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CN114591976A - Gene for encoding GA2 ox-oxidase and application thereof in judging dwarf mango variety - Google Patents

Gene for encoding GA2 ox-oxidase and application thereof in judging dwarf mango variety Download PDF

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CN114591976A
CN114591976A CN202210361231.XA CN202210361231A CN114591976A CN 114591976 A CN114591976 A CN 114591976A CN 202210361231 A CN202210361231 A CN 202210361231A CN 114591976 A CN114591976 A CN 114591976A
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oxidase
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张宇
赵志常
黄国弟
张继
荣涛
郑剑
欧克纬
莫永龙
赵英
唐玉娟
郭丽梅
覃昱茗
庞新华
郝晓铃
韦绍龙
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Guangxi Subtropical Crops Research Institute
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Abstract

The invention belongs to the technical field of genetic engineering, and particularly relates to a gene for encoding GA2 ox-oxidase and application thereof in judging a mango dwarfing variety. A gene for encoding GA2 ox-oxidase, wherein the nucleotide sequence of the gene is shown as SEQ ID No. 1. The GA2 ox-oxidase gene can provide support for early prejudging whether the test material has dwarfing characteristics.

Description

一种编码GA2ox-氧化酶的基因及其在判断芒果矮化品种中的 应用A gene encoding GA2ox-oxidase and its application in judging mango dwarf varieties

技术领域technical field

本发明属于基因工程技术领域,具体涉及一种编码GA2ox-氧化酶的基因及其在判断芒果矮化品种中的应用。The invention belongs to the technical field of genetic engineering, and in particular relates to a gene encoding GA2ox-oxidase and its application in judging dwarf mango varieties.

背景技术Background technique

矮化种植是农作物生产不变的发展趋势。植物矮化主要分为遗传性矮化和生理性矮化。单一基因突变属于遗传性矮化,其矮化激励多为基因合成蛋白,蛋白影响激素,激素影响表型;手环境因素影响,导致植株表型发生变化,属于生理性矮化,其矮化作用机理多为环境变化影响植物激素分泌,最终导致变化。但不论哪种矮化模式,都要通过激素来影响表型,植株生长过程中的激素多与赤霉素有关。Dwarf planting is a constant development trend of crop production. Plant dwarfing is mainly divided into genetic dwarfing and physiological dwarfing. A single gene mutation belongs to hereditary dwarfing, and its dwarfing incentive is mostly gene synthesis protein, protein affects hormones, and hormones affect phenotype; hand environmental factors lead to changes in plant phenotype, which belongs to physiological dwarfing, and its dwarfing effect The mechanism is mostly that environmental changes affect the secretion of plant hormones, which eventually lead to changes. However, no matter which dwarfing mode, the phenotype must be affected by hormones, and the hormones in the process of plant growth are mostly related to gibberellin.

植物中参与赤霉素合成分解的酶较多,GA2ox(赤霉素2β氧化酶)就是其中之一,其是一种抑制活性赤霉素合成的酶,可以降低活性赤霉素含量,从而达到调节植物株高的目的。GA2ox调节GA代谢途径已在拟南芥中得到证实。There are many enzymes involved in the synthesis and decomposition of gibberellin in plants, and GA2ox (gibberellin 2β oxidase) is one of them. It is an enzyme that inhibits the synthesis of active gibberellin, which can reduce the content of active gibberellin, so as to achieve The purpose of regulating plant height. The regulation of GA metabolic pathways by GA2ox has been demonstrated in Arabidopsis.

通过对比具有乔化特性和矮化特性植物材料GA2ox基因的表达量,可以预判植物其是否具有矮化特性,既省时又省力。By comparing the expression levels of GA2ox genes in plant materials with arborization characteristics and dwarf characteristics, it is possible to predict whether plants have dwarf characteristics, which saves time and effort.

发明内容SUMMARY OF THE INVENTION

为了克服上述技术的不足,本发明提供了一种编码GA2ox-氧化酶的基因及其在判断芒果矮化品种中的应用,其可以预判芒果品种是否具有矮化特。In order to overcome the deficiencies of the above technologies, the present invention provides a gene encoding GA2ox-oxidase and its application in judging mango dwarf varieties, which can predict whether mango varieties have dwarf characteristics.

为实现上述目的,本发明提供了如下技术方案:To achieve the above object, the present invention provides the following technical solutions:

本发明的第一个目的在于提供一种编码GA2ox-氧化酶的基因,所述基因的核苷酸序列如SEQ ID No.1所示。The first object of the present invention is to provide a gene encoding GA2ox-oxidase, and the nucleotide sequence of the gene is shown in SEQ ID No.1.

本发明的第二个目的在于提供所述编码GA2ox-氧化酶的基因的应用,所述编码GA2ox-氧化酶的基因用于预判芒果品种是否具有矮化特性。The second object of the present invention is to provide the application of the gene encoding GA2ox-oxidase for predicting whether mango varieties have dwarfing characteristics.

本发明的第三个目的在于提供一种GA2ox-氧化酶,所述GA2ox-氧化酶是由上述的基因编码。The third object of the present invention is to provide a GA2ox-oxidase, the GA2ox-oxidase is encoded by the above-mentioned gene.

作为优选,所述GA2ox-氧化酶的氨基酸序列如SEQ ID No.2所示;所述GA2ox-氧化酶由341个氨基酸组成,分子量为38729.40Da,理论等电点为6.56。Preferably, the amino acid sequence of the GA2ox-oxidase is shown in SEQ ID No. 2; the GA2ox-oxidase consists of 341 amino acids, the molecular weight is 38729.40 Da, and the theoretical isoelectric point is 6.56.

与现有技术相比,本发明具有如下有益效果:Compared with the prior art, the present invention has the following beneficial effects:

(1)本发明从供试材料中获取GA2ox-氧化酶基因序列,分析该基因理化活性,把该基因作为调控矮化性状的指标。(1) The present invention obtains the GA2ox-oxidase gene sequence from the test material, analyzes the physicochemical activity of the gene, and uses the gene as an index for regulating dwarfing traits.

(2)本发明涉及到该GA2ox-氧化酶基因克隆、与之相对应的氨基酸序列分析,通过半荧光定量方法测定GA2ox-氧化酶基因表达量,可以为早期预判供试材料是否具有矮化性状提供支持。(2) The present invention involves the cloning of the GA2ox-oxidase gene and the analysis of the corresponding amino acid sequence. The semi-fluorescence quantitative method is used to determine the expression of the GA2ox-oxidase gene, which can be used to predict whether the test material has dwarfing in the early stage. traits are supported.

