CN114574381B - Antagonistic strain JYC 314 and its application - Google Patents
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Abstract
本发明涉及拮抗菌株JYC 314及其应用,属于植物病害生物防治技术领域,本发明提供的拮抗菌株JYC 314可显著抑制多种疮痂链霉菌和致病疫霉菌生长,能有效防治马铃薯疮痂病和晚疫病,可为马铃薯疮痂病和晚疫病的防治提供新的生防资源。The invention relates to antagonistic strains JYC 314 and applications thereof, belonging to the technical field of plant disease biological control. The antagonistic strains JYC 314 provided by the invention can significantly inhibit the growth of various Streptomyces scab and Phytophthora infestans, and can effectively prevent potato scab and It can provide new biocontrol resources for the prevention and control of potato scab and late blight.
Description
技术领域technical field
本发明属于植物病害生物防治技术领域,具体的说,本发明属于植物病害生物防治技术领域,具体涉及一株抑制马铃薯疮痂链霉菌和致病疫霉菌生长的拮抗菌株JYC 314。The invention belongs to the technical field of plant disease biological control, specifically, the invention belongs to the technical field of plant disease biological control, and specifically relates to an
背景技术Background technique
马铃薯疮痂病是由链霉菌(Streptomyces.spp)侵染引起的一种典型的土传病害,链霉菌只侵染马铃薯表皮,不深入薯肉,在块茎表面结痂形成疮痂病斑,致使薯块外观品质下降,严重影响马铃薯产业,特别是种薯产业的发展。目前,国内外学者报道了很多关于马铃薯疮痂病的防治方法,主要集中在抗病品种选育、水分调控、调节土壤酸碱度、轮作并施用绿肥、化学防治和生物防治等方面。查阅文献可知,目前已经鉴定的马铃薯疮痂病原菌种类有S.scabies、S.acidiscabies、S.turigidiscabies等26种。据有关资料报道,对马铃薯疮痂病病原菌有一定抑制作用的拮抗菌株主要有:简单芽孢杆菌、贝莱斯芽孢杆菌、卡氏芽孢杆菌、解淀粉芽孢杆菌、棉铃虫拟青霉菌、棘孢木霉、桔假丝酵母菌等,但并不是拮抗菌株都对所有的疮痂链霉菌具有抑制作用。对于马铃薯疮痂病生防资源而言,生防资源较为匮乏,主要芽孢杆菌为主,抑菌谱单一,抑菌作用不明显,加之疮痂病原菌种类繁多,组成复杂,这给马铃薯疮痂病的防治带来了挑战。因此,需要筛选更多对多种疮痂链霉菌具有抑制效果良好的生防菌。Potato scab is a typical soil-borne disease caused by the infection of Streptomyces.spp. Streptomyces only infect the potato epidermis, not deep into the potato flesh. The decline in appearance quality has seriously affected the development of the potato industry, especially the seed potato industry. At present, scholars at home and abroad have reported many methods for the prevention and treatment of potato scab, mainly focusing on the selection of disease-resistant varieties, water control, soil pH adjustment, crop rotation and application of green manure, chemical control and biological control. According to the literature, 26 species of potato scab pathogens have been identified so far, including S.scabies, S.acidiscabies, and S.turigidiscabies. According to relevant data reports, the antagonistic strains that have a certain inhibitory effect on the pathogenic bacteria of potato scab mainly include: Bacillus simplex, Bacillus velesi, Bacillus carinii, Bacillus amyloliquefaciens, Paecilomyces bollworm, Trichoderma aculeatus , Candida citri, etc., but not all antagonistic strains have inhibitory effect on all Streptomyces scabies. For potato scab bio-control resources, bio-control resources are relatively scarce, mainly Bacillus, single bacteriostatic spectrum, no obvious bacteriostatic effect, in addition, there are many kinds of scab pathogens and their composition is complex, which makes the prevention and treatment of potato scab more difficult. Here comes the challenge. Therefore, it is necessary to screen more biocontrol bacteria with good inhibitory effect on various Streptomyces scabies.
