CN115043939A - A kind of Omp16 specific nanobody for detecting Brucella, expression vector and application thereof - Google Patents
A kind of Omp16 specific nanobody for detecting Brucella, expression vector and application thereof Download PDFInfo
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- CN115043939A CN115043939A CN202210720902.7A CN202210720902A CN115043939A CN 115043939 A CN115043939 A CN 115043939A CN 202210720902 A CN202210720902 A CN 202210720902A CN 115043939 A CN115043939 A CN 115043939A
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Abstract
Description
技术领域technical field
本发明涉及免疫检测技术领域,具体涉及一种检测布鲁氏菌的Omp16特异性纳米抗体、表达载体及其应用。The invention relates to the technical field of immunodetection, in particular to an Omp16-specific nanobody for detecting Brucella, an expression vector and an application thereof.
背景技术Background technique
布鲁氏菌病(简称“布病”)是一种由布鲁氏菌引起的慢性多器官损伤性人畜共患传染病,WHO将布鲁氏菌病视为“世界范围内流行最广泛的人畜共患病,但也是最易被人们所忽视的7种重要传染病之一”。布病主要是通过直接或间接接触染病动物或动物产品而感染。人类患布病后,会引起发热、肌肉和关节疼痛等,严重者完全丧失劳动能力;家畜感染布病则引起流产和不育,给养殖业造成巨大的经济损失,严重威胁人类食品安全和公共卫生安全。Brucellosis ("brucellosis" for short) is a chronic multi-organ damage zoonotic infectious disease caused by Brucella. comorbidity, but also one of the seven most important infectious diseases that are most easily overlooked." Brucellosis is mainly acquired through direct or indirect contact with infected animals or animal products. When humans suffer from brucellosis, it will cause fever, muscle and joint pain, etc., and in severe cases, they will lose their ability to work completely; livestock infected with brucellosis will cause abortion and infertility, causing huge economic losses to the breeding industry, and a serious threat to human food safety and public health. health and safety.
准确诊断是布病防控极为重要的环节。布病诊断又分为血清学诊断和病原学诊断,相对于常用的布病血清学诊断方法,布病病原学诊断对实验室生物安全级别和实验人员要求都比较高。目前布病病原学诊断方法主要包括细菌分离、生化鉴定分型、核酸检测等,其中核酸检测又有AMOS-PCR、Bruce-ladder PCR、real-time PCR、MLVA等方法。而上述病原学诊断方法的开展都需要在专业布病实验室完成,操作人员必须经过专门培训,一次检测至少需要2小时以上。因此开发针对布病的病原学现场快速诊断方法十分必要。Accurate diagnosis is an extremely important part of brucellosis prevention and control. Brucellosis diagnosis is further divided into serological diagnosis and etiological diagnosis. Compared with the commonly used brucellosis serological diagnosis method, brucellosis etiological diagnosis has higher requirements on laboratory biosafety level and laboratory personnel. At present, the etiological diagnosis methods of brucellosis mainly include bacterial isolation, biochemical identification and typing, nucleic acid detection, etc. Among them, nucleic acid detection includes AMOS-PCR, Bruce-ladder PCR, real-time PCR, MLVA and other methods. The development of the above-mentioned etiological diagnosis methods needs to be completed in a professional brucellosis laboratory, the operators must undergo special training, and a test takes at least 2 hours. Therefore, it is necessary to develop a rapid on-site diagnostic method for the etiology of brucellosis.
发明内容SUMMARY OF THE INVENTION
为解决上述问题,本发明提供了一种检测布鲁氏菌的Omp16特异性纳米抗体、表达载体及其应用,此纳米抗体能够特异性识别布鲁氏菌外膜蛋白OMP16,能够有效阻断布鲁氏菌阳性血清与Omp16的结合,因此,利用此抗体,可以建立阻断ELISA、胶体金等检测方法对布鲁氏菌病进行检测。In order to solve the above-mentioned problems, the present invention provides an Omp16-specific nanobody for detecting Brucella, an expression vector and an application thereof. The nanobody can specifically recognize the Brucella outer membrane protein OMP16, and can effectively block the cloth The positive serum of L. rubella binds to Omp16. Therefore, using this antibody, detection methods such as blocking ELISA and colloidal gold can be established to detect brucellosis.
为实现上述目的,本发明采取的技术方案为:To achieve the above object, the technical scheme adopted in the present invention is:
一种检测布鲁氏菌的Omp16特异性纳米抗体,该特异性纳米抗体通过以下步骤制备:A kind of Omp16 specific nano antibody of detecting Brucella, this specific nano antibody is prepared by following steps:
(1)Omp16的诱导表达(1) Inducible expression of Omp16
将实验室保存的pGEX4T-1-Omp16质粒转化至BL21(DE3)中,挑取单克隆活化至对数生长期(OD600nm至0.6~0.8之间),冷却至室温,加入终浓度为1mM的IPTG,转入22℃,200r/min培养16h,诱导表达蛋白;6000r/min常温离心10min,弃掉上清,菌体使用1/20体积的PBS重悬,以超声3s,间歇3s超声破碎菌体,12000r/min,4℃离心10min,分离上清和沉淀;The pGEX4T-1-Omp16 plasmid stored in the laboratory was transformed into BL21(DE3), the single clone was picked and activated to the logarithmic growth phase (OD600nm to 0.6-0.8), cooled to room temperature, and IPTG with a final concentration of 1mM was added. , transferred to 22°C, cultured at 200r/min for 16h to induce protein expression; centrifuged at 6000r/min for 10min at room temperature, discarded the supernatant, resuspended the cells with 1/20 volume of PBS, and disrupted the cells by ultrasonication for 3s, intermittently for 3s , 12000r/min, centrifuge at 4°C for 10min, separate supernatant and precipitate;
