Glu Glu Gly Ile Lys Glu Leu Gly Ser Gln Ile Leu Lys
945 950 955 960945 950 955 960
Glu His Pro Val Glu Asn Thr Gln Leu Gln Asn Glu Lys Leu Tyr LeuGlu His Pro Val Glu Asn Thr Gln Leu Gln Asn Glu Lys Leu Tyr Leu
965 970 975 965 970 975
Tyr Tyr Leu Gln Asn Gly Arg Asp Met Tyr Val Asp Gln Glu Leu AspTyr Tyr Leu Gln Asn Gly Arg Asp Met Tyr Val Asp Gln Glu Leu Asp
980 985 990 980 985 990
Ile Asn Arg Leu Ser Asp Tyr Asp Val Asp His Ile Val Pro Gln SerIle Asn Arg Leu Ser Asp Tyr Asp Val Asp His Ile Val Pro Gln Ser
995 1000 1005 995 1000 1005
Phe Leu Lys Asp Asp Ser Ile Asp Asn Lys Val Leu Thr Arg Ser AspPhe Leu Lys Asp Asp Ser Ile Asp Asn Lys Val Leu Thr Arg Ser Asp
1010 1015 1020 1010 1015 1020
Lys Asn Arg Gly Lys Ser Asp Asn Val Pro Ser Glu Glu Val Val LysLys Asn Arg Gly Lys Ser Asp Asn Val Pro Ser Glu Glu Val Val Lys
1025 1030 1035 10401025 1030 1035 1040
Lys Met Lys Asn Tyr Trp Arg Gln Leu Leu Asn Ala Lys Leu Ile ThrLys Met Lys Asn Tyr Trp Arg Gln Leu Leu Asn Ala Lys Leu Ile Thr
1045 1050 1055 1045 1050 1055
Gln Arg Lys Phe Asp Asn Leu Thr Lys Ala Glu Arg Gly Gly Leu SerGln Arg Lys Phe Asp Asn Leu Thr Lys Ala Glu Arg Gly Gly Leu Ser
1060 1065 1070 1060 1065 1070
Glu Leu Asp Lys Ala Gly Phe Ile Lys Arg Gln Leu Val Glu Thr ArgGlu Leu Asp Lys Ala Gly Phe Ile Lys Arg Gln Leu Val Glu Thr Arg
1075 1080 1085 1075 1080 1085
Gln Ile Thr Lys His Val Ala Gln Ile Leu Asp Ser Arg Met Asn ThrGln Ile Thr Lys His Val Ala Gln Ile Leu Asp Ser Arg Met Asn Thr
1090 1095 1100 1090 1095 1100
Lys Tyr Asp Glu Asn Asp Lys Leu Ile Arg Glu Val Lys Val Ile ThrLys Tyr Asp Glu Asn Asp Lys Leu Ile Arg Glu Val Lys Val Ile Thr
1105 1110 1115 11201105 1110 1115 1120
Leu Lys Ser Lys Leu Val Ser Asp Phe Arg Lys Asp Phe Gln Phe TyrLeu Lys Ser Lys Leu Val Ser Asp Phe Arg Lys Asp Phe Gln Phe Tyr
1125 1130 1135 1125 1130 1135
Lys Val Arg Glu Ile Asn Asn Tyr His His Ala His Asp Ala Tyr LeuLys Val Arg Glu Ile Asn Asn Tyr His His Ala His Asp Ala Tyr Leu
1140 1145 1150 1140 1145 1150
Asn Ala Val Val Gly Thr Ala Leu Ile Lys Lys Tyr Pro Lys Leu GluAsn Ala Val Val Gly Thr Ala Leu Ile Lys Lys Tyr Pro Lys Leu Glu
1155 1160 1165 1155 1160 1165
Ser Glu Phe Val Tyr Gly Asp Tyr Lys Val Tyr Asp Val Arg Lys MetSer Glu Phe Val Tyr Gly Asp Tyr Lys Val Tyr Asp Val Arg Lys Met
1170 1175 1180 1170 1175 1180
Ile Ala Lys Ser Glu Gln Glu Ile Gly Lys Ala Thr Ala Lys Tyr PheIle Ala Lys Ser Glu Gln Glu Ile Gly Lys Ala Thr Ala Lys Tyr Phe
1185 1190 1195 12001185 1190 1195 1200
Phe Tyr Ser Asn Ile Met Asn Phe Phe Lys Thr Glu Ile Thr Leu AlaPhe Tyr Ser Asn Ile Met Asn Phe Phe Lys Thr Glu Ile Thr Leu Ala
1205 1210 1215 1205 1210 1215
Asn Gly Glu Ile Arg Lys Arg Pro Leu Ile Glu Thr Asn Gly Glu ThrAsn Gly Glu Ile Arg Lys Arg Pro Leu Ile Glu Thr Asn Gly Glu Thr
1220 1225 1230 1220 1225 1230
Gly Glu Ile Val Trp Asp Lys Gly Arg Asp Phe Ala Thr Val Arg LysGly Glu Ile Val Trp Asp Lys Gly Arg Asp Phe Ala Thr Val Arg Lys
1235 1240 1245 1235 1240 1245
Val Leu Ser Met Pro Gln Val Asn Ile Val Lys Lys Thr Glu Val GlnVal Leu Ser Met Pro Gln Val Asn Ile Val Lys Lys Thr Glu Val Gln
1250 1255 1260 1250 1255 1260
Thr Gly Gly Phe Ser Lys Glu Ser Ile Leu Pro Lys Arg Asn Ser AspThr Gly Gly Phe Ser Lys Glu Ser Ile Leu Pro Lys Arg Asn Ser Asp
1265 1270 1275 12801265 1270 1275 1280
Lys Leu Ile Ala Arg Lys Lys Asp Trp Asp Pro Lys Lys Tyr Gly GlyLys Leu Ile Ala Arg Lys Lys Asp Trp Asp Pro Lys Lys Tyr Gly Gly
1285 1290 1295 1285 1290 1295
Phe Asp Ser Pro Thr Val Ala Tyr Ser Val Leu Val Val Ala Lys ValPhe Asp Ser Pro Thr Val Ala Tyr Ser Val Leu Val Val Ala Lys Val
1300 1305 1310 1300 1305 1310
Glu Lys Gly Lys Ser Lys Lys Leu Lys Ser Val Lys Glu Leu Leu GlyGlu Lys Gly Lys Ser Lys Lys Leu Lys Ser Val Lys Glu Leu Leu Gly
1315 1320 1325 1315 1320 1325
Ile Thr Ile Met Glu Arg Ser Ser Phe Glu Lys Asn Pro Ile Asp PheIle Thr Ile Met Glu Arg Ser Ser Phe Glu Lys Asn Pro Ile Asp Phe
1330 1335 1340 1330 1335 1340
Leu Glu Ala Lys Gly Tyr Lys Glu Val Lys Lys Asp Leu Ile Ile LysLeu Glu Ala Lys Gly Tyr Lys Glu Val Lys Lys Asp Leu Ile Ile Lys
1345 1350 1355 13601345 1350 1355 1360
Leu Pro Lys Tyr Ser Leu Phe Glu Leu Glu Asn Gly Arg Lys Arg MetLeu Pro Lys Tyr Ser Leu Phe Glu Leu Glu Asn Gly Arg Lys Arg Met