附图说明Description of drawings

图1为GA2ox-氧化酶基因中间片段PCR扩增结果图;Fig. 1 is the result of PCR amplification of the intermediate fragment of GA2ox-oxidase gene;

图2为GA2ox-氧化酶基因3'端PCR扩增结果图;Figure 2 is a graph showing the results of PCR amplification of the 3' end of the GA2ox-oxidase gene;

图3为GA2ox-氧化酶基因5'端PCR扩增结果图;Figure 3 is a graph showing the results of PCR amplification of the 5' end of the GA2ox-oxidase gene;

图4-6为芒果GA2ox与其它植物GA2ox同源性比对结果示意图;Figure 4-6 is a schematic diagram of the homology comparison results of mango GA2ox and other plant GA2ox;

其中,Dz:榴莲;Hb:橡胶树;Hu:锦葵;Jc:麻风树;Me:木薯;Mg:芒果;Rc:蓖麻;Tc:可可;Among them, Dz: durian; Hb: rubber tree; Hu: mallow; Jc: jatropha; Me: cassava; Mg: mango; Rc: castor; Tc: cocoa;

图7为GA2ox编码蛋白的信号肽及跨膜结构域分析图;Figure 7 is an analysis diagram of the signal peptide and transmembrane domain of the GA2ox-encoded protein;

图8为GA2ox编码蛋白二级结构分析图;Figure 8 is an analysis diagram of the secondary structure of the protein encoded by GA2ox;

图9为GA2ox编码蛋白疏水性分析图;Fig. 9 is the hydrophobicity analysis diagram of GA2ox-encoded protein;

图10为芒果GA2ox系统进化树;Figure 10 is a phylogenetic tree of mango GA2ox;

图11为不同物候期金煌芒和桂七芒中GA2ox基因表达量图。Figure 11 is a graph of GA2ox gene expression in Jinhuangmang and Guiqimang in different phenological stages.

具体实施方式Detailed ways

下面结合对本发明专利的技术方案进行清楚、完整的描述,显然,所描述的实施例是本发明的一部分实施例,而不是全部的实施例。基于本发明中的实施例,本领域所属的技术人员在没有做出创造性劳动前提下所获得的所有其他实施例,都属于本发明保护的范围。The technical solutions of the patent of the present invention will be clearly and completely described below. Obviously, the described embodiments are part of the embodiments of the present invention, but not all of the embodiments. Based on the embodiments of the present invention, all other embodiments obtained by those skilled in the art without creative efforts shall fall within the protection scope of the present invention.

在实施例1中,主要仪器和试剂为:PCR仪:Takara;电泳仪:Bio-Rad;

Figure BDA0003583805890000031
2000分光光度计:Thermo;恒温摇床;
Figure BDA0003583805890000032
超保真DNA聚合酶:NEB;FirstChoice RLM-RACEKit:Thermo;2×Taq Master Mix(Dye Plus):Vazyme。In Example 1, the main instruments and reagents are: PCR instrument: Takara; Electrophoresis instrument: Bio-Rad;
Figure BDA0003583805890000031
2000 spectrophotometer: Thermo; constant temperature shaker;
Figure BDA0003583805890000032
Ultra-fidelity DNA polymerase: NEB; FirstChoice RLM-RACEKit: Thermo; 2 x Taq Master Mix (Dye Plus): Vazyme.

在实施例2中,主要仪器和试剂为:ABI 7900-Fast Real-Time PCR DetectionSystem:ABI;

Figure BDA0003583805890000033
2000分光光度计:Thermo;普通PCR仪:Takara;All-in-OneTMFirst-Strand cDNA Synthesis Kit:GeneCopoeia(Cat.No.AORT-0050);All-in-OneTMqPCR Mix:GeneCopoeia(Cat.No.AOPR-0200);EpcentreTM RNase R。In Example 2, the main instruments and reagents are: ABI 7900-Fast Real-Time PCR Detection System: ABI;
Figure BDA0003583805890000033
2000 Spectrophotometer: Thermo; General PCR Machine: Takara; All-in-One First-Strand cDNA Synthesis Kit: GeneCopoeia (Cat. No. AORT-0050); All-in-One qPCR Mix: GeneCopoeia (Cat. No. AOPR-0200); Epcentre RNase R.

实施例1:芒果GA2ox-氧化酶基因的克隆与序列分析 Example 1 : Cloning and sequence analysis of mango GA2ox-oxidase gene

一、RNA提取与提取1. RNA extraction and extraction

1.总RNA提取(Trizol法)1. Total RNA extraction (Trizol method)

(1)样品处理:取80-100mg芒果叶片至冷冻研钵中,加入液氮研磨至粉末状,转移至装有1mL Trizol的1.5mL离心管中,振荡混匀后室温静置约5min。(1) Sample processing: Take 80-100 mg of mango leaves into a freezing mortar, add liquid nitrogen to grind to powder, transfer to a 1.5 mL centrifuge tube containing 1 mL of Trizol, shake and mix well, and let stand at room temperature for about 5 minutes.

(2)相分离:每1mL Trizol加入0.2mL氯仿,振荡混匀15s后室温静置约3min,4℃,12000rpm,离心15min。(2) Phase separation: add 0.2 mL of chloroform to each 1 mL of Trizol, shake and mix for 15 s, then stand at room temperature for about 3 min, 4° C., 12000 rpm, and centrifuge for 15 min.

(3)沉淀:转移水相至新的1.5mL离心管中,每1mL Trizol加入0.5mL异丙醇,混匀后室温静置10min,4℃,12000rpm,离心10min。(3) Precipitation: transfer the aqueous phase to a new 1.5 mL centrifuge tube, add 0.5 mL of isopropanol per 1 mL of Trizol, mix well, let stand at room temperature for 10 min, 4°C, 12000 rpm, and centrifuge for 10 min.

(4)洗涤:弃上清,每1mL Trizol加入1mL75%的乙醇,混匀后4℃,7500rpm,离心5min。(4) Washing: discard the supernatant, add 1 mL of 75% ethanol to each 1 mL of Trizol, mix well, and centrifuge for 5 min at 4°C, 7500 rpm.

(5)溶解:弃上清,空气干燥RNA沉淀约5min(注意不要完全干燥,只需沉淀泛白即可),加入DEPC处理水溶解RNA沉淀。(5) Dissolution: Discard the supernatant, air dry the RNA precipitation for about 5 minutes (be careful not to dry it completely, only the precipitation is white), and add DEPC to treat the water to dissolve the RNA precipitation.

2.纯化提取的RNA2. Purification of Extracted RNA

(1)在微量离心管中配制下列反应液,50ul体系:(1) Prepare the following reaction solution in a microcentrifuge tube, 50ul system:

Figure BDA0003583805890000041
Figure BDA0003583805890000041

(2)在37℃下反应25min后,使Recombinant DNase I失活。(2) Recombinant DNase I was inactivated after 25 min of reaction at 37°C.

(3)加入10ul 3M醋酸钠和250ul冷乙醇,-80℃放置20min。(3) Add 10ul 3M sodium acetate and 250ul cold ethanol, and place at -80°C for 20min.

(4)在4℃下,12000rpm离心10min,弃上清。(4) Centrifuge at 12,000 rpm for 10 min at 4°C, and discard the supernatant.