(2)Omp16蛋白的纯化(2) Purification of Omp16 protein
取超声后上清,使用0.45μM滤器过滤除杂质,放置于冰上备用;将取1mL GSTresin至层析柱中,带介质自然沉降,加入10倍体积PBS平衡柱子;加入过滤后的表达上清,调整流速为0.5mL/min,吸附目的蛋白;上样结束后,加入10-20倍体积的PBS洗脱杂蛋白,至流出液再280nm吸光度接近0,使用洗脱缓冲液(50mM Tris-Cl,10mM还原型谷胱甘肽)洗脱目的蛋白,控制流速为0.5mL/min,收集流出液,SDS-PAGE检测流出液的蛋白含量,并将蛋白透析至PBS溶液中,测定蛋白浓度,分装冻存至-80℃冰箱;Take the supernatant after sonication, use a 0.45 μM filter to remove impurities, and place it on ice for later use; take 1 mL of GSTresin into the chromatography column, settle naturally with the medium, and add 10 times the volume of PBS to equilibrate the column; add the filtered expression supernatant , adjust the flow rate to 0.5mL/min, and adsorb the target protein; after loading, add 10-20 times the volume of PBS to elute the impurity protein until the effluent absorbance at 280nm is close to 0, and use elution buffer (50mM Tris-Cl , 10mM reduced glutathione) to elute the target protein, control the flow rate to be 0.5mL/min, collect the effluent, detect the protein content of the effluent by SDS-PAGE, and dialyze the protein into PBS solution, measure the protein concentration, and divide the Store in freezer at -80°C;
(3)Omp16特异性噬菌体的淘选(3) Panning of Omp16-specific phage
将纯化的Omp16蛋白用PBS缓冲液稀释至200μg/mL,包被至96孔酶标板上,每孔100μL,共包被3个孔,同时设置PBS对照孔,4℃包被过夜;弃去包被液,PBS’T洗板三次后,加入200μL 2.5%脱脂奶粉,37℃封闭2h;弃去封闭液,加入2.5%脱脂奶粉稀释的噬菌体5×1010PFU/孔,37℃孵育2h;弃去噬菌体上清,使用PBS’T洗板10次,PBS洗板5次,每孔加入100μl新鲜配制的0.1M三乙胺,室温静置10min,吸出洗脱液迅速用等体积1MTris-HCl(pH=7.4)中和洗脱物;取400μL淘选产物按照文库救援的方法救援淘选噬菌体,同时检测噬菌体滴度;将救援后的噬菌体按照同样的方法进行第二轮、第三轮淘选,第二轮、第三轮淘选Omp16的包被浓度分别为100、50μg/mL;The purified Omp16 protein was diluted with PBS buffer to 200 μg/mL, and coated on a 96-well microtiter plate with 100 μL per well, a total of 3 wells were coated, and a PBS control well was set at the same time, and coated overnight at 4°C; discarded Coating solution, after washing the plate three times with PBS'T, add 200 μL 2.5% nonfat milk powder, block at 37°C for 2h; discard the blocking solution, add 5×10 10 PFU/well of phage diluted with 2.5% nonfat milk powder, and incubate at 37°C for 2h; Discard the phage supernatant, wash the
(4)纳米抗体粗提物的制备(4) Preparation of Nanobody Crude Extract
随机挑取96个最后一轮淘选噬菌体单克隆至100μL LB/AMP-GLU培养基中,37℃200r/min培养8h;每个克隆取10μL培养物转接至500μL TB培养基中,37℃培养至对数生长期,加入10μL 100mM IPTG,继续培养12-14h;12000r/min离心2min,收集菌体,-80℃、37℃反复冻融三次裂解菌体,加入500μL PBS 4℃孵育30min重悬菌体,离心后上清即为粗提物。Randomly pick 96 phage monoclones from the final round of panning into 100 μL LB/AMP-GLU medium, and cultivate at 200 r/min at 37°C for 8 hours; 10 μL of each clone was transferred to 500 μL TB medium, 37°C Cultivate to logarithmic growth phase, add 10 μL 100mM IPTG, continue to culture for 12-14 h; centrifuge at 12,000 r/min for 2 min, collect the cells, freeze-thaw at -80 °C and 37 °C for three times to lyse the cells, add 500 μL PBS, incubate at 4 °C for 30 min. The bacterial cells were suspended, and the supernatant after centrifugation was the crude extract.
进一步地,步骤(3)中,文库救援的方法包括如下步骤:Further, in step (3), the method for library rescue comprises the following steps:
取100μL噬菌体展示文库,接种于100mL 2×YT/AMP-GLU培养基(含有1μg/mL氨苄青霉素和2%葡萄糖)中,37℃,200r/min培养至对数生长期;加入20个MOI剂量的辅助噬菌体M13K07,37℃静置30min,2800g室温离心10min,弃上清,沉淀使用200mL 2×YT/AMP-KAN(含有1μg/mL氨苄青霉素和卡那霉素)培养基重悬,37℃,200r/min培养14-16h;3800g,4℃离心30min,收集上清,加入1/5体积的PEG/NaCl(200g PEG6000,146g NaCl加水溶解,定容至1L),混匀,冰上静置6-8h;3800g,4℃离心30min弃上清,加入1mL PBS溶液重悬沉淀,4℃摇床孵育过夜,使噬菌体颗粒充分溶解,12000g 4℃离心15min,收集上清,并使用对数生长期的TG1测定救援噬菌体滴度。Take 100 μL of the phage display library, inoculate it in 100 mL of 2×YT/AMP-GLU medium (containing 1 μg/mL ampicillin and 2% glucose), and cultivate it to logarithmic growth phase at 37°C, 200 r/min; add 20 MOI doses The helper phage M13K07 was left at 37°C for 30min, centrifuged at 2800g for 10min at room temperature, the supernatant was discarded, and the pellet was resuspended in
本发明还公开了上述的一种检测布鲁氏菌的Omp16特异性纳米抗体的表达载体,通过以下方法构建:The invention also discloses the above-mentioned expression vector for detecting the Omp16 specific nanobody of Brucella, which is constructed by the following methods:
将NbA4的基因序列通过Pst I和Not I两个酶切位点插入至pCMV-HRP表达载体中,构建重组质粒,PCR和测序验证重组质粒的正确性,提取无内毒素的pCMV-NbA4-HRP重组质粒,使用Lipo8000(碧云天),12孔板每孔配制如下反应体系:Lipo80001.6μL,pCMV-NbA4-HRP 1μg,Opti-mem 50μL,将质粒转染至融合度为60-70%的HEK-293T细胞中,48h后收取上清检测NbA4-HRP的表达及活性。The gene sequence of NbA4 was inserted into the pCMV-HRP expression vector through the two restriction sites of Pst I and Not I, the recombinant plasmid was constructed, the correctness of the recombinant plasmid was verified by PCR and sequencing, and the endotoxin-free pCMV-NbA4-HRP was extracted For recombinant plasmids, Lipo8000 (Biyuntian) was used, and the following reaction system was prepared in each well of a 12-well plate: Lipo80001.6 μL, pCMV-NbA4-
本发明所述的一种检测布鲁氏菌的Omp16特异性纳米抗体的表达载体可用于构建基于NbA4-HRP阻断ELISA方法检测牛血清布鲁氏菌抗体,具体地,通过以下步骤构建:The expression vector of a kind of Omp16 specific nano-antibody that detects Brucella of the present invention can be used for constructing the detection of bovine serum Brucella antibody based on NbA4-HRP blocking ELISA method, specifically, constructs through the following steps:
(1)抗原包被:设置Omp16浓度为1、2、4μg/mL,以100μL/孔包被至96孔酶标板上,4℃孵育过夜;(1) Antigen coating: set the concentration of Omp16 to 1, 2, and 4 μg/mL, coat 100 μL/well on a 96-well ELISA plate, and incubate at 4°C overnight;
(2)封闭:PBS’T溶液洗板三次,每孔加入200μL 2.5%的脱脂奶粉,37℃封闭1h;(2) Blocking: Wash the plate three times with PBS'T solution, add 200 μL of 2.5% nonfat dry milk to each well, and block at 37°C for 1 hour;
(3)孵育一抗:将收集的NbA4-HRP表达上清使用封闭液进行2、4、6、8、16、32、64倍梯度稀释,加入至酶标板中,37℃孵育1h;(3) Incubation with primary antibody: The collected NbA4-HRP expression supernatant was diluted 2, 4, 6, 8, 16, 32, and 64-fold with blocking solution, added to the ELISA plate, and incubated at 37°C for 1 h;
(4)显色和终止:加入100μLTMB溶液室温显色10min,50μL 3M H2SO4终止反应后,读取450nm吸光值,分析试验结果,确定阻断ELISA的抗原抗体使用浓度。(4) Color development and termination: Add 100 μL of TMB solution for color development at room temperature for 10 min, 50 μL of 3M H 2 SO 4 to terminate the reaction, read the absorbance at 450 nm, analyze the test results, and determine the concentration of antigen and antibody that blocks ELISA.
检测时,将Omp16稀释至2μg/mL,包被至96孔酶标板中,4℃过夜;加入2.5%的脱脂奶粉,37℃封闭1h。按照血清1∶20,HPR-NbA4 1∶4的比例将血清和纳米抗体混合,每孔100μL加入至酶标板中,37℃孵育1h,洗板后加入TMB和3M H2SO4显色,检测450nm处吸光度。During detection, Omp16 was diluted to 2 μg/mL, coated on a 96-well microtiter plate, overnight at 4°C; 2.5% nonfat milk powder was added, and blocked at 37°C for 1 h. Serum and nanobodies were mixed at a ratio of 1:20 for serum and 1:4 for HPR-NbA4, and 100 μL per well was added to the microtiter plate, incubated at 37°C for 1 h, and after washing the plate, TMB and 3M H2SO4 were added for color development, and detected at 450 nm. absorbance.
本发明的纳米抗体能够特异性识别布鲁氏菌外膜蛋白OMP16,能够有效阻断布鲁氏菌阳性血清与Omp16的结合,因此,利用此抗体,可以建立阻断ELISA、胶体金等检测方法对布鲁氏菌病进行检测。The nanobody of the present invention can specifically recognize Brucella outer membrane protein OMP16, and can effectively block the binding of Brucella positive serum and Omp16. Therefore, by using this antibody, detection methods such as blocking ELISA and colloidal gold can be established. Test for brucellosis.
附图说明Description of drawings
通过阅读参照以下附图对非限制性实施例所作的详细描述,本发明的其它特征、目的和优点将会变得更明显:Other features, objects and advantages of the present invention will become more apparent by reading the detailed description of non-limiting embodiments with reference to the following drawings:
图1原核表达的Omp16经GST亲和层析纯化结果;Fig. 1 Result of purification of prokaryotic expressed Omp16 by GST affinity chromatography;
图中:泳道1:未诱导菌液;泳道2:IPTG诱导后沉淀;泳道3:IPTG诱导后上清;泳道4:洗脱杂蛋白;泳道5-9:洗脱目的蛋白。In the figure: lane 1: uninduced bacterial solution; lane 2: precipitate after IPTG induction; lane 3: supernatant after IPTG induction; lane 4: eluted impurity protein; lane 5-9: eluted target protein.
图2为间接ELISA检测骆驼血清中Omp16抗体滴度结果。Figure 2 shows the results of indirect ELISA detection of Omp16 antibody titers in camel serum.
图3为Omp16特异性噬菌体三轮淘选滴度检测结果。Figure 3 shows the results of three rounds of panning titers for Omp16-specific phages.
图4为间接ELlSA检测Omp16特异性纳米抗体粗提物。Fig. 4 is indirect ELlSA detection Omp16 specific Nanobody crude extract.
图5为Omp16特异性纳米抗体NbA4序列分析。Figure 5 is the sequence analysis of the Omp16-specific Nanobody NbA4.
图6为HRP-NbA4与Omp16的结合滴度测定结果。Figure 6 shows the results of the determination of the binding titer of HRP-NbA4 to Omp16.
图7为基于HRP-NbA4的阻断ELISA检测牛血清中Omp16抗体。Figure 7 shows the detection of Omp16 antibody in bovine serum by blocking ELISA based on HRP-NbA4.