1365 1370 1375 1365 1370 1375
Leu Ala Ser Ala Gly Glu Leu Gln Lys Gly Asn Glu Leu Ala Leu ProLeu Ala Ser Ala Gly Glu Leu Gln Lys Gly Asn Glu Leu Ala Leu Pro
1380 1385 1390 1380 1385 1390
Ser Lys Tyr Val Asn Phe Leu Tyr Leu Ala Ser His Tyr Glu Lys LeuSer Lys Tyr Val Asn Phe Leu Tyr Leu Ala Ser His Tyr Glu Lys Leu
1395 1400 1405 1395 1400 1405
Lys Gly Ser Pro Glu Asp Asn Glu Gln Lys Gln Leu Phe Val Glu GlnLys Gly Ser Pro Glu Asp Asn Glu Gln Lys Gln Leu Phe Val Glu Gln
1410 1415 1420 1410 1415 1420
His Lys His Tyr Leu Asp Glu Ile Ile Glu Gln Ile Ser Glu Phe SerHis Lys His Tyr Leu Asp Glu Ile Ile Glu Gln Ile Ser Glu Phe Ser
1425 1430 1435 14401425 1430 1435 1440
Lys Arg Val Ile Leu Ala Asp Ala Asn Leu Asp Lys Val Leu Ser AlaLys Arg Val Ile Leu Ala Asp Ala Asn Leu Asp Lys Val Leu Ser Ala
1445 1450 1455 1445 1450 1455
Tyr Asn Lys His Arg Asp Lys Pro Ile Arg Glu Gln Ala Glu Asn IleTyr Asn Lys His Arg Asp Lys Pro Ile Arg Glu Gln Ala Glu Asn Ile
1460 1465 1470 1460 1465 1470
Ile His Leu Phe Thr Leu Thr Asn Leu Gly Ala Pro Ala Ala Phe LysIle His Leu Phe Thr Leu Thr Asn Leu Gly Ala Pro Ala Ala Phe Lys
1475 1480 1485 1475 1480 1485
Tyr Phe Asp Thr Thr Ile Asp Arg Lys Arg Tyr Thr Ser Thr Lys GluTyr Phe Asp Thr Thr Ile Asp Arg Lys Arg Tyr Thr Ser Thr Lys Glu
1490 1495 1500 1490 1495 1500
Val Leu Asp Ala Thr Leu Ile His Gln Ser Ile Thr Gly Leu Tyr GluVal Leu Asp Ala Thr Leu Ile His Gln Ser Ile Thr Gly Leu Tyr Glu
1505 1510 1515 15201505 1510 1515 1520
Thr Arg Ile Asp Leu Ser Gln Leu Gly Gly Asp Lys Arg Pro Ala AlaThr Arg Ile Asp Leu Ser Gln Leu Gly Gly Asp Lys Arg Pro Ala Ala
1525 1530 1535 1525 1530 1535
Thr Lys Lys Ala Gly Gln Ala Lys Lys Lys LysThr Lys Lys Ala Gly Gln Ala Lys Lys Lys Lys
1540 1545 1540 1545
<210> 3<210> 3
<211> 1399<211> 1399
<212> PRT<212> PRT
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 3<400> 3
Met Pro Lys Lys Lys Arg Lys Val Gly Ile His Gly Val Pro Ala AlaMet Pro Lys Lys Lys Arg Lys Val Gly Ile His Gly Val Pro Ala Ala
1 5 10 151 5 10 15
Asp Lys Lys Tyr Ser Ile Gly Leu Asp Ile Gly Thr Asn Ser Val GlyAsp Lys Lys Tyr Ser Ile Gly Leu Asp Ile Gly Thr Asn Ser Val Gly
20 25 30 20 25 30
Trp Ala Val Ile Thr Asp Glu Tyr Lys Val Pro Ser Lys Lys Phe LysTrp Ala Val Ile Thr Asp Glu Tyr Lys Val Pro Ser Lys Lys Phe Lys
35 40 45 35 40 45
Val Leu Gly Asn Thr Asp Arg His Ser Ile Lys Lys Asn Leu Ile GlyVal Leu Gly Asn Thr Asp Arg His Ser Ile Lys Lys Asn Leu Ile Gly
50 55 60 50 55 60
Ala Leu Leu Phe Asp Ser Gly Glu Thr Ala Glu Ala Thr Arg Leu LysAla Leu Leu Phe Asp Ser Gly Glu Thr Ala Glu Ala Thr Arg Leu Lys
65 70 75 8065 70 75 80
Arg Thr Ala Arg Arg Arg Tyr Thr Arg Arg Lys Asn Arg Ile Cys TyrArg Thr Ala Arg Arg Arg Tyr Thr Arg Arg Lys Asn Arg Ile Cys Tyr
85 90 95 85 90 95
Leu Gln Glu Ile Phe Ser Asn Glu Met Ala Lys Val Asp Asp Ser PheLeu Gln Glu Ile Phe Ser Asn Glu Met Ala Lys Val Asp Asp Ser Phe
100 105 110 100 105 110
Phe His Arg Leu Glu Glu Ser Phe Leu Val Glu Glu Asp Lys Lys HisPhe His Arg Leu Glu Glu Ser Phe Leu Val Glu Glu Asp Lys Lys His
115 120 125 115 120 125
Glu Arg His Pro Ile Phe Gly Asn Ile Val Asp Glu Val Ala Tyr HisGlu Arg His Pro Ile Phe Gly Asn Ile Val Asp Glu Val Ala Tyr His
130 135 140 130 135 140
Glu Lys Tyr Pro Thr Ile Tyr His Leu Arg Lys Lys Leu Val Asp SerGlu Lys Tyr Pro Thr Ile Tyr His Leu Arg Lys Lys Leu Val Asp Ser
145 150 155 160145 150 155 160
Thr Asp Lys Ala Asp Leu Arg Leu Ile Tyr Leu Ala Leu Ala His MetThr Asp Lys Ala Asp Leu Arg Leu Ile Tyr Leu Ala Leu Ala His Met
165 170 175 165 170 175
Ile Lys Phe Arg Gly His Phe Leu Ile Glu Gly Asp Leu Asn Pro AspIle Lys Phe Arg Gly His Phe Leu Ile Glu Gly Asp Leu Asn Pro Asp
180 185 190 180 185 190
Asn Ser Asp Val Asp Lys Leu Phe Ile Gln Leu Val Gln Thr Tyr AsnAsn Ser Asp Val Asp Lys Leu Phe Ile Gln Leu Val Gln Thr Tyr Asn
195 200 205 195 200 205
Gln Leu Phe Glu Glu Asn Pro Ile Asn Ala Ser Gly Val Asp Ala LysGln Leu Phe Glu Glu Asn Pro Ile Asn Ala Ser Gly Val Asp Ala Lys
210 215 220 210 215 220
Ala Ile Leu Ser Ala Arg Leu Ser Lys Ser Arg Arg Leu Glu Asn LeuAla Ile Leu Ser Ala Arg Leu Ser Lys Ser Arg Arg Leu Glu Asn Leu
225 230 235 240225 230 235 240
Ile Ala Gln Leu Pro Gly Glu Lys Lys Asn Gly Leu Phe Gly Asn LeuIle Ala Gln Leu Pro Gly Glu Lys Lys Asn Gly Leu Phe Gly Asn Leu
