CN114763367A - Compounds, conjugates and uses thereof - Google Patents
Compounds, conjugates and uses thereof Download PDFInfo
- Publication number
- CN114763367A CN114763367A CN202111499092.9A CN202111499092A CN114763367A CN 114763367 A CN114763367 A CN 114763367A CN 202111499092 A CN202111499092 A CN 202111499092A CN 114763367 A CN114763367 A CN 114763367A
- Authority
- CN
- China
- Prior art keywords
- formula
- group
- alkyl
- compound
- conjugate
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
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- 150000001875 compounds Chemical class 0.000 title claims abstract description 60
- 239000003814 drug Substances 0.000 claims abstract description 57
- 229940079593 drug Drugs 0.000 claims abstract description 47
- 150000007523 nucleic acids Chemical class 0.000 claims abstract description 37
- 108020004707 nucleic acids Proteins 0.000 claims abstract description 32
- 102000039446 nucleic acids Human genes 0.000 claims abstract description 32
- 238000002360 preparation method Methods 0.000 claims abstract description 24
- -1 4-methoxytrityl Chemical group 0.000 claims description 64
- 125000002887 hydroxy group Chemical group [H]O* 0.000 claims description 56
- 125000000008 (C1-C10) alkyl group Chemical group 0.000 claims description 43
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 claims description 42
- 125000002221 trityl group Chemical group [H]C1=C([H])C([H])=C([H])C([H])=C1C([*])(C1=C(C(=C(C(=C1[H])[H])[H])[H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 claims description 29
- 239000007790 solid phase Substances 0.000 claims description 28
- 125000001731 2-cyanoethyl group Chemical group [H]C([H])(*)C([H])([H])C#N 0.000 claims description 22
- 125000001188 haloalkyl group Chemical group 0.000 claims description 20
- 125000001981 tert-butyldimethylsilyl group Chemical group [H]C([H])([H])[Si]([H])(C([H])([H])[H])[*]C(C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H] 0.000 claims description 20
- 125000002103 4,4'-dimethoxytriphenylmethyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C(*)(C1=C([H])C([H])=C(OC([H])([H])[H])C([H])=C1[H])C1=C([H])C([H])=C(OC([H])([H])[H])C([H])=C1[H] 0.000 claims description 17
- 125000004432 carbon atom Chemical group C* 0.000 claims description 17
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 15
- 125000005041 acyloxyalkyl group Chemical group 0.000 claims description 14
- 229910052717 sulfur Chemical group 0.000 claims description 14
- 229910019142 PO4 Inorganic materials 0.000 claims description 13
- 239000010452 phosphate Substances 0.000 claims description 11
- 125000005037 alkyl phenyl group Chemical group 0.000 claims description 9
- 108090000623 proteins and genes Proteins 0.000 claims description 9
- MBLBDJOUHNCFQT-UHFFFAOYSA-N N-acetyl-D-galactosamine Natural products CC(=O)NC(C=O)C(O)C(O)C(O)CO MBLBDJOUHNCFQT-UHFFFAOYSA-N 0.000 claims description 8
- 125000000217 alkyl group Chemical group 0.000 claims description 8
- 125000003277 amino group Chemical group 0.000 claims description 8
- 125000004430 oxygen atom Chemical group O* 0.000 claims description 8
- 150000008300 phosphoramidites Chemical class 0.000 claims description 8
- 125000004434 sulfur atom Chemical group 0.000 claims description 8
- 229910052760 oxygen Inorganic materials 0.000 claims description 7
- 125000000027 (C1-C10) alkoxy group Chemical group 0.000 claims description 6
- UHOVQNZJYSORNB-UHFFFAOYSA-N Benzene Chemical compound C1=CC=CC=C1 UHOVQNZJYSORNB-UHFFFAOYSA-N 0.000 claims description 6
- OVRNDRQMDRJTHS-CBQIKETKSA-N N-Acetyl-D-Galactosamine Chemical group CC(=O)N[C@H]1[C@@H](O)O[C@H](CO)[C@H](O)[C@@H]1O OVRNDRQMDRJTHS-CBQIKETKSA-N 0.000 claims description 6
- 108091023037 Aptamer Proteins 0.000 claims description 5
- 125000003368 amide group Chemical group 0.000 claims description 5
- RTZKZFJDLAIYFH-UHFFFAOYSA-N ether Substances CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 claims description 5
- 229910052698 phosphorus Inorganic materials 0.000 claims description 5
- 239000011574 phosphorus Substances 0.000 claims description 5
- 229920001184 polypeptide Polymers 0.000 claims description 5
- 108090000765 processed proteins & peptides Proteins 0.000 claims description 5
- 102000004196 processed proteins & peptides Human genes 0.000 claims description 5
- 125000001313 C5-C10 heteroaryl group Chemical group 0.000 claims description 4
- 125000000041 C6-C10 aryl group Chemical group 0.000 claims description 4
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 claims description 4
- 125000001424 substituent group Chemical group 0.000 claims description 4
- GETQZCLCWQTVFV-UHFFFAOYSA-N trimethylamine Chemical compound CN(C)C GETQZCLCWQTVFV-UHFFFAOYSA-N 0.000 claims description 4
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 claims description 3
- 229910052799 carbon Inorganic materials 0.000 claims description 3
- 150000007942 carboxylates Chemical class 0.000 claims description 3
- 125000004093 cyano group Chemical group *C#N 0.000 claims description 3
- 150000002016 disaccharides Chemical class 0.000 claims description 3
- 150000004676 glycans Chemical class 0.000 claims description 3
- 150000002772 monosaccharides Chemical class 0.000 claims description 3
- 125000000449 nitro group Chemical group [O-][N+](*)=O 0.000 claims description 3
- 229920001282 polysaccharide Polymers 0.000 claims description 3
- 239000005017 polysaccharide Substances 0.000 claims description 3
- 150000005691 triesters Chemical class 0.000 claims description 3
- 150000004043 trisaccharides Chemical class 0.000 claims description 3
- 125000004182 2-chlorophenyl group Chemical group [H]C1=C([H])C(Cl)=C(*)C([H])=C1[H] 0.000 claims description 2
- 101001098868 Homo sapiens Proprotein convertase subtilisin/kexin type 9 Proteins 0.000 claims description 2
- 102100038955 Proprotein convertase subtilisin/kexin type 9 Human genes 0.000 claims description 2
- 150000001720 carbohydrates Chemical class 0.000 claims description 2
- 235000014633 carbohydrates Nutrition 0.000 claims description 2
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 claims description 2
- 125000002560 nitrile group Chemical group 0.000 claims description 2
- RKBCYCFRFCNLTO-UHFFFAOYSA-N triisopropylamine Chemical compound CC(C)N(C(C)C)C(C)C RKBCYCFRFCNLTO-UHFFFAOYSA-N 0.000 claims description 2
- YFTHZRPMJXBUME-UHFFFAOYSA-N tripropylamine Chemical compound CCCN(CCC)CCC YFTHZRPMJXBUME-UHFFFAOYSA-N 0.000 claims description 2
- NBIIXXVUZAFLBC-UHFFFAOYSA-N Phosphoric acid Chemical compound OP(O)(O)=O NBIIXXVUZAFLBC-UHFFFAOYSA-N 0.000 claims 4
- 229910000147 aluminium phosphate Inorganic materials 0.000 claims 2
- 125000004185 ester group Chemical group 0.000 claims 2
- 125000005843 halogen group Chemical group 0.000 claims 1
- 150000003018 phosphorus compounds Chemical class 0.000 claims 1
- 239000000178 monomer Substances 0.000 abstract description 19
- 230000008901 benefit Effects 0.000 abstract description 3
- 238000012377 drug delivery Methods 0.000 abstract description 3
- 230000035515 penetration Effects 0.000 abstract 1
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 129
- 239000000243 solution Substances 0.000 description 80
- 238000006243 chemical reaction Methods 0.000 description 70
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 56
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 48
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 36
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine (DIPEA) Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 36
- 230000002829 reductive effect Effects 0.000 description 30
- 239000002904 solvent Substances 0.000 description 26
- 125000003729 nucleotide group Chemical group 0.000 description 25
- 108020004459 Small interfering RNA Proteins 0.000 description 24
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- 230000000692 anti-sense effect Effects 0.000 description 22
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- 230000015572 biosynthetic process Effects 0.000 description 16
- 238000003786 synthesis reaction Methods 0.000 description 16
- 108091034117 Oligonucleotide Proteins 0.000 description 15
- 238000002390 rotary evaporation Methods 0.000 description 15
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 14
- PMZURENOXWZQFD-UHFFFAOYSA-L Sodium Sulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=O PMZURENOXWZQFD-UHFFFAOYSA-L 0.000 description 14
- 108091081021 Sense strand Proteins 0.000 description 13
- 239000012043 crude product Substances 0.000 description 13
- 230000014509 gene expression Effects 0.000 description 13
- 239000012046 mixed solvent Substances 0.000 description 13
- JUJWROOIHBZHMG-UHFFFAOYSA-N pyridine Substances C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 13
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 12
- 238000000034 method Methods 0.000 description 12
- 239000002777 nucleoside Substances 0.000 description 12
- 150000003833 nucleoside derivatives Chemical class 0.000 description 12
- 238000005859 coupling reaction Methods 0.000 description 11
- 239000000047 product Substances 0.000 description 11
- 238000000746 purification Methods 0.000 description 11
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 11
- 108091032973 (ribonucleotides)n+m Proteins 0.000 description 10
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 10
- VLKZOEOYAKHREP-UHFFFAOYSA-N n-Hexane Chemical compound CCCCCC VLKZOEOYAKHREP-UHFFFAOYSA-N 0.000 description 10
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-Dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 9
- 238000010828 elution Methods 0.000 description 9
- 239000011521 glass Substances 0.000 description 9
- 239000007787 solid Substances 0.000 description 9
- WWTBZEKOSBFBEM-SPWPXUSOSA-N (2s)-2-[[2-benzyl-3-[hydroxy-[(1r)-2-phenyl-1-(phenylmethoxycarbonylamino)ethyl]phosphoryl]propanoyl]amino]-3-(1h-indol-3-yl)propanoic acid Chemical compound N([C@@H](CC=1C2=CC=CC=C2NC=1)C(=O)O)C(=O)C(CP(O)(=O)[C@H](CC=1C=CC=CC=1)NC(=O)OCC=1C=CC=CC=1)CC1=CC=CC=C1 WWTBZEKOSBFBEM-SPWPXUSOSA-N 0.000 description 8
- WFDIJRYMOXRFFG-UHFFFAOYSA-N Acetic anhydride Chemical compound CC(=O)OC(C)=O WFDIJRYMOXRFFG-UHFFFAOYSA-N 0.000 description 8
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 8
- 229940126208 compound 22 Drugs 0.000 description 8
- 230000008878 coupling Effects 0.000 description 8
- 238000010168 coupling process Methods 0.000 description 8
- 239000012071 phase Substances 0.000 description 8
- SZUVGFMDDVSKSI-WIFOCOSTSA-N (1s,2s,3s,5r)-1-(carboxymethyl)-3,5-bis[(4-phenoxyphenyl)methyl-propylcarbamoyl]cyclopentane-1,2-dicarboxylic acid Chemical compound O=C([C@@H]1[C@@H]([C@](CC(O)=O)([C@H](C(=O)N(CCC)CC=2C=CC(OC=3C=CC=CC=3)=CC=2)C1)C(O)=O)C(O)=O)N(CCC)CC(C=C1)=CC=C1OC1=CC=CC=C1 SZUVGFMDDVSKSI-WIFOCOSTSA-N 0.000 description 7
- YPFDHNVEDLHUCE-UHFFFAOYSA-N 1,3-propanediol Substances OCCCO YPFDHNVEDLHUCE-UHFFFAOYSA-N 0.000 description 7
- 229940126543 compound 14 Drugs 0.000 description 7
- 229920000166 polytrimethylene carbonate Polymers 0.000 description 7
- 125000006239 protecting group Chemical group 0.000 description 7
- 102000005962 receptors Human genes 0.000 description 7
- 108020003175 receptors Proteins 0.000 description 7
- 239000004576 sand Substances 0.000 description 7
- HPALAKNZSZLMCH-UHFFFAOYSA-M sodium;chloride;hydrate Chemical class O.[Na+].[Cl-] HPALAKNZSZLMCH-UHFFFAOYSA-M 0.000 description 7
- 238000010532 solid phase synthesis reaction Methods 0.000 description 7
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 6
- PYMYPHUHKUWMLA-LMVFSUKVSA-N Ribose Natural products OC[C@@H](O)[C@@H](O)[C@@H](O)C=O PYMYPHUHKUWMLA-LMVFSUKVSA-N 0.000 description 6
- 101150091380 TTR gene Proteins 0.000 description 6
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 6
- PYMYPHUHKUWMLA-UHFFFAOYSA-N arabinose Natural products OCC(O)C(O)C(O)C=O PYMYPHUHKUWMLA-UHFFFAOYSA-N 0.000 description 6
- 230000000295 complement effect Effects 0.000 description 6
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- 238000010511 deprotection reaction Methods 0.000 description 6
- 229910052739 hydrogen Inorganic materials 0.000 description 6
- 239000001257 hydrogen Substances 0.000 description 6
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- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 6
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- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 description 5
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- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H15/00—Compounds containing hydrocarbon or substituted hydrocarbon radicals directly attached to hetero atoms of saccharide radicals
- C07H15/02—Acyclic radicals, not substituted by cyclic structures
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- A61K47/50—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates
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Abstract
Description
技术领域technical field
本发明涉及小核酸药物递送技术领域,具体涉及化合物、缀合物及其用途。The present invention relates to the technical field of small nucleic acid drug delivery, in particular to compounds, conjugates and uses thereof.
背景技术Background technique
递送系统是小核酸药物开发中的核心关键技术之一,目前全球范围内对小核酸递送系统研究最广泛的一类递送系统是靶向缀合递送技术。尽管以特定寡核苷酸和寡核苷酸类似物为代表的组织特异性活性剂在作为治疗剂的应用方面已取得部分进展,但是仍然存在对其药理特性的改进的需求,例如使其靶向性地递送至病灶以提高治疗剂的选择性,提高其生物活性及功效。最近靶向缀合递送技术成为一类研究最广泛的递送系统,特别是集中于肝靶向递送。The delivery system is one of the core key technologies in the development of small nucleic acid drugs. At present, the most widely studied type of delivery system for small nucleic acid delivery systems in the world is the targeted conjugation delivery technology. Although tissue-specific active agents represented by specific oligonucleotides and oligonucleotide analogs have partially progressed in their application as therapeutic agents, there is still a need for improvements in their pharmacological properties, such as targeting The tropism is delivered to the lesion to improve the selectivity of the therapeutic agent, improve its biological activity and efficacy. Recently targeted conjugation delivery technology has emerged as the most widely studied class of delivery systems, especially focusing on liver-targeted delivery.
发明内容SUMMARY OF THE INVENTION
本发明的目的是为了解决现有技术存在的问题,本发明提供了一种化合物、缀合物及其制备方法和用途。The purpose of the present invention is to solve the problems existing in the prior art, and the present invention provides a compound, a conjugate and a preparation method and use thereof.
为了实现上述目的,本发明第一方面提供一种化合物M,该化合物M具有式(V)或(V’)所示的结构:In order to achieve the above object, the first aspect of the present invention provides a compound M, the compound M has the structure shown in formula (V) or (V'):
式(V)或(V’)中,In formula (V) or (V'),
A为适配体,具有来自糖或多肽的结构;A is an aptamer, which has a structure derived from a carbohydrate or a polypeptide;
L1为长度为1-50个碳原子的具有醚键和/或酰胺键的直链基团;L1 is a straight-chain group having an ether bond and/or an amide bond with a length of 1-50 carbon atoms;
Z具有来自第一磷化合物的结构,所述第一磷化合物选自亚磷酰胺、H-磷酸酯和磷酸三酯中的一种,并且能够通过磷酸酯键或磷酰胺二酯键以共价键的方式与相邻的基团连接。Z has a structure derived from a first phosphorus compound selected from one of phosphoramidites, H-phosphates, and phosphoric triesters, and capable of covalently covalently passing through a phosphate bond or a phosphoramide diester bond Bonds are attached to adjacent groups.
本发明第二方面提供了一种缀合物N,该缀合物N具有式(VI)所示的结构:The second aspect of the present invention provides a conjugate N, the conjugate N has the structure shown in formula (VI):
(M)m-R” (VI)(M)m-R” (VI)
式(VI)中,m为1-4的整数,M具有来自权利要求1中式(V)或(V’)所示结构的化合物提供,且当m大于1时,多个M相同或不同;In formula (VI), m is an integer of 1-4, M is provided by a compound having the structure shown in formula (V) or (V') in claim 1, and when m is greater than 1, multiple Ms are the same or different;
R”具有能够与Nu相连接的活性位点。R" has an active site capable of linking with Nu.
本发明第三方面还提供了一种缀合物T,该缀合物T具有式(VIII)所示的结构:The third aspect of the present invention also provides a conjugate T, the conjugate T has the structure shown in formula (VIII):
式(VIII)中,M1、M2和M3至少一个具有来自化合物M的结构,其中,所述化合物M的结构与前述第一方面定义相同;M1、M2和M3相同或不同。In formula (VIII), at least one of M1, M2 and M3 has a structure derived from compound M, wherein the structure of compound M is the same as defined in the aforementioned first aspect; M1, M2 and M3 are the same or different.
本发明第四方面提供了一种前述化合物M、缀合物N和T在制备小核酸药物中的用途。The fourth aspect of the present invention provides the use of the aforementioned compound M, conjugates N and T in the preparation of small nucleic acid drugs.
本发明提供了一种核酸类药物靶向递送单体和缀合物及其制备方法,该单体以及由该单体所形成的特定设计结构的缀合物能够特异性地靶向递送活性药物(或小核酸)到细胞受体(或表面),并与受体结合。连接了活性药物(或小核酸)的缀合物利用其结构特性能提高核酸类药物的细胞穿透的能力,并增强其在细胞内的稳定性,能够有效解决药物定向递送问题。本发明的递送单体和缀合物具有制备工艺简单、适用于各类靶向药物的递送,并且用途十分广泛等优势。The present invention provides a nucleic acid drug targeted delivery monomer and conjugate and a preparation method thereof. The monomer and the conjugate with a specific designed structure formed by the monomer can specifically target and deliver active drugs (or small nucleic acids) to cellular receptors (or surfaces) and bind to the receptors. Conjugates linked to active drugs (or small nucleic acids) can improve the cell penetration ability of nucleic acid drugs by utilizing their structural properties, and enhance their intracellular stability, which can effectively solve the problem of targeted drug delivery. The delivery monomer and conjugate of the present invention have the advantages of simple preparation process, suitable for delivery of various targeted drugs, and wide range of uses.
附图说明Description of drawings
图1是本发明一种具体实施方式的siRNA缀合物的制备流程示意图;Fig. 1 is a schematic diagram of the preparation process of the siRNA conjugate of a specific embodiment of the present invention;
图2为siRNA(SNK-17)在C57BL/6小鼠中降低肝脏TTR mRNA表达的结果;Figure 2 shows the results of siRNA (SNK-17) reducing liver TTR mRNA expression in C57BL/6 mice;
图3为siRNA(SNK-18)在C57BL/6小鼠中降低肝脏TTR mRNA表达的结果。Figure 3 shows the results of siRNA (SNK-18) reducing liver TTR mRNA expression in C57BL/6 mice.
具体实施方式Detailed ways
在本文中所披露的范围的端点和任何值都不限于该精确的范围或值,这些范围或值应当理解为包含接近这些范围或值的值。对于数值范围来说,各个范围的端点值之间、各个范围的端点值和单独的点值之间,以及单独的点值之间可以彼此组合而得到一个或多个新的数值范围,这些数值范围应被视为在本文中具体公开。The endpoints of ranges and any values disclosed herein are not limited to the precise ranges or values, which are to be understood to encompass values proximate to those ranges or values. For ranges of values, the endpoints of each range, the endpoints of each range and the individual point values, and the individual point values can be combined with each other to yield one or more new ranges of values that Ranges should be considered as specifically disclosed herein.
本发明中,C1-C10的基团是指碳原子数为1、2、3、4、5、6、7、8、9或10,C6-C10或C5-C10亦然。In the present invention, a C1-C10 group refers to a group having 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 carbon atoms, and the same applies to C6-C10 or C5-C10.
本发明中,1-10的整数包括1、2、3、4、5、6、7、8、9或10,1-4的整数或1-6的整数亦然。In the present invention, the integer of 1-10 includes 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10, and the integer of 1-4 or the integer of 1-6 is also the same.
本发明中,Ac为乙酰基。In the present invention, Ac is an acetyl group.
本发明中,Nu为活性药物,优选为功能性寡聚核糖核酸和/或寡聚脱氧核糖核酸。本发明中,所述活性药物Nu优选为siRNA,如实施例所述的siRNA,且本发明的缀合物可以通过磷酸二酯键与所述siRNA的正义链的5’端或3’端相连,也可以通过磷酸二酯键与siRNA的反义链的5’端或3’端相连。In the present invention, Nu is an active drug, preferably functional oligoribonucleic acid and/or oligodeoxyribonucleic acid. In the present invention, the active drug Nu is preferably siRNA, such as the siRNA described in the examples, and the conjugate of the present invention can be connected to the 5' end or 3' end of the sense strand of the siRNA through a phosphodiester bond , can also be linked to the 5' or 3' end of the antisense strand of siRNA through a phosphodiester bond.