具体实施方式Detailed ways
下面结合具体实施例对本发明进行详细说明。以下实施例将有助于本领域的技术人员进一步理解本发明,但不以任何形式限制本发明。应当指出的是,对本领域的普通技术人员来说,在不脱离本发明构思的前提下,还可以做出若干变形和改进。这些都属于本发明的保护范围。The present invention will be described in detail below with reference to specific embodiments. The following examples will help those skilled in the art to further understand the present invention, but do not limit the present invention in any form. It should be noted that, for those skilled in the art, several modifications and improvements can be made without departing from the concept of the present invention. These all belong to the protection scope of the present invention.
实施例Example
1.Omp16重组蛋白的表达、纯化及骆驼血清中抗体滴度测定1. Expression and purification of Omp16 recombinant protein and determination of antibody titer in camel serum
(1)Omp16的诱导表达(1) Inducible expression of Omp16
将实验室保存的pGEX4T-1-Omp16质粒转化至BL21(DE3)中,挑取单克隆活化至对数生长期(OD600nm至0.6~0.8之间),冷却至室温,加入终浓度为1mM的IPTG,转入22℃,200r/min培养16h,诱导表达蛋白。6000r/min常温离心10min,弃掉上清,菌体使用1/20体积的PBS重悬,以超声3s,间歇3s超声破碎菌体,12000r/min,4℃离心10min,分离上清和沉淀,取未诱导、诱导后上清、沉淀进行SDS-PAGE鉴定。The pGEX4T-1-Omp16 plasmid stored in the laboratory was transformed into BL21(DE3), the single clone was picked and activated to the logarithmic growth phase (OD600nm to 0.6-0.8), cooled to room temperature, and IPTG with a final concentration of 1mM was added. , transferred to 22 ℃, 200r/min culture for 16h, induced expression of protein. Centrifuge at 6000 r/min at room temperature for 10 min, discard the supernatant, resuspend the cells with 1/20 volume of PBS, disrupt the cells by sonicating for 3 s, intermittently for 3 s, centrifuge at 12,000 r/min, 4 °C for 10 min, separate the supernatant and the precipitate, take Uninduced, supernatant and pellet after induction were identified by SDS-PAGE.
(2)Omp16蛋白的纯化(2) Purification of Omp16 protein
取超声后上清,使用0.45μM滤器过滤除杂质,放置于冰上备用。将取1mL GSTresin至层析柱中,带介质自然沉降,加入10倍体积PBS平衡柱子。加入过滤后的表达上清,调整流速为0.5mL/min,吸附目的蛋白。上样结束后,加入10-20倍体积的PBS洗脱杂蛋白,至流出液再280nm吸光度接近0。使用洗脱缓冲液(50mM Tris-Cl,10mM还原型谷胱甘肽)洗脱目的蛋白,控制流速为0.5mL/min,收集流出液。SDS-PAGE检测流出液的蛋白含量,并将蛋白透析至PBS溶液中,测定蛋白浓度,分装冻存至-80℃冰箱。The supernatant after sonication was taken, filtered with a 0.45 μM filter to remove impurities, and placed on ice for later use. 1 mL of GSTresin will be taken into the chromatography column, and the medium will settle naturally, and 10 times the volume of PBS will be added to equilibrate the column. The filtered expression supernatant was added, and the flow rate was adjusted to 0.5 mL/min to adsorb the target protein. After loading, add 10-20 times the volume of PBS to elute impurity proteins until the effluent absorbance at 280nm is close to 0. The target protein was eluted with elution buffer (50 mM Tris-Cl, 10 mM reduced glutathione), the flow rate was controlled at 0.5 mL/min, and the effluent was collected. The protein content of the effluent was detected by SDS-PAGE, the protein was dialyzed into PBS solution, the protein concentration was determined, and the aliquots were frozen and stored in a -80°C refrigerator.
(3)骆驼血清中Omp16抗体滴度测定(3) Determination of Omp16 antibody titer in camel serum
骆驼血清效价的ELISA检测:将制备的Omp16按照2μg/mL浓度包被至ELISA板中,4℃孵育过夜。以含有0.5%的吐温-20的PBS溶液(PBS’T)为洗液,洗板三次。加入含有2.5%脱脂奶粉的PBS’T溶液,37℃封闭ELISA板1h,洗板三次。使用封闭液稀释(未免疫的骆驼血清和三免后的骆驼血清(稀释倍数为103、104、105、106、107、108),以100μL/孔加入至ELISA板中,37℃孵育1h。洗板三次,以1∶2000稀释比例加入兔抗骆驼lgG多抗,37℃孵育1h。洗板三次后使用辣根过氧化物酶标记的山羊抗兔lgG,37℃孵育1h。洗板三次后加入TMB室温显色10min,3M硫酸终止反应,酶标仪读取波长为450nm的吸光度,分析骆驼免疫效果。ELISA detection of camel serum titer: The prepared Omp16 was coated on an ELISA plate at a concentration of 2 μg/mL, and incubated at 4°C overnight. The plate was washed three times with PBS containing 0.5% Tween-20 (PBS'T) as the wash solution. PBS'T solution containing 2.5% nonfat dry milk was added, the ELISA plate was blocked at 37°C for 1 h, and the plate was washed three times. Diluted with blocking solution (unimmunized camel serum and three-immunized camel serum (dilution multiples of 10 3 , 10 4 , 10 5 , 10 6 , 10 7 , 10 8 ), added to the ELISA plate at 100 μL/well, Incubate at 37 °C for 1 h. Wash the plate three times, add rabbit anti-camel IgG polyclonal antibody at a dilution ratio of 1:2000, and incubate at 37 °C for 1 h. After washing the plate three times, use horseradish peroxidase-labeled goat anti-rabbit IgG, and incubate at 37 °C for 1 h After washing the plate three times, add TMB for color development at room temperature for 10 min, 3M sulfuric acid to stop the reaction, read the absorbance at a wavelength of 450 nm with a microplate reader, and analyze the camel immune effect.