245 250 255 245 250 255
Ile Ala Leu Ser Leu Gly Leu Thr Pro Asn Phe Lys Ser Asn Phe AspIle Ala Leu Ser Leu Gly Leu Thr Pro Asn Phe Lys Ser Asn Phe Asp
260 265 270 260 265 270
Leu Ala Glu Asp Ala Lys Leu Gln Leu Ser Lys Asp Thr Tyr Asp AspLeu Ala Glu Asp Ala Lys Leu Gln Leu Ser Lys Asp Thr Tyr Asp Asp
275 280 285 275 280 285
Asp Leu Asp Asn Leu Leu Ala Gln Ile Gly Asp Gln Tyr Ala Asp LeuAsp Leu Asp Asn Leu Leu Ala Gln Ile Gly Asp Gln Tyr Ala Asp Leu
290 295 300 290 295 300
Phe Leu Ala Ala Lys Asn Leu Ser Asp Ala Ile Leu Leu Ser Asp IlePhe Leu Ala Ala Lys Asn Leu Ser Asp Ala Ile Leu Leu Ser Asp Ile
305 310 315 320305 310 315 320
Leu Arg Val Asn Thr Glu Ile Thr Lys Ala Pro Leu Ser Ala Ser MetLeu Arg Val Asn Thr Glu Ile Thr Lys Ala Pro Leu Ser Ala Ser Met
325 330 335 325 330 335
Ile Lys Arg Tyr Asp Glu His His Gln Asp Leu Thr Leu Leu Lys AlaIle Lys Arg Tyr Asp Glu His His Gln Asp Leu Thr Leu Leu Lys Ala
340 345 350 340 345 350
Leu Val Arg Gln Gln Leu Pro Glu Lys Tyr Lys Glu Ile Phe Phe AspLeu Val Arg Gln Gln Leu Pro Glu Lys Tyr Lys Glu Ile Phe Phe Asp
355 360 365 355 360 365
Gln Ser Lys Asn Gly Tyr Ala Gly Tyr Ile Asp Gly Gly Ala Ser GlnGln Ser Lys Asn Gly Tyr Ala Gly Tyr Ile Asp Gly Gly Ala Ser Gln
370 375 380 370 375 380
Glu Glu Phe Tyr Lys Phe Ile Lys Pro Ile Leu Glu Lys Met Asp GlyGlu Glu Phe Tyr Lys Phe Ile Lys Pro Ile Leu Glu Lys Met Asp Gly
385 390 395 400385 390 395 400
Thr Glu Glu Leu Leu Val Lys Leu Asn Arg Glu Asp Leu Leu Arg LysThr Glu Glu Leu Leu Val Lys Leu Asn Arg Glu Asp Leu Leu Arg Lys
405 410 415 405 410 415
Gln Arg Thr Phe Asp Asn Gly Ser Ile Pro His Gln Ile His Leu GlyGln Arg Thr Phe Asp Asn Gly Ser Ile Pro His Gln Ile His Leu Gly
420 425 430 420 425 430
Glu Leu His Ala Ile Leu Arg Arg Gln Glu Asp Phe Tyr Pro Phe LeuGlu Leu His Ala Ile Leu Arg Arg Gln Glu Asp Phe Tyr Pro Phe Leu
435 440 445 435 440 445
Lys Asp Asn Arg Glu Lys Ile Glu Lys Ile Leu Thr Phe Arg Ile ProLys Asp Asn Arg Glu Lys Ile Glu Lys Ile Leu Thr Phe Arg Ile Pro
450 455 460 450 455 460
Tyr Tyr Val Gly Pro Leu Ala Arg Gly Asn Ser Arg Phe Ala Trp MetTyr Tyr Val Gly Pro Leu Ala Arg Gly Asn Ser Arg Phe Ala Trp Met
465 470 475 480465 470 475 480
Thr Arg Lys Ser Glu Glu Thr Ile Thr Pro Trp Asn Phe Glu Glu ValThr Arg Lys Ser Glu Glu Thr Ile Thr Pro Trp Asn Phe Glu Glu Val
485 490 495 485 490 495
Val Asp Lys Gly Ala Ser Ala Gln Ser Phe Ile Glu Arg Met Thr AsnVal Asp Lys Gly Ala Ser Ala Gln Ser Phe Ile Glu Arg Met Thr Asn
500 505 510 500 505 510
Phe Asp Lys Asn Leu Pro Asn Glu Lys Val Leu Pro Lys His Ser LeuPhe Asp Lys Asn Leu Pro Asn Glu Lys Val Leu Pro Lys His Ser Leu
515 520 525 515 520 525
Leu Tyr Glu Tyr Phe Thr Val Tyr Asn Glu Leu Thr Lys Val Lys TyrLeu Tyr Glu Tyr Phe Thr Val Tyr Asn Glu Leu Thr Lys Val Lys Tyr
530 535 540 530 535 540
Val Thr Glu Gly Met Arg Lys Pro Ala Phe Leu Ser Gly Glu Gln LysVal Thr Glu Gly Met Arg Lys Pro Ala Phe Leu Ser Gly Glu Gln Lys
545 550 555 560545 550 555 560
Lys Ala Ile Val Asp Leu Leu Phe Lys Thr Asn Arg Lys Val Thr ValLys Ala Ile Val Asp Leu Leu Phe Lys Thr Asn Arg Lys Val Thr Val
565 570 575 565 570 575
Lys Gln Leu Lys Glu Asp Tyr Phe Lys Lys Ile Glu Cys Phe Asp SerLys Gln Leu Lys Glu Asp Tyr Phe Lys Lys Ile Glu Cys Phe Asp Ser
580 585 590 580 585 590
Val Glu Ile Ser Gly Val Glu Asp Arg Phe Asn Ala Ser Leu Gly ThrVal Glu Ile Ser Gly Val Glu Asp Arg Phe Asn Ala Ser Leu Gly Thr
595 600 605 595 600 605
Tyr His Asp Leu Leu Lys Ile Ile Lys Asp Lys Asp Phe Leu Asp AsnTyr His Asp Leu Leu Lys Ile Ile Lys Asp Lys Asp Phe Leu Asp Asn
610 615 620 610 615 620
Glu Glu Asn Glu Asp Ile Leu Glu Asp Ile Val Leu Thr Leu Thr LeuGlu Glu Asn Glu Asp Ile Leu Glu Asp Ile Val Leu Thr Leu Thr Leu
625 630 635 640625 630 635 640
Phe Glu Asp Arg Glu Met Ile Glu Glu Arg Leu Lys Thr Tyr Ala HisPhe Glu Asp Arg Glu Met Ile Glu Glu Arg Leu Lys Thr Tyr Ala His
645 650 655 645 650 655
Leu Phe Asp Asp Lys Val Met Lys Gln Leu Lys Arg Arg Arg Tyr ThrLeu Phe Asp Asp Lys Val Met Lys Gln Leu Lys Arg Arg Arg Tyr Thr
660 665 670 660 665 670
Gly Trp Gly Arg Leu Ser Arg Lys Leu Ile Asn Gly Ile Arg Asp LysGly Trp Gly Arg Leu Ser Arg Lys Leu Ile Asn Gly Ile Arg Asp Lys