本发明第一方面提供一种化合物L2,L2具有式(I)、(II)、(III)或(IV)所示的结构:A first aspect of the present invention provides a compound L2, L2 has the structure shown in formula (I), (II), (III) or (IV):
其中,式(I)、(II)、(III)或(IV)中Ra各自独立地为H或羟基保护基;所述羟基保护基可以选自DMT(4,4’-二甲氧基三苯甲基)、MMT(4-甲氧基三苯甲基)、三苯甲基、TBDMS(叔丁基二甲基甲硅烷基)、4-氧戊烷酰基、2-氰基乙基、PNT(4-戊烯酰基)和酰氧基烷基中的一种;Wherein, in formula (I), (II), (III) or (IV), Ra is independently H or a hydroxyl protecting group; the hydroxyl protecting group can be selected from DMT(4,4'-dimethoxytri benzyl), MMT (4-methoxytrityl), trityl, TBDMS (tert-butyldimethylsilyl), 4-oxopentanoyl, 2-cyanoethyl, One of PNT (4-pentenoyl) and acyloxyalkyl;
式(I)中的R1和R2、式(II)中R4均具有共价键的连接位点;R 1 and R 2 in formula (I) and R 4 in formula (II) all have a covalent bonding site;
式(III)或(IV)中,n为1-10的整数;In formula (III) or (IV), n is an integer of 1-10;
式(II)、(III)或(IV)中,表示通过活性位点连接活性基团后得到的结构;其中,所述活性位点为可以通过共价键连接的位点;所述活性基团选自亚磷酰胺基、H-磷酸酯基、磷酸酯基和多羟基烷基中的一种。In formula (II), (III) or (IV), Represents a structure obtained by connecting an active group through an active site; wherein, the active site is a site that can be connected by covalent bonds; the active group is selected from phosphoramidite, H-phosphate, One of phosphate ester group and polyhydroxyalkyl group.
式(I)中R1、R2以及式(II)中R4各自独立地为取代或未取代的长度为1-70个碳原子的直链基团,其中一个或多个碳原子任选地被选自于以下基团所组成的组中的一个或多个所替换:C(O)、NH、O和S;并且其中,R1可任选地具有以下基团所组成的组中的任何一个或多个的取代基:C1-C10的烷基、C6-C10的芳基、C5-C10的杂芳基、C1-C10的卤代烷基、-O-C1-C10的烷基、-O-C1-C10的烷基苯基、-C1-C10的烷基-OH、-O-C1-C10的卤代烷基、-S-C1-C10的烷基、-SC1-C10的烷基苯基、-C1-C10的烷基-SH、-S-C1-C10的卤代烷基、卤素取代基、-OH、-SH、-NH2、-C1-C10的烷基-NH2、-N-(C1-C10的烷基)(C1-C10的烷基)、-NH-(C1-C10的烷基)、氰基、硝基、-CO2H、-C(O)-O-(C1-C10的烷基)、-CON-(C1-C10的烷基)(C1-C10的烷基)、-CONH(C1-C10的烷基)、-CONH2,-NHC(O)(C1-C10的烷基)、-NHC(O)(苯基)、-N(C1-C10的烷基)C(O)(C1-C10烷基)、-N(C1-C10烷基)C(O)(苯基)、-C(O)C1-C10烷基、-C(O)C1-C10烷基苯基、-C(O)C1-C10的卤烷基、-OC(O)C1-C10的烷基、-SO2(C1-C10的烷基)、-SO2(苯基)、-SO2(C1-C10的卤代烷基)、-SO2NH2、-SO2NH(C1-C10的烷基)、-SO2NH(苯基)、-NHSO2(C1-C10的烷基)、-NHSO2(苯基)和-NHSO2(C1-C10的卤代烷基);R 1 , R 2 in formula (I) and R 4 in formula (II) are each independently a substituted or unsubstituted straight-chain group with a length of 1-70 carbon atoms, wherein one or more carbon atoms are optional is replaced by one or more selected from the group consisting of C(O), NH, O, and S; and wherein R 1 may optionally have in the group consisting of Any one or more of the substituents: C1-C10 alkyl, C6-C10 aryl, C5-C10 heteroaryl, C1-C10 haloalkyl, -O-C1-C10 alkyl, - O-C1-C10 alkylphenyl, -C1-C10 alkyl-OH, -O-C1-C10 haloalkyl, -S-C1-C10 alkyl, -SC1-C10 alkylphenyl , -C1-C10 alkyl-SH, -S-C1-C10 halogenated alkyl, halogen substituent, -OH, -SH, -NH 2 , -C1-C10 alkyl-NH 2 , -N-( C1-C10 alkyl) (C1-C10 alkyl), -NH- (C1-C10 alkyl), cyano, nitro, -CO 2 H, -C(O)-O-(C1- C10 alkyl), -CON- (C1-C10 alkyl) (C1-C10 alkyl), -CONH (C1-C10 alkyl), -CONH 2 , -NHC(O) (C1-C10 alkyl), -NHC(O)(phenyl), -N(C1-C10 alkyl)C(O)(C1-C10 alkyl), -N(C1-C10 alkyl)C(O) (Phenyl), -C(O)C1-C10 alkyl, -C(O)C1-C10 alkylphenyl, -C(O)C1-C10 haloalkyl, -OC(O)C1-C10 Alkyl, -SO 2 (C1-C10 alkyl), -SO 2 (phenyl), -SO 2 (C1-C10 haloalkyl), -SO 2 NH 2 , -SO 2 NH (C1-C10 -SO 2 NH (phenyl), -NHSO 2 (C1-C10 alkyl), -NHSO 2 (phenyl) and -NHSO 2 (C1-C10 halogenated alkyl);
式(I)中,R2还可以为H;In formula (I), R 2 can also be H;
式(II)中,R3是取代或未取代的C1-C20的烷基;并且其中,R3可任选地具有以下基团所组成的组中的任何一个或多个的取代基:C1-C10的烷基、C6-C10的芳基、C5-C10的杂芳基、C1-C10的卤代烷基、-OC1-C10的烷基。In formula (II), R 3 is a substituted or unsubstituted C1-C20 alkyl group; and wherein, R 3 may optionally have any one or more substituents from the group consisting of: C1 -C10 alkyl group, C6-C10 aryl group, C5-C10 heteroaryl group, C1-C10 halogenated alkyl group, -OC1-C10 alkyl group.
根据本发明的一些实施方式,R1各自独立地选自以下基团中的一种或多种的基团以任意数量任意方式连接后得到的基团;According to some embodiments of the present invention, each R 1 is independently selected from one or more of the following groups, which are connected in any number and in any manner;
-(CH2)n-、-O-和-CONH-;其中,n为1-10的整数。-(CH 2 )n-, -O- and -CONH-; wherein n is an integer of 1-10.
根据本发明的一些实施方式,R2和R4各自独立地选自以下基团中的一种或多种的基团以任意数量任意方式连接后得到的基团;According to some embodiments of the present invention, R 2 and R 4 are each independently selected from one or more of the following groups, which are connected in any number and in any manner;
-(CH2)n-、-O-、-CONH-和-(OCH2CH2)n-;其中,n为1-10的整数。-(CH 2 )n-, -O-, -CONH- and -(OCH 2 CH 2 )n-; wherein n is an integer of 1-10.
根据本发明的一些实施方式,R3为C1-C6的烷基。According to some embodiments of the present invention, R 3 is a C1-C6 alkyl group.
根据本发明的一些实施方式,所述化合物L2具有选自式(A1)-(A24)所示结构中的一种:According to some embodiments of the present invention, the compound L2 has one selected from the structures represented by formulae (A1)-(A24):
其中,式(A2)-(A24)中m或n各自独立地为1-10的整数;可以表示通过活性位点连接活性基团后得到的结构;其中,所述活性位点为可以通过共价键连接的位点;所述活性基团可以选自亚磷酰胺基、H-磷酸酯基、磷酸酯基和多羟基烷基中的一种。Wherein, m or n in formula (A2)-(A24) are each independently an integer of 1-10; It can represent the structure obtained by connecting active groups through active sites; wherein, the active sites are sites that can be connected by covalent bonds; the active groups can be selected from phosphoramidite, H-phosphate ester one of a phosphate group, a phosphate group and a polyhydroxyalkyl group.
根据本发明的一些实施方式,式(A2)-(A24)中,-OH表示羟基或被羟基保护基保护的羟基。其中,所述羟基保护基可以选自DMT(4,4’-二甲氧基三苯甲基)、MMT(4-甲氧基三苯甲基)、三苯甲基、TBDMS(叔丁基二甲基甲硅烷基)、(4-氧戊烷酰基)、2-氰基乙基和PNT(4-戊烯酰基)和酰氧基烷基中的一种。According to some embodiments of the present invention, in formulas (A2)-(A24), -OH represents a hydroxyl group or a hydroxyl group protected by a hydroxyl protecting group. Wherein, the hydroxyl protecting group can be selected from DMT (4,4'-dimethoxytrityl), MMT (4-methoxytrityl), trityl, TBDMS (tert-butyl group) One of dimethylsilyl), (4-oxopentanoyl), 2-cyanoethyl and PNT (4-pentenoyl) and acyloxyalkyl.
本发明第二方面提供一种化合物M,所述化合物M具有式(V)或(V’)所示的结构:A second aspect of the present invention provides a compound M, the compound M has a structure represented by formula (V) or (V'):
式(V)或(V’)中,In formula (V) or (V'),
A为适配体,为能促进所递送物质与相应的配体(如去唾液酸糖蛋白受体)进行高亲和力和强特异性的结合的结构,具有来自糖或多肽的结构;A is an aptamer, which is a structure that can promote the high-affinity and strong-specific binding of the delivered substance to the corresponding ligand (such as asialoglycoprotein receptor), and has a structure derived from sugar or polypeptide;
L1为长度为1-50个碳原子的具有醚键和/或酰胺键的直链基团;L1 is a straight-chain group having an ether bond and/or an amide bond with a length of 1-50 carbon atoms;
L2的结构如前所述(L2与A、L1和Z的连接位置可以在氧、硫、氮、碳原子上);The structure of L2 is as described above (the attachment position of L2 to A, L1 and Z can be on oxygen, sulfur, nitrogen, carbon atoms);
Z为具有来自第一磷化合物的结构,主要起连接和偶合作用,所述第一磷化合物可以选自亚磷酰胺、H-磷酸酯和磷酸三酯中的一种,并且可以通过磷酸酯键或磷酰胺二酯键以共价键的方式与相邻的基团连接。Z is a structure derived from a first phosphorus compound, which mainly acts as a linking and coupling function, and the first phosphorus compound may be selected from one of phosphoramidite, H-phosphate and phosphoric triester, and may pass through a phosphate bond Or phosphoramide diester bonds are covalently linked to adjacent groups.
根据本发明的一些实施方式,L1可以选自以下基团中的一种或多种的基团以任意数量任意方式连接后得到的基团:According to some embodiments of the present invention, L1 can be selected from the group obtained by connecting one or more of the following groups in any number and in any manner:
-CH2-、-O-、-OCH2-和-CONH-。 -CH2- , -O-, -OCH2- and -CONH-.
根据本发明的一些实施方式,L1可以选自以下基团中的一种:According to some embodiments of the present invention, L1 may be selected from one of the following groups:
-O-[CH2CH2O]-n、-[CH2]m-CONH-[CH2]nO-和-O-[CH2CH2O]m-CONH-[CH2]nO-;其中,m和n各自独立地为1-10的整数。-O-[ CH2CH2O ] -n , -[ CH2 ] m -CONH-[ CH2 ] nO- and -O-[ CH2CH2O ] m - CONH- [ CH2 ] nO -; wherein m and n are each independently an integer of 1-10.
根据本发明的一些实施方式,所述糖可以选自单糖、二糖、三糖或多糖中的一种;优选地,所述糖可以为修饰的糖。According to some embodiments of the present invention, the sugar may be selected from one of monosaccharides, disaccharides, trisaccharides or polysaccharides; preferably, the sugar may be a modified sugar.
根据本发明的一些实施方式,A可以选自D-吡喃甘露糖、L-吡喃甘露糖、D-阿拉伯糖、D-呋喃木糖、L-呋喃木糖、D-葡萄糖、L-葡萄糖、D-半乳糖、L-半乳糖、α-D-呋喃甘露糖、β-D-呋喃甘露糖、α-D-吡喃甘露糖、β-D-吡喃甘露糖、α-D-吡喃葡萄糖、β-D-吡喃葡萄糖、α-D-呋喃葡萄糖、β-D-呋喃葡萄糖、α-D-呋喃果糖、α-D-吡喃果糖、α-D-吡喃半乳糖、β-D-吡喃半乳糖、α-D-呋喃半乳糖、β-D-呋喃半乳糖、葡糖胺、唾液酸、半乳糖胺、N-乙酰基半乳糖胺、N-三氟乙酰基半乳糖胺、N-丙酰基半乳糖胺、N-正丁酰基半乳糖胺、N-异丁酰基半乳糖胺、2-氨基-3-O-[(R)-1-羧乙基]-2-脱氧-β-D-吡喃葡萄糖、2-脱氧-2-甲基氨基-L-吡喃葡萄糖、4,6-二脱氧-4-甲酰胺基-2,3-二-O-甲基-D-吡喃甘露糖、2-脱氧-2-磺氨基-D-吡喃葡萄糖、N-乙醇酰基-α-神经氨酸、5-硫代-β-D-吡喃葡萄糖、2,3,4-三-O-乙酰基-1-硫代-6-O-三苯甲基-α-D-吡喃葡萄糖苷甲酯、4-硫代-β-D-吡喃半乳糖、3,4,6,7-四-O-乙酰基-2-脱氧-1,5-二硫代-α-D-吡喃葡庚糖苷乙酯、2,5-脱水-D-阿洛糖腈、核糖、D-核糖、D-4-硫代核糖、L-核糖或L-4-硫代核糖中的一种;优选地,所述糖为N-乙酰基半乳糖胺(GalNAc)。According to some embodiments of the present invention, A may be selected from D-mannose, L-mannose, D-arabinose, D-xylfuranose, L-xylfuranose, D-glucose, L-glucose , D-galactose, L-galactose, α-D-mannose, β-D-mannose, α-D-mannose, β-D-mannose, α-D-pyridine Glucuronose, β-D-glucopyranose, α-D-glucofuranose, β-D-glucofuranose, α-D-fructose, α-D-fructose, α-D-galactopyranose, β -D-galactopyranosine, α-D-galactofuranos, β-D-galactofuranos, glucosamine, sialic acid, galactosamine, N-acetylgalactosamine, N-trifluoroacetylgalactosamine Lactosamine, N-propionylgalactosamine, N-n-butyrylgalactosamine, N-isobutyrylgalactosamine, 2-amino-3-O-[(R)-1-carboxyethyl]-2 -Deoxy-β-D-glucopyranose, 2-deoxy-2-methylamino-L-glucopyranose, 4,6-dideoxy-4-carboxamido-2,3-di-O-methyl -D-mannanose, 2-deoxy-2-sulfoamino-D-glucopyranose, N-glycolyl-α-neuraminic acid, 5-thio-β-D-glucopyranose, 2,3 ,4-Tri-O-acetyl-1-thio-6-O-trityl-α-D-glucopyranoside methyl ester, 4-thio-β-D-galactopyranoside, 3 ,4,6,7-Tetra-O-acetyl-2-deoxy-1,5-dithio-α-D-glucopyranoside ethyl ester, 2,5-Anhydro-D-allosenitrile one of , ribose, D-ribose, D-4-ribose thio, L-ribose or L-4-ribose thio; preferably, the sugar is N-acetylgalactosamine (GalNAc).
根据本发明的一些实施方式,A还可以选自蛋白质、单克隆抗体和纳米体中的一种。According to some embodiments of the present invention, A can also be selected from one of proteins, monoclonal antibodies and nanobodies.
本发明中,A可以选自能够和细胞表面受体结合的配体;并且,A具有活性羟基或氨基,A可以通过与羟基或氨基以共价键的方式与L1相连;A的作用为利用其与受体的亲和性,将活性药物Nu递送到靶点位置;其中,当A为糖时,连接位点通常包括1位羟基。In the present invention, A can be selected from ligands that can bind to cell surface receptors; and, A has an active hydroxyl or amino group, and A can be connected to L1 by covalent bonding with the hydroxyl or amino group; the role of A is to utilize Its affinity with the receptor delivers the active drug Nu to the target site; wherein, when A is a sugar, the linking site usually includes the 1-position hydroxyl group.
本发明中,所述受体可以为肝细胞表面受体,也可以为人体肝细胞上的去唾液酸糖蛋白受体。In the present invention, the receptor can be a receptor on the surface of hepatocytes, or can be an asialoglycoprotein receptor on human hepatocytes.
本发明中,所述活性药物Nu可以为寡聚核糖核酸和/或寡聚脱氧核糖核酸。In the present invention, the active drug Nu can be oligoribonucleic acid and/or oligodeoxyribonucleic acid.
根据本发明的一些实施方式,Z具有式(B1)、(B2)、(B3)、(B4)、(B5)或(B6)所示的结构:According to some embodiments of the present invention, Z has a structure represented by formula (B1), (B2), (B3), (B4), (B5) or (B6):
其中,式(B3)中的M选自TEA(三乙胺)、三甲胺、三异丙胺和三丙胺中的一种。其中,式(B4)-(B6)中的R’可选自2,2,2-三氯乙基、苯基、邻氯苯基、氰乙基、和Nu中的一种。(B1)、(B2)、(B3)、(B4)、(B5)或(B6)中表示可以通过共价键连接的位点。Wherein, M in formula (B3) is selected from the one in TEA (triethylamine), trimethylamine, triisopropylamine and tripropylamine. Wherein, R' in formula (B4)-(B6) can be selected from one of 2,2,2-trichloroethyl, phenyl, o-chlorophenyl, cyanoethyl, and Nu. (B1), (B2), (B3), (B4), (B5) or (B6) Indicates sites that can be linked by covalent bonds.
根据本发明的一些实施方式,所述化合物M具有式(101)、(102)、(201)、(202)、(203)、(301)或(302)所示的结构:According to some embodiments of the present invention, the compound M has a structure represented by formula (101), (102), (201), (202), (203), (301) or (302):
根据本发明的一些实施方式,所述化合物M可以与活性药物Nu连接;所述活性药物Nu可以通过磷酸酯键(例如磷酸二酯键或硫代磷酸二酯键)或磷酰胺二酯键与所述化合物M连接。所述活性药物Nu如前所述。According to some embodiments of the present invention, the compound M can be linked with the active drug Nu; the active drug Nu can be linked to the active drug Nu through a phosphate bond (eg, a phosphodiester bond or a phosphorothioate bond) or a phosphoramide diester bond. The compound M is linked. The active drug Nu is as previously described.
本发明第三方面提供第一缀合物N,所述第一缀合物N具有式(VI)所示的结构:The third aspect of the present invention provides a first conjugate N, the first conjugate N has a structure represented by formula (VI):
(M)m-R” (VI)(M)m-R” (VI)
式(VI)中,m可以为1-4的整数,当m大于1时,M可以独立地为式(V)或(V’)所示的结构且多个M可以相同或不同;R”具有能够与活性药物Nu相连接的活性位点;或者,R”可以为通过活性位点连接了活性药物Nu的基团。In formula (VI), m can be an integer of 1-4, when m is greater than 1, M can independently be the structure shown in formula (V) or (V') and multiple M can be the same or different; R" Has an active site capable of being linked to the active drug Nu; alternatively, R" can be a group to which the active drug Nu is linked through the active site.