(5)加入70%冷乙醇洗净,4℃,12000rpm离心5min,弃上清,干燥沉淀即可。(5) Add 70% cold ethanol to wash, centrifuge at 4°C and 12000rpm for 5min, discard the supernatant, and dry the precipitate.

二、克隆目的基因中间片段2. Cloning the intermediate fragment of the target gene

2.1根据GenBank中公布的植物的GA2ox基因cDNA序列,经过DNAMAN软件比对后,根据保守区域设计一对简并引物。2.1 Design a pair of degenerate primers according to the conserved region according to the cDNA sequence of the plant GA2ox gene published in GenBank and after the DNAMAN software alignment.

GA2ox-F:AAYGGYGATR TBGGHTGGRTYGAATAGA2ox-F: AAYGGYGATR TBGGHTGGRTYGAATA

GA2ox-R:TGCYTYACRCTYTTA AAYCTYCCATTWGTCAGA2ox-R: TGCYTYACRCTYTTA AAYCTYCCATTWGTCA

2.2反转录中间片段2.2 Reverse transcription of intermediate fragments

(1)解冻First-Strand cDNA Synthesis Kit的试剂,上下轻柔颠倒混匀,短暂离心后放置冰上待用。(1) Thaw the reagents of the First-Strand cDNA Synthesis Kit, mix by gently inverting, centrifuge briefly, and place on ice for later use.

(2)冰上配制RNA-Primer Mix,在预冷的RNase-free反应管内加入以下试剂至总体积13μL;(2) Prepare RNA-Primer Mix on ice, add the following reagents to a pre-cooled RNase-free reaction tube to a total volume of 13 μL;

Figure BDA0003583805890000051
Figure BDA0003583805890000051

(3)混匀RNA-Primer Mix,进行短暂离心,65℃变性10min后立即放于冰上;(3) Mix the RNA-Primer Mix, centrifuge briefly, denature it at 65°C for 10 min, and place it on ice immediately;

(4)在RNA-Primer Mix反应管内加入以下试剂至总体积25μL;(4) Add the following reagents to the RNA-Primer Mix reaction tube to a total volume of 25 μL;

Figure BDA0003583805890000052
Figure BDA0003583805890000052

(5)混匀反应Mix,短暂离心后37℃孵育1h;(5) Mix the reaction mix, briefly centrifuge and incubate at 37°C for 1h;

(6)反应结束后,85℃灭活处理5min,-20℃保存反转录产物待用。(6) After the reaction, inactivate at 85°C for 5 min, and store the reverse transcription product at -20°C for later use.

2.3中间片段分析和分离2.3 Analysis and separation of intermediate fragments

中间片段PCR反应体系:Intermediate fragment PCR reaction system:

Figure BDA0003583805890000053
Figure BDA0003583805890000053

Figure BDA0003583805890000061
Figure BDA0003583805890000061

PCR反应程序为:94℃5min;94℃40s,58℃40s,72℃1min,35个循环;72℃10min;4℃10min;结束后将PCR反应产物在质量分数为1%的琼脂糖凝胶电泳分析,结果见图1,并进行切胶回收目的片段。The PCR reaction program is: 94℃ for 5min; 94℃ for 40s, 58℃ for 40s, 72℃ for 1min, 35 cycles; 72℃ for 10min; 4℃ for 10min; Electrophoresis analysis, the results are shown in Figure 1, and gel cutting was performed to recover the target fragment.

从图1中可以看出,从芒果叶片中克隆出的GA2ox中间片段大小约为900bp。As can be seen from Figure 1, the size of the GA2ox intermediate fragment cloned from mango leaves is about 900 bp.

2.4目的片段回收2.4 Target fragment recovery

(1)将50μL的反应体系全部加入到1%琼脂糖凝胶的点样孔中,在样品的一侧点入DNA Marker DM 2000。(1) Add 50 μL of the reaction system to the spotting well of 1% agarose gel, and spot DNA Marker DM 2000 on one side of the sample.

(2)恒压120V,电泳30min左右,根据条带移动的位置,判断何时终止跑胶。(2) Constant voltage 120V, electrophoresis for about 30min, according to the position of the band movement, judge when to terminate the gel running.

(3)在紫外灯下,根据Marker的位置,对目的条带进行切割回收,利用DNA琼脂糖胶回收试剂盒纯化目的基因全长片段。(3) Under the ultraviolet lamp, according to the position of the Marker, the target band is cut and recovered, and the full-length fragment of the target gene is purified by the DNA agarose recovery kit.

(4)将切割的凝胶快速放入离心管中,根据凝胶的重量,评估其体积的大小。(4) Quickly put the cut gel into a centrifuge tube, and evaluate its volume according to the weight of the gel.

(5)向凝胶中加入同体积的Binding Buffer,65℃,5min,至凝胶全部融化。(5) Add the same volume of Binding Buffer to the gel at 65°C for 5 min until the gel is completely melted.

(6)将融化液吸入到HiBind DNA Mini柱子里,然后把柱子放入到离心管中,10000g,室温,离心1min。弃废液,留柱子,直至所有的融化液完成此步骤。(6) Suction the thaw solution into the HiBind DNA Mini column, then put the column into a centrifuge tube, centrifuge at 10000g, room temperature for 1min. Discard the waste solution and leave the column until all the thaw solution has completed this step.

(7)向柱子中加入300μL的XP2,10000g,室温,离心1min。弃废液,留柱子。(7) Add 300 μL of XP2 to the column, 10000 g, room temperature, and centrifuge for 1 min. Discard the waste liquid and keep the column.

(8)加入700μL的SPW Wash buffer于柱子中,10000g,室温,离心1min,弃废液。重复此步骤一次。(8) Add 700 μL of SPW Wash buffer to the column, 10000 g, room temperature, centrifuge for 1 min, and discard the waste liquid. Repeat this step once.

(9)室温,13000g,空转2min,去除残余废液。(9) Room temperature, 13000g, idling for 2min, to remove residual waste liquid.

(10)把柱子放入新的离心管中,将30μL的Elution Buffer滴入到膜中央,室温,2min,然后13000g,离心2min,洗脱DNA。(10) Put the column into a new centrifuge tube, drop 30 μL of Elution Buffer into the center of the membrane, at room temperature for 2 minutes, and then centrifuge at 13000g for 2 minutes to elute the DNA.

2.5T载体连接及转化2.5T vector ligation and transformation

I、连接I. Connection

PCR产物4μL,PEASY-T1克隆载体1μL,轻轻混合,室温下反应5min。反应结束后,将离心管置于冰上。4 μL of PCR product and 1 μL of PEASY-T1 cloning vector were mixed gently and reacted at room temperature for 5 min. After the reaction is complete, place the centrifuge tube on ice.