675 680 685 675 680 685
Gln Ser Gly Lys Thr Ile Leu Asp Phe Leu Lys Ser Asp Gly Phe AlaGln Ser Gly Lys Thr Ile Leu Asp Phe Leu Lys Ser Asp Gly Phe Ala
690 695 700 690 695 700
Asn Arg Asn Phe Met Gln Leu Ile His Asp Asp Ser Leu Thr Phe LysAsn Arg Asn Phe Met Gln Leu Ile His Asp Asp Ser Leu Thr Phe Lys
705 710 715 720705 710 715 720
Glu Asp Ile Gln Lys Ala Gln Val Ser Gly Gln Gly Asp Ser Leu HisGlu Asp Ile Gln Lys Ala Gln Val Ser Gly Gln Gly Asp Ser Leu His
725 730 735 725 730 735
Glu His Ile Ala Asn Leu Ala Gly Ser Pro Ala Ile Lys Lys Gly IleGlu His Ile Ala Asn Leu Ala Gly Ser Pro Ala Ile Lys Lys Gly Ile
740 745 750 740 745 750
Leu Gln Thr Val Lys Val Val Asp Glu Leu Val Lys Val Met Gly ArgLeu Gln Thr Val Lys Val Val Asp Glu Leu Val Lys Val Met Gly Arg
755 760 765 755 760 765
His Lys Pro Glu Asn Ile Val Ile Glu Met Ala Arg Glu Asn Gln ThrHis Lys Pro Glu Asn Ile Val Ile Glu Met Ala Arg Glu Asn Gln Thr
770 775 780 770 775 780
Thr Gln Lys Gly Gln Lys Asn Ser Arg Glu Arg Met Lys Arg Ile GluThr Gln Lys Gly Gln Lys Asn Ser Arg Glu Arg Met Lys Arg Ile Glu
785 790 795 800785 790 795 800
Glu Gly Ile Lys Glu Leu Gly Ser Gln Ile Leu Lys Glu His Pro ValGlu Gly Ile Lys Glu Leu Gly Ser Gln Ile Leu Lys Glu His Pro Val
805 810 815 805 810 815
Glu Asn Thr Gln Leu Gln Asn Glu Lys Leu Tyr Leu Tyr Tyr Leu GlnGlu Asn Thr Gln Leu Gln Asn Glu Lys Leu Tyr Leu Tyr Tyr Leu Gln
820 825 830 820 825 830
Asn Gly Arg Asp Met Tyr Val Asp Gln Glu Leu Asp Ile Asn Arg LeuAsn Gly Arg Asp Met Tyr Val Asp Gln Glu Leu Asp Ile Asn Arg Leu
835 840 845 835 840 845
Ser Asp Tyr Asp Val Asp His Ile Val Pro Gln Ser Phe Leu Lys AspSer Asp Tyr Asp Val Asp His Ile Val Pro Gln Ser Phe Leu Lys Asp
850 855 860 850 855 860
Asp Ser Ile Asp Asn Lys Val Leu Thr Arg Ser Asp Lys Asn Arg GlyAsp Ser Ile Asp Asn Lys Val Leu Thr Arg Ser Asp Lys Asn Arg Gly
865 870 875 880865 870 875 880
Lys Ser Asp Asn Val Pro Ser Glu Glu Val Val Lys Lys Met Lys AsnLys Ser Asp Asn Val Pro Ser Glu Glu Val Val Lys Lys Met Lys Asn
885 890 895 885 890 895
Tyr Trp Arg Gln Leu Leu Asn Ala Lys Leu Ile Thr Gln Arg Lys PheTyr Trp Arg Gln Leu Leu Asn Ala Lys Leu Ile Thr Gln Arg Lys Phe
900 905 910 900 905 910
Asp Asn Leu Thr Lys Ala Glu Arg Gly Gly Leu Ser Glu Leu Asp LysAsp Asn Leu Thr Lys Ala Glu Arg Gly Gly Leu Ser Glu Leu Asp Lys
915 920 925 915 920 925
Ala Gly Phe Ile Lys Arg Gln Leu Val Glu Thr Arg Gln Ile Thr LysAla Gly Phe Ile Lys Arg Gln Leu Val Glu Thr Arg Gln Ile Thr Lys
930 935 940 930 935 940
His Val Ala Gln Ile Leu Asp Ser Arg Met Asn Thr Lys Tyr Asp GluHis Val Ala Gln Ile Leu Asp Ser Arg Met Asn Thr Lys Tyr Asp Glu
945 950 955 960945 950 955 960
Asn Asp Lys Leu Ile Arg Glu Val Lys Val Ile Thr Leu Lys Ser LysAsn Asp Lys Leu Ile Arg Glu Val Lys Val Ile Thr Leu Lys Ser Lys
965 970 975 965 970 975
Leu Val Ser Asp Phe Arg Lys Asp Phe Gln Phe Tyr Lys Val Arg GluLeu Val Ser Asp Phe Arg Lys Asp Phe Gln Phe Tyr Lys Val Arg Glu
980 985 990 980 985 990
Ile Asn Asn Tyr His His Ala His Asp Ala Tyr Leu Asn Ala Val ValIle Asn Asn Tyr His His Ala His Asp Ala Tyr Leu Asn Ala Val Val
995 1000 1005 995 1000 1005
Gly Thr Ala Leu Ile Lys Lys Tyr Pro Lys Leu Glu Ser Glu Phe ValGly Thr Ala Leu Ile Lys Lys Tyr Pro Lys Leu Glu Ser Glu Phe Val
1010 1015 1020 1010 1015 1020
Tyr Gly Asp Tyr Lys Val Tyr Asp Val Arg Lys Met Ile Ala Lys SerTyr Gly Asp Tyr Lys Val Tyr Asp Val Arg Lys Met Ile Ala Lys Ser
1025 1030 1035 10401025 1030 1035 1040
Glu Gln Glu Ile Gly Lys Ala Thr Ala Lys Tyr Phe Phe Tyr Ser AsnGlu Gln Glu Ile Gly Lys Ala Thr Ala Lys Tyr Phe Phe Tyr Ser Asn
1045 1050 1055 1045 1050 1055
Ile Met Asn Phe Phe Lys Thr Glu Ile Thr Leu Ala Asn Gly Glu IleIle Met Asn Phe Phe Lys Thr Glu Ile Thr Leu Ala Asn Gly Glu Ile
1060 1065 1070 1060 1065 1070
Arg Lys Arg Pro Leu Ile Glu Thr Asn Gly Glu Thr Gly Glu Ile ValArg Lys Arg Pro Leu Ile Glu Thr Asn Gly Glu Thr Gly Glu Ile Val
1075 1080 1085 1075 1080 1085
Trp Asp Lys Gly Arg Asp Phe Ala Thr Val Arg Lys Val Leu Ser MetTrp Asp Lys Gly Arg Asp Phe Ala Thr Val Arg Lys Val Leu Ser Met
1090 1095 1100 1090 1095 1100
Pro Gln Val Asn Ile Val Lys Lys Thr Glu Val Gln Thr Gly Gly PhePro Gln Val Asn Ile Val Lys Lys Lys Thr Glu Val Gln Thr Gly Gly Phe