根据本发明的一些实施方式,所述第一缀合物N具有式(a)、(b)、(c)、(d)或(e)所示的结构:According to some embodiments of the present invention, the first conjugate N has a structure represented by formula (a), (b), (c), (d) or (e):
其中,式(a)、(b)、(c)、(d)或(e)中,Wherein, in formula (a), (b), (c), (d) or (e),
n、n1或n2各自独立地为1-10的整数,优选为1-6的整数;m各自独立地为1-10的整数,优选为1-4的整数;X为氧原子或硫原子;n, n 1 or n 2 are each independently an integer of 1-10, preferably an integer of 1-6; m is each independently an integer of 1-10, preferably an integer of 1-4; X is an oxygen atom or sulfur atom;
L1’是长度为1-50个碳原子的具有醚键和/或酰胺键的直链基团;L1' is a straight-chain group having an ether bond and/or an amide bond with a length of 1-50 carbon atoms;
A’为适配体,具有来自糖或多肽的结构,A为能促进所递送物质与相应的配体(如去唾液酸糖蛋白受体)进行高亲和力和强特异性的结合的结构;A' is an aptamer, which has a structure derived from a sugar or a polypeptide, and A is a structure that can promote the binding of the delivered substance with the corresponding ligand (such as asialoglycoprotein receptor) with high affinity and strong specificity;
式(a)中,R5各自独立地选自H、C1-C10烷基、C1-C10卤代烷基或C1-C10烷氧基;In formula (a), R 5 is each independently selected from H, C1-C10 alkyl, C1-C10 haloalkyl or C1-C10 alkoxy;
式(c)中,R6选自H、C1-C10烷基、C1-C10卤代烷基或C1-C10烷氧基;R7为H或羟基保护基,所述羟基保护基选自DMT(4,4’-二甲氧基三苯甲基)、MMT(4-甲氧基三苯甲基)、三苯甲基、TBDMS(叔丁基二甲基甲硅烷基)、4-氧戊烷酰基、2-氰基乙基、PNT(4-戊烯酰基)和酰氧基烷基中的一种,优选地,R7为2-氰基乙基;In formula (c), R 6 is selected from H, C1-C10 alkyl, C1-C10 haloalkyl or C1-C10 alkoxy; R 7 is H or a hydroxyl protecting group, and the hydroxyl protecting group is selected from DMT (4 ,4'-dimethoxytrityl), MMT (4-methoxytrityl), trityl, TBDMS (tert-butyldimethylsilyl), 4-oxopentane One of acyl group, 2-cyanoethyl group, PNT (4-pentenoyl group) and acyloxyalkyl group, preferably, R 7 is 2-cyanoethyl group;
式(e)中,R8为H或羟基保护基;所述羟基保护基可以选自DMT(4,4’-二甲氧基三苯甲基)、MMT(4-甲氧基三苯甲基)、三苯甲基、TBDMS(叔丁基二甲基甲硅烷基)、4-氧戊烷酰基、2-氰基乙基、PNT(4-戊烯酰基)和酰氧基烷基中的一种,优选为2-氰基乙基;优选地,R8为2-氰基乙基;In formula (e), R 8 is H or a hydroxyl protecting group; the hydroxyl protecting group can be selected from DMT (4,4'-dimethoxytrityl), MMT (4-methoxytrityl) group), trityl, TBDMS (tert-butyldimethylsilyl), 4-oxopentanoyl, 2-cyanoethyl, PNT (4-pentenoyl) and acyloxyalkyl A kind of, preferably 2-cyanoethyl; Preferably, R 8 is 2-cyanoethyl;
其中,可以表示通过共价键与活性药物Nu或其他基团连接的位点,或者,可以表示通过共价键连接了活性药物Nu的基团。所述活性药物Nu如前所述。in, Can represent the site to which the active drug Nu or other group is attached via a covalent bond, or, Can represent a group to which the active drug Nu is attached by a covalent bond. The active drug Nu is as previously described.
根据本发明的一些实施方式,L1’可以选自以下基团中的一种或多种的基团以任意数量任意方式连接后得到的基团:According to some embodiments of the present invention, L1' can be selected from the group obtained by connecting one or more of the following groups in any number and in any manner:
-CH2-、-O-、-OCH2-和-CONH-。 -CH2- , -O-, -OCH2- and -CONH-.
根据本发明的一些实施方式,L1’可以选自以下基团中的一种:According to some embodiments of the present invention, L1' can be selected from one of the following groups:
-O-[CH2CH2O]n、-[CH2]m-CONH-[CH2]nO-、-O-[CH2CH2O]m-CONH-[CH2]nO-和-O-[CH2CH2O]m-CONH-[CH2]nO-;其中,m和n各自独立地为1-10的整数。-O-[CH 2 CH 2 O] n , -[CH 2 ] m -CONH-[CH 2 ] n O-, -O-[CH 2 CH 2 O] m -CONH-[CH 2 ] n O- and -O-[ CH2CH2O ] m -CONH-[ CH2 ]nO- ; wherein m and n are each independently an integer of 1-10.
根据本发明的一些实施方式,A’可以选自单糖、二糖、三糖或多糖中的一种,并且A’可以为修饰的糖。According to some embodiments of the present invention, A' may be selected from one of monosaccharides, disaccharides, trisaccharides or polysaccharides, and A' may be a modified sugar.
根据本发明的一些实施方式,A’可以选自D-吡喃甘露糖、L-吡喃甘露糖、D-阿拉伯糖、D-呋喃木糖、L-呋喃木糖、D-葡萄糖、L-葡萄糖、D-半乳糖、L-半乳糖、α-D-呋喃甘露糖、β-D-呋喃甘露糖、α-D-吡喃甘露糖、β-D-吡喃甘露糖、α-D-吡喃葡萄糖、β-D-吡喃葡萄糖、α-D-呋喃葡萄糖、β-D-呋喃葡萄糖、α-D-呋喃果糖、α-D-吡喃果糖、α-D-吡喃半乳糖、β-D-吡喃半乳糖、α-D-呋喃半乳糖、β-D-呋喃半乳糖、葡糖胺、唾液酸、半乳糖胺、N-乙酰基半乳糖胺、N-三氟乙酰基半乳糖胺、N-丙酰基半乳糖胺、N-正丁酰基半乳糖胺、N-异丁酰基半乳糖胺、2-氨基-3-O-[(R)-1-羧乙基]-2-脱氧-β-D-吡喃葡萄糖、2-脱氧-2-甲基氨基-L-吡喃葡萄糖、4,6-二脱氧-4-甲酰胺基-2,3-二-O-甲基-D-吡喃甘露糖、2-脱氧-2-磺氨基-D-吡喃葡萄糖、N-乙醇酰基-α-神经氨酸、5-硫代-β-D-吡喃葡萄糖、2,3,4-三-O-乙酰基-1-硫代-6-O-三苯甲基-α-D-吡喃葡萄糖苷甲酯、4-硫代-β-D-吡喃半乳糖、3,4,6,7-四-O-乙酰基-2-脱氧-1,5-二硫代-α-D-吡喃葡庚糖苷乙酯、2,5-脱水-D-阿洛糖腈、核糖、D-核糖、D-4-硫代核糖、L-核糖或L-4-硫代核糖中的一种;优选地,A’为N-乙酰基半乳糖胺(GalNAc)。According to some embodiments of the present invention, A' may be selected from D-mannose, L-mannose, D-arabinose, D-xylofuranose, L-xylofuranose, D-glucose, L- Glucose, D-Galactose, L-Galactose, α-D-Mannofuranosose, β-D-Mannofuranosose, α-D-Mannpyranose, β-D-Mannose, α-D- glucopyranose, β-D-glucopyranose, α-D-glucopyranose, β-D-glucofuranose, α-D-fructose, α-D-fructose, α-D-galactopyranose, β-D-galactopyranosine, α-D-galactofuranos, β-D-galactofuranos, glucosamine, sialic acid, galactosamine, N-acetylgalactosamine, N-trifluoroacetyl Galactosamine, N-propionylgalactosamine, N-n-butyrylgalactosamine, N-isobutyrylgalactosamine, 2-amino-3-O-[(R)-1-carboxyethyl]- 2-Deoxy-β-D-glucopyranose, 2-deoxy-2-methylamino-L-glucopyranose, 4,6-dideoxy-4-carboxamido-2,3-di-O-methyl yl-D-mannanose, 2-deoxy-2-sulfoamino-D-glucopyranose, N-glycolyl-α-neuraminic acid, 5-thio-β-D-glucopyranose, 2, 3,4-Tri-O-acetyl-1-thio-6-O-trityl-α-D-glucopyranoside methyl ester, 4-thio-β-D-galactopyranoside, 3,4,6,7-Tetra-O-acetyl-2-deoxy-1,5-dithio-α-D-glucopyranoside ethyl ester, 2,5-anhydro-D-allose One of nitrile, ribose, D-ribose, D-4-ribose thio, L-ribose or L-4-ribose thio; preferably, A' is N-acetylgalactosamine (GalNAc).
根据本发明的一些实施方式,A’还可以选自蛋白质、单克隆抗体和纳米体中的一种。According to some embodiments of the present invention, A' can also be selected from one of proteins, monoclonal antibodies and nanobodies.
本发明中,A’可以选自能够和细胞表面受体结合的配体;并且,A’具有活性羟基或氨基,可以通过与羟基或氨基形成共价键的方式与L1相连;A’的作用为利用其与受体的亲和性,将活性药物Nu递送到靶点位置;其中,当A’为糖时,连接位点通常包括1位羟基。In the present invention, A' can be selected from ligands that can bind to cell surface receptors; and, A' has an active hydroxyl or amino group, and can be connected to L1 by forming a covalent bond with the hydroxyl or amino group; the role of A' In order to take advantage of its affinity with the receptor, the active drug Nu is delivered to the target site; wherein, when A' is a sugar, the attachment site usually includes the 1-position hydroxyl group.
根据本发明的一些实施方式,A’可以选自蛋白质、单克隆抗体和纳米体中的一种。According to some embodiments of the present invention, A' may be selected from one of proteins, monoclonal antibodies and nanobodies.
本发明中,A’可以独立地选自能够和细胞表面受体结合的配体;并且,A’具有活性羟基或氨基,可以通过与羟基或氨基形成共价键的方式与L1相连;A’的作用包括利用其与受体的亲和性,将活性药物Nu递送到靶点位置;其中,当A’为糖时,连接位点通常包括1位羟基。In the present invention, A' can be independently selected from ligands that can bind to cell surface receptors; and, A' has an active hydroxyl group or an amino group, and can be connected to L 1 by forming a covalent bond with the hydroxyl group or amino group; A The role of ' includes using its affinity with the receptor to deliver the active drug Nu to the target site; wherein, when A' is a sugar, the linking site usually includes a 1-position hydroxyl group.
根据本发明的一些实施方式,所述第一缀合物N具有式(401)、(402)、(501)、(502)或(503)所示的结构:According to some embodiments of the present invention, the first conjugate N has a structure represented by formula (401), (402), (501), (502) or (503):
式(401)、(402)、(501)、(502)或(503)中,X为氧原子或硫原子;Rx具有连接固相载体的位点基团,可选择固相载体上的琥珀酰胺基或羟基;Nu是通过共价键连接的活性药物小核酸(例如活性功能性寡核苷酸);Rz为羟基保护基,可以选自2-氰基乙基。In formula (401), (402), (501), (502) or (503), X is an oxygen atom or a sulfur atom; Rx has a site group for connecting the solid support, and succinate on the solid support can be selected. amide group or hydroxyl group; Nu is a small nucleic acid of active drug (such as active functional oligonucleotide) linked by covalent bond; Rz is a hydroxyl protecting group, which can be selected from 2-cyanoethyl group.
根据本发明的一些实施方式,式(401)、(402)、(501)、(502)或(503)中,Nu可以被其他具有活性位点的基团代替。According to some embodiments of the present invention, in formula (401), (402), (501), (502) or (503), Nu may be replaced by other groups having an active site.
本发明第四方面提供一种化合物L3,所述化合物L3具有式(VII)所示的结构:The fourth aspect of the present invention provides a compound L3, the compound L3 has the structure shown in formula (VII):
其中,Y为取代或未取代的长度为1-10个碳原子的直链基团,其中一个或多个碳原子任选地被一个或多个-CONH-所替换;Wherein, Y is a substituted or unsubstituted linear group with a length of 1-10 carbon atoms, wherein one or more carbon atoms are optionally replaced by one or more -CONH-;
式(VII)中,Ra’各自独立地为H或羟基保护基;所述羟基保护基可以选自DMT(4,4’-二甲氧基三苯甲基)、MMT(4-甲氧基三苯甲基)、三苯甲基、TBDMS(叔丁基二甲基甲硅烷基)、4-氧戊烷酰基、2-氰基乙基、PNT(4-戊烯酰基)和酰氧基烷基中的一种;In formula (VII), Ra' is independently H or a hydroxyl protecting group; the hydroxyl protecting group can be selected from DMT (4,4'-dimethoxytrityl), MMT (4-methoxytrityl) trityl), trityl, TBDMS (tert-butyldimethylsilyl), 4-oxopentanoyl, 2-cyanoethyl, PNT (4-pentenoyl) and acyloxy one of the alkyl groups;
R9和R10各自独立地具有H或长度为1-70个碳原子的端基含有羟基和/或被羟基保护基保护的羟基的直链基团,其中一个或多个碳原子任选地被选自于以下基团所组成的组中的一个或多个所替换:C(O)、NH、O和S;并且其中,R9和R10各自独立地任选地具有以下基团所组成的组中的任何一个或多个的取代基:C1-C10的烷基、C6-C10的芳基、C5-C10的杂芳基、C1-C10的卤代烷基、-OC1-C10的烷基、-OC1-C10的烷基苯基、-C1-C10的烷基-OH、-OC1-C10的卤代烷基、-SC1-C10的烷基、-SC1-C10的烷基苯基、-C1-C10的烷基-SH、-SC1-C10的卤代烷基、卤素取代基、-OH、-SH、-NH2、-C1-C10的烷基-NH2、-N(C1-C10的烷基)(C1-C10的烷基)、-NH(C1-C10的烷基)、氰基、硝基、-CO2H、-C(O)O(C1-C10的烷基)、-CON(C1-C10的烷基)(C1-C10的烷基)、-CONH(C1-C10的烷基)、-CONH2,-NHC(O)(C1-C10的烷基)、-NHC(O)(苯基)、-N(C1-C10的烷基)C(O)(C1-C10烷基)、-N(C1-C10烷基)C(O)(苯基)、-C(O)C1-C10烷基、-C(O)C1-C10烷基苯基、-C(O)C1-C10的卤烷基、-OC(O)C1-C10的烷基、-SO2(C1-C10的烷基)、-SO2(苯基)、-SO2(C1-C10的卤代烷基)、-SO2NH2、-SO2NH(C1-C10的烷基)、-SO2NH(苯基)、-NHSO2(C1-C10的烷基)、-NHSO2(苯基)和-NHSO2(C1-C10的卤代烷基)。其中,R9和R10还可以表示具有连接活性药物Nu的位点的基团。R9和R10还可以表示连接了活性药物Nu的基团。所述活性药物Nu如前所述。R 9 and R 10 each independently have H or a straight chain group of 1-70 carbon atoms in length containing a hydroxy group and/or a hydroxy group protected at the end by a hydroxy protecting group, wherein one or more carbon atoms are optionally is replaced by one or more selected from the group consisting of C(O), NH, O, and S; and wherein R 9 and R 10 each independently optionally have the following groups Substituents of any one or more of the group consisting of: C1-C10 alkyl, C6-C10 aryl, C5-C10 heteroaryl, C1-C10 haloalkyl, -OC1-C10 alkyl , -OC1-C10 alkylphenyl, -C1-C10 alkyl-OH, -OC1-C10 halogenated alkyl, -SC1-C10 alkyl, -SC1-C10 alkylphenyl, -C1- C10 alkyl-SH, -SC1-C10 haloalkyl, halogen substituent, -OH, -SH, -NH 2 , -C1-C10 alkyl-NH 2 , -N (C1-C10 alkyl) (C1-C10 alkyl), -NH (C1-C10 alkyl), cyano, nitro, -CO 2 H, -C(O)O (C1-C10 alkyl), -CON (C1 -C10 alkyl) (C1-C10 alkyl), -CONH (C1-C10 alkyl), -CONH 2 , -NHC(O) (C1-C10 alkyl), -NHC(O)( Phenyl), -N(C1-C10 alkyl)C(O)(C1-C10 alkyl), -N(C1-C10 alkyl)C(O)(phenyl), -C(O)C1 -C10 alkyl, -C(O)C1-C10 alkylphenyl, -C(O)C1-C10 haloalkyl, -OC(O)C1-C10 alkyl, -SO 2 (C1-C10 alkyl), -SO 2 (phenyl), -SO 2 (haloalkyl of C1-C10), -SO 2 NH 2 , -SO 2 NH (alkyl of C1-C10), -SO 2 NH (benzene base), -NHSO2 (C1-C10 alkyl), -NHSO2 (phenyl), and -NHSO2 (C1-C10 haloalkyl). Among them, R 9 and R 10 can also represent groups having a site for linking the active drug Nu. R 9 and R 10 can also represent groups to which the active drug Nu is attached. The active drug Nu is as previously described.
根据本发明的一些实施方式,Y可以为-CONH-或CH2。According to some embodiments of the present invention, Y may be -CONH- or CH2 .
根据本发明的一些实施方式,R9和R10各自独立地选自以下基团中的一种或多种的基团以任意数量任意方式连接后得到的基团:According to some embodiments of the present invention, R 9 and R 10 are each independently selected from one or more of the following groups, which are obtained by connecting in any number and in any manner:
-NH2-、-CH2-、-O-、-CONH-、-(OCH2CH2)n-、Z’、 -NH 2 -, -CH 2 -, -O-, -CONH-, -(OCH 2 CH 2 )n-, Z',
本发明中,可以由式(F1)、式(F2)、式(F3)、或式(F4)的基团衍生得到,In the present invention, can be derived from groups of formula (F1), formula (F2), formula (F3), or formula (F4),
式(F1)、式(F2)、式(F3)或式(F4)中,Rq为羟基保护基团,Rq可以选自三苯甲基、4-甲氧基三苯甲基、4,4’-二甲氧基三苯甲基和4,4’,4”-三甲氧基苯甲基中的一种。式(F3)中,M+可以为阳离子,也可以为金属阳离子,优选地,M+选自铵阳离子,叔胺阳离子和季胺阳离子。式(F4)中,X为O或NH,SPS表示固相载体。In formula (F1), formula (F2), formula (F3) or formula (F4), Rq is a hydroxyl protecting group, and Rq can be selected from trityl, 4-methoxytrityl, 4,4 One of '-dimethoxytrityl and 4,4',4"-trimethoxybenzyl. In formula (F3), M + can be a cation or a metal cation, preferably , M + is selected from ammonium cation, tertiary amine cation and quaternary ammonium cation. In formula (F4), X is O or NH, and SPS represents a solid phase carrier.
根据本发明的一些实施方式,R9和R10各自独立地具有式(D1)、(D2)或(D3)所示的结构:According to some embodiments of the present invention, R 9 and R 10 each independently have a structure represented by formula (D1), (D2) or (D3):
其中,m为0-6的整数(如0、1、2、3、4、5、6);M+为三乙胺阳离子;Wherein, m is an integer of 0-6 (such as 0, 1, 2, 3, 4, 5, 6); M + is triethylamine cation;
Rk’各自独立地选自H、羟基保护基或Nu;所述羟基保护基选自4,4’-二甲氧基三苯甲基、4-甲氧基三苯甲基、三苯甲基、叔丁基二甲基甲硅烷基、4-氧戊烷酰基、2-氰基乙基、4-戊烯酰基和酰氧基烷基中的一种;Nu为活性药物。Rk’还可以表示具有连接活性药物Nu的位点。Rk’还可以表示通过活性位点连接了活性药物Nu的基团。Rk ' is each independently selected from H, hydroxyl protecting group or Nu; the hydroxyl protecting group is selected from 4,4'-dimethoxytrityl, 4-methoxytrityl, trityl , one of tert-butyldimethylsilyl, 4-oxopentanoyl, 2-cyanoethyl, 4-pentenoyl and acyloxyalkyl; Nu is an active drug. R k' can also represent a site with a linking active drug Nu. R k' can also represent the group to which the active drug Nu is attached through the active site.
其中,n为1-10的整数;Z’为第二磷化合物,并且可以通过磷酸酯键或磷酰胺二酯键以共价键的方式与其他基团连接。Wherein, n is an integer of 1-10; Z' is the second phosphorus compound, and can be connected with other groups in a covalent manner through a phosphate bond or a phosphoramide diester bond.
根据本发明的一些实施方式,Z’具有式(C1)或(C2)所示的结构:According to some embodiments of the present invention, Z' has a structure represented by formula (C1) or (C2):
其中,Q和Q’各自独立地为O或S;R11和R12各自独立地选自H、C1-C10的烷基、C1-C10卤代烷基,C1-C10烷氧基;并且其中,R11和R12各自独立地含有如下所述的基团:腈基、氨基、羟基、羧基和酰胺基。wherein, Q and Q' are each independently O or S; R 11 and R 12 are each independently selected from H, C1-C10 alkyl, C1-C10 haloalkyl, C1-C10 alkoxy; and wherein R 11 and R 12 each independently contain groups as described below: a nitrile group, an amino group, a hydroxyl group, a carboxyl group and an amide group.
根据本发明的一些实施方式,所述化合物L3具有式(E1)-(E12)所示的结构:According to some embodiments of the present invention, the compound L3 has a structure represented by formulae (E1)-(E12):
其中,式(E1)-(E12)中,m和n为1-10的整数;Rb-Rk’各自独立地选自H、羟基保护基或Nu;所述羟基保护基选自DMT(4,4’-二甲氧基三苯甲基)、MMT(4-甲氧基三苯甲基)、三苯甲基、TBDMS(叔丁基二甲基甲硅烷基)、4-氧戊烷酰基、2-氰基乙基、PNT(4-戊烯酰基)和酰氧基烷基中的一种。Wherein, in formula (E1)-(E12), m and n are integers of 1-10; R b -R k' are each independently selected from H, hydroxyl protecting group or Nu; the hydroxyl protecting group is selected from DMT ( 4,4'-dimethoxytrityl), MMT (4-methoxytrityl), trityl, TBDMS (tert-butyldimethylsilyl), 4-oxopentane One of alkanoyl, 2-cyanoethyl, PNT (4-pentenoyl) and acyloxyalkyl.