马铃薯晚疫病是由卵菌纲致病疫霉[Phytophthorainfestans(Mont.)deBary]引起的一种毁灭性病害,晚疫病菌能够侵染马铃薯全株,叶、叶柄、茎及块茎均能被危害。目前在国内外对马铃薯晚疫病的防治措施中,化学防治仍然占据重要地位。在晚疫病流行期,化学防治是目前控制马铃薯晚疫病流行的主要措施,采用喷施甲霜灵类、烯酰吗啉、霜霉威氟吡菌胺等药剂并结合使用预警系统的方式指导马铃薯晚疫病的防控,可收到很好的防病增产的效果。虽然化学防治是预防马铃薯病害的有效手段,也是最广泛采用的措施之一,但是长期频繁使用化学药剂容易污染环境,致使农产品农药残留超标;同时也会导致病原菌对化学药剂产生耐药性甚至抗药性,使晚疫病防治效果下降,甚至完全失效。Potato late blight is a devastating disease caused by Oomycetes Phytophthora infestans (Mont.) deBary. Late blight can infect the whole potato plant, and leaves, petioles, stems and tubers can be harmed. At present, chemical control still occupies an important position in the control measures of potato late blight at home and abroad. During the epidemic period of late blight, chemical control is the main measure to control the epidemic of potato late blight at present. The spraying of metalaxyl, dimethomorph, downylofenac, etc. combined with the use of early warning system is used to guide potato late blight. The prevention and control of the disease can have a good effect of disease prevention and yield increase. Although chemical control is an effective means of preventing potato diseases and one of the most widely used measures, the frequent use of chemicals for a long time can easily pollute the environment, resulting in excessive pesticide residues in agricultural products; at the same time, it will also cause pathogens to develop resistance or even resistance to chemicals. Medicinal properties, so that the control effect of late blight is reduced, or even completely ineffective.
采用生物防治植物病害是利用自然界中原本存在的有益微生物对靶标病原微生物的拮抗作用,来控制病原微生物的危害,具有较小的环境风险,是一种与环境友好的防治技术。随着人们对食品安全、生态安全的重视,生物防治已经成为实现现代农业可持续发展的重要策略之一,利用有益微生物防治植物病害具有广阔的前景。The use of biological control of plant diseases is to use the antagonism of beneficial microorganisms originally existing in nature to target pathogenic microorganisms to control the harm of pathogenic microorganisms. It has less environmental risk and is an environmentally friendly control technology. With people's attention to food safety and ecological safety, biological control has become one of the important strategies to realize the sustainable development of modern agriculture, and the use of beneficial microorganisms to control plant diseases has broad prospects.
发明内容SUMMARY OF THE INVENTION
本发明旨在提供一株可显著抑制多种疮痂链霉菌和致病疫霉菌生长的拮抗菌株,能有效防治马铃薯疮痂病和晚疫病。The invention aims to provide an antagonistic strain that can significantly inhibit the growth of various Streptomyces scab and Phytophthora infestans, and can effectively prevent and treat potato scab and late blight.
为实现上述目的,本发明是通过如下技术方案实现的:To achieve the above object, the present invention is achieved through the following technical solutions:
本发明提供了一种拮抗菌株JYC 314(铜绿假单胞菌Pseudomonasaeruginosa),目前保藏于中国普通微生物菌种保藏管理中心(China General Microbiological CultureCollection Center,CGMCC)),地址为北京市朝阳区北辰西路1号院3号中国科学院微生物研究所,其保藏编号为CGMCC NO.24047,保藏日期为 2021年12月06日。The invention provides an antagonistic strain JYC 314 (Pseudomonas aeruginosa Pseudomonasaeruginosa), which is currently preserved in the China General Microbiological Culture Collection Center (CGMCC), and the address is Beichen West Road, Chaoyang District, Beijing. No. 1, No. 3, Institute of Microbiology, Chinese Academy of Sciences, the deposit number is CGMCC No. 24047, and the deposit date is December 06, 2021.
本发明提供了该拮抗菌株JYC 314在防治植物病害中的应用;植物病害为马铃薯的晚疫病或疮痂病。The invention provides the application of the antagonistic strain JYC 314 in preventing and treating plant diseases; the plant diseases are late blight or scab of potato.
本发明提供了该拮抗菌株JYC 314在制备植物病害或病原菌抑制剂中的应用;病原菌为疮痂链霉菌或致病疫霉菌;所述植物病害为马铃薯的晚疫病或疮痂病。The invention provides the application of the antagonistic strain JYC 314 in the preparation of plant disease or pathogenic bacteria inhibitor; the pathogenic bacteria is Streptomyces scab or Phytophthora infestans; the plant disease is late blight or scab of potato.