1105 1110 1115 11201105 1110 1115 1120
Ser Lys Glu Ser Ile Leu Pro Lys Arg Asn Ser Asp Lys Leu Ile AlaSer Lys Glu Ser Ile Leu Pro Lys Arg Asn Ser Asp Lys Leu Ile Ala
1125 1130 1135 1125 1130 1135
Arg Lys Lys Asp Trp Asp Pro Lys Lys Tyr Gly Gly Phe Asp Ser ProArg Lys Lys Asp Trp Asp Pro Lys Lys Tyr Gly Gly Phe Asp Ser Pro
1140 1145 1150 1140 1145 1150
Thr Val Ala Tyr Ser Val Leu Val Val Ala Lys Val Glu Lys Gly LysThr Val Ala Tyr Ser Val Leu Val Val Ala Lys Val Glu Lys Gly Lys
1155 1160 1165 1155 1160 1165
Ser Lys Lys Leu Lys Ser Val Lys Glu Leu Leu Gly Ile Thr Ile MetSer Lys Lys Leu Lys Ser Val Lys Glu Leu Leu Gly Ile Thr Ile Met
1170 1175 1180 1170 1175 1180
Glu Arg Ser Ser Phe Glu Lys Asn Pro Ile Asp Phe Leu Glu Ala LysGlu Arg Ser Ser Phe Glu Lys Asn Pro Ile Asp Phe Leu Glu Ala Lys
1185 1190 1195 12001185 1190 1195 1200
Gly Tyr Lys Glu Val Lys Lys Asp Leu Ile Ile Lys Leu Pro Lys TyrGly Tyr Lys Glu Val Lys Lys Asp Leu Ile Ile Lys Leu Pro Lys Tyr
1205 1210 1215 1205 1210 1215
Ser Leu Phe Glu Leu Glu Asn Gly Arg Lys Arg Met Leu Ala Ser AlaSer Leu Phe Glu Leu Glu Asn Gly Arg Lys Arg Met Leu Ala Ser Ala
1220 1225 1230 1220 1225 1230
Gly Glu Leu Gln Lys Gly Asn Glu Leu Ala Leu Pro Ser Lys Tyr ValGly Glu Leu Gln Lys Gly Asn Glu Leu Ala Leu Pro Ser Lys Tyr Val
1235 1240 1245 1235 1240 1245
Asn Phe Leu Tyr Leu Ala Ser His Tyr Glu Lys Leu Lys Gly Ser ProAsn Phe Leu Tyr Leu Ala Ser His Tyr Glu Lys Leu Lys Gly Ser Pro
1250 1255 1260 1250 1255 1260
Glu Asp Asn Glu Gln Lys Gln Leu Phe Val Glu Gln His Lys His TyrGlu Asp Asn Glu Gln Lys Gln Leu Phe Val Glu Gln His Lys His Tyr
1265 1270 1275 12801265 1270 1275 1280
Leu Asp Glu Ile Ile Glu Gln Ile Ser Glu Phe Ser Lys Arg Val IleLeu Asp Glu Ile Ile Glu Gln Ile Ser Glu Phe Ser Lys Arg Val Ile
1285 1290 1295 1285 1290 1295
Leu Ala Asp Ala Asn Leu Asp Lys Val Leu Ser Ala Tyr Asn Lys HisLeu Ala Asp Ala Asn Leu Asp Lys Val Leu Ser Ala Tyr Asn Lys His
1300 1305 1310 1300 1305 1310
Arg Asp Lys Pro Ile Arg Glu Gln Ala Glu Asn Ile Ile His Leu PheArg Asp Lys Pro Ile Arg Glu Gln Ala Glu Asn Ile Ile His Leu Phe
1315 1320 1325 1315 1320 1325
Thr Leu Thr Asn Leu Gly Ala Pro Ala Ala Phe Lys Tyr Phe Asp ThrThr Leu Thr Asn Leu Gly Ala Pro Ala Ala Phe Lys Tyr Phe Asp Thr
1330 1335 1340 1330 1335 1340
Thr Ile Asp Arg Lys Arg Tyr Thr Ser Thr Lys Glu Val Leu Asp AlaThr Ile Asp Arg Lys Arg Tyr Thr Ser Thr Lys Glu Val Leu Asp Ala
1345 1350 1355 13601345 1350 1355 1360
Thr Leu Ile His Gln Ser Ile Thr Gly Leu Tyr Glu Thr Arg Ile AspThr Leu Ile His Gln Ser Ile Thr Gly Leu Tyr Glu Thr Arg Ile Asp
1365 1370 1375 1365 1370 1375
Leu Ser Gln Leu Gly Gly Asp Lys Arg Pro Ala Ala Thr Lys Lys AlaLeu Ser Gln Leu Gly Gly Asp Lys Arg Pro Ala Ala Thr Lys Lys Ala
1380 1385 1390 1380 1385 1390
Gly Gln Ala Lys Lys Lys LysGly Gln Ala Lys Lys Lys Lys Lys
1395 1395
<210> 4<210> 4
<211> 225<211> 225
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 4<400> 4
ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60
taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120
ataggagagc acagtcagcc tggcggtttt agagctagaa atagcaagtt aaaataaggc 180ataggagagc acagtcagcc tggcggtttt agagctagaa atagcaagtt aaaataaggc 180
tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225
<210> 5<210> 5
<211> 225<211> 225
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 5<400> 5
ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60
taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120
ataggcttcc agaattggat ctccggtttt agagctagaa atagcaagtt aaaataaggc 180ataggcttcc agaattggat ctccggtttt agagctagaa atagcaagtt aaaataaggc 180
tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225
<210> 6<210> 6
<211> 102<211> 102
<212> RNA<212> RNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 6<400> 6
ggagagcaca gucagccugg cgguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60ggagagcaca gucagccugg cgguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60
uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102
<210> 7<210> 7
<211> 102<211> 102
<212> RNA<212> RNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 7<400> 7