2.布鲁氏菌A19疫苗株噬菌体展示文库的构建2. Construction of phage display library of Brucella A19 vaccine strain
2.1 RNA的提取及cDNA制备2.1 RNA extraction and cDNA preparation
取A19免疫后骆驼外周血淋巴细胞2×107,使用TaKaRa公司MiniBESTUniversalRNA Extraction Kit提取外周血淋巴细胞总RNA,测定RNA浓度和纯度。使用Thermo Fisher公司RevertAid First Strand cDNA Synthesis Kit,oligo(dT)18引物获得cDNA,具体反转录体系如下:2 × 10 7 lymphocytes from the camel's peripheral blood after A19 immunization were taken, and the total RNA of the peripheral blood lymphocytes was extracted using the MiniBEST Universal RNA Extraction Kit of TaKaRa Company, and the RNA concentration and purity were determined. Use Thermo Fisher's RevertAid First Strand cDNA Synthesis Kit, oligo(dT) 18 primer to obtain cDNA, and the specific reverse transcription system is as follows:
PBMC总RNA 1μg,oligo(dT)181μL,DEPC H2O加至12μL,混匀后65℃孵育5_min,4℃保存。在上述体系中加入以下的反应组分,具体如下5×reaction buffer 4μL,RibolockRNase lnhibitor(20U/μL)1μL,10mM dNTP Mix 2μL,ReverAid M-MμLV RT(200U/μL)1μL。混匀后42℃反转录60min,70℃反应5min,终止反应。反转录产物短期保存于4℃,长期保存于-20或-80℃。PBMC
2.2巢式PGR扩增VHH基因2.2 Nested PGR amplification of VHH gene
巢式PCR扩增VHH基因的引物序列如下:The primer sequences for nested PCR amplification of VHH gene are as follows:
第一轮PCR扩增基因大小约700bp,The first round PCR amplification gene size is about 700bp,
上游引物CALL0015’-GTCCTGGCTGCTCTTCTACAAGG-3’;Upstream primer CALL0015'-GTCCTGGCTGCTCTTCTACAAGG-3';
下游引物CALL0025’-GGTACGTGCTGTTGAACTGTTCC-3’;Downstream primer CALL0025'-GGTACGTGCTGTTGAACTGTTCC-3';
第二轮PCR扩增基因大小约400bp,The second round PCR amplification gene size is about 400bp,
上游引物VHH-FOR 5’-CAGGTGCAGCTGCAGGAGTCTGGGGGAGR-3’;Upstream primer VHH-FOR 5'-CAGGTGCAGCTGCAGGAGTCTGGGGGAGR-3';
下游引物VHH-REV 5’-CTAGTGCGGCCGCTGAGGAGACGGTGACCTGGGT-3’。Downstream primer VHH-REV 5'-CTAGTGCGGCCGCTGAGGAGACGGTGACCTGGGT-3'.
使用北京全式金DNA Polymerase High Fidelity进行PCR扩增,反应体系如下:cDNA(或第一轮PCR回收产物)2μL,上游引物2μL,下游引物2μL,HiFi Buffer II 5μL,10mM dNTP Mix 4μL,HiFi DNAPolymerase 1μL,H2O 34μL。Use Beijing Full Gold DNA Polymerase High Fidelity was used for PCR amplification. The reaction system was as follows: 2μL of cDNA (or the first-round PCR recovery product), 2μL of upstream primer, 2μL of downstream primer, HiFi Buffer II 5μL, 10mM dNTP Mix 4μL,
PGR反应程序为:94℃预变性5min,变性94℃30sec,退火55℃30sec,延伸72℃40s,其中第一轮PGR扩增18个循环,第二轮PGR扩增28个循环,最后72℃总延伸10min。琼脂糖凝胶电泳鉴定扩增情况,并使用胶回收试剂胶回收400bp左右的条带,测定回收产物浓度。The PGR reaction program is: pre-denaturation at 94°C for 5 min, denaturation at 94°C for 30sec, annealing at 55°C for 30sec, extension at 72°C for 40s, including 18 cycles of the first round of PGR amplification, 28 cycles of the second round of PGR amplification, and the final 72°C The total extension is 10min. Agarose gel electrophoresis was used to identify the amplification, and the gel recovery reagent was used to recover the band of about 400bp, and the concentration of the recovered product was determined.
2.3VHH噬菌体展示文库的构建2.3 Construction of VHH phage display library
(1)pMECs-VHH重组载体的构建(1) Construction of pMECs-VHH recombinant vector
将pMECs空载体和回收的VHH基因使用限制性内切酶Pst I和Not I进行双酶切,具体反应体系如下:10×Buffer 5μL;Quick cut Pst I 1μL;Quick cut Not I 1μL;pMECs(或VHH)1ug;H20 up to 50μL。37℃孵育1h。回收酶切后片段,测定浓度。连接回收载体和目的片段,体系如下:10×T4 DNA ligase buffer 50μL,pMECs酶切产物6.9ug,VHH 2.3ug,T4DNA ligase 5ug,H20 up to 500μL。16℃连接8h。回收连接产物,并测定回收浓度。The pMECs empty vector and the recovered VHH gene were double digested with restriction enzymes Pst I and Not I, and the specific reaction system was as follows: 10×
(2)TG1感受态细胞的制备(2) Preparation of TG1 competent cells
挑取TG1单菌落至10mL 2×YT培养基中,37℃,200r/min震荡培养至对数生长期。以1∶100比例转接至800mL 2×YT培养基中,37℃,200r/min震荡培养约2h至对数生长期,置于冰上30min,待菌液冷却。按照2200×g,4℃,离心10min的条件,使用预冷的无菌超纯水和10%甘油各洗涤细胞两次。最后一次离心,弃尽上清,加入1.6mL 10%的甘油重悬细胞,并按照每管100μL量分装保存至-80℃。Pick a single colony of TG1 into 10 mL of 2×YT medium, 37 ° C, 200 r/min shaking culture to logarithmic growth phase. Transfer to
(3)重组质粒的电转化(3) Electrotransformation of recombinant plasmids
取100μL TG1感受态与5μL重组质粒混匀,冰上静置5min。将混合物加入至预冷0.1mL电转杯中。调整电转化仪电压至1.8KV,电击细胞。使用2mL预热的SOC培养基重悬细胞。将重悬后的细胞取100μL进行梯度稀释,涂布至至氨苄葡萄糖LB平板,37℃培养12-14h计算文库库容。其余细胞直接涂布至氨苄葡萄糖LB平板,37℃培养8-10h,使用50%甘油收集菌苔,冻存于-80℃备用。Take 100 μL of TG1 competent and 5 μL of recombinant plasmid, mix well, and let stand on ice for 5 min. The mixture was added to a pre-cooled 0.1 mL rotor beaker. Adjust the voltage of the electrotransformer to 1.8KV and shock the cells. Resuspend cells in 2 mL of pre-warmed SOC medium. Take 100 μL of the resuspended cells for gradient dilution, spread them onto an ampicillin LB plate, and culture at 37°C for 12-14 hours to calculate the library capacity. The rest of the cells were directly spread on the ampicillin LB plate, cultured at 37°C for 8-10 h, collected with 50% glycerol, and frozen at -80°C for later use.