本发明还提供了一种病原菌抑制剂,包含该拮抗菌株JYC 314和/或拮抗菌株JYC314的菌液。The present invention also provides a pathogen inhibitor, comprising the antagonistic strain JYC314 and/or the bacterial liquid of the antagonistic strain JYC314.
本发明的有益效果:Beneficial effects of the present invention:
本发明从马铃薯疮痂病发病较重的田块中健康植株的根际土壤中取样分离拮抗菌株,通过平板对峙法和纸片法筛选并验证拮抗菌株,主要从形态学、生理生化和分子生物学的角度对所获拮抗菌株进行鉴定,旨在为马铃薯疮痂病和晚疫病的防治提供新的生防资源。该拮抗菌株JYC 314可显著抑制多种疮痂链霉菌和致病疫霉菌生长,能有效防治马铃薯疮痂病和晚疫病。In the invention, the antagonistic strains are sampled and isolated from the rhizosphere soil of healthy plants in the fields with severe potato scab disease, and the antagonistic strains are screened and verified by the flat plate confrontation method and the paper disc method. The obtained antagonistic strains were identified from the perspective of this study, aiming to provide new biocontrol resources for the prevention and treatment of potato scab and late blight. The antagonistic strain JYC 314 can significantly inhibit the growth of a variety of Streptomyces scab and Phytophthora infestans, and can effectively prevent and treat potato scab and late blight.
附图说明Description of drawings
图1是菌株JYC 314对马铃薯疮痂链霉菌的抑制效果-平板对峙试验;Fig. 1 is the inhibitory effect of
图2是菌株JYC 314对马铃薯晚疫病病菌的抑制效果-平板对峙试验;Fig. 2 is the inhibitory effect of bacterial strain JYC 314 on potato late blight-plate confrontation test;
图3是菌株JYC 314基于16SrDNA序列构建的系统发育进化树;Figure 3 is a phylogenetic tree constructed by
图4是菌株JYC 314菌悬液对多种马铃薯疮痂病链霉菌的抑制效果-纸片法;Fig. 4 is the inhibitory effect of bacterial strain JYC 314 bacterial suspension on a variety of potato scab Streptomyces-disc method;
图5是菌株JYC 314对多种致病疫霉菌生长的抑制效果—菌丝重量法;Fig. 5 is the inhibitory effect of
图6是菌株JYC 314形态学鉴定;Figure 6 is the morphological identification of
图7是菌株JYC 314的生理生化测定-糖酵解试验;a:对照;b:拮抗菌株JYC 314;Figure 7 is the physiological and biochemical assay of strain JYC 314 - glycolysis test; a: control; b: antagonistic strain JYC 314;
图8是菌株JYC 314的生理生化测定-大分子物质的水解试验;a:对照;b:拮抗菌株JYC 314;Figure 8 is the physiological and biochemical assay of strain JYC 314-hydrolysis test of macromolecular substances; a: control; b: antagonistic strain JYC 314;
图9是菌株JYC 314的生理生化测定-IMViC试验;a:对照;b:拮抗菌株JYC 314。Figure 9 is a physiological and biochemical assay of strain JYC 314-IMViC test; a: control; b:
具体实施方式Detailed ways
为了使本发明的目的、技术方案和有益效果更加清楚,下面将对本发明的优选实施例进行详细的说明,以方便技术人员理解。In order to make the objectives, technical solutions and beneficial effects of the present invention clearer, the preferred embodiments of the present invention will be described in detail below to facilitate the understanding of the skilled person.
实施例1:马铃薯疮痂病拮抗菌株JYC 314的分离与纯化Example 1: Isolation and purification of potato scab antagonistic strain JYC 314
1.土样采集1. Soil sample collection
从云南的马铃薯疮痂病发病田块中采集健康植株的根际土壤,采集深度为10-20cm,用无菌自封袋密封好后带回实验室,保存于4℃冰箱,用于拮抗菌株的分离。The rhizosphere soil of healthy plants was collected from the field of potato scab disease in Yunnan, the collection depth was 10-20cm, sealed with a sterile ziplock bag, brought back to the laboratory, and stored in a refrigerator at 4°C for the isolation of antagonistic strains .