ggcuuccaga auuggaucuc cgguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60ggcuuccaga auuggaucuc cgguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60
uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102
<210> 8<210> 8
<211> 531<211> 531
<212> PRT<212> PRT
<213> Sus scrofa<213> Sus scrofa
<400> 8<400> 8
Met Leu Leu Ala Ala Leu Tyr Cys Leu Leu Trp Thr Phe Gln Thr SerMet Leu Leu Ala Ala Leu Tyr Cys Leu Leu Trp Thr Phe Gln Thr Ser
1 5 10 151 5 10 15
Ala Gly His Phe Pro Arg Ala Cys Ala Ser Ser Lys Asn Leu Met GluAla Gly His Phe Pro Arg Ala Cys Ala Ser Ser Lys Asn Leu Met Glu
20 25 30 20 25 30
Lys Glu Cys Cys Pro Pro Trp Gly Gly Asp Gly Ser Pro Cys Gly GlnLys Glu Cys Cys Pro Pro Trp Gly Gly Asp Gly Ser Pro Cys Gly Gln
35 40 45 35 40 45
Leu Ser Gly Arg Gly Ser Cys Gln Asp Ile Ile Leu Ser Lys Ala ProLeu Ser Gly Arg Gly Ser Cys Gln Asp Ile Ile Leu Ser Lys Ala Pro
50 55 60 50 55 60
Leu Gly Pro Gln Phe Pro Phe Thr Gly Val Asp Glu Arg Glu Ser TrpLeu Gly Pro Gln Phe Pro Phe Thr Gly Val Asp Glu Arg Glu Ser Trp
65 70 75 8065 70 75 80
Pro Ser Val Phe Tyr Asn Arg Thr Cys Gln Cys Phe Gly Asn Phe MetPro Ser Val Phe Tyr Asn Arg Thr Cys Gln Cys Phe Gly Asn Phe Met
85 90 95 85 90 95
Gly Phe Asn Cys Gly Ser Cys Lys Phe Gly Phe Gln Gly Pro Asn CysGly Phe Asn Cys Gly Ser Cys Lys Phe Gly Phe Gln Gly Pro Asn Cys
100 105 110 100 105 110
Thr Glu Arg Arg Leu Leu Val Arg Arg Asn Ile Phe Asp Leu Ser ValThr Glu Arg Arg Leu Leu Val Arg Arg Asn Ile Phe Asp Leu Ser Val
115 120 125 115 120 125
Pro Glu Lys Asn Lys Phe Leu Ala Tyr Leu Thr Leu Ala Lys His ThrPro Glu Lys Asn Lys Phe Leu Ala Tyr Leu Thr Leu Ala Lys His Thr
130 135 140 130 135 140
Thr Ser Pro Asp Phe Val Ile Pro Thr Gly Thr Tyr Gly Gln Met AsnThr Ser Pro Asp Phe Val Ile Pro Thr Gly Thr Tyr Gly Gln Met Asn
145 150 155 160145 150 155 160
Asn Gly Ser Thr Pro Met Phe Ser Asp Ile Asn Ile Tyr Asp Leu PheAsn Gly Ser Thr Pro Met Phe Ser Asp Ile Asn Ile Tyr Asp Leu Phe
165 170 175 165 170 175
Val Trp Met His Tyr Tyr Val Ser Arg Asp Thr Leu Leu Gly Gly SerVal Trp Met His Tyr Tyr Val Ser Arg Asp Thr Leu Leu Gly Gly Ser
180 185 190 180 185 190
Glu Ile Trp Arg Asp Ile Asp Phe Ala His Glu Ala Pro Gly Phe LeuGlu Ile Trp Arg Asp Ile Asp Phe Ala His Glu Ala Pro Gly Phe Leu
195 200 205 195 200 205
Pro Trp His Arg Leu Phe Leu Leu Val Trp Glu Gln Glu Ile Gln LysPro Trp His Arg Leu Phe Leu Leu Val Trp Glu Gln Glu Ile Gln Lys
210 215 220 210 215 220
Leu Thr Gly Asp Glu Asn Phe Thr Ile Pro Tyr Trp Asp Trp Arg AspLeu Thr Gly Asp Glu Asn Phe Thr Ile Pro Tyr Trp Asp Trp Arg Asp
225 230 235 240225 230 235 240
Ala Glu Asn Cys Asp Ile Cys Thr Asp Glu Tyr Met Gly Gly Arg AsnAla Glu Asn Cys Asp Ile Cys Thr Asp Glu Tyr Met Gly Gly Arg Asn
245 250 255 245 250 255
Pro Ala Asn Pro Asn Leu Leu Ser Pro Ala Ser Phe Phe Ser Ser TrpPro Ala Asn Pro Asn Leu Leu Ser Pro Ala Ser Phe Phe Ser Ser Trp
260 265 270 260 265 270
Gln Ile Ile Cys Ser Arg Leu Glu Glu Tyr Asn Ser Arg Gln Ala LeuGln Ile Ile Cys Ser Arg Leu Glu Glu Tyr Asn Ser Arg Gln Ala Leu
275 280 285 275 280 285
Cys Asn Gly Thr Pro Glu Gly Pro Leu Leu Arg Asn Pro Gly Asn HisCys Asn Gly Thr Pro Glu Gly Pro Leu Leu Arg Asn Pro Gly Asn His
290 295 300 290 295 300
Asp Lys Ser Arg Thr Pro Arg Leu Pro Ser Ser Ala Asp Val Glu PheAsp Lys Ser Arg Thr Pro Arg Leu Pro Ser Ser Ala Asp Val Glu Phe
305 310 315 320305 310 315 320
Cys Leu Ser Leu Thr Gln Tyr Glu Ser Gly Ser Met Asp Lys Ser AlaCys Leu Ser Leu Thr Gln Tyr Glu Ser Gly Ser Met Asp Lys Ser Ala
325 330 335 325 330 335
Asn Phe Ser Phe Arg Asn Thr Leu Glu Gly Phe Ala Ser Pro Leu ThrAsn Phe Ser Phe Arg Asn Thr Leu Glu Gly Phe Ala Ser Pro Leu Thr
340 345 350 340 345 350
Gly Ile Ala Asp Ala Ser Gln Ser Ser Met His Asn Ala Leu His IleGly Ile Ala Asp Ala Ser Gln Ser Ser Met His Asn Ala Leu His Ile
355 360 365 355 360 365
Tyr Met Asn Gly Thr Met Ser Gln Val Gln Gly Ser Ala Asn Asp ProTyr Met Asn Gly Thr Met Ser Gln Val Gln Gly Ser Ala Asn Asp Pro
370 375 380 370 375 380
Ile Phe Leu Leu His His Ala Phe Val Asp Ser Ile Phe Glu Gln TrpIle Phe Leu Leu His His Ala Phe Val Asp Ser Ile Phe Glu Gln Trp
385 390 395 400385 390 395 400
Leu Arg Lys His His Pro Leu Leu Glu Val Tyr Pro Glu Ala Asn AlaLeu Arg Lys His His Pro Leu Leu Glu Val Tyr Pro Glu Ala Asn Ala
405 410 415 405 410 415