(4)文库的阳性率及多样性鉴定(4) Positive rate and diversity identification of the library
挑取96个转化子单克隆至LB氨苄培养基,37℃,220r/min震荡培养6h,通过使用引物MP57(5’-TTATGCTTCCGGCTCGTATG-3’)和VHH-REV对转化子进行菌液PCR鉴定,计算转化子阳性率。反应体系如下:2×rTaq Mix 10μL,MP571μL,VHH-REV 1μL,菌液1μL,ddH207μL。反应程序为94℃5min,94℃30sec,55℃30sec,72℃40s,扩增30个循环,72℃10min,阳性条带约500bp。随机选取10个阳性克隆使用MP57引物测序,比对文库的多样性。Pick 96 single clones of transformants into LB ampicillin medium, 37 ° C, 220r/min shaking culture for 6h, by using primers MP57 (5'-TTATGCTTCCGGCTCGTATG-3') and VHH-REV to carry out bacterial liquid PCR identification of transformants, The transformant positive rate was calculated. The reaction system is as follows: 10 μL of 2×rTaq Mix, 71 μL of MP5, 1 μL of VHH-REV, 1 μL of bacterial solution, and 207 μL of ddH. The reaction program was 94°C for 5min, 94°C for 30sec, 55°C for 30sec, 72°C for 40s, 30 cycles of amplification, 72°C for 10min, the positive band was about 500bp. 10 positive clones were randomly selected and sequenced using MP57 primers to compare the diversity of the library.
3.Omp16特异性纳米抗体的淘选3. Panning of Omp16-specific Nanobodies
(1)噬菌体文库的救援(1) Rescue of phage library
取100μL噬菌体展示文库,接种于100mL 2×YT/AMP-GLU培养基(含有1μg/mL氨苄青霉素和2%葡萄糖)中,37℃,200r/min培养至对数生长期。加入20个MOI剂量的辅助噬菌体M13K07,37℃静置30min。2800g室温离心10min,弃上清,沉淀使用200mL 2×YT/AMP-KAN(含有1μg/mL氨苄青霉素和卡那霉素)培养基重悬,37℃,200r/min培养14-16h。3800g,4℃离心30min,收集上清,加入1/5体积的PEG/NaCl(200g PEG6000,146g NaCl加水溶解,定容至1L),混匀,冰上静置6-8h。3800g,4℃离心30min弃上清,加入1mL PBS溶液重悬沉淀,4℃摇床孵育过夜,使噬菌体颗粒充分溶解。12000g 4℃离心15min收集上清,并使用对数生长期的TG1测定救援噬菌体滴度。Take 100 μL of the phage display library, inoculate it in 100 mL of 2×YT/AMP-GLU medium (containing 1 μg/mL ampicillin and 2% glucose), and cultivate to logarithmic growth phase at 37° C. and 200 r/min. Add 20 MOI doses of helper phage M13K07 and let stand at 37°C for 30 min. Centrifuge at 2800 g for 10 min at room temperature, discard the supernatant, resuspend the pellet in 200 mL of 2×YT/AMP-KAN (containing 1 μg/mL ampicillin and kanamycin) medium, and culture at 37°C for 14-16 h at 200 r/min. Centrifuge at 3800g for 30min at 4°C, collect the supernatant, add 1/5 volume of PEG/NaCl (200g PEG6000, 146g NaCl dissolved in water, dilute to 1L), mix well, and let stand on ice for 6-8h. Centrifuge at 3800 g for 30 min at 4°C to discard the supernatant, add 1 mL of PBS solution to resuspend the pellet, and incubate overnight at 4°C on a shaker to fully dissolve the phage particles. The supernatant was collected by centrifugation at 12000g at 4°C for 15min, and the rescue phage titer was determined using TG1 in logarithmic growth phase.
(2)Omp16特异性噬菌体的淘选(2) Panning of Omp16-specific phage
将纯化的Omp16蛋白用PBS缓冲液稀释至200μg/mL,包被至96孔酶标板上,每孔100μL,共包被3个孔。同时设置PBS对照孔,4℃包被过夜。弃去包被液,PBS’T洗板三次后,加入200μL2.5%脱脂奶粉,37℃封闭2h。弃去封闭液,加入2.5%脱脂奶粉稀释的噬菌体5×1010PFU/孔,37℃孵育2h。弃去噬菌体上清,使用PBS’T洗板10次,PBS洗板5次,每孔加入100μl新鲜配制的0.1M三乙胺,室温静置10min,吸出洗脱液迅速用等体积1MTris-HCl(pH=7.4)中和洗脱物。取400μL淘选产物按照文库救援的方法救援淘选噬菌体,同时检测噬菌体滴度。将救援后的噬菌体按照同样的方法进行第二轮、第三轮淘选。第二轮、第三轮的淘选Omp16的包被浓度分别为100、50μg/mL。The purified Omp16 protein was diluted with PBS buffer to 200 μg/mL, and coated on a 96-well microtiter plate, with 100 μL per well, and 3 wells were coated in total. At the same time, PBS control wells were set and coated overnight at 4°C. The coating solution was discarded, and after washing the plate three times with PBS'T, 200 μL of 2.5% nonfat milk powder was added, and the plate was blocked at 37°C for 2 hours. Discard the blocking solution, add 5×10 10 PFU/well of phage diluted with 2.5% nonfat milk powder, and incubate at 37°C for 2h. Discard the phage supernatant, wash the
(3)纳米抗体粗提物的制备(3) Preparation of Nanobody Crude Extract
随机挑取96个最后一轮淘选噬菌体单克隆至100μL LB/AMP-GLU培养基中,37℃200r/min培养8h。每个克隆取10μL培养物转接至500μL TB培养基中,37℃培养至对数生长期,加入10μL 100mM IPTG,继续培养12-14h。12000r/min离心2min,收集菌体,-80℃、37℃反复冻融三次裂解菌体,加入500μL PBS 4℃孵育30min重悬菌体,离心后上清即为粗提物。96 phage monoclones from the final round of panning were randomly selected into 100 μL LB/AMP-GLU medium, and cultured at 37°C at 200 r/min for 8 h. 10 μL of each clone was transferred to 500 μL TB medium, cultured at 37°C to logarithmic growth phase, 10 μL of 100 mM IPTG was added, and the culture was continued for 12-14 h. Centrifuge at 12000 r/min for 2 min, collect the cells, freeze-thaw at -80°C and 37°C three times to lyse the cells, add 500 μL of PBS and incubate at 4°C for 30 min to resuspend the cells. After centrifugation, the supernatant is the crude extract.