II、转化II. Transformation

(1)自-80℃冰箱中取出大肠杆菌感受态细胞DH5a,放入冰中直至完全溶解,轻轻混匀。(1) Take out the E. coli competent cell DH5a from the -80°C refrigerator, put it in ice until it is completely dissolved, and mix gently.

(2)吸50μL感受态细胞放入灭过菌的离心管中,并向离心管中加入5μL重组质粒,轻轻混匀,冰上静置30min。(2) Aspirate 50 μL of competent cells into a sterilized centrifuge tube, add 5 μL of recombinant plasmid to the centrifuge tube, mix gently, and let stand on ice for 30 min.

(3)将冰浴后的离心管置于42℃水浴中热激90s,迅速移入装有冰的冰盒中2min,加入600ul LB培养液,放到37℃恒温摇床上进行220rpm培养1h。(3) Place the ice-bathed centrifuge tube in a 42°C water bath for heat shock for 90s, quickly move it into an ice box with ice for 2min, add 600ul LB culture medium, and place it on a 37°C constant temperature shaker for 1 hour at 220rpm.

(4)取50ul培养液涂于含有Amp的固体LB培养基上,待其干燥后放于37℃的培养箱中倒置培养。12h-16h后检查培养皿中是否出现菌落。(4) Take 50 ul of the culture solution and apply it to the solid LB medium containing Amp, and after drying, place it in an incubator at 37° C. for upside-down culture. After 12h-16h, check whether colonies appear in the petri dish.

(5)挑取单克隆划线培养,用基因上下游引物做菌落PCR扩增检测。(5) Pick a single clone for streak culture, and use the gene upstream and downstream primers for colony PCR amplification detection.

(6)挑取阳性单克隆进行摇菌并测序。(6) Pick positive single clones for shaking and sequencing.

三、克隆目的基因3'端3. Cloning the 3' end of the target gene

3.1根据已经获得的目的基因中间片段设计一对3'RACE引物。3.1 Design a pair of 3'RACE primers according to the obtained intermediate fragment of the target gene.

GA2ox 3'GSP-1:CCGCCATGTCCGGATATTCAGA2ox 3' GSP-1: CCGCCATGTCCGGATATTCA

GA2ox 3'GSP-2:ATCCAACAACACTTCCGGCTGA2ox 3'GSP-2: ATCCAACAACACTTCCGGCT

3.2获得3'cDNA3.2 Obtaining 3' cDNA

(1)在无RNA酶的离心管中加入以下成分,于冰上操作:(1) Add the following components to an RNase-free centrifuge tube and operate on ice:

Figure BDA0003583805890000081
Figure BDA0003583805890000081

(2)轻轻混匀,于42℃孵育1h,-20℃保存。(2) Mix gently, incubate at 42°C for 1 h, and store at -20°C.

3.3 Outer 3'PCR反应体系3.3 Outer 3' PCR reaction system

Figure BDA0003583805890000082
Figure BDA0003583805890000082

PCR反应程序为:94℃3min;94℃40s,60℃40s,72℃1min,35个循环;72℃10min;4℃10min。The PCR reaction program was: 94°C for 3 min; 94°C for 40s, 60°C for 40s, 72°C for 1 min, 35 cycles; 72°C for 10 min; 4°C for 10 min.

3.4 Inner 3'PCR反应体系3.4 Inner 3' PCR reaction system

Figure BDA0003583805890000083
Figure BDA0003583805890000083

Figure BDA0003583805890000091
Figure BDA0003583805890000091

PCR反应程序为:94℃3min;94℃40s,60℃40s,72℃1min,35个循环;72℃10min;4℃10min;结束后将PCR反应产物在质量分数为1%的琼脂糖凝胶电泳分析,结果见图2,并进行切胶回收目的片段连接到PEASY-T1克隆载体上转化感受态细胞,鉴定出阳性菌落后测序。The PCR reaction program is: 94℃ for 3min; 94℃ for 40s, 60℃ for 40s, 72℃ for 1min, 35 cycles; 72℃ for 10min; 4℃ for 10min; Electrophoresis analysis, the results are shown in Figure 2, and the target fragment was recovered by gel cutting and connected to the PEASY-T1 cloning vector to transform competent cells, and sequencing was performed after the positive colonies were identified.

从图2可以看出,根据已获得的GA2ox基因中间片段的序列信息设计特异引物GA2ox 3'GSP-1、GA2ox 3'GSP-2与各自的通用引物进行PCR扩增,得到约900bp大小的DNA片段。As can be seen from Figure 2, specific primers GA2ox 3'GSP-1, GA2ox 3'GSP-2 and their respective universal primers were designed according to the sequence information of the obtained GA2ox gene intermediate fragment for PCR amplification to obtain a DNA of about 900bp in size Fragment.

四、克隆目的基因5'端4. Cloning the 5' end of the target gene

4.1.根据已经获得的目的基因中间片段设计一对5'RACE引物。4.1. Design a pair of 5'RACE primers according to the obtained intermediate fragment of the target gene.

GA2ox 5'GSP-1:GCACCTGCATAATCAACCACC;GA2ox 5'GSP-1:GCACCTGCATAATCAACCACC;

GA2ox 5'GSP-2:GCTTGGGTACTGGCAAAAGC。GA2ox 5'GSP-2:GCTTGGGTACTGGCAAAAGC.

4.2 Outer 5'PCR反应体系4.2 Outer 5'PCR reaction system

Figure BDA0003583805890000092
Figure BDA0003583805890000092

PCR反应程序为:94℃3min;94℃40s,60℃40s,72℃1min,35个循环;72℃10min;4℃10min;The PCR reaction program was: 94°C for 3 min; 94°C for 40s, 60°C for 40s, 72°C for 1min, 35 cycles; 72°C for 10min; 4°C for 10min;

4.3 Inner 5'PCR反应体系4.3 Inner 5'PCR reaction system

Figure BDA0003583805890000101
Figure BDA0003583805890000101

PCR反应程序为:94℃3min;94℃40s,60℃40s,72℃1min,35个循环;72℃10min;4℃10min;结束后将PCR反应产物在质量分数为1%的琼脂糖凝胶电泳分析,结果见图3,并进行切胶回收目的片段连接到PEASY-T1克隆载体上转化感受态细胞,鉴定出阳性菌落后测序。The PCR reaction program is: 94℃ for 3min; 94℃ for 40s, 60℃ for 40s, 72℃ for 1min, 35 cycles; 72℃ for 10min; 4℃ for 10min; Electrophoresis analysis, the results are shown in Figure 3, and the target fragment was recovered by gel cutting and connected to the PEASY-T1 cloning vector to transform competent cells, and sequencing was performed after identifying positive colonies.

从图3可以看出,根据已获得的GA2ox基因中间片段的序列信息设计特异引物GA2ox 5'GSP-1、GA2ox 5'GSP-2与各自的通用引物进行PCR扩增,得到约500bp大小的DNA片段。As can be seen from Figure 3, specific primers GA2ox 5'GSP-1, GA2ox 5'GSP-2 and their respective universal primers were designed according to the sequence information of the obtained GA2ox gene intermediate fragment to carry out PCR amplification to obtain DNA with a size of about 500bp Fragment.