2.供试靶标病原微生物2. Test target pathogenic microorganisms
3株马铃薯疮痂链霉菌(S.scabies、S.acidiscabies、S.turigidiscabies),3株马铃薯晚疫病菌(P.infestans),菌株编号及生理小种类型分别为SNK-Q9(1.2.3.4.5.6.7.8.9.10.11)、DQ-1(1.2.3.4.5.10)、ML-S13-418 (1.2.4.5.6.10),上述菌株均由云南农业大学植物保护学院马铃薯病害研究室提供。3 strains of Streptomyces scabies (S.scabies, S.acidiscabies, S.turigidiscabies) and 3 strains of P.infestans, the strain number and race type are SNK-Q9 (1.2.3.4.5.6 .7.8.9.10.11), DQ-1 (1.2.3.4.5.10), ML-S13-418 (1.2.4.5.6.10), the above strains were all provided by the Potato Disease Laboratory, School of Plant Protection, Yunnan Agricultural University.
3.供试培养基3. Test medium
疮痂链霉菌培养采用高氏一号培养基或燕麦琼脂培养基,细菌培养采用牛肉膏蛋白胨培养基。致病疫霉菌采用黑麦番茄培养基培养。具体培养基配方如下:The culture of Streptomyces scabies was carried out using Gao's No. 1 medium or oat agar medium, and the bacterial culture was carried out using beef extract peptone medium. Phytophthora infestans was cultured in rye tomato medium. The specific medium formula is as follows:
燕麦琼脂培养基(OMA):20g燕麦片、20g琼脂条、水1000ml,pH7.2-7.4;Oat agar medium (OMA): 20g oat flakes, 20g agar strips, 1000ml water, pH7.2-7.4;
牛肉膏蛋白胨培养基(NA):3g牛肉膏、10g蛋白胨、水1000ml,20g琼脂条,pH7.4-7.6;Beef extract peptone medium (NA): 3g beef extract, 10g peptone, 1000ml water, 20g agar strip, pH7.4-7.6;
黑麦番茄培养基:70g黑麦、150m番茄汁、水850ml、1.2g碳酸钙、17g琼脂条,自然pH;Rye tomato medium: 70g rye, 150m tomato juice, 850ml water, 1.2g calcium carbonate, 17g agar strips, natural pH;
4.拮抗菌株JYC 314的分离和纯化4. Isolation and purification of
采用热处理土壤稀释分离法分离菌株,挑取单菌落菌株划线培养,连续纯化3次,以1:1混合于70%的甘油中,-80℃冰箱保存备用。The strains were isolated by heat-treated soil dilution and isolation method, single colony strains were picked and streaked, purified 3 times in a row, mixed with 70% glycerol at 1:1, and stored in a -80°C refrigerator for later use.
5.OMA培养基的制备:按照上述培养基配方称取各物质后,将琼脂条和燕麦片各放入400ml水中浸泡 30min,利用果汁机将燕麦片打碎后和琼脂条一起加热煮沸,待培养基冷却后,1%氢氧化钠溶液调节培养基pH为7.2-7.4,分装于2个1000ml三角瓶中,每瓶500ml,密封好后放入高压灭菌锅中于121℃灭菌30min,待气压降至0Mpa时,再灭菌一次,将培养基倒入90mm培养平板,超净工作台冷却吹干备用。5. Preparation of OMA medium: after weighing each substance according to the above-mentioned medium formula, put the agar strips and oat flakes into 400ml of water and soak them for 30min, use a juicer to break the oat flakes and heat and boil them together with the agar strips. After the medium is cooled, the pH of the medium is adjusted to 7.2-7.4 by 1% sodium hydroxide solution, and then packed into two 1000ml conical flasks, each 500ml, sealed and placed in an autoclave for sterilization at 121°C for 30min , when the air pressure drops to 0Mpa, sterilize it again, pour the medium into a 90mm culture plate, and cool it on the ultra-clean workbench to dry it for later use.