(4)噬菌体粗提物的的ELISA检测(4) ELISA detection of crude phage extracts
将纯化的Omp16重组蛋白和对照蛋白GST分别以2μg/mL浓度包被至96孔酶标板中,4℃孵育过夜。使用PBS’T洗涤酶标板4次,加入封闭液,每孔200μl,室温封闭1h。洗板后加入100μL粗提物进行ELISA反应,使用小鼠抗HA标签的抗体及HRP标记的山羊抗小鼠的二抗检测目的抗体。使用TMB室温显色10min,3M H2SO4终止反应,读取450nm波长的吸光度,分析试验结果。挑取阳性克隆进行序列分析,结果获得一株Omp16特异性纳米抗体序列QVQLQESGGGMVQPGGSLRLTCVGDGAFFKLVDMSWVRQAPGKRLEWVASINSGGDRTYYADSVKGRFTISRDNAKNTLYLQLNSLKTEDTAMYHCALGMPRAAGWDQVGPGTQVTVSS(如图5所示)。The purified Omp16 recombinant protein and the control protein GST were respectively coated in a 96-well microtiter plate at a concentration of 2 μg/mL, and incubated at 4°C overnight. Wash the
(5)重组纳米抗体识别Omp16蛋白western blot鉴定(5) Recombinant Nanobody Recognition Omp16 Protein Western Blot Identification
将布鲁氏菌A19和S2分别培养36h,12000r/min离心2min,沉淀使用PBS重悬后,煮沸灭活,超声破碎,12000r/min,4℃离心10min,去上清进行SDS-PAGE及转膜。加入纳米抗体粗提物为一抗,使用小鼠抗HA标签抗体及HRP-山羊抗小鼠lgG为二抗,孵育后ECL发光液显色,验证ELlSA阳性纳米抗体粗提物结合布鲁氏菌中Omp16的情况。Brucella A19 and S2 were cultured for 36 h respectively, centrifuged at 12000 r/min for 2 min, the precipitate was resuspended in PBS, boiled for inactivation, sonicated, centrifuged at 12000 r/min at 4°C for 10 min, and the supernatant was removed for SDS-PAGE and transfer. membrane. The crude nanobody extract was added as the primary antibody, and mouse anti-HA tag antibody and HRP-goat anti-mouse IgG were used as the secondary antibody. After incubation, the ECL luminescent liquid developed color to verify that the ELlSA-positive nanobody crude extract was bound to Brucella In the case of Omp16.
4.辣根过氧化物酶连接的纳米抗体的表达4. Expression of Horseradish Peroxidase-Conjugated Nanobodies
将NbA4的基因序列通过Pst I和Not I两个酶切位点插入至pCMV-HRP表达载体中,构建重组质粒,PGR和测序验证重组质粒的正确性。提取无内毒素的pCMV-NbA4-HRP重组质粒。使用Lipo8000(碧云天),12孔板每孔配制如下反应体系:Lipo80001.6μL,pCMV-NbA4-HRP 1μg,Opti-mem 50μL,将质粒转染至融合度为60-70%的HEK-293T细胞中,48h后收取上清检测NbA4-HRP的表达及活性。The gene sequence of NbA4 was inserted into the pCMV-HRP expression vector through the two restriction sites of Pst I and Not I, and the recombinant plasmid was constructed, and the correctness of the recombinant plasmid was verified by PGR and sequencing. The endotoxin-free pCMV-NbA4-HRP recombinant plasmid was extracted. Using Lipo8000 (Biyuntian), the following reaction system was prepared in each well of a 12-well plate: Lipo80001.6 μL, pCMV-NbA4-
5.基于NbA4-HRP阻断ELISA方法的建立5. Establishment of ELISA method based on NbA4-HRP blocking
5.1棋盘法确定抗原抗体工作浓度5.1 Determination of working concentration of antigen and antibody by checkerboard method
(1)抗原包被:设置Omp16浓度为1、2、4μg/mL,以100μL/孔包被至96孔酶标板上,4℃孵育过夜。(1) Antigen coating: set the concentration of Omp16 to 1, 2, and 4 μg/mL, coat with 100 μL/well on a 96-well ELISA plate, and incubate at 4°C overnight.
(2)封闭:PBS’T溶液洗板三次,每孔加入200μL 2.5%的脱脂奶粉,37℃封闭1h。(2) Blocking: Wash the plate three times with PBS'T solution, add 200 μL of 2.5% nonfat milk powder to each well, and block at 37°C for 1 h.
(3)孵育一抗:将收集的NbA4-HRP表达上清使用封闭液进行2、4、6、8、16、32、64倍梯度稀释,加入至酶标板中,37℃孵育1h。(3) Incubation with primary antibody: The collected NbA4-HRP expression supernatant was diluted 2, 4, 6, 8, 16, 32, and 64-fold with blocking solution, added to the ELISA plate, and incubated at 37°C for 1 h.