五、基因序列拼接与分析5. Gene sequence splicing and analysis

5.1利用DNAMAN对5'端、3'端及中间片段进行拼接,得到GA2ox基因的全长序列,翻译成蛋白质序列;再用BLAST进行氨基酸相似性检索,结果见图4-6。5.1 Use DNAMAN to splicing the 5' end, 3' end and the middle fragment to obtain the full-length sequence of the GA2ox gene and translate it into a protein sequence; then use BLAST to perform amino acid similarity search, and the results are shown in Figure 4-6.

从图4-6可以看出:GA2ox序列与橙子(XM_006467404.3)的一致性为79%;It can be seen from Figure 4-6 that the GA2ox sequence is 79% identical to orange (XM_006467404.3);

与柑橘(XM_006449629.2)的一致性为79%;79% consistency with citrus (XM_006449629.2);

与木薯(XM_021738345.1)的一致性为78%;78% consistency with cassava (XM_021738345.1);

与巴西橡胶树(XM_021820571.1)的一致性为78%;78% consistency with Hevea brasiliensis (XM_021820571.1);

与陆地棉(XM_016896568.1)的一致性为76%;The consistency with upland cotton (XM_016896568.1) is 76%;

与中棉(XM_012597405.1)的一致性为75%。The consistency with Chinese cotton (XM_012597405.1) is 75%.

5.2氨基酸序列理化性质分析5.2 Analysis of physicochemical properties of amino acid sequences

用protparam(http://web.expasy.org/protparam/)分析,GA2ox序列含有完整的开放阅读框,终止密码子分别为TGA。GA2ox编码341个氨基酸,产物的分子量为38729.40Da,理论等电点为6.56。其中酸性氨基酸(Asp+Glu)41个,碱性氨基酸(Arg+Lys)39个。该蛋白不稳定为不稳定蛋白,脂肪指数为80.32;亲水性总平均值为-0.301。Using protparam (http://web.expasy.org/protparam/) analysis, the GA2ox sequence contains a complete open reading frame, and the stop codon is TGA, respectively. GA2ox encodes 341 amino acids, the molecular weight of the product is 38729.40Da, and the theoretical isoelectric point is 6.56. Among them, there are 41 acidic amino acids (Asp+Glu) and 39 basic amino acids (Arg+Lys). The protein was unstable as an unstable protein, and the fat index was 80.32; the overall average hydrophilicity was -0.301.

用Phobius(http://phobius.sbc.su.se/)在线分析,分析结果见图7。Online analysis was performed with Phobius (http://phobius.sbc.su.se/), and the analysis results are shown in Figure 7.

从图7可以看出,GA2ox编码的蛋白质可能有信号肽。同时对GA2ox蛋白序列的跨膜结构域进行预测,结果显示,整条肽链都位于细胞膜外,结合上述信号肽的预测,推断该蛋白可能在细胞质基质中合成后,经蛋白质转运,直接锚定于细胞膜外的特定部位行使功能。As can be seen from Figure 7, the protein encoded by GA2ox may have a signal peptide. At the same time, the transmembrane domain of the GA2ox protein sequence was predicted. The results showed that the entire peptide chain was located outside the cell membrane. Combined with the prediction of the above signal peptide, it was inferred that the protein might be synthesized in the cytoplasmic matrix, and then directly anchored through protein transport. function at specific sites outside the cell membrane.

利用DNAMAN对GA2ox进行二级结构预测,预测结果见图8。The secondary structure of GA2ox was predicted by DNAMAN, and the prediction results are shown in Figure 8.

从图8可以看出,在GA2ox编码蛋白中,螺旋结构占21.14%,折叠占26.67%,无规则卷曲占52.19%。It can be seen from Figure 8 that among the proteins encoded by GA2ox, the helical structure accounts for 21.14%, the fold accounts for 26.67%, and the random coil accounts for 52.19%.

利用DNAMAN预测GA2ox的疏水性,预测结果见图9。The hydrophobicity of GA2ox was predicted by DNAMAN, and the prediction results are shown in Figure 9.

从图9可以看出,GA2ox多肽链第91位的谷氨酸具有最低值-3.18,亲水性最强,而第1位的蛋亮氨酸具有最高值2.84,疏水性最强。It can be seen from Figure 9 that the glutamic acid at the 91st position of the GA2ox polypeptide chain has the lowest value of -3.18, which is the most hydrophilic, while the methionine at the first position has the highest value of 2.84, and the most hydrophobicity.

为了研究Mango GA2ox的进化情况,构建了GA2ox氨基酸序列的系统进化树,如图10所示。In order to study the evolution of Mango GA2ox, a phylogenetic tree of the amino acid sequence of GA2ox was constructed, as shown in Figure 10.

从图10看出,芒果GA2ox与山黄麻Ga2ox(PON72625.1)、山黄麻Ga2ox(PON57518.1)、川桑Ga2ox(XP_010110967.1)、面包树Ga2ox1(ALS88210.1)、面包树Ga2ox2(ALS88211.1)、面包树Ga2ox3(ALS88212.1)亲缘关系较近;其次为蓖麻Ga2ox(XP_015574955.1)、麻风树Ga2ox(NP_001292962.1)、橡胶树Ga2ox(XP_021649315.1)、木薯Ga2ox(XP_021594037.1)、橡胶树Ga2ox(XP_021676263.1)。It can be seen from Figure 10 that mango GA2ox is closely related to Ga2ox (PON72625.1), Ga2ox (PON57518.1), Ga2ox (XP_010110967.1), Ga2ox1 (ALS88210.1), Ga2ox2 (ALS88211) .1), Baklava Ga2ox3 (ALS88212.1) are closely related; followed by Castor bean Ga2ox (XP_015574955.1), Jatropha Ga2ox (NP_001292962.1), Rubber tree Ga2ox (XP_021649315.1), Cassava Ga2ox (XP_021594037. 1), rubber tree Ga2ox (XP_021676263.1).

实施例2:基因相对量PCR检测 Example 2 : Gene relative PCR detection

利用Beacon Designer设计引物,探究GA20ox基因在“金煌芒”(乔化特性)和“桂七芒”(矮化特性)不同时期中的表达情况。Beacon Designer was used to design primers to explore the expression of GA20ox gene in different periods of "Jinhuangmang" (talling characteristic) and "Guiqimang" (dwarfing characteristic).

以芒果actin内参基因设计actin-F和actin-R引物。根据已克隆得到的GA20ox序列设计特异引物GA20ox-YGF和GA20ox-YGR,cDNA的获得同实施例1。Actin-F and actin-R primers were designed with mango actin internal reference gene. Specific primers GA20ox-YGF and GA20ox-YGR were designed according to the cloned GA20ox sequence, and the cDNA was obtained as in Example 1.