6.链霉菌菌悬液的制备:吸取本实验室保存的链霉菌菌株菌悬液于OMA培养基平板表面,无菌金属涂布器均匀涂抹,封口膜密封后将其倒置于微生物培养箱,28℃暗培养7-10天,待培养基表面长满疮痂链霉菌后,于超净工作台上往培养皿中加入2ml无菌水,利用无菌刮铲将链霉菌从培养基表面刮下,移液枪吸取皿内液体冲刷培养基表面2-3次,将皿内液体转移至5ml无菌离心管中备用。6. Preparation of Streptomyces bacteria suspension: Draw the Streptomyces strain bacteria suspension preserved in the laboratory on the surface of the OMA medium plate, spread it evenly with a sterile metal applicator, seal it with a parafilm and place it upside down in a microbial incubator. Incubate in the dark at 28°C for 7-10 days. After the surface of the medium is covered with Streptomyces scabies, add 2ml of sterile water to the petri dish on the ultra-clean workbench, and use a sterile spatula to scrape the Streptomyces from the surface of the medium , the pipette gun sucks the liquid in the dish and flushes the surface of the medium for 2-3 times, and transfers the liquid in the dish to a 5ml sterile centrifuge tube for later use.
7.拮抗菌株的筛选7. Screening of antagonistic strains
采用平板对峙培养法初步测定菌株JYC 314对马铃薯疮痂链霉菌的拮抗作用。具体操作方法为:将纯化的菌株JYC 314接种于涂有疮痂链霉菌菌悬液的燕麦琼脂培养基平板,封口膜密封后放置于28℃培养箱中暗培养7天,以只接种疮痂链霉菌菌悬液的OMA平板为对照,培养时间截止时,根据培养基平板是否出现抑菌圈及抑菌圈大小来筛选出抑菌效果较好的菌株;平板对峙培养法结果表明,对照培养基中3种疮痂链霉菌均能够在燕麦琼脂培养基中正常生长并能布满整个培养基表面,没有出现抑菌圈;而接种JYC 314 菌株的培养基表面均出现了抑菌圈,说明菌株JYC 314均能抑制疮痂链霉菌S.turigidiscabies、S.acidiscabies、 S.scabies的生长,对3种疮痂链霉菌具有抑制性(图1)。The antagonistic effect of
采用平板对峙培养法测定菌株JYC 314对致病疫霉菌的拮抗作用,使用无菌打孔器分别在长满含有致病疫霉菌菌丝的黑麦番茄培养基平板和单独的黑麦番茄培养基平板上进行打孔,将含有致病疫霉菌丝的菌饼倒扣于黑麦培养基平板中央的小孔内,将待测菌株的菌体挑至含有致病疫霉菌菌饼的黑麦番茄培养基平板上,放置于20℃微生物培养箱中暗培养7-10天,培养结束时,采用十字交叉测量法测定菌落生长直径。平板对峙培养结果显示,对照培养基中致病疫霉均能够正常生长并能长满整个黑麦番茄培养基平板,菌落生长直径为56.19mm,3点接种和4点接种法的致病疫霉菌落生长直径分别为14.27mm、0mm,与对照相比均有显著性差异(P<0.05),说明菌株JYC 314对致病疫霉菌的生长具有显著的抑制作用(表1、图2)。The antagonism of
表1菌株JYC 314对马铃薯晚疫病病菌的抑制效果Table 1 Inhibitory effect of
注:表中小写字母表示0.05水平下的差异显著性Note: The lowercase letters in the table indicate the significance of the difference at the 0.05 level
综上所述,根据平板对峙培养的结果,获得了一株对马铃薯疮痂链霉菌和致病疫霉菌生长有抑制作用的菌株,将其命名为JYC 314。In summary, according to the results of the confrontation culture on the plate, a strain with inhibitory effect on the growth of Streptomyces scabbies and Phytophthora infestans was obtained, which was named
实施例2:拮抗菌株JYC 314的分子生物学鉴定Example 2: Molecular biological identification of
1.细菌基因组DNA的提取1. Extraction of bacterial genomic DNA
将实施例1制备并挑取纯化培养的菌株JYC314单菌落接种于牛肉膏蛋白胨培养平板上,28℃暗培养120小时后,采用上海生工EZUP柱式细菌基因组DNA抽提试剂盒提取菌株JYC314的基因组DNA,具体步骤如下:The single colony of the strain JYC314 prepared in Example 1 and purified and cultivated was inoculated on the beef extract peptone culture plate, and after culturing in the dark at 28°C for 120 hours, the bacterial genome DNA extraction kit of Shanghai Sangon EZUP column was used to extract the strain of JYC314. Genomic DNA, the specific steps are as follows:
(1)取0.5ml-1ml过夜培养的细菌菌液,加入到1.5ml离心管中,室温8000rpm,离心1min,弃上清,手机菌体。加入100微升BufferDigestion和80微升20mg/ml溶菌酶溶液,37℃水浴30min,水浴完成后加入20微升的Proteinase K溶液,震荡混匀。56℃水浴30min,至细胞完全裂解。水浴后加入20微升的 10mg/ml RNaseA溶液,室温放置2-5min,(1) Take 0.5ml-1ml of overnight cultured bacterial liquid, add it to a 1.5ml centrifuge tube, centrifuge at 8000rpm at room temperature for 1min, discard the supernatant, and remove the bacteria. Add 100 microliters of BufferDigestion and 80 microliters of 20 mg/ml lysozyme solution, and water bath at 37°C for 30 min. After the water bath is completed, add 20 microliters of Proteinase K solution, and shake to mix well. In a water bath at 56 °C for 30 min, the cells were completely lysed. After the water bath, add 20 microliters of 10 mg/ml RNaseA solution, leave it at room temperature for 2-5min,
(2)加入200微升的BufferBD,充分颠倒混匀,70℃水浴10min。(2) Add 200 microliters of BufferBD, fully invert and mix, and water bath at 70°C for 10 minutes.
(3)加入200微升的无水乙醇,充分颠倒混匀。(3) Add 200 microliters of absolute ethanol, fully invert and mix.
(4)将吸附柱放入收集管中,用移液枪将溶液和半透明纤维状悬浮物全部加入吸附柱中,静置2min,在12000rpm室温离心1min,倒掉收集管中的废液。(4) Put the adsorption column into the collection tube, add all the solution and translucent fibrous suspension into the adsorption column with a pipette, let stand for 2 min, centrifuge at 12000 rpm for 1 min at room temperature, and pour out the waste liquid in the collection tube.
(5)将吸附柱放入收集管中,加入500微升的PW Solution,10000rpm离心30s倒掉滤液;(5) put the adsorption column into the collection tube, add 500 microliters of PW Solution, centrifuge at 10000rpm for 30s and pour off the filtrate;
(6)将吸附柱放入收集管中,加入500微升的Wash Solution,10000rpm离心30s倒掉滤液;(6) put the adsorption column into the collection tube, add 500 microliters of Wash Solution, and centrifuge at 10000rpm for 30s to pour off the filtrate;
(7)将吸附柱放入收集管中,加入500微升的PW Solution,于12000rpm离心2min倒掉滤液;(7) put the adsorption column into the collection tube, add 500 microliters of PW Solution, centrifuge at 12000rpm for 2min and pour off the filtrate;
(8)取出吸附柱,放入1个新的1.5ml离心管中,加入50-100微升的CE Buffer静置3min,12000rpm 离心2min,收集DNA溶液。提取的DNA放置-20℃保存。(8) Take out the adsorption column, put it into a new 1.5 ml centrifuge tube, add 50-100 microliters of CE Buffer, let it stand for 3 minutes, centrifuge at 12000 rpm for 2 minutes, and collect the DNA solution. The extracted DNA was stored at -20°C.