本发明第五方面提供第二缀合物T,所述第二缀合物T具有式(VIII)所示的结构:The fifth aspect of the present invention provides a second conjugate T, the second conjugate T has a structure represented by formula (VIII):
式(VIII)中,M1、M2和M3至少一个具有来自前述化合物M的结构,其中,所述化合物M的结构如前所述;或者,M1、M2和M3各自独立地由如前所述的A、L1、L2或Z以任意数量任意方式连接后得到。其中,式(VIII)所示的化合物还可以表示连接了活性药物Nu;所述活性药物Nu如前所述。In formula (VIII), at least one of M1, M2 and M3 has a structure derived from the aforementioned compound M, wherein the structure of the compound M is as described above; A, L1, L2 or Z are obtained by connecting any number and any way. Wherein, the compound represented by formula (VIII) can also represent that the active drug Nu is connected; the active drug Nu is as described above.
根据本发明的一些实施方式,M1、M2和M3相同或不同。According to some embodiments of the invention, M1, M2 and M3 are the same or different.
根据本发明的一些实施方式,M1、M2和M3均具有来自前述化合物M的结构,相同或不同。According to some embodiments of the invention, M1, M2 and M3 all have the structure from compound M previously described, the same or different.
根据本发明的一些实施方式,所述第二缀合物T具有式(IX)或式(X)所示的结构:According to some embodiments of the present invention, the second conjugate T has the structure represented by formula (IX) or formula (X):
式(IX)中,A、L1、L2、L3或Z’的结构如前所述;其中,Z’可以为Z与L3连接之后形成的结构。式(X)中,A、L1的结构如前所述。其中,式(IX)、式(X)所示的化合物还可以表示连接了活性药物Nu。其中,Nu还可以表示保护基或固相载体。所述保护基如前所述。其中,对所述固相载体的种类不做特别的限制,可以为本领域的常规选择。In formula (IX), the structure of A, L1, L2, L3 or Z' is as described above; wherein, Z' can be the structure formed after Z and L3 are connected. In formula (X), the structures of A and L1 are as described above. Among them, the compounds represented by formula (IX) and formula (X) can also represent that the active drug Nu is connected. Among them, Nu can also represent a protective group or a solid phase carrier. The protecting groups are as previously described. Wherein, the type of the solid phase carrier is not particularly limited, and can be a conventional choice in the field.
根据本发明的一些实施方式,所述缀合物T具有式(IX-1)或式(X-1)所示的结构:According to some embodiments of the present invention, the conjugate T has a structure represented by formula (IX-1) or formula (X-1):
式(IX-1)或式(X-1)中,m和n各自独立地为0-6的整数;Rt和Rt’各自独立地选自H、羟基保护基、活性药物Nu、固相载体、C2-C6的羧基、羧酸盐或酰胺基;所述羟基保护基选自4,4’-二甲氧基三苯甲基、4-甲氧基三苯甲基、三苯甲基、叔丁基二甲基甲硅烷基、4-氧戊烷酰基、2-氰基乙基、4-戊烯酰基和酰氧基烷基中的一种。In formula (IX-1) or formula (X-1), m and n are each independently an integer of 0-6; Rt and Rt' are each independently selected from H, hydroxyl protecting group, active drug Nu, solid phase carrier , C2-C6 carboxyl group, carboxylate or amide group; the hydroxyl protecting group is selected from 4,4'-dimethoxytrityl, 4-methoxytrityl, trityl, One of tert-butyldimethylsilyl, 4-oxopentanoyl, 2-cyanoethyl, 4-pentenoyl and acyloxyalkyl.
根据本发明的一些实施方式,所述第二缀合物T具有式(601)、(602)、(603)、(604)、(605)、(606)或(607)所示的结构:According to some embodiments of the present invention, the second conjugate T has a structure represented by formula (601), (602), (603), (604), (605), (606) or (607):
其中,式(601)、(602)、(603)、(604)、(605)、(606)或(607)中,X为氧原子或硫原子;Nu为活性药物小核酸。Wherein, in formula (601), (602), (603), (604), (605), (606) or (607), X is an oxygen atom or a sulfur atom; Nu is an active drug small nucleic acid.
本发明中,式(603)所示结构的缀合物可以由式(603A)与酸酐(如丁二酸酐)接触得到相应的羧酸盐(603B),(603B)进一步连接至固相得到(603C),(603C)进而连接到活性基团Nu(如功能性小核酸)上,In the present invention, the conjugate of the structure represented by the formula (603) can be contacted by the formula (603A) with an acid anhydride (such as succinic anhydride) to obtain the corresponding carboxylate (603B), and (603B) is further connected to the solid phase to obtain ( 603C), (603C) is then connected to the active group Nu (such as functional small nucleic acid),
本发明中,式(606)所示结构的缀合物可以由式(101)所示的化合物经固相合成的方式制备得到。其中,对固相合成的方式不做特别的限制,可以为本领域的常规选择。In the present invention, the conjugate of the structure represented by the formula (606) can be prepared from the compound represented by the formula (101) by solid-phase synthesis. The method of solid-phase synthesis is not particularly limited, and can be a conventional choice in the field.
根据本发明的一些实施方式,式(601)、(602)、(603)、(604)、(605)、(606)或(607)中,Nu可以被其他具有活性位点的基团代替。According to some embodiments of the present invention, in formula (601), (602), (603), (604), (605), (606) or (607), Nu may be replaced by other groups having an active site .
本发明中,化合物M的制备可以按照以下方法制备(以式(101)的制备为例):In the present invention, the preparation of compound M can be prepared according to the following method (taking the preparation of formula (101) as an example):
(a)在氮气保护下,在第一溶剂中,将化合物3与N,N,N’N’-四异丙基氯亚磷酸酯和二异丙基乙胺接触进行反应;其中,接触的条件可以为室温;(a) under nitrogen protection, in the first solvent, compound 3 is contacted with N,N,N'N'-tetraisopropyl chlorophosphite and diisopropylethylamine to react; wherein, the contacted The condition can be room temperature;
(b)在第一溶剂的存在下,将1-O-二甲氧基三苯甲基-1,3-丙二醇和乙硫四唑加入上述反应后的溶液中,继续在室温氮气保护下进行反应。其中,化合物3、N,N,N’N’-四异丙基氯亚磷酸酯、二异丙基乙胺、1-O-二甲氧基三苯甲基-1,3-丙二醇和乙硫四唑的摩尔比可以为1:(1.2-2):(2.5-3.5):(1.2-2):(0.2-0.6)。其中,对所述第一溶剂的种类和用量不做特别的限制,只要能够满足本发明的需求即可。例如,所述第一溶剂可以为二氯甲烷。(b) in the presence of the first solvent, add 1-O-dimethoxytrityl-1,3-propanediol and ethylthiotetrazole into the solution after the above reaction, and continue to carry out under the protection of nitrogen at room temperature reaction. Among them, compound 3, N,N,N'N'-tetraisopropyl chlorophosphite, diisopropylethylamine, 1-O-dimethoxytrityl-1,3-propanediol and ethyl acetate The molar ratio of thiotetrazole may be 1:(1.2-2):(2.5-3.5):(1.2-2):(0.2-0.6). Wherein, the type and amount of the first solvent are not particularly limited, as long as the requirements of the present invention can be met. For example, the first solvent may be dichloromethane.
本发明对化合物M制备的后处理没有特别的限制,可以参照本领域常规的方式进行。例如所述后处理的步骤可以包括:将反应后的体系用饱和的食盐水洗涤,并用萃取溶剂(如二氯甲烷)进行萃取,合并有机相浓缩,之后经柱层析分离得到化合物(101)。The present invention has no particular limitation on the post-treatment for the preparation of compound M, which can be carried out with reference to the conventional manner in the art. For example, the post-treatment step may include: washing the reacted system with saturated brine, and extracting it with an extraction solvent (such as dichloromethane), combining the organic phases and concentrating, and then separating by column chromatography to obtain compound (101) .
本发明中,化合物3的制备为本领域技术人员熟知,本发明对化合物3的制备不做特别的限制,可以参照本领域常规的方式进行。In the present invention, the preparation of compound 3 is well known to those skilled in the art, and the preparation of compound 3 is not particularly limited in the present invention, and can be carried out with reference to conventional methods in the art.
本发明中,第二缀合物T的制备按照以下方法制备(以式(603A)的制备为例):In the present invention, the preparation of the second conjugate T is prepared according to the following method (taking the preparation of formula (603A) as an example):
(a)室温下,在第二溶剂的存在下,使化合物22与部分N,N-二异丙基乙胺混合得到混合物;其中,化合物22与N,N-二异丙基乙胺的摩尔比可以为1:(3-5);(a) At room temperature, in the presence of a second solvent, compound 22 is mixed with part of N,N-diisopropylethylamine to obtain a mixture; wherein, the moles of compound 22 and N,N-diisopropylethylamine The ratio can be 1:(3-5);
(b)在-5℃至5℃条件下,将上述混合物与2-(7-氮杂苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯和N,N-二异丙基乙胺以及化合物14混合并搅拌反应0.5-1小时;并继续在-5℃至5℃条件下,向反应溶液中补加部分N,N-二异丙基乙胺,继续反应1-2小时;其中,化合物22、化合物14、N,N-二异丙基乙胺以及2-(7-氮杂苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯的摩尔比可以为1:(1-1.2):(5-10):(1-1.2);优选地,部分N,N-二异丙基乙胺、和补加的N,N-二异丙基乙胺的摩尔比可以为1:(0.5-1);(b) at -5°C to 5°C, combine the above mixture with 2-(7-azabenzotriazole)-N,N,N',N'-tetramethylurea hexafluorophosphate and N,N-diisopropylethylamine and compound 14 were mixed and reacted with stirring for 0.5-1 hour; and continued to add part of N,N-diisopropylethylamine to the reaction solution at -5°C to 5°C Amine, continue to react for 1-2 hours; wherein, compound 22, compound 14, N,N-diisopropylethylamine and 2-(7-azabenzotriazole)-N,N,N',N The molar ratio of '-tetramethylurea hexafluorophosphate can be 1:(1-1.2):(5-10):(1-1.2); preferably, part of N,N-diisopropylethylamine, And the mol ratio of the added N,N-diisopropylethylamine can be 1:(0.5-1);
其中,对所述第二溶剂的种类和用量不做特别的限制,只要能够满足本发明的需求即可。例如,所述第二溶剂可以为二氯甲烷。Wherein, the type and amount of the second solvent are not particularly limited, as long as it can meet the requirements of the present invention. For example, the second solvent may be dichloromethane.
本发明对第二缀合物T制备的后处理没有特别的限制,可以参照本领域常规的方式进行。例如所述后处理的步骤可以包括:将反应后的体系的温度从0℃逐渐升至室温,然后继续搅拌2-5小时。将反应后的体系用饱和的食盐水洗涤,并用萃取溶剂(如二氯甲烷)进行萃取,合并有机相浓缩,之后经柱层析分离。The present invention has no particular limitation on the post-processing of the preparation of the second conjugate T, which can be carried out in a conventional manner in the art. For example, the post-treatment step may include: gradually increasing the temperature of the reacted system from 0° C. to room temperature, and then continuing to stir for 2-5 hours. The reacted system is washed with saturated brine, extracted with an extraction solvent (such as dichloromethane), the combined organic phases are concentrated, and then separated by column chromatography.
本发明中,化合物22和化合物14的制备为本领域技术人员熟知,本发明对化合物22和化合物14的制备不做特别的限制,可以参照本领域常规的方式进行。In the present invention, the preparation of compound 22 and compound 14 is well known to those skilled in the art, and the preparation of compound 22 and compound 14 is not particularly limited in the present invention, and can be carried out with reference to conventional methods in the art.
根据本发明的第一、第二缀合物,其中所述活性功能性寡核苷酸可选自以下核酸物质:小干扰RNA、微小RNA、单链RNA、反义核酸、诱导寡核苷酸、茎环RNA等。其中,所述功能性寡核苷酸为单链寡核苷酸或者双链寡核苷酸所组成。本发明中的小干扰RNA选自双链寡核苷酸,其中包含一个正义链和一个反义链,正义和反义链为互补,即在双链核酸分子中,一条链的碱基与另一条链上的碱基以氢键相互作用形成互补方式配对。According to the first and second conjugates of the present invention, wherein the active functional oligonucleotide can be selected from the following nucleic acid substances: small interfering RNA, microRNA, single-stranded RNA, antisense nucleic acid, inducing oligonucleotide , stem-loop RNA, etc. Wherein, the functional oligonucleotide is composed of single-stranded oligonucleotide or double-stranded oligonucleotide. The small interfering RNAs in the present invention are selected from double-stranded oligonucleotides, which include a sense strand and an antisense strand, and the sense and antisense strands are complementary, that is, in a double-stranded nucleic acid molecule, the bases of one strand and the other Bases on one strand pair in a complementary fashion through hydrogen bonding interactions.
本发明中,前述第一缀合物和第二缀合物均可以为核酸缀合物。优选情况下,所述核酸缀合物为包含以下序列的SiRNA缀合物:In the present invention, both the aforementioned first conjugate and second conjugate may be nucleic acid conjugates. Preferably, the nucleic acid conjugate is a siRNA conjugate comprising the following sequence:
SNK-17的序列Sequence of SNK-17
正义链(S):Chain of Justice (S):
5’-AfsmAsCfmAGfmUGfmUUfCfUfmUGfmCUfmCUfmAUfmAAf-EgGaGaGaC3(碱基序列如SQE ID NO:1所示)5'-AfsmAsCfmAGfmUGfmUUfCfUfmUGfmCUfmCUfmAUfmAAf-EgGaGaGaC3 (base sequence shown in SQE ID NO: 1)
反义链(AS):Antisense Strand (AS):
5’-mUsUfsmAUfmAGfmAGfmCAfmAmGmAAfmCAfmCUfmGUfmUsmUsmU(碱基序列如SQEID NO:2所示)5'-mUsUfsmAUfmAGfmAGfmCAfmAmGmAAfmCAfmCUfmGUfmUsmUsmU (base sequence shown in SQEID NO: 2)
SNK-18的序列:Sequence of SNK-18:
正义链(S):Chain of Justice (S):
5’-AfsmAsCfmAGfmUGfmUUfCfUfmUGfmCUfmCUfmAUfmAAf-TriGalNac(碱基序列如SQE ID NO:1所示)5'-AfsmAsCfmAGfmUGfmUUfCfUfmUGfmCUfmCUfmAUfmAAf-TriGalNac (base sequence shown in SQE ID NO: 1)
反义链(AS):Antisense Strand (AS):
5’-mUsUfsmAUfmAGfmAGfmCAfmAmGmAAfmCAfmCUfmGUfmUsmUsmU(碱基序列如SQEID NO:2所示)。5'-mUsUfsmAUfmAGfmAGfmCAfmAmGmAAfmCAfmCUfmGUfmUsmUsmU (the base sequence is shown in SQEID NO: 2).
本发明中,上述序列中修饰的核苷酸可以通过商购获得,也可以自行修饰,且核苷酸的修饰方式为本领域技术人员熟知的,可以参照本领域常规的方式进行,本发明不做特别的限制。In the present invention, the modified nucleotides in the above sequences can be obtained commercially, or can be modified by themselves, and the modification methods of nucleotides are well known to those skilled in the art, and can be carried out with reference to conventional methods in the art. The present invention does not make special restrictions.
本发明中,寡核苷酸缀合物可以采用如下方法制备,该方法包括在亚磷酰胺固相合成的条件下,分别按照所述寡核苷酸的核苷酸种类和顺序,按照3'到5'的方向将核苷单体依次连接,每个核苷单体的连接包括脱保护、偶联、盖帽、氧化或硫化四步反应;在一些实施方式中,所述方法还包含在偶联反应条件和偶联试剂存在下,将如式(101)所示的化合物与核苷单体或连接在固相载体上的核苷酸序列接触,从而使式(101)所示的化合物经偶联反应连接至核苷酸序列。其中,该方法还包含脱除保护基并与固相载体切割的步骤、分离纯化步骤、以及任选的退火步骤。In the present invention, the oligonucleotide conjugate can be prepared by the following method. The nucleoside monomers are sequentially connected in the direction of 5', and the connection of each nucleoside monomer includes a four-step reaction of deprotection, coupling, capping, oxidation or sulfurization; in some embodiments, the method further comprises: In the presence of coupling reaction conditions and coupling reagents, the compound represented by formula (101) is contacted with a nucleoside monomer or a nucleotide sequence linked to a solid support, so that the compound represented by formula (101) is The coupling reaction connects to the nucleotide sequence. Wherein, the method further comprises a step of removing the protecting group and cleaving with the solid phase carrier, a separation and purification step, and an optional annealing step.
本发明中,在将所有核苷单体连接之后,退火之前,该方法还包括分离出siRNA的正义链和反义链。分离的方法为本领域技术人员所公知,一般包括将合成得到的核苷酸序列从固相载体上切割下来,脱除碱基上、磷酸基上和配体上的保护基团,纯化和脱盐。In the present invention, after connecting all nucleoside monomers and before annealing, the method further includes separating the sense strand and antisense strand of the siRNA. The separation method is well known to those skilled in the art, and generally includes cutting the synthesized nucleotide sequence from the solid support, removing the protective groups on the base, the phosphate group and the ligand, purification and desalting. .
本发明中,上述siRNA缀合物的制备过程中涉及的方法和具体条件为本领域技术人员熟知的,可以参照本领域常规的方式进行。In the present invention, the methods and specific conditions involved in the preparation process of the above-mentioned siRNA conjugates are well known to those skilled in the art, and can be carried out with reference to conventional methods in the art.
本发明还提供了前述化合物M、缀合物在制备小核酸药物中的用途;The present invention also provides the use of the aforementioned compound M and the conjugate in the preparation of small nucleic acid drugs;
优选地,所述小核酸药物中的小核酸的特定靶点基因可以选自PCSK9、HBV、TTR、AGT等。Preferably, the specific target gene of the small nucleic acid in the small nucleic acid drug can be selected from PCSK9, HBV, TTR, AGT and the like.
以下将通过实施例对本发明进行详细描述。The present invention will be described in detail below by means of examples.
以下实施例中,在没有特别说明的情况下,所有商购获得的原料、试剂直接使用,不做进一步的处理。有机溶剂通过旋转蒸发器在减压下浓缩。In the following examples, unless otherwise specified, all commercially available raw materials and reagents were used directly without further processing. The organic solvent was concentrated under reduced pressure by rotary evaporator.
化合物(101)按照如下路线制备Compound (101) was prepared according to the following route
化合物2的合成Synthesis of Compound 2
N-乙酰半乳糖胺四乙酸盐1(10g,25.68mmol)室温溶解在二氯乙烷(60mL)中,将三氟甲磺酸三甲基甲硅烷基酯(8.6g,38.66mmol)搅拌加入到上述溶液中,继续搅拌并将此溶液加热到50℃。在50℃条件下反应2小时后,停止加热,继续在室温下搅拌12小时。将反应后的溶液倒入含饱和碳酸氢钠的冰水中,并用二氯甲烷萃取,有机相经水洗涤。分出有机相,加无水硫酸钠干燥,减压蒸干溶剂,得到棕黄色泡沫糖稀状化合物2。此化合物不必纯化,直接用于下一步反应。N-acetylgalactosamine tetraacetate 1 (10 g, 25.68 mmol) was dissolved in dichloroethane (60 mL) at room temperature, and trimethylsilyl trifluoromethanesulfonate (8.6 g, 38.66 mmol) was stirred Add to the above solution, continue stirring and heat this solution to 50°C. After reacting at 50°C for 2 hours, heating was stopped, and stirring was continued at room temperature for 12 hours. The reacted solution was poured into ice water containing saturated sodium bicarbonate, extracted with dichloromethane, and the organic phase was washed with water. The organic phase was separated, dried over anhydrous sodium sulfate, and the solvent was evaporated to dryness under reduced pressure to obtain Compound 2 in the form of a brown-yellow foam candy. This compound was used directly in the next reaction without purification.
化合物3的合成Synthesis of Compound 3
将化合物2(5g,15.18mmol)与四乙烯醇(29.49g,151.8mmol),对甲苯磺酸吡啶鎓(3.43g,13.66mmol)混合后,搅拌加热到80℃反应18小时。将反应溶液倒入体积比为1:1的饱和食盐水和饱和碳酸氢钠溶液中,用300mL的二氯甲烷萃取。分出有机相,加无水硫酸钠干燥,减压蒸到半干。用硅胶色谱纯化,使用一个梯度淋洗。先用二氯甲烷淋洗,然后用一个混合溶剂(二氯甲烷/甲醇,92:8,v/v)淋洗,减压抽干溶剂得到近白色的化合物3(3.61g,45.4%)。1H NMR(CDCl3):δ,6.79-6.77(1H,m),5.31-5.29(1H,m),5.11-5.08(1H,m),4.81-4.79(1H,m),4.22-4.10(7H,m),3.93-3.89(2H,m),3.86-3.81(1H,m),3.74-3.61(8H,m),2.17(3H,s),2.17-2.15(1H,s),2.12(4H,s),2.10(7H,m)。Compound 2 (5 g, 15.18 mmol) was mixed with tetravinyl alcohol (29.49 g, 151.8 mmol) and pyridinium p-toluenesulfonate (3.43 g, 13.66 mmol), and heated to 80° C. with stirring for 18 hours. The reaction solution was poured into saturated brine and saturated sodium bicarbonate solution in a volume ratio of 1:1, and extracted with 300 mL of dichloromethane. The organic phase was separated, dried over anhydrous sodium sulfate, and evaporated to semi-dryness under reduced pressure. Purify by silica gel chromatography using a gradient elution. Rinse with dichloromethane first, then with a mixed solvent (dichloromethane/methanol, 92:8, v/v), and dry the solvent under reduced pressure to obtain nearly white compound 3 (3.61 g, 45.4%). 1 H NMR (CDCl 3 ): δ, 6.79-6.77(1H,m), 5.31-5.29(1H,m), 5.11-5.08(1H,m), 4.81-4.79(1H,m), 4.22-4.10( 7H,m), 3.93-3.89(2H,m), 3.86-3.81(1H,m), 3.74-3.61(8H,m), 2.17(3H,s), 2.17-2.15(1H,s), 2.12( 4H,s), 2.10(7H,m).