PCR定量反应步骤如下:PCR quantitative reaction steps are as follows:

1)将All-in-OneTM qPCR Mix在室温下融解,轻柔地上下颠倒混匀并进行短暂离心。1) Thaw the All-in-One qPCR Mix at room temperature, mix by gentle inversion and centrifuge briefly.

2)冰上配制PCR Reaction Mix,包括2×All-in OneTM qPCR Mix 10μL、qPCRPrimer(1μmol/L)2μL、cDNA Template 2μL,加入ddH2O使终体积至20μL。在试验中设计了NTC(no template control)为阴性对照,即用水代替模板cDNA,其他试剂不变,从而确保体系无污染。2) Prepare PCR Reaction Mix on ice, including 10 μL of 2×All-in One TM qPCR Mix, 2 μL of qPCR Primer (1 μmol/L), 2 μL of cDNA Template, and add ddH 2 O to make the final volume to 20 μL. In the experiment, NTC (no template control) was designed as a negative control, that is, the template cDNA was replaced by water, and other reagents remained unchanged, so as to ensure that the system was free of contamination.

3)将反应管进行短暂离心,确保所有反应液在反应管底部。3) Briefly centrifuge the reaction tube to ensure that all the reaction solution is at the bottom of the reaction tube.

PCR反应程序为95℃10min;95℃10s,60℃20s,72℃15s,40个循环;72℃10min。PCR反应结束后,进行溶解曲线分析,即温度控制在72-95℃,每间隔10s升高0.5℃,最后25℃保持30s。试验设置3次重复。The PCR reaction program was 95 °C for 10 min; 95 °C for 10 s, 60 °C for 20 s, 72 °C for 15 s, 40 cycles; 72 °C for 10 min. After the PCR reaction, the melting curve analysis was performed, that is, the temperature was controlled at 72-95 °C, increased by 0.5 °C every 10 s, and finally held at 25 °C for 30 s. Trials were set up with 3 replicates.

采用7300System软件和2-ΔΔCt方法进行数据分析,结果见图11。Data analysis was performed using 7300System software and the 2- ΔΔCt method, and the results are shown in Figure 11.

由图11可知,在5个物候期时间段,具有矮化特性供试材料的GA20ox基因表达量远高于具有乔化特性种质,说明GA2ox基因具有调控植物矮化表型的作用。It can be seen from Figure 11 that in the five phenological periods, the GA20ox gene expression level of the test materials with dwarfing characteristics is much higher than that of the germplasm with arborization characteristics, indicating that the GA2ox gene has a role in regulating the dwarfing phenotype of plants.

综上,本发明通过半荧光定量分析法测定GA2ox-氧化酶基因表达量可以为早期预判供试材料是否具有矮化性状提供支持。In conclusion, the present invention can provide support for the early prediction of whether the test material has dwarfing traits by measuring the GA2ox-oxidase gene expression by semi-fluorescence quantitative analysis.

[1] SEQUENCE LISTING[1] SEQUENCE LISTING

[2] <110> 广西壮族自治区亚热带作物研究所[2] <110> Guangxi Zhuang Autonomous Region Subtropical Crops Research Institute

[3] <120> 一种编码GA2ox-氧化酶的基因及其在判断芒果矮化品种中的应用[3] <120> A gene encoding GA2ox-oxidase and its application in judging mango dwarf varieties

[4] <130> 2020[4] <130> 2020

[5][5]

[6] <160> 2[6] <160> 2

[7][7]

[8] <170> PatentIn version 3.3[8] <170> PatentIn version 3.3

[9] <210> 1[9] <210> 1

[10] <211> 2075[10] <211> 2075

[11] <212> DNA[11] <212> DNA

[12] <213> 人工序列[12] <213> Artificial sequences

[13][13]

[14] <400> 1[14] <400> 1

[15] acatggggga gagtggtact agtatagggc gattgggccc gacgtcgcat gctcccggcc 60[15] acatggggga gagtggtact agtatagggc gattgggccc gacgtcgcat gctcccggcc 60

[16] gccatggcgg ccgcgggaat tcgattaatg gcgatgttgg atggattgaa tacctcctct120[16] gccatggcgg ccgcgggaat tcgattaatg gcgatgttgg atggattgaa tacctcctct120

[17] tcaccgccaa tcaagattct aatctccaac gattcgttta tcctctcgga aaaaacccgg180[17] tcaccgccaa tcaagattct aatctccaac gattcgttta tcctctcgga aaaaacccgg180

[18] aaaagtttcg gtataaacct gcagaaaaaa tcattccttt tttattttcg tttgcatagc240[18] aaaagtttcg gtataaacct gcagaaaaaa tcattccttt tttattttcg tttgcatagc240

[19] tgtgttttat agtcttgttt ggtgttgctg cagtcgtggc aatttctgcc cgttctttcc300[19] tgtgttttat agtcttgttt ggtgttgctg cagtcgtggc aatttctgcc cgttctttcc300

[20] cttcctcaat ggcataaata ccaggcagac acacaaagct tctttatagt tagcaacgcc360[20] cttcctcaat ggcataaata ccaggcagac acacaaagct tctttatagt tagcaacgcc360

[21] tctctctgcc tctgtcttca tgcatcagca gcaaatcctc tcatttgccc atataaaccc420[21] tctctctgcc tctgtcttca tgcatcagca gcaaatcctc tcatttgccc atataaaccc420

[22] ttcaatctct tcagaccctt ctcaattctc accttctcct cttttccact ctcaatttct480[22] ttcaatctct tcagaccctt ctcaattctc accttctcct cttttccact ctcaatttct480

[23] ctctctgtct ctctctgtgt tttgtcagaa aaaactcggc caccatggtg gttctgtcac540[23] ctctctgtct ctctctgtgt tttgtcagaa aaaactcggc caccatggtg gttctgtcac540

[24] aaccagcatt agaacatttc tctataatcg aaacttacca gccttcaagc tgcttatact600[24] aaccagcatt agaacatttc tctataatcg aaacttacca gccttcaagc tgcttatact600

[25] caggaattcc agttgtagac atgagacacc ctgaagccaa gttccatgta gtggaagcct660[25] caggaattcc agttgtagac atgagacacc ctgaagccaa gttccatgta gtggaagcct660

[26] gtgaaaaata cggcttcttc aagctcatta accatgatgt tccgttggag ttcatggcca720[26] gtgaaaaata cggcttcttc aagctcatta accatgatgt tccgttggag ttcatggcca720

[27] atttagaagc cgaagctgtc aacttcttta acctccctca gtctgagaaa gacaaagctg780[27] atttagaagc cgaagctgtc aacttcttta acctccctca gtctgagaaa gacaaagctg780

[28] gaccccctga cccttatggc tatggcagca aaagcattgg ccccaatggt gatgttggtt840[28] gaccccctga cccttatggc tatggcagca aaagcattgg ccccaatggt gatgttggtt840