Pro Ile Gly His Asn Arg Glu Ser Tyr Met Val Pro Phe Ile Pro LeuPro Ile Gly His Asn Arg Glu Ser Tyr Met Val Pro Phe Ile Pro Leu
420 425 430 420 425 430
Tyr Arg Asn Gly Asp Phe Phe Ile Ser Ser Arg Asp Leu Gly Tyr AspTyr Arg Asn Gly Asp Phe Phe Ile Ser Ser Arg Asp Leu Gly Tyr Asp
435 440 445 435 440 445
Tyr Ser Tyr Leu Gln Asp Ser Glu Pro Asp Phe Phe Gln Asp Tyr IleTyr Ser Tyr Leu Gln Asp Ser Glu Pro Asp Phe Phe Gln Asp Tyr Ile
450 455 460 450 455 460
Lys Pro Tyr Leu Glu Gln Ala Ser Arg Ile Trp Pro Trp Leu Leu GlyLys Pro Tyr Leu Glu Gln Ala Ser Arg Ile Trp Pro Trp Leu Leu Gly
465 470 475 480465 470 475 480
Ala Ala Val Val Gly Ser Val Leu Thr Ala Val Leu Gly Gly Ile ThrAla Ala Val Val Gly Ser Val Leu Thr Ala Val Leu Gly Gly Ile Thr
485 490 495 485 490 495
Arg Arg Leu Cys Cys Arg Arg Lys Arg Lys Arg Leu Pro Glu Glu LysArg Arg Leu Cys Cys Arg Arg Lys Arg Lys Arg Leu Pro Glu Glu Lys
500 505 510 500 505 510
Gln Pro Leu Leu Met Glu Lys Glu Asp Tyr Asp Ser Leu Leu Tyr GlnGln Pro Leu Leu Met Glu Lys Glu Asp Tyr Asp Ser Leu Leu Tyr Gln
515 520 525 515 520 525
Ser His LeuSer His Leu
530 530
<210> 9<210> 9
<211> 869<211> 869
<212> DNA<212> DNA
<213> Sus scrofa<213> Sus scrofa
<400> 9<400> 9
tgtggctcaa ttaacaagct caaacagacc ttgtgagaac tagaggaaga atgctcctgg 60tgtggctcaa ttaacaagct caaacagacc ttgtgagaac tagaggaaga atgctcctgg 60
ctgctttgta ctgcctgctc tggactttcc agacttccgc cggacacttc cctcgagcct 120ctgctttgta ctgcctgctc tggactttcc agacttccgc cggacacttc cctcgagcct 120
gtgcctcctc caagaacctg atggagaagg aatgctgccc accctgggga ggtgatggga 180gtgcctcctc caagaacctg atggagaagg aatgctgccc accctgggga ggtgatggga 180
gtccctgtgg ccagctctca ggcaggggtt cctgtcagga catcattctg tccaaggcac 240gtccctgtgg ccagctctca ggcaggggtt cctgtcagga catcattctg tccaaggcac 240
ccctgggacc tcagttcccc ttcaccgggg tggatgaacg ggagtcttgg ccctccgtct 300ccctgggacc tcagttcccc ttcaccgggg tggatgaacg ggagtcttgg ccctccgtct 300
tttacaacag gacctgccag tgctttggca acttcatggg atttaactgt ggaagttgta 360tttacaacag gacctgccag tgctttggca acttcatggg atttaactgt ggaagttgta 360
agtttggctt tcagggaccc aactgcacag agaggcgact tttggtcaga agaaacatct 420agtttggctt tcagggaccc aactgcacag agaggcgact tttggtcaga agaaacatct 420
ttgatttgag tgtgccagag aagaacaaat ttcttgccta cctcacttta gcgaaacata 480ttgatttgag tgtgccagag aagaacaaat ttcttgccta cctcacttta gcgaaacata 480
ctaccagccc agacttcgtc atccccacag gcacctatgg ccaaatgaat aatggatcaa 540ctaccagccc agacttcgtc atccccacag gcacctatgg ccaaatgaat aatggatcaa 540
cacccatgtt tagtgacatc aacatttatg acctctttgt ctggatgcat tattacgtgt 600cacccatgtt tagtgacatc aacatttatg acctctttgt ctggatgcat tattacgtgt 600
ctagggacac actacttggg ggctctgaaa tctggagaga cattgatttt gctcatgaag 660ctagggacac actacttggg ggctctgaaa tctggagaga cattgatttt gctcatgaag 660
caccaggttt cctgccttgg catcgactct tcttgctggt atgggaacaa gaaatccaga 720caccaggttt cctgccttgg catcgactct tcttgctggt atgggaacaa gaaatccaga 720
agctgacagg ggatgagaac ttcactattc catactggga ttggcgagat gcagaaaatt 780agctgacagg ggatgagaac ttcactattc catactggga ttggcgagat gcagaaaatt 780
gtgacatttg cacagatgag tacatgggag gacgcaaccc tgcaaaccct aatctactca 840gtgacatttg cacagatgag tacatgggag gacgcaaccc tgcaaaccct aatctactca 840
gcccagcatc cttcttctcc tcttggcag 869gcccagcatc cttcttctcc tcttggcag 869
<210> 10<210> 10
<211> 100<211> 100
<212> RNA<212> RNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 10<400> 10
accucaguuc cccuucaccg guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60accucaguuc cccuucaccg guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 11<210> 11
<211> 100<211> 100
<212> RNA<212> RNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 11<400> 11
guccuguugu aaaagacgga guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60guccuguugu aaaagacgga guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 12<210> 12
<211> 100<211> 100
<212> RNA<212> RNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 12<400> 12
agacucccgu ucauccaccc guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60agacucccgu ucauccaccc guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 13<210> 13
<211> 100<211> 100
<212> RNA<212> RNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 13<400> 13