1-O-二甲氧基三苯甲基-1,3-丙二醇(A-1)的合成Synthesis of 1-O-Dimethoxytrityl-1,3-propanediol (A-1)
将4,4'-二甲氧基三苯甲基氯(18g,0.053mol)溶解到至混合溶剂中(40mL的二氯甲烷,8.7mL的三乙胺,0.1mL的4-(二甲氨基)吡啶)。将1,3-丙二醇(21g,0.265mol)逐滴搅拌加入至上述溶液中,继续在室温下搅拌12小时。将反应液倒入100mL饱和食盐水中,用300mL的二氯甲烷萃取,分出有机相,加无水硫酸钠干燥,减压蒸到半干。用硅胶色谱柱纯化,使用一个梯度淋洗,先用混合溶剂(正己烷/乙酸乙酯,3:1,v/v)淋洗,然后用另一个混合溶剂(正己烷/乙酸乙酯,1:1,v/v)淋洗,减压抽干溶剂得到橙色的化合物1-O-二甲氧基三苯甲基-1,3-丙二醇(16g,80%)。1H NMR(CDCl3):δ,7.43-7.41(2H,m),7.33-7.27(6H,m),7.29-7.27(1H,m),6.85-6.82(4H,m),3.79-3.75(7H,m),3.29-3.27(2H,m),2.20-2.18(1H,br),1.88-1.83(2H,br),1.57(1H,s)。4,4'-Dimethoxytrityl chloride (18 g, 0.053 mol) was dissolved in a mixed solvent (40 mL of dichloromethane, 8.7 mL of triethylamine, 0.1 mL of 4-(dimethylamino) ) pyridine). 1,3-Propanediol (21 g, 0.265 mol) was added dropwise to the above solution with stirring, and stirring was continued at room temperature for 12 hours. The reaction solution was poured into 100 mL of saturated brine, extracted with 300 mL of dichloromethane, the organic phase was separated, dried over anhydrous sodium sulfate, and evaporated to semi-dryness under reduced pressure. Purified by silica gel column chromatography, using a gradient elution, first with mixed solvent (n-hexane/ethyl acetate, 3:1, v/v), then with another mixed solvent (n-hexane/ethyl acetate, 1 : 1, v/v) rinsed, and the solvent was dried under reduced pressure to obtain an orange compound 1-O-dimethoxytrityl-1,3-propanediol (16 g, 80%). 1 H NMR (CDCl 3 ): δ, 7.43-7.41(2H,m), 7.33-7.27(6H,m), 7.29-7.27(1H,m), 6.85-6.82(4H,m), 3.79-3.75( 7H,m), 3.29-3.27(2H,m), 2.20-2.18(1H,br), 1.88-1.83(2H,br), 1.57(1H,s).
化合物(101)的合成Synthesis of Compound (101)
将化合物3(687mg,1.31mmol)解在10mL的干燥二氯甲烷,然后迅速将N,N,N’N’-四异丙基氯亚磷酸酯(570mg,2.1mmol)和二异丙基乙胺(550mg,4.2mmol)加入到上面的溶液中。上述反应溶液在氮气保护下室温中搅拌20分钟。将1-O-二甲氧基三苯甲基-1,3-丙二醇(800mg,2.1mmol)溶解至5mL干燥二氯甲烷,然后倒入上述溶液中,同时加入乙硫四唑(70mg,0.525mmol),继续在室温氮气保护下搅拌反应2小时。将反应后的溶液倒入饱和食盐水中,用2×60mL的二氯甲烷萃取,分出有机相,加无水硫酸钠干燥,减压蒸到半干。用硅胶色谱纯化,使用一个梯度淋洗,先用混合溶剂(正己烷/乙酸乙酯/三乙胺,48:48;4,v/v/v)淋洗,然后用另一个混合溶剂(乙酸乙酯/三乙胺,96:4,v/v)淋洗,减压抽干溶剂得到一个透明泡沫近白色的化合物101。1H NMR(CD3CN):δ,7.44-7.42(3H,m),7.32-7.30(6H,m),7.29-7.21(1H,m),6.87-6.84(4H,m),6.50(1H,m),5.28-5.27(1H,m),5.00-4.97(1H,m),4.65-4.63(1H,m),4.11-4.09(3H,m),4.07-4.06(3H,m),3.97-3.95(1H,m),3.76(6H,s),3.69-3.57(6H,m),3.56-3.50(8H,m),3.11-3.10(2H,m),2.21(4H,s),1.98(3H,s),1.97(3H,s),1.94(3H,s),1.85(4H,s),1.37-1.34(1H,m),1.28-1.27(1H,m),1.20(4H,m),1.14(4H,m),1.12(1H,m)。31P NMR(CD3CN):δ,147.95,147.41ppm。HRMS(ESI)m/z,C52H75N2O17P(M+Na++H+)/2理论值:527.56,实测值:527.20.Compound 3 (687 mg, 1.31 mmol) was dissolved in 10 mL of dry dichloromethane, and then N,N,N'N'-tetraisopropyl chlorophosphite (570 mg, 2.1 mmol) and diisopropylethyl acetate were rapidly dissolved. Amine (550 mg, 4.2 mmol) was added to the above solution. The above reaction solution was stirred at room temperature for 20 minutes under nitrogen protection. 1-O-Dimethoxytrityl-1,3-propanediol (800 mg, 2.1 mmol) was dissolved in 5 mL of dry dichloromethane, and then poured into the above solution, and at the same time, ethylthiotetrazole (70 mg, 0.525 mmol) was added. mmol) and continued to stir the reaction for 2 hours at room temperature under nitrogen protection. The reacted solution was poured into saturated brine, extracted with 2×60 mL of dichloromethane, the organic phase was separated, dried over anhydrous sodium sulfate, and evaporated to semi-dryness under reduced pressure. Purified by silica gel chromatography using a gradient of first with a mixed solvent (n-hexane/ethyl acetate/triethylamine, 48:48; 4, v/v/v) and then with another mixed solvent (acetic acid Ethyl ester/triethylamine, 96:4, v/v) rinsed, and the solvent was sucked dry under reduced pressure to obtain compound 101 as a transparent foam and nearly white. 1 H NMR (CD 3 CN): δ, 7.44-7.42(3H,m), 7.32-7.30(6H,m), 7.29-7.21(1H,m), 6.87-6.84(4H,m), 6.50(1H) ,m),5.28-5.27(1H,m),5.00-4.97(1H,m),4.65-4.63(1H,m),4.11-4.09(3H,m),4.07-4.06(3H,m),3.97 -3.95(1H,m),3.76(6H,s),3.69-3.57(6H,m),3.56-3.50(8H,m),3.11-3.10(2H,m),2.21(4H,s),1.98 (3H,s),1.97(3H,s),1.94(3H,s),1.85(4H,s),1.37-1.34(1H,m),1.28-1.27(1H,m),1.20(4H,m) ), 1.14(4H,m), 1.12(1H,m). 31 P NMR (CD 3 CN): δ, 147.95, 147.41 ppm. HRMS(ESI) m/z, C 52 H 75 N 2 O 17 P(M+Na + +H + )/2 Theoretical value: 527.56, found value: 527.20.
缀合物(603A)的合成Synthesis of Conjugate (603A)
1、化合物7按照以下路线制备1. Compound 7 was prepared according to the following route
化合物恶唑啉5的合成Synthesis of Compound Oxazoline 5
N-乙酰半乳糖胺四乙酸盐4(10g,25.68mmol)室温溶解在二氯乙烷(60mL)中,将三氟甲磺酸三甲基甲硅烷基酯(8.6g,38.66mmol)搅拌加入到上述溶液中,继续搅拌并将此溶液加热到50℃。在50℃下反应2小时后,停止加热,继续在室温下搅拌12小时。将溶液倒入含饱和碳酸氢钠的冰水中,用二氯甲烷萃取,有机相经过水洗涤。分出有机相,加无水硫酸钠干燥,减压蒸干,得到棕黄色泡沫糖稀状化合物5。此化合物5直接用于下一步反应。N-acetylgalactosamine tetraacetate 4 (10 g, 25.68 mmol) was dissolved in dichloroethane (60 mL) at room temperature, and trimethylsilyl trifluoromethanesulfonate (8.6 g, 38.66 mmol) was stirred Add to the above solution, continue stirring and heat this solution to 50°C. After reacting at 50°C for 2 hours, heating was stopped and stirring was continued at room temperature for 12 hours. The solution was poured into ice water containing saturated sodium bicarbonate, extracted with dichloromethane, and the organic phase was washed with water. The organic phase was separated, dried over anhydrous sodium sulfate, and evaporated to dryness under reduced pressure to obtain Compound 5 in the form of a brown-yellow foam sugar. This compound 5 was directly used in the next reaction.
化合物6的合成Synthesis of compound 6
化合物恶唑啉5(4.26g,12.9mmol)室温溶解在二氯甲烷(20mL)中,在0℃条件下与溶解有叠氮-三聚乙二醇(3.4g,19mmol)的干燥二氯甲烷(20mL)的溶液混合搅拌。在0℃条件下缓慢加入三甲硅烷基三氟甲磺酸酯(TMSOTf,1.4g,6.45mmol)至上述溶液中并持续搅拌一小时。混合溶液继续在室温下搅拌14小时,然后将溶液到入含饱和碳酸氢钠的冰水中,用二氯甲烷萃取(2×50mL),有机相经过水洗涤。分出有机相,加无水硫酸钠干燥,减压旋蒸浓缩至半干。用硅胶色谱柱继续纯化,使用一个梯度淋洗,先用混合溶剂(乙酸乙酯/甲醇,10:1,v/v)淋洗,收集产物组分,减压抽干溶剂得到近白色的化合物6(5.3g,81%)1H NMR(CDCl3):δ,6.15(d,1H,NH),5.32(d,1H,sugar-H-4’),5.07(dd,1H,J=11.2Hz,J=3.3Hz,sugar-H-3’),4.76(d,1H,J=8.6Hz,sugar-H-1’),4.17(m,3H,sugar-H-2’,sugar-H-6’),3.91(m,2H,-CH2O),3.89(m,1H,suager-H-5’),3.76-3.61(m,8H,-CH2O),3.47(m,2H,-CH2N3),2.16(s,3H,-CH3,NHAc),1.99,2.00,2.05(3xs,9H,-CH3,Ac).HRMS(ESI)m/z,C20H32N4O11(M+H+)理论值:505.49,实测值:505.20.Compound oxazoline 5 (4.26 g, 12.9 mmol) was dissolved in dichloromethane (20 mL) at room temperature, and was dissolved with azide-tripolyethylene glycol (3.4 g, 19 mmol) in dry dichloromethane at 0 °C. (20 mL) of the solution was mixed and stirred. Trisilyl trifluoromethanesulfonate (TMSOTf, 1.4 g, 6.45 mmol) was slowly added to the above solution at 0°C and stirring was continued for one hour. The mixed solution was continued to stir at room temperature for 14 hours, then the solution was poured into ice water containing saturated sodium bicarbonate, extracted with dichloromethane (2 x 50 mL), and the organic phase was washed with water. The organic phase was separated, dried over anhydrous sodium sulfate, and concentrated to semi-dryness by rotary evaporation under reduced pressure. Continue to purify with silica gel column, use a gradient elution, first elute with mixed solvent (ethyl acetate/methanol, 10:1, v/v), collect product components, and dry the solvent under reduced pressure to obtain a nearly white compound 6 (5.3g, 81%) 1 H NMR (CDCl 3 ): δ, 6.15 (d, 1H, NH), 5.32 (d, 1H, sugar-H-4'), 5.07 (dd, 1H, J=11.2 Hz,J=3.3Hz,sugar-H-3'),4.76(d,1H,J=8.6Hz,sugar-H-1'),4.17(m,3H,sugar-H-2',sugar-H -6'), 3.91(m, 2H, -CH 2 O), 3.89(m, 1H, suager-H-5'), 3.76-3.61(m, 8H, -CH 2 O), 3.47(m, 2H ,-CH 2 N 3 ), 2.16(s,3H,-CH 3 ,NHAc),1.99,2.00,2.05(3xs,9H,-CH 3 ,Ac).HRMS(ESI)m/z,C 20 H 32 N 4 O 11 (M+H + ) theoretical value: 505.49, measured value: 505.20.
化合物7的合成Synthesis of compound 7
叠氮化合物6(522mg,1.04mmol)溶解于10mL的乙酸乙酯中,Pd/C(80mg),在氮气的保护下加入30mL的乙酸乙酯中。将反应瓶接通氢气球,经过多次氢气置换,在室温下,反应瓶与氢气球接通,反应溶液持续搅拌3小时。将Pd/C通过Celite过滤后,在反应瓶中缓慢滴加0.5mL的盐酸(2M),溶液在持续搅拌下反应30分钟,反应温度为0℃。在反应溶液中加入10mL的乙腈,共沸减压浓缩两次。将浓缩的溶液与二氯甲烷(10mL)混合,再次减压浓缩两次,得到一油状泡沫状粗产物7(500mg),该粗产物将直接用于下一步反应,不需进一步纯化。1H NMR(CDCl3):δ,8.25(m,2H,-NH2),5.34(d,1H,sugar-H-4’),5.21(dd,1H,J=11.2Hz,J=3.3Hz,sugar-H-3’),4.91(d,1H,J=8.5Hz,sugar-H-1’),4.12(m,3H,sugar-H-6’,sugar-H-2’),4.07(m,2H,sugar-H-5’,-NH),3.76(m,2H,-CH2O),3.68(m,2H,-CH2O),3.61(m,2H,-CH2O),3.58(m,4H,2x-CH2O),3.20(m,2H,NH2),2.09(s,3H,-NHCO2CH3),2.04,1.96,1.89(3x s,9H,-CO2CH3).HRMS(ESI)m/z,C20H34N2O11(M+H+)理论值:479.49,实测值:479.20.Azide 6 (522 mg, 1.04 mmol) was dissolved in 10 mL of ethyl acetate, Pd/C (80 mg), and added to 30 mL of ethyl acetate under nitrogen protection. The reaction flask was connected to a hydrogen balloon, and after repeated hydrogen replacement, the reaction flask was connected to the hydrogen balloon at room temperature, and the reaction solution was continuously stirred for 3 hours. After the Pd/C was filtered through Celite, 0.5 mL of hydrochloric acid (2M) was slowly added dropwise to the reaction flask, and the solution was reacted under continuous stirring for 30 minutes at a reaction temperature of 0°C. 10 mL of acetonitrile was added to the reaction solution, and the mixture was azeotropically concentrated under reduced pressure twice. The concentrated solution was mixed with dichloromethane (10 mL) and concentrated again under reduced pressure twice to give crude product 7 (500 mg) as an oily foam, which was used directly in the next reaction without further purification. 1 H NMR (CDCl 3 ): δ, 8.25 (m, 2H, -NH 2 ), 5.34 (d, 1H, sugar-H-4'), 5.21 (dd, 1H, J=11.2 Hz, J=3.3 Hz ,sugar-H-3'),4.91(d,1H,J=8.5Hz,sugar-H-1'),4.12(m,3H,sugar-H-6',sugar-H-2'),4.07 (m,2H,sugar-H-5',-NH),3.76(m,2H, -CH2O ),3.68(m,2H, -CH2O ),3.61(m,2H, -CH2O ), 3.58(m, 4H, 2x-CH 2 O), 3.20(m, 2H, NH 2 ), 2.09(s, 3H, -NHCO 2 CH 3 ), 2.04, 1.96, 1.89(3x s, 9H, - CO 2 CH 3 ).HRMS (ESI) m/z, C 20 H 34 N 2 O 11 (M+H + ) Theoretical value: 479.49, found value: 479.20.
2、化合物12按照以下路线制备2. Compound 12 was prepared according to the following route
化合物9的合成Synthesis of compound 9
三羟甲基氨基甲烷8(10g,82.6mmol)溶解在15mL的二恶烷中,在反应溶液中搅拌滴加1.26mL的40wt%氢氧化钾水溶液,并继续在室温下加入20mL的二恶烷。在0℃下,向反应瓶中慢慢滴加丙烯腈(18mL,272mmol),整个滴加过程大约1小时。反应溶液继续在室温下搅拌24小时。将反应溶液倒入饱和氯化钠的水溶液中,用二氯甲烷萃取(2×50mL),有机相经过水洗涤。分出有机相,加无水硫酸钠干燥,减压旋蒸浓缩至半干。用硅胶色谱柱继续纯化,先用二氯甲烷淋洗,然后使用一个混合溶剂(二氯甲烷/甲醇,10:1,v/v)淋洗,收集产物组分。经过旋蒸减压浓缩,得到浅黄色油状物9(20g,86%)。1H NMR(CDCl3):δ,3.68(t,6H,J=7.1Hz,3x-CH2O),3.44(s,6H,3x-CH2CNH2),2.61(t,6H,J=6.2Hz,3x–CH2CN),1.70(s,2H,-NH2).HRMS(ESI)m/z,C13H20N4O3(M+H+)理论值:281.32,实测值:281.20.Tris (10 g, 82.6 mmol) was dissolved in 15 mL of dioxane, 1.26 mL of 40 wt% potassium hydroxide aqueous solution was added dropwise to the reaction solution, and 20 mL of dioxane was added at room temperature. . At 0°C, acrylonitrile (18 mL, 272 mmol) was slowly added dropwise to the reaction flask for about 1 hour. The reaction solution was continuously stirred at room temperature for 24 hours. The reaction solution was poured into saturated aqueous sodium chloride solution, extracted with dichloromethane (2 x 50 mL), and the organic phase was washed with water. The organic phase was separated, dried over anhydrous sodium sulfate, and concentrated to semi-dryness by rotary evaporation under reduced pressure. Purification was continued with a silica gel column eluting first with dichloromethane and then a mixed solvent (dichloromethane/methanol, 10:1, v/v) to collect the product fractions. Concentration under reduced pressure by rotary evaporation gave 9 (20 g, 86%) as a pale yellow oil. 1 H NMR (CDCl 3 ): δ, 3.68 (t, 6H, J=7.1 Hz, 3x-CH 2 O), 3.44 (s, 6H, 3x-CH 2 CNH 2 ), 2.61 (t, 6H, J= 6.2Hz,3x–CH 2 CN),1.70(s,2H,-NH 2 ).HRMS(ESI)m/z,C 13 H 20 N 4 O 3 (M+H + )Theoretical: 281.32, found :281.20.
化合物10的合成Synthesis of Compound 10
三[(氰基乙氧基)甲基]氨基甲烷9(1.2g,4.28mmol)溶解在10mL的无水乙醇中,在室温下,缓慢向反应瓶中的溶液滴加2mL的浓硫酸和10mL的无水乙醇。反应溶液加热至80℃,保持反应溶液呈回流状态约36小时。将反应溶液冷却至室温后,加入25mL饱和碳酸氢钠冰溶液。减压旋蒸,将乙醇蒸出。水溶液用乙酸乙酯(2×50mL)进行萃取,所得的有机相经过无水硫酸钠干燥后,再经过减压旋蒸浓缩得到浅黄色的油状物10(0.8g,46%),此粗产物直接用于下一步反应,不需进一步纯化。Tris[(cyanoethoxy)methyl]aminomethane 9 (1.2 g, 4.28 mmol) was dissolved in 10 mL of absolute ethanol, and 2 mL of concentrated sulfuric acid and 10 mL of concentrated sulfuric acid were slowly added dropwise to the solution in the reaction flask at room temperature. of anhydrous ethanol. The reaction solution was heated to 80°C, and the reaction solution was kept at reflux for about 36 hours. After cooling the reaction solution to room temperature, 25 mL of saturated sodium bicarbonate ice solution was added. Rotary evaporated under reduced pressure, and the ethanol was evaporated. The aqueous solution was extracted with ethyl acetate (2×50 mL), the obtained organic phase was dried over anhydrous sodium sulfate, and then concentrated by rotary evaporation under reduced pressure to obtain light yellow oil 10 (0.8 g, 46%), the crude product Used directly in the next reaction without further purification.