(4)显色和终止。加入100μLTMB溶液室温显色10min,50μL 3M H2SO4终止反应后,读取450nm吸光值,分析试验结果,确定阻断ELISA的抗原抗体使用浓度。(4) Color development and termination. Add 100 μL of TMB solution for color development at room temperature for 10 min, 50 μL of 3M H 2 SO 4 to terminate the reaction, read the absorbance at 450 nm, analyze the test results, and determine the concentration of antigen and antibody that blocks ELISA.
5.2基于HRP-NbA4阻断ELISA检测牛血清布鲁氏菌抗体5.2 Detection of Brucella antibodies in bovine serum based on HRP-NbA4 blocking ELISA
将Omp16稀释至2μg/mL,包被至96孔酶标板中,4℃过夜。加入2.5%的脱脂奶粉,37℃封闭1h。按照血清1∶20,HPR-NbA41∶4的比例将血清和纳米抗体混合,每孔100μL加入至酶标板中,37℃孵育1h,洗板后加入TMB和3M H2SO4显色,检测450nm处吸光度。Omp16 was diluted to 2 μg/mL, coated on a 96-well microtiter plate, overnight at 4°C. 2.5% skimmed milk powder was added, and the cells were blocked at 37°C for 1 h. Serum and nanobodies were mixed in the ratio of serum 1:20 and HPR-NbA41:4, 100 μL per well was added to the microtiter plate, incubated at 37°C for 1 h, after washing the plate, TMB and 3M H2SO4 were added for color development, and the absorbance at 450 nm was detected. .
以上对本发明的具体实施例进行了描述。需要理解的是,本发明并不局限于上述特定实施方式,本领域技术人员可以在权利要求的范围内做出各种变形或修改,这并不影响本发明的实质内容。Specific embodiments of the present invention have been described above. It should be understood that the present invention is not limited to the above-mentioned specific embodiments, and those skilled in the art can make various variations or modifications within the scope of the claims, which do not affect the essential content of the present invention.
序列表sequence listing
<110> 西北农林科技大学<110> Northwest A&F University
<120> 一种检测布鲁氏菌的Omp16特异性纳米抗体、表达载体及其应用<120> A kind of Omp16 specific nanobody for detecting Brucella, expression vector and application thereof
<160> 6<160> 6
<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0
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<212> DNA<212> DNA
<213> (人工序列)<213> (artificial sequence)
<400> 1<400> 1
gtcctggctg ctcttctaca agg 23gtcctggctg ctcttctaca agg 23
<210> 2<210> 2
<211> 23<211> 23
<212> DNA<212> DNA
<213> (人工序列)<213> (artificial sequence)
<400> 2<400> 2
ggtacgtgct gttgaactgt tcc 23ggtacgtgct gttgaactgt tcc 23
<210> 3<210> 3
<211> 29<211> 29
<212> DNA<212> DNA
<213> (人工序列)<213> (artificial sequence)
<400> 3<400> 3
caggtgcagc tgcaggagtc tgggggagr 29caggtgcagc tgcaggagtc tgggggagr 29
<210> 4<210> 4
<211> 34<211> 34
<212> DNA<212> DNA
<213> (人工序列)<213> (artificial sequence)
<400> 4<400> 4
ctagtgcggc cgctgaggag acggtgacct gggt 34ctagtgcggc cgctgaggag acggtgacct gggt 34
<210> 5<210> 5
<211> 20<211> 20
<212> DNA<212> DNA
<213> (人工序列)<213> (artificial sequence)
<400> 5<400> 5
ttatgcttcc ggctcgtatg 20
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<212> PRT<212> PRT
<213> (人工序列)<213> (artificial sequence)
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Gln Val Gln Leu Gln Glu Ser Gly Gly Gly Met Val Gln Pro Gly GlyGln Val Gln Leu Gln Glu Ser Gly Gly Gly Met Val Gln Pro Gly Gly
1 5 10 151 5 10 15
Ser Leu Arg Leu Thr Cys Val Gly Asp Gly Ala Phe Phe Lys Leu ValSer Leu Arg Leu Thr Cys Val Gly Asp Gly Ala Phe Phe Lys Leu Val
20 25 30 20 25 30
Asp Met Ser Trp Val Arg Gln Ala Pro Gly Lys Arg Leu Glu Trp ValAsp Met Ser Trp Val Arg Gln Ala Pro Gly Lys Arg Leu Glu Trp Val
35 40 45 35 40 45
Ala Ser Ile Asn Ser Gly Gly Asp Arg Thr Tyr Tyr Ala Asp Ser ValAla Ser Ile Asn Ser Gly Gly Asp Arg Thr Tyr Tyr Ala Asp Ser Val
50 55 60 50 55 60
Lys Gly Arg Phe Thr Ile Ser Arg Asp Asn Ala Lys Asn Thr Leu TyrLys Gly Arg Phe Thr Ile Ser Arg Asp Asn Ala Lys Asn Thr Leu Tyr
65 70 75 8065 70 75 80
Leu Gln Leu Asn Ser Leu Lys Thr Glu Asp Thr Ala Met Tyr His CysLeu Gln Leu Asn Ser Leu Lys Thr Glu Asp Thr Ala Met Tyr His Cys
85 90 95 85 90 95
Ala Leu Gly Met Pro Arg Ala Ala Gly Trp Asp Gln Val Gly Pro GlyAla Leu Gly Met Pro Arg Ala Ala Gly Trp Asp Gln Val Gly Pro Gly
100 105 110 100 105 110
Thr Gln Val Thr Val Ser SerThr Gln Val Thr Val Ser Ser
115 115
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CN118477174A (en) * | 2024-06-04 | 2024-08-13 | 西北农林科技大学 | Application of Brucella OMP16 monoclonal antibody in the preparation of products for inhibiting Brucella |
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CN116789815A (en) * | 2023-06-27 | 2023-09-22 | 西北农林科技大学 | A specific nanobody for detecting Brucella Bp26 and its application |
CN118477174A (en) * | 2024-06-04 | 2024-08-13 | 西北农林科技大学 | Application of Brucella OMP16 monoclonal antibody in the preparation of products for inhibiting Brucella |
CN118477174B (en) * | 2024-06-04 | 2025-01-21 | 西北农林科技大学 | Application of Brucella OMP16 monoclonal antibody in the preparation of products for inhibiting Brucella |
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