[29] ggattgaata tctcctcctc aactccaacc ctcaaatcac ttcacaaaaa actctcgcca900[29] ggattgaata tctcctcctc aactccaacc ctcaaatcac ttcacaaaaa actctcgcca900

[30] ttttcaaaca cagccctcat gatttccgga gtgctgtgga gaagtacata acagaaatga960[30] ttttcaaaca cagccctcat gatttccgga gtgctgtgga gaagtacata acagaaatga960

[31] agaaacttgc atatgaagtt cttgaattaa tggccgatgg gctaagaata gagccaagga1020[31] agaaacttgc atatgaagtt cttgaattaa tggccgatgg gctaagaata gagccaagga1020

[32] acattttcag tagattcata agggatgaaa aaagtgactc ctgtttcagg ctgaaccact1080[32] acattttcag tagattcata agggatgaaa aaagtgactc ctgtttcagg ctgaaccact1080

[33] acccaccatg tccagagctt caaacattga agaaaggaag caatttgatt gggttcggag1140[33] acccaccatg tccagagctt caaacattga agaaaggaag caatttgatt gggttcggag1140

[34] aacacacaga ccctcagatt ctttctgttc taagatctaa caatacttca ggacttgaaa1200[34] aacacacaga ccctcagatt ctttctgttc taagatctaa caatacttca ggacttgaaa1200

[35] tttgcttaag agatggcact tgggtttctg tccctgctga tcattcttcc tttttcctca1260[35] tttgcttaag agatggcact tgggtttctg tccctgctga tcattcttcc tttttcctca1260

[36] atgttggtga tgctctgcag gtaatgacta atgggagatt ccaaagtgtg aagcacagag1320[36] atgttggtga tgctctgcag gtaatgacta atgggagatt ccaaagtgtg aagcacagag1320

[37] tgttggctga cagagtgaaa tcaagaattt caatgatata ttttggaggg ccaccattga1380[37] tgttggctga cagagtgaaa tcaagaattt caatgatata ttttggaggg ccaccattga1380

[38] atgaaaagat tgcacctttg ccatgcctag tttcaaaaga agaagattgc ttgtacaagg1440[38] atgaaaagat tgcacctttg ccatgcctag tttcaaaaga agaagattgc ttgtacaagg1440

[39] agttcacttg gtgtgaatac aagtgctctg cctataagtc caagttggct gattataggc1500[39] agttcacttg gtgtgaatac aagtgctctg cctataagtc caagttggct gattataggc1500

[40] ttgggcagtt tgagaaatga aaaccaaaag gacacttccg taatttagca aaaattaaac1560[40] ttgggcagtt tgagaaatga aaaccaaaag gacacttccg taatttagca aaaattaaac1560

[41] tagccataca tggagaagaa tataaaatag agcctcaact tctcttgttt atttatcaac1620[41] tagccataca tggagaagaa tataaaatag agcctcaact tctcttgttt atttatcaac1620

[42] aactctgtac tagttaactg cagctacaat gttattatcc actagatctt gatcatgtta1680[42] aactctgtac tagttaactg cagctacaat gttattatcc actagatctt gatcatgtta1680

[43] aaataaatta taattttcaa cttattttca tattttattt tatgttaacc acagtttcaa1740[43] aaataaatta taattttcaa cttattttca tattttattt tatgttaacc acagtttcaa1740

[44] ttcccccttt gggtttctca ttgtcctgga atttaggcat tcaatttgag tatttgactt1800[44] ttcccccttt gggtttctca ttgtcctgga atttaggcat tcaatttgag tatttgactt1800

[45] ggcatacatg cacgtcattc ttatctataa ctatcgaata tagctgccat caaaagcttt1860[45] ggcatacatg cacgtcattc ttatctataa ctatcgaata tagctgccat caaaagcttt1860

[46] tgccagtacc caagcatgaa atgttttttc ctatctgtat tgatgatcaa tagagttgaa1920[46] tgccagtacc caagcatgaa atgttttttc ctatctgtat tgatgatcaa tagagttgaa1920

[47] ttactgttcg ttaatggaga tttctgtgtt gggtggttga ttatgcaggt gctgacaaat1980[47] ttactgttcg ttaatggaga tttctgtgtt gggtggttga ttatgcaggt gctgacaaat1980

[48] ggaagattta agagcgtaag gcaaaatgtt ggagactcat tacaggtata caatttgtac2040[48] ggaagattta agagcgtaag gcaaaatgtt ggagactcat tacaggtata caatttgtac2040

[49] agtttttacc aaaaaaaaaa aaaaaaaaaa aaaaa 2075[49] agtttttacc aaaaaaaaaa aaaaaaaaaa aaaaa 2075

[50][50]

[51] <210> 2[51] <210> 2

[52] <211> 341[52] <211> 341

[53] <212> PRT[53] <212> PRT

[54] <213> 人工序列[54] <213> Artificial sequences

[55][55]

[56] <400> 2[56] <400> 2

[57] Met Cys Phe Val Arg Lys Asn Ser Ala Thr Met Val Val Leu Ser Gln[57] Met Cys Phe Val Arg Lys Asn Ser Ala Thr Met Val Val Leu Ser Gln

[58] 1 5 10 15[58] 1 5 10 15

[59] Pro Ala Leu Glu His Phe Ser Ile Ile Glu Thr Tyr Gln Pro Ser Ser[59] Pro Ala Leu Glu His Phe Ser Ile Ile Glu Thr Tyr Gln Pro Ser Ser

[60] 20 25 30[60] 20 25 30

[61] Cys Leu Tyr Ser Gly Ile Pro Val Val Asp Met Arg His Pro Glu Ala[61] Cys Leu Tyr Ser Gly Ile Pro Val Val Asp Met Arg His Pro Glu Ala

[62] 35 40 45[62] 35 40 45

[63] Lys Phe His Val Val Glu Ala Cys Glu Lys Tyr Gly Phe Phe Lys Leu[63] Lys Phe His Val Val Glu Ala Cys Glu Lys Tyr Gly Phe Phe Lys Leu

[64] 50 55 60[64] 50 55 60

[65] Ile Asn His Asp Val Pro Leu Glu Phe Met Ala Asn Leu Glu Ala Glu[65] Ile Asn His Asp Val Pro Leu Glu Phe Met Ala Asn Leu Glu Ala Glu

[66] 65 70 75 80[66] 65 70 75 80

[67] Ala Val Asn Phe Phe Asn Leu Pro Gln Ser Glu Lys Asp Lys Ala Gly[67] Ala Val Asn Phe Phe Asn Leu Pro Gln Ser Glu Lys Asp Lys Ala Gly

[68] 85 90 95[68] 85 90 95

[69] Pro Pro Asp Pro Tyr Gly Tyr Gly Ser Lys Ser Ile Gly Pro Asn Gly[69] Pro Pro Asp Pro Tyr Gly Tyr Gly Ser Lys Ser Ile Gly Pro Asn Gly