化合物11的合成Synthesis of Compound 11
将粗产物化合物10(0.8g,1.9mmol)溶解在20mL的二氯甲烷中。在反应溶液中加入二碳酸二叔丁酯(2mL,8.8mmol)和5mL的三乙胺。在室温下,搅拌反应溶液14小时。将反应溶液倒入含饱和碳酸氢钠的水溶液中,用二氯甲烷萃取(2×50mL),有机相经过水洗涤。分出有机相,加无水硫酸钠干燥,减压旋蒸浓缩至半干,用硅胶色谱柱继续纯化,使用一个梯度淋洗,先用二氯甲烷溶剂洗涤,然后用(二氯甲烷/甲醇,96:4,v/v)淋洗,收集产物组分,减压抽干溶剂得到近白色的油状物11(0.5g,51%),1H NMR(CDCl3):δ,4.92(b,1H,-CONH-),4.14(m,3x2H,-CO2CH2-),3.69(m,3x2H,-OCH2-),3.63(s,3x2H,-OCH2-),2.53(m,3x2H,-COCH2-),1.45(s,3x3H,-CH3),1.26(t,3x3H,-CH2CH3).HRMS(ESI)m/z,C24H43NO11(M+H+)理论值:522.60,实测值:522.40.The crude compound 10 (0.8 g, 1.9 mmol) was dissolved in 20 mL of dichloromethane. To the reaction solution were added di-tert-butyl dicarbonate (2 mL, 8.8 mmol) and 5 mL of triethylamine. The reaction solution was stirred for 14 hours at room temperature. The reaction solution was poured into an aqueous solution containing saturated sodium bicarbonate, extracted with dichloromethane (2 x 50 mL), and the organic phase was washed with water. The organic phase was separated, dried over anhydrous sodium sulfate, concentrated to semi-dryness by rotary evaporation under reduced pressure, continued to purify with a silica gel chromatographic column, and eluted with a gradient, first washed with dichloromethane solvent, and then with (dichloromethane/methanol) , 96:4, v/v) rinsed, the product components were collected, and the solvent was evaporated under reduced pressure to obtain a nearly white oily substance 11 (0.5 g, 51%), 1 H NMR (CDCl 3 ): δ, 4.92 (b ,1H,-CONH-),4.14(m,3x2H,-CO 2 CH 2 -),3.69(m,3x2H,-OCH 2 -),3.63(s,3x2H,-OCH 2 -),2.53(m, 3x2H, -COCH 2 -), 1.45(s, 3x3H, -CH 3 ), 1.26(t, 3x3H, -CH 2 CH 3 ).HRMS (ESI) m/z, C 24 H 43 NO 11 (M+H + ) Theoretical value: 522.60, measured value: 522.40.
化合物12的合成Synthesis of Compound 12
将Boc保护的化合物11(0.6g,1.43mmol)溶解在20mL的无水乙醇中,缓慢向反应溶液中滴加4mL的氢氧化钠(4M),保持反应溶液在0℃,并搅拌14小时。用液质时时监控反应进程,待反应物的峰消失,减压旋蒸,将乙醇蒸出后,将10mL硫酸氢钾(1M)加入反应溶液中继续搅拌15分钟在0℃。上述反应溶液用乙酸乙酯(2×50mL)进行萃取,所得的有机相经过无水硫酸钠干燥后,再经过减压旋蒸浓缩得到一个粘稠状物12(0.5g,81%),此粗产物直接用于下一步反应,不需进一步纯化。1H NMR(CDCl3):d,9.40(b,3H,-CO2H),5.0(b,1H,-CONH-),3.70(m,m,3x2H,-OCH2-),3.65(s,3x2H,-OCH2-),2.60(m,3x2H,-COCH2-),1.42(s,3x3H,-CH3).HRMS(ESI)m/z,C18H31NO11(M+H+)理论值:438.32,实测值:438.20.The Boc-protected compound 11 (0.6 g, 1.43 mmol) was dissolved in 20 mL of absolute ethanol, 4 mL of sodium hydroxide (4M) was slowly added dropwise to the reaction solution, the reaction solution was kept at 0°C, and stirred for 14 hours. The reaction progress was monitored by liquid quality from time to time. When the peaks of the reactants disappeared, rotary-evaporated under reduced pressure. After the ethanol was evaporated, 10 mL of potassium hydrogen sulfate (1M) was added to the reaction solution and stirred for 15 minutes at 0°C. The above reaction solution was extracted with ethyl acetate (2×50 mL), and the obtained organic phase was dried over anhydrous sodium sulfate, and then concentrated by rotary evaporation under reduced pressure to obtain a viscous substance 12 (0.5 g, 81%). The crude product was used directly in the next reaction without further purification. 1H NMR (CDCl3): d, 9.40 (b, 3H, -CO 2 H), 5.0 (b, 1H, -CONH-), 3.70 (m, m, 3x2H, -OCH 2 -), 3.65 (s, 3x2H ,-OCH 2 -),2.60(m,3x2H,-COCH 2 -),1.42(s,3x3H,-CH 3 ).HRMS(ESI)m/z,C 18 H 31 NO 11 (M+H + ) Theoretical value: 438.32, measured value: 438.20.
化合物14按照以下路线制备Compound 14 was prepared according to the following route
化合物13的合成Synthesis of Compound 13
将三羧酸12(0.5g,1.14mmol)溶解在20mL的二氯甲烷,并加入2-(7-偶氮苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(1.3g,3.42mmol)和N,N-二异丙基乙胺(0.2g,3.95mmol),同时加入8mL的二甲基甲酰胺。将化合物胺7(2.19g,4.08mmol)溶解在5mL的二甲基甲酰胺中,并加入1mL的N,N-二异丙基乙胺。将上述两种溶液在室温下混合搅拌,并持续搅拌14小时。经过层析色谱检测,确定反应物完全消失。将20mL的饱和碳酸氢钠水溶液加入反应溶液中,并用2×50mL的二氯甲烷进行萃取,有机相经过旋蒸浓缩至半干,用硅胶色谱柱继续纯化,使用一个梯度淋洗,先用二氯甲烷溶剂洗涤,然后用(二氯甲烷/甲醇,85:15,v/v)淋洗,收集产物组分,减压抽干溶剂得到近黄色的油状粗品13(2g,86%).将粗产物13进一步用反相色谱柱纯化,淋洗溶剂为(H2O/MeOH,1:1,v/v),收集产物组分,经过旋蒸浓缩至全干,得到化合物13(1.24g,60%)。1H NMR(CDCl3):δ,5.32(d,3H,J=3.0Hz,sugar-H-4’),5.18(dd,3H,sugar-H-3’),4.78(d,3H,sugar-H-1’),4.18-4.06(m,24H,-OCH2,sugar-H-5’),3.93(m,9H,sugar-2xH-6’,sugar-H-2’),3.77,3.64,3.46(m,6H,-CH2NH-),2.44,2.20(m,6H,-COCH2-),2.15(s,9H,-NHCOCH3),2.09(s,2H,-CH2-),2.05,1.99,1.95(3xs,27H,-OCOCH3),1.81(s,9H,CH3,Boc).HRMS(ESI)m/z,C78H127N7O41(M+2H+)/2,理论值:910.1,实测值:910.0.Tricarboxylic acid 12 (0.5 g, 1.14 mmol) was dissolved in 20 mL of dichloromethane, and 2-(7-azobenzotriazole)-N,N,N',N'-tetramethylurea was added Hexafluorophosphate (1.3 g, 3.42 mmol) and N,N-diisopropylethylamine (0.2 g, 3.95 mmol) were added simultaneously with 8 mL of dimethylformamide. Compound amine 7 (2.19 g, 4.08 mmol) was dissolved in 5 mL of dimethylformamide, and 1 mL of N,N-diisopropylethylamine was added. The two solutions were mixed and stirred at room temperature, and the stirring was continued for 14 hours. After chromatographic detection, it was determined that the reactant completely disappeared. 20 mL of saturated aqueous sodium bicarbonate solution was added to the reaction solution, and extracted with 2 × 50 mL of dichloromethane. The organic phase was concentrated to semi-dryness by rotary evaporation, and purified by silica gel column. Washed with chloromethane solvent, then rinsed with (dichloromethane/methanol, 85:15, v/v), the product components were collected, and the solvent was vacuumed to dryness to obtain a near-yellow oily crude product 13 (2 g, 86%). The crude product 13 was further purified by reversed-phase chromatography, the elution solvent was (H 2 O/MeOH, 1:1, v/v), the product components were collected, and concentrated to complete dryness through rotary evaporation to obtain compound 13 (1.24 g , 60%). 1 H NMR (CDCl 3 ): δ, 5.32 (d, 3H, J=3.0 Hz, sugar-H-4'), 5.18 (dd, 3H, sugar-H-3'), 4.78 (d, 3H, sugar -H-1'),4.18-4.06(m,24H,-OCH 2 ,sugar-H-5'),3.93(m,9H,sugar-2xH-6',sugar-H-2'),3.77, 3.64, 3.46(m, 6H, -CH 2 NH-), 2.44, 2.20(m, 6H, -COCH 2 -), 2.15(s, 9H, -NHCOCH 3 ), 2.09(s, 2H, -CH 2 - ), 2.05, 1.99, 1.95(3xs, 27H, -OCOCH 3 ), 1.81(s, 9H, CH 3 , Boc).HRMS(ESI) m/z, C 78 H 127 N 7 O 41 (M+2H + )/2, theoretical value: 910.1, measured value: 910.0.
化合物14的合成Synthesis of compound 14
将纯化的化合物13(2g,1.1mmol)溶解在30mL的二氯甲烷中,缓慢将1mL的盐酸溶液(4M)和1mL的二恶烷在0℃的温度下加入至上述的二氯甲烷反应液中。上述反应溶液在0℃的温度下持续搅拌30分钟,然后在室温下继续搅拌30分钟。旋蒸浓缩至全干,得到白色泡沫状粗产物14(1.7g,90%),粗产物直接用于下一步反应,不需进一步纯化。1H NMR(CDCl3):δ,8.20(b,2H,-NH2),5.35(d,3H,J=3.0Hz,sugar-H-4’),5.22(dd,3H,sugar-H-3’),4.80(d,3H,sugar-H-1’),4.13(m,9H,sugar-2xH-6’,sugar-H-2’),3.94-3.44(m,24H,-OCH2,sugar-H-5’),3.77,3.64,3.46(m,6H,-CH2NH-),2.55,2.43(m,6H,-COCH2-),2.15(s,9H,-NHCOCH3),2.09(s,2H,-CH2-),2.05,1.98,1.96(3xs,27H,-OCOCH3).HRMS(ESI)m/z,C73H119N7O39(M+H+)/2,理论值:860.4,实测值:860.0.The purified compound 13 (2 g, 1.1 mmol) was dissolved in 30 mL of dichloromethane, and 1 mL of hydrochloric acid solution (4M) and 1 mL of dioxane were slowly added to the above-mentioned dichloromethane reaction solution at a temperature of 0 °C middle. The above reaction solution was continuously stirred at a temperature of 0°C for 30 minutes and then at room temperature for 30 minutes. It was concentrated to complete dryness by rotary evaporation to obtain a white foamy crude product 14 (1.7 g, 90%), which was directly used in the next reaction without further purification. 1 H NMR (CDCl 3 ): δ, 8.20 (b, 2H, -NH 2 ), 5.35 (d, 3H, J=3.0 Hz, sugar-H-4'), 5.22 (dd, 3H, sugar-H- 3'), 4.80(d, 3H, sugar-H-1'), 4.13(m, 9H, sugar-2xH-6', sugar-H-2'), 3.94-3.44(m, 24H, -OCH 2 ,sugar-H-5'),3.77,3.64,3.46(m,6H,-CH 2 NH-),2.55,2.43(m,6H,-COCH 2 -),2.15(s,9H,-NHCOCH 3 ) ,2.09(s,2H,-CH 2 -),2.05,1.98,1.96(3xs,27H,-OCOCH 3 ).HRMS(ESI)m/z,C 73 H 119 N 7 O 39 (M+H + ) /2, theoretical value: 860.4, measured value: 860.0.
化合物21按照以下路线制备Compound 21 was prepared according to the following route
化合物16的合成Synthesis of compound 16
将4,4'-二甲氧基三苯甲基氯(1.8g,5.3mmol)溶解在5mL的二氯甲烷中,在室温条件下,将此溶液缓慢滴加入含有3-羟基-2-羟基甲基-2-甲基-丙酸15(0.8g,5.97mmol)的无水吡啶(10mL)溶液中。在室温条件下持续搅拌上述溶液14小时。将20mL水加入到反应混合物中,用2×50mL的乙酸乙酯进行萃取。有机相经过旋蒸浓缩至半干,用硅胶色谱柱继续纯化,使用一个梯度淋洗,先用正己烷溶剂洗涤,然后用(正己烷/乙酸乙酯,1:1,v/v)淋洗,收集产物组分,减压抽干溶剂得到黄色固体16(1.5g,58%).产物16直接用于下一步反应。4,4'-Dimethoxytrityl chloride (1.8 g, 5.3 mmol) was dissolved in 5 mL of dichloromethane, and this solution was slowly added dropwise to the solution containing 3-hydroxy-2-hydroxyl group at room temperature. Methyl-2-methyl-propionic acid 15 (0.8 g, 5.97 mmol) in dry pyridine (10 mL). The above solution was continuously stirred for 14 hours at room temperature. 20 mL of water was added to the reaction mixture and extracted with 2 x 50 mL of ethyl acetate. The organic phase was concentrated to semi-dryness by rotary evaporation, and was further purified by silica gel chromatography, using a gradient elution, first with n-hexane solvent, and then with (n-hexane/ethyl acetate, 1:1, v/v) , the product components were collected, and the solvent was drained under reduced pressure to obtain a yellow solid 16 (1.5 g, 58%). The product 16 was directly used in the next reaction.
化合物19的合成Synthesis of compound 19
将己二酸单甲酯17(0.16g,1mmol)和N-(叔丁氧羰基)-1,3-二氨基丙烷N-(3-氨基丙基)氨基甲酸叔丁酯18(0.174g,1mmol)在室温条件下溶解在5mL的无水四氢呋喃中。将上述溶液与0.892mL的1-丙基磷酸环酐(0.892mL,1.5mmol,在50%(体积比例1:1)乙酸乙酯)和0.522mL的N,N-二异丙基乙胺(DIPEA,0.522mL,3mmol)混合。将上述混合的反应溶液在室温下持续搅拌30分钟,然后向反应溶液中加入20mL的乙酸乙酯稀释,同时加入20mL的饱和食盐水,并用2×20mL的乙酸乙酯进行萃取。分出有机相,加无水硫酸钠干燥,旋蒸浓缩至全干,得到淡黄色泡沫状粗产物19(0.29g,91%),粗产物19直接用于下一步反应,不需进一步纯化。1H NMR(CDCl3),δ,5.89(b,1H,-CONH-),4.97(b,1H,-NHCO-),3.75(s,3H,-CH3),3.27(m,2H),3.15(m,2H),2.34(m,2H),2.19(m,2H),1.67(m 2x2H),1.64(m,2H),1.4(s,9H).HRMS(ESI)m/z,C15H28N2O5,理论值:316.39,实测值:316.40.Monomethyl adipate 17 (0.16 g, 1 mmol) and N-(tert-butoxycarbonyl)-1,3-diaminopropane tert-butyl N-(3-aminopropyl)carbamate 18 (0.174 g, 1 mmol) was dissolved in 5 mL of anhydrous tetrahydrofuran at room temperature. The above solution was mixed with 0.892 mL of 1-propylphosphoric acid cyclic anhydride (0.892 mL, 1.5 mmol, in 50% (volume ratio 1:1) ethyl acetate) and 0.522 mL of N,N-diisopropylethylamine ( DIPEA, 0.522 mL, 3 mmol) were mixed. The mixed reaction solution was stirred at room temperature for 30 minutes, then 20 mL of ethyl acetate was added to the reaction solution to dilute, 20 mL of saturated brine was added, and extraction was performed with 2×20 mL of ethyl acetate. The organic phase was separated, dried over anhydrous sodium sulfate, and concentrated to dryness by rotary evaporation to obtain a pale yellow foamy crude product 19 (0.29 g, 91%). The crude product 19 was directly used in the next reaction without further purification. 1 H NMR (CDCl 3 ), δ, 5.89 (b, 1H, -CONH-), 4.97 (b, 1H, -NHCO-), 3.75 (s, 3H, -CH 3 ), 3.27 (m, 2H), 3.15(m,2H),2.34(m,2H),2.19(m,2H),1.67(m 2x2H),1.64(m,2H),1.4(s,9H).HRMS(ESI)m/z,C 15 H 28 N 2 O 5 , theoretical value: 316.39, measured value: 316.40.
化合物20的合成Synthesis of Compound 20
将化合物19(0.8g,2.5mmol)溶解在5mL的乙酸乙酯中,将此反应溶液与3.2mL的盐酸(4M)水溶液混合,再加入5mL的二恶烷。在室温条件下,将此混合反应溶液持续搅拌30分钟。经过旋蒸浓缩后,得到粘稠状得粗产品20(0.5g,92%),直接用于下一步反应。Compound 19 (0.8 g, 2.5 mmol) was dissolved in 5 mL of ethyl acetate, the reaction solution was mixed with 3.2 mL of aqueous hydrochloric acid (4 M), and 5 mL of dioxane was added. The mixed reaction solution was continuously stirred for 30 minutes at room temperature. After rotary evaporation and concentration, a viscous crude product 20 (0.5 g, 92%) was obtained, which was directly used in the next reaction.
化合物21的合成Synthesis of Compound 21
将上述粗产品化合物20(0.252g,1mmol)溶解在5mL的二甲基甲酰胺中,在0℃下,将上述反应液与3-O-4,4'-二甲氧基三苯甲基-2-羟基-2-甲基丙酸16(0.45g,0.9mmol)混合,并加入2-(7-氮杂苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(0.46g,1.2mmol)和N,N-二异丙基乙胺(0.52mL),搅拌20分钟。缓慢将上述反应溶液的温度升至室温,持续搅拌14小时。反应溶液与20mL的饱和氯化钠水溶液混合,并用2×50mL的乙酸乙酯萃取,有机相经过无水硫酸钠干燥后,再经过减压旋蒸浓缩得到粗产物21。用硅胶色谱柱继续纯化,使用一个梯度淋洗,先用乙酸乙酯溶剂洗涤,然后用(乙酸乙酯/甲醇,90:10,v/v)淋洗,收集产物组分,减压抽干溶剂得到化合物21(0.38g,61%)。1H NMR(CDCl3):δ,8.01(b,1H,-CONH-),7.26(m,4H,Trityl),7.05(m,4H,Trityl),6.67(m,4H,Trityl),6.48(b,1H,-NHCO-),5.25(s,3H,-OCH3),3.78(s,6H,2x-OCH3),3.64(s,4H,2X-CH2-),3.26(m,2H,-NHCH2-),3.17(m,2H,-CH2NH-),2.79(m,3H,-OCH3),2.31(m,2H),2.18(m,2H),1.65-1.56(m,6H),1.25(s,3H).HRMS(ESI)m/z,C36H46N2O8,(M+Na+)理论值:657.34,实测值:657.40.The above crude product compound 20 (0.252 g, 1 mmol) was dissolved in 5 mL of dimethylformamide, and the above reaction solution was mixed with 3-O-4,4'-dimethoxytrityl at 0 °C. -2-Hydroxy-2-methylpropionic acid 16 (0.45 g, 0.9 mmol) was mixed, and 2-(7-azabenzotriazole)-N,N,N',N'-tetramethyl was added Urea hexafluorophosphate (0.46 g, 1.2 mmol) and N,N-diisopropylethylamine (0.52 mL) and stirred for 20 minutes. The temperature of the above reaction solution was slowly raised to room temperature, and stirring was continued for 14 hours. The reaction solution was mixed with 20 mL of saturated aqueous sodium chloride solution, and extracted with 2×50 mL of ethyl acetate. The organic phase was dried over anhydrous sodium sulfate, and then concentrated by rotary evaporation under reduced pressure to obtain crude product 21. Continue to purify with silica gel column, use a gradient elution, first wash with ethyl acetate solvent, then with (ethyl acetate/methanol, 90:10, v/v), collect product fractions, and dry under reduced pressure The solvent gave compound 21 (0.38 g, 61%). 1 H NMR (CDCl 3 ): δ, 8.01 (b, 1H, -CONH-), 7.26 (m, 4H, Trityl), 7.05 (m, 4H, Trityl), 6.67 (m, 4H, Trityl), 6.48 ( b, 1H, -NHCO-), 5.25(s, 3H, -OCH 3 ), 3.78(s, 6H, 2x-OCH 3 ), 3.64(s, 4H, 2X-CH 2 -), 3.26(m, 2H ,-NHCH 2 -), 3.17(m, 2H, -CH 2 NH-), 2.79(m, 3H, -OCH 3 ), 2.31(m, 2H), 2.18(m, 2H), 1.65-1.56(m ,6H),1.25(s,3H).HRMS(ESI)m/z,C 36 H 46 N 2 O 8 ,(M+Na + )Theoretical value: 657.34, Found value: 657.40.