gguccuguug uaaaagacgg guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60gguccuguug uaaaagacgg guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60
cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100
<210> 14<210> 14
<211> 225<211> 225
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 14<400> 14
ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60
taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120
ataggacctc agttcccctt caccggtttt agagctagaa atagcaagtt aaaataaggc 180ataggacctc agttcccctt caccggtttt agagctagaa atagcaagtt aaaataaggc 180
tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225
<210> 15<210> 15
<211> 225<211> 225
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 15<400> 15
ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60
taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120
atagggtcct gttgtaaaag acggagtttt agagctagaa atagcaagtt aaaataaggc 180atagggtcct gttgtaaaag acggagtttt agagctagaa atagcaagtt aaaataaggc 180
tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225
<210> 16<210> 16
<211> 102<211> 102
<212> RNA<212> RNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 16<400> 16
ggaccucagu uccccuucac cgguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60ggaccucagu uccccuucac cgguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60
uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102
<210> 17<210> 17
<211> 102<211> 102
<212> RNA<212> RNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 17<400> 17
ggguccuguu guaaaagacg gaguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60ggguccuguu guaaaagacg gaguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60
uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102
<210> 18<210> 18
<211> 126<211> 126
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 18<400> 18
ggacatcatt ctgtccaagg cacccctggg acctcagttc cccttcaccg gagtggatga 60ggacatcatt ctgtccaagg cacccctggg acctcagttc cccttcaccg gagtggatga 60
actggagtct tggccctcag tcttttacaa caggacctgc cagtgctttg gcaacttcat 120actggagtct tggccctcag tcttttacaa caggacctgc cagtgctttg gcaacttcat 120
gggatt 126gggatt 126
<210> 19<210> 19
<211> 126<211> 126
<212> DNA<212> DNA
<213> Sus scrofa<213> Sus scrofa
<400> 19<400> 19
ggacatcatt ctgtccaagg cacccctggg acctcagttc cccttcaccg gggtggatga 60ggacatcatt ctgtccaagg cacccctggg acctcagttc cccttcaccg gggtggatga 60
acgggagtct tggccctccg tcttttacaa caggacctgc cagtgctttg gcaacttcat 120acgggagtct tggccctccg tcttttacaa caggacctgc cagtgctttg gcaacttcat 120
gggatt 126gggatt 126
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Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2011063005A2 (en) * | 2009-11-17 | 2011-05-26 | Advanced Cell Technology, Inc. | Methods of producing human rpe cells and pharmaceutical preparations of human rpe cells |
CN111373041A (en) * | 2017-09-26 | 2020-07-03 | 伊利诺伊大学理事会 | CRISPR/CAS systems and methods for genome editing and regulation of transcription |
CN112442515A (en) * | 2019-09-02 | 2021-03-05 | 南京启真基因工程有限公司 | Application of gRNA target combination in construction of hemophilia model pig cell line |
-
2021
- 2021-07-08 CN CN202110774036.5A patent/CN115232834A/en active Pending
Patent Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2011063005A2 (en) * | 2009-11-17 | 2011-05-26 | Advanced Cell Technology, Inc. | Methods of producing human rpe cells and pharmaceutical preparations of human rpe cells |
CN111373041A (en) * | 2017-09-26 | 2020-07-03 | 伊利诺伊大学理事会 | CRISPR/CAS systems and methods for genome editing and regulation of transcription |
CN112442515A (en) * | 2019-09-02 | 2021-03-05 | 南京启真基因工程有限公司 | Application of gRNA target combination in construction of hemophilia model pig cell line |
Non-Patent Citations (2)
Title |
---|
IGHOVIE F. ONOJAFE ET AL.,: "Nitisinone improves eye and skin pigmentation defects in a mouse model of oculocutaneous albinism", THE JOURNAL OF CLINICAL INVESTIGATION, vol. 121, no. 10, 31 October 2011 (2011-10-31), pages 3914 - 3923 * |
MA, X ET AL.,: "Cas9[Plant multiplex genome editing vector pYLCRISPR/Cas9Pubi-H]", GENBANK ACCESSION:AKE81011, 5 May 2015 (2015-05-05), pages 1 - 2 * |
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