2.16SrDNA序列的扩增2. Amplification of 16S rDNA sequences
以菌株JYC 314基因组DNA为模板,利用通用引物27F(5′-AGTTTGATCMTGGCTCAG-3′)和 1492R(5′-GGTTACCTTGTTACGACTT-3′)扩增菌株JYC 314的16SrDNA。PCR扩增条件为预变性 94℃/4min,变性94℃/45s,退火55℃/45s,延伸72℃/1min,循环30次,最后延伸72℃/10min。PCR反应体系如下:The 16S rDNA of
表2 PCR反应体系Table 2 PCR reaction system
PCR扩增产物经琼脂糖凝胶电泳检测,结果表明能够获得一条明亮的条带,获得大约1500bp左右的扩增产物,电泳条带回收后再使用上述引物对上述扩增基因片段进行测序,测序工作交由上海生工生物工程有限公司完成,测得该菌株的16SrDNA的核苷酸序列长度为1429bp,16SrDNA基因测序结果如下:The PCR amplification product was detected by agarose gel electrophoresis. The results showed that a bright band was obtained, and the amplification product of about 1500bp was obtained. After the electrophoresis band was recovered, the above-mentioned primers were used to sequence the above-mentioned amplified gene fragments. The work was completed by Shanghai Sangon Bioengineering Co., Ltd. The nucleotide sequence length of the 16SrDNA of the strain was measured to be 1429bp, and the sequencing results of the 16SrDNA gene were as follows:
ATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGAAGGGAGCTTGCTCCTGGATTCAGCGGCGGACG GGTGAGTAATGCCTAGGAATCTGCCTGGTAGTGGGGGATAACGTCCGGAAACGGGCGCTAATACCGCATACGTCCTGAGGGAGAAAGTGGG GGATCTTCGGACCTCACGCTATCAGATGAGCCTAGGTCGGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCCGTAACTGG TCTGAGAGGATGATCAGTCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAG CCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGTCTTCGGATTGTAAAGCACTTTAAGTTGGGAGGAAGGGCAGTAAGTTAATACCTTGCT GTTTTGACGTTACCAACAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTAATCGGAATTACTG GGCGTAAAGCGCGCGTAGGTGGTTCAGCAAGTTGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCCAAAACTACTGAGCTAGAGT ACGGTAGAGGGTGGTGGAATTTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACACCAGTGGCGAAGGCGACCACCTGGACTGAT ACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTAGCCGTTGGGAT CCTTGAGATCTTAGTGGCGCAGCTAACGCGATAAGTCGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGC CCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCTGGCCTTGACATGCTGAGAACTTTCCAGAGATGGAT TGGTGCCTTCGGGAACTCAGACACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAAC CCTTGTCCTTAGTTACCAGCACCTCGGGTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATC ATGGCCCTTACGGCCAGGGCTACACACGTGCTACAATGGTCGGTACAAAGGGTTGCCAAGCCGCGAGGTGGAGCTAATCCCATAAAACCGATCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGTGAATCAGAATGTCACGGTGAATACGTTCCCG GGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCTCCAGAAGTAGCTAGTCTAACCGCAAATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGAAGGGAGCTTGCTCCTGGATTCAGCGGCGGACG GGTGAGTAATGCCTAGGAATCTGCCTGGTAGTGGGGGATAACGTCCGGAAACGGGCGCTAATACCGCATACGTCCTGAGGGAGAAAGTGGG GGATCTTCGGACCTCACGCTATCAGATGAGCCTAGGTCGGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCCGTAACTGG TCTGAGAGGATGATCAGTCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAG CCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGTCTTCGGATTGTAAAGCACTTTAAGTTGGGAGGAAGGGCAGTAAGTTAATACCTTGCT GTTTTGACGTTACCAACAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTAATCGGAATTACTG GGCGTAAAGCGCGCGTAGGTGGTTCAGCAAGTTGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCCAAAACTACTGAGCTAGAGT ACGGTAGAGGGTGGTGGAATTTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACACCAGTGGCGAAGGCGACCACCTGGACTGAT ACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTAGCCGTTGGGAT CCTTGAGATCTTAGTGGCGCAGCTAACGCGATAAGTCGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGC CCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCTGGCCTTGACATGCTGAGAACTTTCCAGA GATGGAT TGGTGCCTTCGGGAACTCAGACACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAAC CCTTGTCCTTAGTTACCAGCACCTCGGGTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATC ATGGCCCTTACGGCCAGGGCTACACACGTGCTACAATGGTCGGTACAAAGGGTTGCCAAGCCGCGAGGTGGAGCTAATCCCATAAAACCGATCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGTGAATCAGAATGTCACGGTGAATACGTTCCCG GGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCTCCAGAAGTAGCTAGTCTAACCGCAA