化合物(603A)按照以下路线制备Compound (603A) was prepared according to the following route
化合物22的合成Synthesis of Compound 22
将纯化的化合物21(0.7g,1.1mmol)溶解在5mL的无水甲醇中,然后将1.5mL的氯化锂的甲醇溶液(2M)在0℃下缓慢加入反应溶液中。在0℃的条件下搅拌30分钟,然后将反应溶液升温至室温,继续在室温条件下搅拌2小时。在室温条件下,将反应溶液与2mL的水混合后,经过旋蒸浓缩至半干,将甲醇除去,然后用制备反相高压液相色谱进行分离,流动相溶剂是甲醇和水(MeOH:H2O,1:1,v/v)。收集产物组分,减压抽干溶剂得到黄色固体化合物22(0.66g,93%)。1H NMR(CDCl3):δ,7.38(m,4H,Trityl),7.29(b,1H,-CONH-),7.28(m,5H,Trityl),7.16(b,1H,-NHCO-),6.79(m,4H,Trityl),3.76(s,10H,2x-OCH3,2x–CH2),3.71(m,2H,-CH2-),3.21(m,2H,-NHCH2-),2.07(m,2H,-CH2NH-),1.87(m,2H),1.50(m,2H),1.27(m,2H),1.21(s,3H).HRMS(ESI)m/z,C35H43N2O8,(M+H++Na+)理论值:643.72实测值:643.20.The purified compound 21 (0.7 g, 1.1 mmol) was dissolved in 5 mL of anhydrous methanol, and then 1.5 mL of lithium chloride in methanol (2M) was slowly added to the reaction solution at 0°C. After stirring at 0°C for 30 minutes, the reaction solution was warmed to room temperature, and stirring was continued at room temperature for 2 hours. At room temperature, the reaction solution was mixed with 2 mL of water, concentrated to semi-dryness by rotary evaporation, methanol was removed, and then separated by preparative reversed-phase high pressure liquid chromatography, and the mobile phase solvent was methanol and water (MeOH:H 2 O, 1:1, v/v). The product fractions were collected, and the solvent was evaporated under reduced pressure to obtain compound 22 as a yellow solid (0.66 g, 93%). 1 H NMR (CDCl 3 ): δ, 7.38 (m, 4H, Trityl), 7.29 (b, 1H, -CONH-), 7.28 (m, 5H, Trityl), 7.16 (b, 1H, -NHCO-), 6.79(m, 4H, Trityl), 3.76(s, 10H, 2x-OCH 3, 2x-CH 2 ), 3.71(m, 2H, -CH 2 -), 3.21(m, 2H, -NHCH 2 -), 2.07(m,2H,-CH 2 NH-),1.87(m,2H),1.50(m,2H),1.27(m,2H),1.21(s,3H).HRMS(ESI)m/z,C 35 H 43 N 2 O 8 , (M+H + +Na + ) Theoretical value: 643.72 Measured value: 643.20.
化合物(603A)的合成Synthesis of Compound (603A)
将纯化的化合物22(0.65g,1.04mmol)溶解在15mL的二氯甲烷中,然后在室温下,将上述溶液与0.723mL的N,N-二异丙基乙胺(4.16mmol)混合。在0℃条件下,将此混合溶液与纯化的化合物14(1.83g,1.04mmol),2-(7-氮杂苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(0.435g,1.1mmol)和N,N-二异丙基乙胺(0.723mL,4.16mmol)混合并搅拌30分钟。继续在0℃条件,向反应溶液中加入1mL的N,N-二异丙基乙胺,并持续搅拌反应溶液1小时。将反应温度从0℃逐渐升至室温,然后继续搅拌2小时。反应溶液与5mL的饱和氯化钠水溶液混合,并用2×50mL的二氯甲烷萃取,有机相经过无水硫酸钠干燥后,再经过减压旋蒸浓缩得到粗产物603A。用硅胶色谱柱继续纯化,使用一个梯度淋洗,先用二氯甲烷溶剂洗涤,然后用(二氯甲烷/甲醇/三乙胺,94:5:1,v/v/v)淋洗,收集产物组分,减压抽干溶剂得到黄色固体化合物603A(1.56g,65%)。1H NMR(CDCl3):δ,7.38(m,3H,-NH-),7.28(m,4H,trityl),7.26(m,1H,-NH-),7.18(m,1H,-NH-),6.84(m,5H,trityl),6.37(m,4H,trityl),5.33(m,3H,sugar-H-4’),5.16(dd,J=3.4Hz,J=11.3Hz,3H,sugar-H-3’),4.77(d,J=8.4Hz,3H,sugar-H-1’),4.18-4.07(m,3x2H,3x1H,sugar-H-5’,sugar-H-6’),3.94(m,3H,sugar-H-2’),3.77-3.53(m,14H),3.42(m,2H,-NHCH2-),3.30-3.19(m,2H,-CH2NH-),2.42(m,2H),2.19(m,4H),2.15(s,9H),2.07(m,2H),2.05(s,9H,2.01(s,9H),1.96(s,9H),1.20(s,3H).HRMS(ESI)m/z,C87H143N9O44,(M-trityl+H+)/2,理论值:1010.55,实测值:1010.4.The purified compound 22 (0.65 g, 1.04 mmol) was dissolved in 15 mL of dichloromethane, then the above solution was mixed with 0.723 mL of N,N-diisopropylethylamine (4.16 mmol) at room temperature. At 0°C, this mixed solution was mixed with purified compound 14 (1.83 g, 1.04 mmol), 2-(7-azabenzotriazole)-N,N,N',N'-tetramethyl Urea hexafluorophosphate (0.435 g, 1.1 mmol) and N,N-diisopropylethylamine (0.723 mL, 4.16 mmol) were mixed and stirred for 30 minutes. Continuing at 0°C, 1 mL of N,N-diisopropylethylamine was added to the reaction solution, and the reaction solution was continuously stirred for 1 hour. The reaction temperature was gradually increased from 0°C to room temperature, and then stirring was continued for 2 hours. The reaction solution was mixed with 5 mL of saturated aqueous sodium chloride solution, and extracted with 2×50 mL of dichloromethane. The organic phase was dried over anhydrous sodium sulfate, and then concentrated by rotary evaporation under reduced pressure to obtain crude product 603A. Purification was continued with a silica gel column using a gradient elution, first with dichloromethane solvent, then with (dichloromethane/methanol/triethylamine, 94:5:1, v/v/v), and the collected The product components were dried under reduced pressure to obtain yellow solid compound 603A (1.56 g, 65%). 1 H NMR (CDCl 3 ): δ, 7.38 (m, 3H, -NH-), 7.28 (m, 4H, trityl), 7.26 (m, 1H, -NH-), 7.18 (m, 1H, -NH-) ), 6.84 (m, 5H, trityl), 6.37 (m, 4H, trityl), 5.33 (m, 3H, sugar-H-4'), 5.16 (dd, J=3.4Hz, J=11.3Hz, 3H, sugar-H-3'), 4.77(d, J=8.4Hz, 3H, sugar-H-1'), 4.18-4.07(m, 3x2H, 3x1H, sugar-H-5', sugar-H-6' ), 3.94(m, 3H, sugar-H-2'), 3.77-3.53(m, 14H), 3.42(m, 2H, -NHCH 2 -), 3.30-3.19(m, 2H, -CH 2 NH- ), 2.42(m, 2H), 2.19(m, 4H), 2.15(s, 9H), 2.07(m, 2H), 2.05(s, 9H, 2.01(s, 9H), 1.96(s, 9H), 1.20(s, 3H).HRMS(ESI) m/z, C 87 H 143 N 9 O 44 , (M-trityl+H + )/2, theoretical value: 1010.55, observed value: 1010.4.
按照以下路线制备缀合物(603B)三乙胺羧酸盐The conjugate (603B) triethylamine carboxylate was prepared according to the following route
将化合物(603A)(1.5g,0.646mmol)溶解在30mL的干燥二氯甲烷,然后加入5mL的三乙胺。将4-二甲氨基吡啶(0.159g,1.3mmol)搅拌溶解在反应溶液中,在室温下将丁二酸酐(0.13g,1.3mmol)搅拌溶解在反应溶液中,搅拌反应8小时。继续加入丁二酸酐(32mg,0.32mmol),并在室温下继续搅拌14小时。将上述反应后的溶液倒入饱和食盐水中,用2×50mL的二氯甲烷萃取,分出有机相,加无水硫酸钠干燥,减压蒸到半干。用硅胶色谱纯化,使用一个梯度淋洗,先用混合溶剂(二氯甲烷/甲醇/三乙胺,100:2;1,v/v/v)淋洗,继续用混合溶剂(二氯甲烷/甲醇/三乙胺,100:5:1,v/v/v)淋洗,最后用混合溶剂(二氯甲烷/甲醇/三乙胺,100:5:1,v/v/v)淋洗出终产物,减压抽干溶剂得到一个白色的化合物(603B)(1.56g,65%)。1H NMR(CDCl3)δ,1H NMR(CDCl3):δ,7.39(m,3H,-NH-),7.28(m,5H,trityl),7.22(m,1H,-NH-),7.10(m,1H,-NH-),6.80(m,4H,trityl),6.37(m,4H,trityl),5.32(m,3H,sugar-H-4’),5.29(s,2H),5.15(dd,J=3.4Hz,J=11.3Hz,3H,sugar-H-3’),4.77(d,J=8.4Hz,3H,sugar-H-1’),4.18-4.07(m,3x2H,3x1H,sugar-H-5’,sugar-H-6’),3.94(m,3H,sugar-H-2’),3.67(m,9H),3.61-3.53(m,42H),3.42(m,2H,-NHCH2-),3.30-3.19(m,2H,-CH2NH-),2.42(m,2H),2.19(m,4H),2.15(s,9H),2.07(m,2H),2.05(s,9H,2.01(s,9H),1.96(s,9H),1.23(s,3H).HRMS(ESI)m/z,C112H165N9O49,(M-H+)/2,理论值:1209.27实测值:1209.83。Compound (603A) (1.5 g, 0.646 mmol) was dissolved in 30 mL of dry dichloromethane, and then 5 mL of triethylamine was added. 4-Dimethylaminopyridine (0.159 g, 1.3 mmol) was stirred and dissolved in the reaction solution, and succinic anhydride (0.13 g, 1.3 mmol) was stirred and dissolved in the reaction solution at room temperature, and the reaction was stirred for 8 hours. Succinic anhydride (32 mg, 0.32 mmol) was continued to be added and stirring was continued for 14 hours at room temperature. The above-reacted solution was poured into saturated brine, extracted with 2×50 mL of dichloromethane, the organic phase was separated, dried over anhydrous sodium sulfate, and evaporated to semi-dryness under reduced pressure. Purified by silica gel chromatography, using a gradient elution, first with mixed solvent (dichloromethane/methanol/triethylamine, 100:2; 1, v/v/v), followed by mixed solvent (dichloromethane/ Methanol/triethylamine, 100:5:1, v/v/v) rinse, and finally with mixed solvent (dichloromethane/methanol/triethylamine, 100:5:1, v/v/v) rinse The final product was obtained, and the solvent was evaporated under reduced pressure to obtain a white compound (603B) (1.56 g, 65%). 1 H NMR(CDCl 3 )δ, 1 H NMR(CDCl 3 ):δ, 7.39(m,3H,-NH-),7.28(m,5H,trityl),7.22(m,1H,-NH-), 7.10(m,1H,-NH-),6.80(m,4H,trityl),6.37(m,4H,trityl),5.32(m,3H,sugar-H-4'),5.29(s,2H), 5.15(dd,J=3.4Hz,J=11.3Hz,3H,sugar-H-3'),4.77(d,J=8.4Hz,3H,sugar-H-1'),4.18-4.07(m,3x2H ,3x1H,sugar-H-5',sugar-H-6'),3.94(m,3H,sugar-H-2'),3.67(m,9H),3.61-3.53(m,42H),3.42( m, 2H, -NHCH 2 -), 3.30-3.19(m, 2H, -CH 2 NH-), 2.42(m, 2H), 2.19(m, 4H), 2.15(s, 9H), 2.07(m, 2H), 2.05(s, 9H, 2.01(s, 9H), 1.96(s, 9H), 1.23(s, 3H).HRMS(ESI) m/z, C 112 H 165 N 9 O 49 , (MH + )/2, theoretical value: 1209.27 Measured value: 1209.83.
按照以下工艺路线通过将(603B)缀合分子连接至固相载体,制备(603C)缀合分子的固相载体The solid phase support of the (603C) conjugated molecule was prepared by attaching the (603B) conjugated molecule to the solid support according to the following procedure
将缀合物半丁二酸酯(603B)(50mg,0.021mmol)和2-(7-氮杂苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸盐(10mg,0.026mmol)在室温下溶解于1.25mL的无水乙腈。将N,N-二异丙基乙胺(10μL)加入反应溶液中,待所有试剂溶解后,将125mg的长链胺基烷烃玻璃沙(500°A,native lcaa-CPG,厂商Chemgenes,USA)加入到上述反应溶液中。在室温下,将固、液两相旋转搅拌300转/分钟。反应持续2小时后,将残留液滤出,用乙腈洗涤长链胺基烷烃玻璃沙固相载体三次(3×1mL)。将0.5mL的盖帽试剂A(乙酸酐)的四氢呋喃溶液,浓度为(10%,v/v)和0.5mL的盖帽试剂B(N-甲基咪唑在吡啶和乙腈的混合溶剂,浓度为(15:10:75,v/v/v))与长链胺基烷烃玻璃沙在室温下旋转搅拌1小时。过滤出反应液,将长链胺基烷烃玻璃沙固相载体用乙腈淋洗3次,用真空油泵使长链胺基烷烃玻璃沙固相载体在减压下干燥2小时。得到玻璃沙固相载体(603C,130mg)。称量长链胺基烷烃玻璃沙603C固相载体(8.3mg),加入到100mL的3%的三氯乙酸的二氯甲烷溶液中,旋转搅拌30秒,静置1分钟。取上清液在498nm处测量可见光吸收,其光吸收度为0.309,计算出缀合物603C的载量(也即(603B)在CPG上的载量)为53.25μmol/g。The conjugate hemisuccinate (603B) (50 mg, 0.021 mmol) and 2-(7-azabenzotriazole)-N,N,N',N'-tetramethylurea hexafluorophosphate The salt (10 mg, 0.026 mmol) was dissolved in 1.25 mL of anhydrous acetonitrile at room temperature. N,N-diisopropylethylamine (10 μL) was added to the reaction solution. After all the reagents were dissolved, 125 mg of long-chain aminoalkane glass sand (500°A, native lcaa-CPG, manufacturer Chemgenes, USA) was added. added to the above reaction solution. At room temperature, the solid and liquid phases were rotated and stirred at 300 rpm. After the reaction continued for 2 hours, the residue was filtered off, and the long-chain aminoalkane glass sand solid support was washed three times with acetonitrile (3×1 mL). Mix 0.5 mL of capping reagent A (acetic anhydride) in tetrahydrofuran with a concentration of (10%, v/v) and 0.5 mL of capping reagent B (N-methylimidazole in a mixed solvent of pyridine and acetonitrile with a concentration of (15%) : 10:75, v/v/v)) with long-chain aminoalkane glass sand for 1 hour at room temperature with rotary stirring. The reaction solution was filtered off, the long-chain aminoalkane glass sand solid phase carrier was rinsed three times with acetonitrile, and the long-chain aminoalkane glass sand solid phase carrier was dried under reduced pressure for 2 hours with a vacuum oil pump. A glass sand solid phase carrier (603C, 130 mg) was obtained. Weigh the long-chain aminoalkane glass sand 603C solid phase carrier (8.3 mg), add it to 100 mL of a 3% trichloroacetic acid solution in dichloromethane, rotate and stir for 30 seconds, and let stand for 1 minute. The visible light absorption was measured at 498 nm from the supernatant, and the absorbance was 0.309. The calculated loading of the conjugate 603C (that is, the loading of (603B) on CPG) was 53.25 μmol/g.
TTR siRNA正义和反义序列的制备(siRNA缀合物的制备)Preparation of TTR siRNA Sense and Antisense Sequences (Preparation of siRNA Conjugates)
本发明中的小干扰RNA选自双链寡核苷酸,其中包含一个正义链和一个反义链,正义和反义链为互补,即在双链核酸分子中,一条链的碱基与另一条链上的碱基以氢键相互作用形成互补方式配对。在双股螺旋的寡核苷酸中,嘌呤碱基腺嘌呤(A)与嘧啶碱基胸腺嘧啶(T)或尿嘧啶(U)相配对;嘌呤碱基鸟嘌呤(G)始终与嘧啶碱基胞嘧啶(C)相配对。两条互补链的序列为从5’-到3’-,另一为从3’-到5’-排序走向。小干扰RNA中的每个核苷酸各自独立地为修饰或未修饰的核苷酸,修饰是指2’-的羟基被其他基团取代。核苷酸2’-位置的修饰可选自2’-甲氧基、2’-氟、2’-甲氧乙基、2’-2,4-二硝基苯酚、2’-胺基、2’-4’-环锁乙基等基团。序列中每个核苷之间是由磷酸二酯键链接,其中磷酸二酯键中的一个氧原子被硫原子取代可形成硫代磷酸二酯键。正义链和一个反义链序列长度通常由19(或21)个核苷酸组成,并以互补方式形成双股配对。正义链核苷序列为靶mRNA中的一段核苷酸。反义链中通常连有连续的2个脱氧胸腺嘧啶核苷酸或连续的2个尿嘧啶核苷酸。靶mRNA通常指细胞中蛋白异常表达的基因中的mRNA。The small interfering RNAs in the present invention are selected from double-stranded oligonucleotides, which include a sense strand and an antisense strand, and the sense and antisense strands are complementary, that is, in a double-stranded nucleic acid molecule, the bases of one strand and the other Bases on one strand pair in a complementary fashion through hydrogen bonding interactions. In double-stranded oligonucleotides, the purine base adenine (A) is paired with the pyrimidine bases thymine (T) or uracil (U); the purine base guanine (G) is always paired with a pyrimidine base Cytosine (C) is paired. The sequence of the two complementary strands is from 5'- to 3'-, and the other is from 3'- to 5'-ordered. Each nucleotide in the small interfering RNA is independently a modified or unmodified nucleotide, and modification means that the 2'-hydroxyl group is replaced by other groups. The modification at the 2'-position of the nucleotide can be selected from 2'-methoxy, 2'-fluoro, 2'-methoxyethyl, 2'-2,4-dinitrophenol, 2'-amino, 2'-4'-ring-locked ethyl and other groups. Each nucleoside in the sequence is linked by a phosphodiester bond, in which an oxygen atom in the phosphodiester bond is replaced by a sulfur atom to form a phosphorothioate bond. The sense strand and one antisense strand usually consist of 19 (or 21) nucleotides in length and form a double-stranded pair in a complementary manner. The sense strand nucleoside sequence is a stretch of nucleotides in the target mRNA. The antisense strand is usually linked with two consecutive deoxythymidine nucleotides or two consecutive uracil nucleotides. Target mRNAs generally refer to mRNAs in genes whose proteins are abnormally expressed in cells.
功能性寡核苷酸缀合物的制备,可以按照图1所示的流程制备:The preparation of functional oligonucleotide conjugates can be prepared according to the process shown in Figure 1:
按照亚磷酰胺固相合成的方法,根据上述序列顺序按照从3'-5'的方向逐一连接核苷单体。每连接一个核苷单体都包括脱保护、偶联、盖帽、和氧化四步反应。According to the method of phosphoramidite solid-phase synthesis, the nucleoside monomers are connected one by one in the direction from 3' to 5' according to the above sequence sequence. Each linking of a nucleoside monomer includes four steps of deprotection, coupling, capping, and oxidation.
固相合成试剂配制: Preparation of solid-phase synthesis reagents :
脱保护试剂为三氯乙酸或二氯乙酸的二氯甲烷溶液(3%,v/v).核苷单体溶解在无水乙腈,浓度为(0.05M-0.1M),适量加入少量分子筛3A°做无水处理。耦联活化剂为5-乙基硫基1H-四氮唑(5-Ethylthio-1H-Tetrazole)的无水乙腈,浓度为(0.25M,或0.45M),活化剂也可选1H-四氮唑(Tetrazole);5-苄硫基四氮唑(5-Benzylthio-1H-Tetrazole);4,5-二氰基咪唑(4,5-Dicyanoimidazole)。盖帽试剂A为乙酸酐的四氢呋喃溶液,浓度为(10%,v/v)。盖帽试剂B为N-甲基咪唑在吡啶和乙腈的混合溶剂,浓度为(15:10:75,v/v/v)。氧化试剂为碘的水和吡啶溶液(0.05M,95wt%的吡啶水溶液)。硫化试剂为N-Dimethylaminomethylidene)amino]-3H-1,2,4-dithiazoline-3-thione((二甲基氨基-亚甲基)氨基-3H-1-2,4-噻唑-3-硫酮),浓度为(0.05M,吡啶/乙腈,2:3,v/v)。切割脱保护试剂为28wt%浓氨水。The deprotection reagent is trichloroacetic acid or dichloroacetic acid in dichloromethane solution (3%, v/v). The nucleoside monomer is dissolved in anhydrous acetonitrile, the concentration is (0.05M-0.1M), an appropriate amount of molecular sieve 3A is added °Do anhydrous treatment. The coupling activator is anhydrous acetonitrile of 5-Ethylthio-1H-Tetrazole (5-Ethylthio-1H-Tetrazole), the concentration is (0.25M, or 0.45M), and the activator can also be 1H-tetrazolium 5-Benzylthio-1H-Tetrazole; 4,5-Dicyanoimidazole. The capping reagent A is a solution of acetic anhydride in tetrahydrofuran with a concentration of (10%, v/v). The capping reagent B is a mixed solvent of N-methylimidazole in pyridine and acetonitrile with a concentration of (15:10:75, v/v/v). The oxidizing reagent was iodine in water and pyridine (0.05M, 95 wt% pyridine in water). The sulfurizing reagent is N-Dimethylaminomethylidene)amino]-3H-1,2,4-dithiazoline-3-thione((dimethylamino-methylene)amino-3H-1-2,4-thiazole-3-thione ) at a concentration of (0.05M, pyridine/acetonitrile, 2:3, v/v). The cleavage and deprotection reagent is 28wt% concentrated ammonia water.