[70] 100 105 110[70] 100 105 110

[71] Asp Val Gly Trp Ile Glu Tyr Leu Leu Leu Asn Ser Asn Pro Gln Ile[71] Asp Val Gly Trp Ile Glu Tyr Leu Leu Leu Asn Ser Asn Pro Gln Ile

[72] 115 120 125[72] 115 120 125

[73] Thr Ser Gln Lys Thr Leu Ala Ile Phe Lys His Ser Pro His Asp Phe[73] Thr Ser Gln Lys Thr Leu Ala Ile Phe Lys His Ser Pro His Asp Phe

[74] 130 135 140[74] 130 135 140

[75] Arg Ser Ala Val Glu Lys Tyr Ile Thr Glu Met Lys Lys Leu Ala Tyr[75] Arg Ser Ala Val Glu Lys Tyr Ile Thr Glu Met Lys Lys Leu Ala Tyr

[76] 145 150 155 160[76] 145 150 155 160

[77] Glu Val Leu Glu Leu Met Ala Asp Gly Leu Arg Ile Glu Pro Arg Asn[77] Glu Val Leu Glu Leu Met Ala Asp Gly Leu Arg Ile Glu Pro Arg Asn

[78] 165 170 175[78] 165 170 175

[79] Ile Phe Ser Arg Phe Ile Arg Asp Glu Lys Ser Asp Ser Cys Phe Arg[79] Ile Phe Ser Arg Phe Ile Arg Asp Glu Lys Ser Asp Ser Cys Phe Arg

[80] 180 185 190[80] 180 185 190

[81] Leu Asn His Tyr Pro Pro Cys Pro Glu Leu Gln Thr Leu Lys Lys Gly[81] Leu Asn His Tyr Pro Pro Cys Pro Glu Leu Gln Thr Leu Lys Lys Gly

[82] 195 200 205[82] 195 200 205

[83] Ser Asn Leu Ile Gly Phe Gly Glu His Thr Asp Pro Gln Ile Leu Ser[83] Ser Asn Leu Ile Gly Phe Gly Glu His Thr Asp Pro Gln Ile Leu Ser

[84] 210 215 220[84] 210 215 220

[85] Val Leu Arg Ser Asn Asn Thr Ser Gly Leu Glu Ile Cys Leu Arg Asp[85] Val Leu Arg Ser Asn Asn Thr Ser Gly Leu Glu Ile Cys Leu Arg Asp

[86] 225 230 235 240[86] 225 230 235 240

[87] Gly Thr Trp Val Ser Val Pro Ala Asp His Ser Ser Phe Phe Leu Asn[87] Gly Thr Trp Val Ser Val Pro Ala Asp His Ser Ser Phe Phe Leu Asn

[88] 245 250 255[88] 245 250 255

[89] Val Gly Asp Ala Leu Gln Val Met Thr Asn Gly Arg Phe Gln Ser Val[89] Val Gly Asp Ala Leu Gln Val Met Thr Asn Gly Arg Phe Gln Ser Val

[90] 260 265 270[90] 260 265 270

[91] Lys His Arg Val Leu Ala Asp Arg Val Lys Ser Arg Ile Ser Met Ile[91] Lys His Arg Val Leu Ala Asp Arg Val Lys Ser Arg Ile Ser Met Ile

[92] 275 280 285[92] 275 280 285

[93] Tyr Phe Gly Gly Pro Pro Leu Asn Glu Lys Ile Ala Pro Leu Pro Cys[93] Tyr Phe Gly Gly Pro Pro Leu Asn Glu Lys Ile Ala Pro Leu Pro Cys

[94] 290 295 300[94] 290 295 300

[95] Leu Val Ser Lys Glu Glu Asp Cys Leu Tyr Lys Glu Phe Thr Trp Cys[95] Leu Val Ser Lys Glu Glu Asp Cys Leu Tyr Lys Glu Phe Thr Trp Cys

[96] 305 310 315 320[96] 305 310 315 320

[97] Glu Tyr Lys Cys Ser Ala Tyr Lys Ser Lys Leu Ala Asp Tyr Arg Leu[97] Glu Tyr Lys Cys Ser Ala Tyr Lys Ser Lys Leu Ala Asp Tyr Arg Leu

[98] 325 330 335[98] 325 330 335

[99] Gly Gln Phe Glu Lys[99] Gly Gln Phe Glu Lys

[100] 340[100] 340

Claims (5)

1.一种编码GA2ox-氧化酶的基因,其特征在于:所述基因的核苷酸序列如SEQ ID No.1所示。1. A gene encoding GA2ox-oxidase, wherein the nucleotide sequence of the gene is shown in SEQ ID No.1. 2.一种权利要求1所述的编码GA2ox-氧化酶的基因的应用,其特征在于,所述编码GA2ox-氧化酶的基因用于预判芒果品种是否具有矮化特性。2. An application of the gene encoding GA2ox-oxidase according to claim 1, wherein the gene encoding GA2ox-oxidase is used to predict whether a mango variety has dwarfing characteristics. 3.一种GA2ox-氧化酶,其特征在于,所述GA2ox-氧化酶是由权利要求1所述的基因编码。3. A GA2ox-oxidase, wherein the GA2ox-oxidase is encoded by the gene of claim 1. 4.根据权利要求3所述的GA2ox-氧化酶,其特征在于,所述GA2ox-氧化酶的氨基酸序列如SEQ ID No.2所示。4. The GA2ox-oxidase according to claim 3, wherein the amino acid sequence of the GA2ox-oxidase is shown in SEQ ID No.2. 5.根据权利要求3所述的GA2ox-氧化酶,其特征在于,所述GA2ox-氧化酶由341个氨基酸组成,分子量为38729.40Da,理论等电点为6.56。5 . The GA2ox-oxidase according to claim 3 , wherein the GA2ox-oxidase consists of 341 amino acids, has a molecular weight of 38729.40 Da and a theoretical isoelectric point of 6.56. 6 .
CN202210361231.XA 2022-04-07 2022-04-07 Gene for encoding GA2 ox-oxidase and application thereof in judging dwarf mango variety Pending CN114591976A (en)

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CN116426537A (en) * 2023-04-12 2023-07-14 广西壮族自治区亚热带作物研究所(广西亚热带农产品加工研究所) A gene encoding DELLA5 protein and its application in judging mango dwarf varieties

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CN116286856A (en) * 2023-01-10 2023-06-23 广西壮族自治区亚热带作物研究所(广西亚热带农产品加工研究所) Gene for coding DELLA6 protein and application thereof in judging mango dwarf variety
CN116426537A (en) * 2023-04-12 2023-07-14 广西壮族自治区亚热带作物研究所(广西亚热带农产品加工研究所) A gene encoding DELLA5 protein and its application in judging mango dwarf varieties

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