其中,核苷酸固相合成的固相载体为市售的通用固相载体(HLUnyLinkerTM 300,或500°A,native lcaa-CPG,厂商Chemgenes,USA)。Wherein, the solid-phase carrier for nucleotide solid-phase synthesis is a commercially available general-purpose solid-phase carrier ( HLUnyLinker ™ 300, or 500°A, native lcaa-CPG, manufacturer Chemgenes, USA).
固相合成的步骤: Steps of solid phase synthesis :
在合成仪上固相载体或与载体相联的核苷单体上的4,4'-二甲氧基三苯甲基保护基与三氯乙酸的二氯甲烷的溶液(3%,v/v),摩尔比为(1:30)。室温固相反应1.5分钟,反复操作三次,待固相载体的洗脱液颜色由红色变成无色停止滴加脱保护液。经过用无水乙腈反复洗涤后,加入核苷单体和活化剂(耦联活化剂,5-乙硫基四氮唑)(核苷单体和活化剂的比例(摩尔比为1:20),固相载体和核苷单体的摩尔比为1:(5-6)。室温试剂和固相反应时间为3-4分钟为一个循环,两个循环后,停止反应。用无水乙腈洗涤后,加入氧化试剂溶液,固相载体和氧化剂的摩尔比为1:6。室温下氧化试剂与固相载体反应时间约为2分钟,重复操作两次。在耦合反应之后,如需硫化反应步骤,加入硫化试剂溶液,固相载体和硫化剂的摩尔比为1:6。室温下氧化试剂与固相载体反应时间约为4-5分钟,重复操作两次。盖帽保护反应,加入盖帽反应试剂,固相载体和盖帽试剂的摩尔比为1:80。室温下盖帽试剂与固相载体反应时间大约为1-2分钟,重复操作两次。循环上述脱保护、耦合、氧化、盖帽步骤,直到完成最后一个核苷酸的耦合。将在由载有核酸序列正义链或反义链的固相载体转移至小玻璃瓶中,加入28%氨水溶液,并将玻璃盖旋紧密封,在55℃的温度下,将正义链或反义链中的碱基保护基水解脱掉,同时将正义链或反义链与固相载体水解分离。反应持续16个小时。将所得到的小核酸序列链溶液与固相载体过滤分离。经过浓缩后,得到小核酸序列链的粗产物。A solution of the 4,4'-dimethoxytrityl protecting group on the solid-phase support or the nucleoside monomer linked to the support and trichloroacetic acid in dichloromethane (3%, v/ v), the molar ratio is (1:30). The solid-phase reaction was performed at room temperature for 1.5 minutes, and the operation was repeated three times. When the color of the eluent of the solid-phase carrier changed from red to colorless, stop adding the deprotection solution dropwise. After repeated washing with anhydrous acetonitrile, add nucleoside monomer and activator (coupling activator, 5-ethylthiotetrazolium) (the ratio of nucleoside monomer and activator (molar ratio is 1:20) , the molar ratio of solid phase carrier and nucleoside monomer is 1:(5-6). The reaction time of room temperature reagent and solid phase is 3-4 minutes for one cycle, after two cycles, the reaction is stopped. Wash with anhydrous acetonitrile Then, add the oxidizing reagent solution, and the molar ratio of the solid phase carrier and the oxidizing agent is 1:6. The reaction time of the oxidizing reagent and the solid phase carrier at room temperature is about 2 minutes, and the operation is repeated twice. After the coupling reaction, if the vulcanization reaction step is required , add sulfidation reagent solution, the molar ratio of solid phase carrier and sulfidation agent is 1:6. The reaction time of oxidizing reagent and solid phase carrier at room temperature is about 4-5 minutes, repeat the operation twice. Cap protection reaction, add cap reaction reagent , the molar ratio of the solid phase carrier and the capping reagent is 1:80. The reaction time of the capping reagent and the solid phase carrier at room temperature is about 1-2 minutes, and the operation is repeated twice. The above steps of deprotection, coupling, oxidation, and capping are cycled until To complete the coupling of the last nucleotide. Transfer the solid phase carrier carrying the sense or antisense strand of the nucleic acid sequence to a small glass vial, add 28% aqueous ammonia solution, and tightly seal the glass cover at 55°C Under the temperature of , the base protecting group in the sense strand or antisense strand is hydrolyzed off, and the sense strand or antisense strand is hydrolyzed and separated from the solid phase carrier at the same time. The reaction lasted for 16 hours. The obtained small nucleic acid sequence chain was separated by hydrolysis. The solution is separated from the solid phase carrier by filtration. After concentration, the crude product of the small nucleic acid sequence chain is obtained.
用制备高压液相色谱纯化分离和脱盐Purification separation and desalting by preparative high pressure liquid chromatography
使用制备型阴离子交换色谱柱(Source 15Q),通过NaBr的梯度洗脱纯化小核酸。流动相A:20mM磷酸钠(pH 8.0),流动相B:20mM磷酸钠(pH 8.0),1M溴化钠在10%乙腈的水溶液。柱温是65℃。流速为10mL/min。淋洗梯度是起始为流动相A,随后流动相B从0%在12分钟增至20%。之后的15分钟,将流动相B从20%增至到50%。收集产品洗脱液,并进行组分分析和组分合并。采用反相色谱纯化柱进行脱盐,或透析脱盐。经过浓缩和冷冻干燥,得到纯化的小核苷酸。对于上述合成的正义链和反义链,使用阴离子交换液相色谱(AEX-HPLC)检测纯度,并以反相液质联用色谱(LC-MS)鉴定分析全序列分子量,分子量的实测值与理论值相符,确认所合成的核酸序列。Small nucleic acids were purified by gradient elution of NaBr using a preparative anion exchange chromatography column (Source 15Q). Mobile phase A: 20 mM sodium phosphate (pH 8.0), mobile phase B: 20 mM sodium phosphate (pH 8.0), 1 M sodium bromide in 10% acetonitrile in water. The column temperature was 65°C. The flow rate was 10 mL/min. The elution gradient was started with mobile phase A followed by an increase in mobile phase B from 0% to 20% in 12 minutes. After 15 minutes, increase mobile phase B from 20% to 50%. The product eluates were collected and subjected to fractional analysis and fractional pooling. Desalting is carried out using reversed-phase chromatographic purification columns, or dialysis desalting. After concentration and lyophilization, purified small nucleotides were obtained. For the above-synthesized sense and antisense strands, anion exchange liquid chromatography (AEX-HPLC) was used to detect the purity, and reversed-phase liquid chromatography-mass spectrometry (LC-MS) was used to identify and analyze the molecular weight of the whole sequence. The theoretical values are in agreement, confirming the synthesized nucleic acid sequence.
退火annealing
将所合成的正义链(S链)与反义链(AS链)以等摩尔比混合在注射用生理盐水中,在90℃温度下加热5分钟,随后缓慢至冷却至室温,保存在4℃冰箱中12小时,使其通过氢键形成双链结构,即可得到siRNA缀合物(SNK-17的序列和SNK-18的序列)。The synthesized sense strand (S strand) and antisense strand (AS strand) were mixed in an equimolar ratio in physiological saline for injection, heated at 90°C for 5 minutes, then slowly cooled to room temperature, and stored at 4°C The siRNA conjugates (sequences of SNK-17 and SNK-18) can be obtained by placing them in a refrigerator for 12 hours to form a double-stranded structure through hydrogen bonds.
靶向鼠TTR siRNA为编号为SNK-17的序列:The siRNA targeting murine TTR is the sequence numbered SNK-17:
正义链(S):Chain of Justice (S):
5’-AfsmAsCfmAGfmUGfmUUfCfUfmUGfmCUfmCUfmAUfmAAf-EgGaGaGaC3(碱基序列如SQE ID NO:1所示)5'-AfsmAsCfmAGfmUGfmUUfCfUfmUGfmCUfmCUfmAUfmAAf-EgGaGaGaC3 (base sequence shown in SQE ID NO: 1)
反义链(AS):Antisense Strand (AS):
5’-mUsUfsmAUfmAGfmAGfmCAfmAmGmAAfmCAfmCUfmGUfmUsmUsmU(碱基序列如SQEID NO:2所示)5'-mUsUfsmAUfmAGfmAGfmCAfmAmGmAAfmCAfmCUfmGUfmUsmUsmU (base sequence shown in SQEID NO: 2)
靶向鼠TTR siRNA为编号为SNK-18的序列:The siRNA targeting murine TTR is the sequence numbered SNK-18:
正义链(S):Chain of Justice (S):
5’-AfsmAsCfmAGfmUGfmUUfCfUfmUGfmCUfmCUfmAUfmAAf-TriGalNac(碱基序列如SQE ID NO:1所示)5'-AfsmAsCfmAGfmUGfmUUfCfUfmUGfmCUfmCUfmAUfmAAf-TriGalNac (base sequence shown in SQE ID NO: 1)
反义链(AS):Antisense Strand (AS):
5’-mUsUfsmAUfmAGfmAGfmCAfmAmGmAAfmCAfmCUfmGUfmUsmUsmU(碱基序列如SQEID NO:2所示)5'-mUsUfsmAUfmAGfmAGfmCAfmAmGmAAfmCAfmCUfmGUfmUsmUsmU (base sequence shown in SQEID NO: 2)
S:正义链;AS:反义链S: sense strand; AS: antisense strand
其中,大写字母C、G、U、A表示核苷酸的碱基组成;小写字母m表示该字母m右侧相邻的一个核苷酸为2'-甲氧基修饰的核苷酸(即核苷酸的戊糖2’-OH被甲氧基取代);小写字母f表示该字母f左侧相邻的一个核苷酸为2'-氟修饰的核苷酸(即核苷酸的戊糖2’-OH被氟取代);小写字母s表示与该字母s左右相邻的两个核苷酸之间为硫代磷酸二酯键连接(即磷酸二酯键中的非桥氧原子被硫原子取代);左右相邻的两个核苷酸之间没有其他字母均表示为磷酸二酯键连接。TriGalNac表示式(603)中除Nu之外的部分,Eg为乙二醇,三个Ga表示单一N-乙酰半乳糖胺(式(101))制备(通过固相合成的方式)得到的(606),C3为1,3-丙二醇。Among them, capital letters C, G, U, A represent the base composition of nucleotides; lowercase letter m represents that the adjacent nucleotide to the right of the letter m is a 2'-methoxy-modified nucleotide (ie The pentose sugar 2'-OH of the nucleotide is replaced by a methoxy group); the lowercase letter f indicates that the adjacent nucleotide to the left of the letter f is a 2'-fluorine modified nucleotide (that is, the pentane of the nucleotide is The sugar 2'-OH is replaced by fluorine); the lowercase letter s indicates that the two nucleotides adjacent to the letter s are connected by a phosphorothioate bond (that is, the non-bridging oxygen atom in the phosphodiester bond is Sulfur atom substitution); there are no other letters between two nucleotides adjacent to the left and right are indicated as phosphodiester linkages. TriGalNac represents the moiety other than Nu in formula (603), Eg is ethylene glycol, and three Ga represent a single N-acetylgalactosamine (formula (101)) (606) prepared by solid-phase synthesis ), C3 is 1,3-propanediol.
液质分析数据确认,SNK-17的序列中正义链(S),HRMS(ESI)m/z理论值为:8704.23;实测值为:8704.0;SNK-17的序列中反义链(A),HRMS(ESI)m/z理论值为:7595.43,实测值为:7595.0。SNK-18的序列中正义链(S),HRMS(ESI)m/z理论值为:8503.94;实测值为:8503.1;SNK-18的序列中反义链(A),HRMS(ESI)m/z理论值为:7595.43,实测值为:7595.0。The liquid mass analysis data confirmed that the sense strand (S) in the sequence of SNK-17, the theoretical value of HRMS (ESI) m/z: 8704.23; the measured value: 8704.0; HRMS(ESI) m/z theoretical value: 7595.43, measured value: 7595.0. Sense strand (S) in the sequence of SNK-18, HRMS (ESI) m/z theoretical value: 8503.94; Measured value: 8503.1; antisense strand (A) in the sequence of SNK-18, HRMS (ESI) m/z The theoretical value of z is: 7595.43, and the measured value is: 7595.0.
活性测试(靶向鼠TTR的生物活性测试)Activity test (bioactivity test targeting murine TTR)
雌性C57BL/6小鼠(4-6周年龄)按照体重随机分组,在第0天注射5mg/kg上述得到的siRNA缀合物(SNK-17),在第21天杀死小鼠后取肝脏组织,根据RNAeasy Mini试剂盒(QIAGEN,货号74104)的操作指示提取RNA。对照组采用注射无药物的生理盐水的方式进行。根据High Capacity cDNA Reverse Transcription Kits(Thermo Fisher,货号:4368814)的建议做RT-PCR,每个反应内含1微克RNA。用实时荧光PCR法测基因表达定量,鼠TTR的TaqMan探针为Mm00443267_m1,内参基因(鼠HPRT)的探针为Mm03024075_m1(Thermo FisherScientific,Waltham,MA,USA)。PCR条件为95℃20秒1个循环,95℃1秒和60℃20秒40个循环,实时荧光PCR仪为StepOne Plus(Thermo Fisher)。TTR基因表达是以2^-ΔΔCt计算,鼠HPRT基因表达作为内参。TTR基因表达量以和对照组小鼠肝TTR基因表达为对照(见图2)。Female C57BL/6 mice (4-6 weeks old) were randomly divided into groups by body weight, injected with 5 mg/kg of the siRNA conjugate (SNK-17) obtained above on
雌性C57BL/6小鼠(4-6周年龄)按照体重随机分组,在第0,2,4天注射5mg/kgsiRNA(SNK-18),在第21天杀死小鼠后取肝脏组织,根据RNAeasy Mini试剂盒(QIAGEN,货号74104)的操作指示提取RNA。对照组采用注射无药物的生理盐水的方式进行。根据HighCapacity cDNA Reverse Transcription Kits(Thermo Fisher,货号:4368814)的建议做RT-PCR,每个反应内含1微克RNA。用实时荧光PCR法测基因表达定量,鼠TTR的TaqMan探针为Mm00443267_m1,内参基因(鼠HPRT)的探针为Mm03024075_m1(Thermo Fisher Scientific,Waltham,MA,USA)。PCR条件为95℃20秒1个循环,95℃1秒和60℃20秒40个循环,实时荧光PCR仪为StepOne Plus(Thermo Fisher)。TTR基因表达是以2^-ΔΔCt计算,鼠HPRT基因表达作为内参。TTR基因表达量以和对照组小鼠肝TTR基因表达为对照(见图3)。Female C57BL/6 mice (4-6 weeks old) were randomly divided into groups according to body weight, injected with 5 mg/kg siRNA (SNK-18) on
从图2和图3可以看出,本发明的缀合物具有定向递送小核酸的性能,在体内的稳定性强。进一步的实验显示,本发明提供的双链寡核苷酸或寡核苷酸缀合物在体内具有更高的稳定性、更低的毒性和/或更高的肝脏TTR mRNA表达的抑制活性。It can be seen from Fig. 2 and Fig. 3 that the conjugate of the present invention has the performance of directional delivery of small nucleic acid, and has strong in vivo stability. Further experiments show that the double-stranded oligonucleotides or oligonucleotide conjugates provided by the present invention have higher stability, lower toxicity and/or higher inhibitory activity of liver TTR mRNA expression in vivo.
采用正义链碱基序列为5’-CUAGGAGGCUGUAGGCAUAAA-3’(SEQ ID NO:3)且反义链碱基序列为5’-UUUAUGCCUACAGCCUCCUAG-3’(SEQ ID NO:4)的siRNA-100作为活性药物Nu能够获得更优的抑制乙肝病毒的复制的效果。进一步地,按照如下方式对siRNA-100进行修饰使得修饰后的siRNA具有更稳定的核酸结构、更高特异性和亲和力的碱基配对;且具有以下修饰的siRNA表现出更为优异的体内抑制效果,能够进一步降低本发明的siRNA在体内的免疫原性(详见发明名称为“靶向乙肝病毒的核酸及其用途”的说明书):The siRNA-100 with the base sequence of the sense strand being 5'-CUAGGAGGCUGUAGGCAUAAA-3' (SEQ ID NO: 3) and the base sequence of the antisense strand being 5'-UUUAUGCCUACAGCCUCCUAG-3' (SEQ ID NO: 4) was used as the active drug Nu can obtain better effect of inhibiting the replication of hepatitis B virus. Further, siRNA-100 was modified in the following manner so that the modified siRNA had a more stable nucleic acid structure, higher specificity and affinity base pairing; and the siRNA with the following modifications showed more excellent in vivo inhibitory effect , can further reduce the immunogenicity of the siRNA of the present invention in vivo (see the description of the invention titled "Nucleic acid targeting hepatitis B virus and its use"):
5’-CsUsAGGAGfGCfUGfUAGGCAUAAA-3’5'- C s U s AGGA Gf G Cf U Gf UAGGCAUAAA -3'
5’-UsUfsUAfUGfCCUACAGCfCUfCCUAGsUsU-3’5'- U sUfs U Af U Gf CCUACAG Cf C Uf CCUAG s U s U -3'
其中,小写字母f表示该字母f左侧相邻的一个核苷酸为2’-氟修饰的核苷酸(即核苷酸的戊糖的2’-OH被氟取代);小写字母s表示与该字母s左右相邻的两个核苷酸之间通过硫代磷酸二酯键连接(即磷酸二酯键中的非桥氧原子被硫原子取代);下划线标记的核苷酸代表该核苷酸的2’羟基被甲氧基取代。Among them, the lowercase letter f indicates that a nucleotide adjacent to the left of the letter f is a 2'-fluorine modified nucleotide (that is, the 2'-OH of the pentose sugar of the nucleotide is replaced by fluorine); the lowercase letter s indicates that The two nucleotides adjacent to the letter s are connected by a phosphorothioate bond (that is, the non-bridging oxygen atom in the phosphodiester bond is replaced by a sulfur atom); the underlined nucleotide represents the nucleus The 2' hydroxyl group of the glucoside is replaced by a methoxy group.
以上详细描述了本发明的优选实施方式,但是,本发明并不限于此。在本发明的技术构思范围内,可以对本发明的技术方案进行多种简单变型,包括各个技术特征以任何其它的合适方式进行组合,这些简单变型和组合同样应当视为本发明所公开的内容,均属于本发明的保护范围。The preferred embodiments of the present invention have been described above in detail, however, the present invention is not limited thereto. Within the scope of the technical concept of the present invention, a variety of simple modifications can be made to the technical solutions of the present invention, including combining various technical features in any other suitable manner. These simple modifications and combinations should also be regarded as the content disclosed in the present invention. All belong to the protection scope of the present invention.
SEQUENCE LISTINGSEQUENCE LISTING
<110> 施能康生物科技有限公司(Synerk Biotech Limited)<110> Synerk Biotech Limited
<120> 化合物、缀合物及其用途<120> Compounds, conjugates and uses thereof
<130> I66088SNKB-CJ<130> I66088SNKB-CJ
<150> 202110049158.8<150> 202110049158.8
<151> 2021-01-14<151> 2021-01-14
<160> 4<160> 4
<170> PatentIn version 3.5<170> PatentIn version 3.5
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<211> 21<211> 21
<212> RNA<212> RNA
<213> Artificial Sequence<213> Artificial Sequence
<220><220>
<223> The sequence is synthesized<223> The sequence is synthesized
<400> 1<400> 1
aacaguguuc uugcucuaua a 21aacaguguuc uugcucuaua a 21
<210> 2<210> 2
<211> 23<211> 23
<212> RNA<212> RNA
<213> Artificial Sequence<213> Artificial Sequence
<220><220>
<223> The sequence is synthesized<223> The sequence is synthesized
<400> 2<400> 2
uuauagagca agaacacugu uuu 23uuauagagca agaacacugu uuu 23
<210> 3<210> 3
<211> 21<211> 21
<212> RNA<212> RNA
<213> Artificial Sequence<213> Artificial Sequence
<220><220>
<223> The sequence is synthesized<223> The sequence is synthesized
<400> 3<400> 3
cuaggaggcu guaggcauaa a 21cuaggaggcu guaggcauaa a 21
<210> 4<210> 4
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<212> RNA<212> RNA
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<220><220>
<223> The sequence is synthesized<223> The sequence is synthesized
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uuuaugccua cagccuccua g 21uuuaugccua cagccuccua g 21
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