将测序结果输入至美国国家生物技术信息中心(NCBI)数据库中,使用BLAST软件在GenBank中与其他的16SrDNA序列进行同源性比较,结果显示菌株JYC 314的16SrDNA序列与铜绿假单胞菌的多个菌株的16SrDNA序列完全吻合。选择相近的序列与菌株JYC 314的序列,使用系统分化分析软件MEGA7.0 以邻接法(Neighbor-Joining Method)构建系统发育进化树(图3),结果显示菌株JYC 314与铜绿单胞菌聚(Pseudomonas aeruginosa strainS-04 MT626658.1)在同一系统进化分支,进化关系最近,同源性达到 99.31%,初步判断该菌株JYC 314为铜绿假单胞菌(Pseudomonas aeruginosa)。The sequencing results were entered into the National Center for Biotechnology Information (NCBI) database, and the BLAST software was used to compare the homology with other 16S rDNA sequences in GenBank. The 16S rDNA sequences of these strains were completely matched. Select the sequence that is similar to that of
实施例3:拮抗菌株JYC 314菌悬液对马铃薯疮痂链霉菌生长的影响Example 3: Effect of
1.材料与方法1. Materials and methods
供试材料:Test material:
供试菌株:S.scabies、S.acidiscabies、S.turigidiscabies;Test strains: S.scabies, S.acidiscabies, S.turigidiscabies;
其他材料:18mm定性圆形滤纸片、金属涂布棒、90mm培养皿、封口膜、移液枪、离心管、无菌水、果汁机、金属刮铲、金属镊子、数显式游标卡尺;Other materials: 18mm qualitative round filter paper, metal coating rod, 90mm petri dish, parafilm, pipette gun, centrifuge tube, sterile water, juicer, metal spatula, metal tweezers, digital vernier caliper;
试验方法:experiment method:
OMA培养基和链霉菌菌悬液的制备方法同实施例1。The preparation methods of OMA medium and Streptomyces suspension are the same as in Example 1.
拮抗菌株菌悬液的制备:无菌枪头挑取已经纯化的拮抗菌株于含有1ml无菌水的5ml无菌离心管中,使用震荡混匀器涡旋震荡30S后备用。Preparation of the antagonistic strain bacterial suspension: Pick the purified antagonistic strain with a sterile pipette tip and put it in a 5ml sterile centrifuge tube containing 1ml sterile water, and use a shaker to vortex for 30S before use.
采用纸片法开展疮痂链霉菌抑制试验:吸取100μl链霉菌菌悬液于OMA培养基平板,使用无菌金属涂布棒将其涂抹均匀,无菌镊子夹取无菌滤纸片将其放置于培养平板中央,并沿周边轻按滤纸片,使其紧贴于培养基表面,移液枪吸取50μl待测菌株菌悬液,缓慢释放于滤纸片,待纸片表面晾干后,封口膜密封后将其放置微生物培养箱,28℃暗培养7-10天,以在涂有疮痂链霉菌菌悬液的OMA培养基平板上接种无菌水和放置滤纸片作为对照,培养时间截止后,采用十字交叉测量法测定抑菌圈直径。The Streptomyces scabii inhibition test was carried out by the paper disc method: suck 100 μl of Streptomyces scabies suspension on the OMA medium plate, spread it evenly with a sterile metal coating rod, and place sterile tweezers on the sterile filter paper and place it on the culture medium. In the center of the plate, gently press the filter paper along the periphery to make it close to the surface of the medium. Pipette aspirate 50 μl of the bacterial suspension of the strain to be tested and slowly release it on the filter paper. It was placed in a microbial incubator, and cultivated in the dark at 28°C for 7-10 days, inoculated with sterile water on the OMA medium plate coated with Streptomyces scabies bacterial suspension and placed a filter paper sheet as a control. The diameter of the zone of inhibition was determined by the cross-measurement method.
2.结果与分析2. Results and Analysis
采用抑菌圈法再次检测菌株JYC 314对3种马铃薯疮痂链霉菌S.turigidiscabies、S.acidiscabies和 S.scabies的抑制性。结果表明:测定结果为对照1和对照2均能长满培养基表面,没有出现抑菌圈。加入待测菌株JYC 314菌悬液的培养基表面出现了抑菌圈,抑菌圈直径分别为27.75mm、27.50mm、38.66mm,且与对照(0mm)相比均有显著性差异(p<0.05),说明菌株JYC 314能够显著抑制疮痂病原菌S.scabies、S.turigidiscabies、S.acidiscabies、的生长,对S.scabies的抑制效果最明显。(图4)The inhibition zone method was used to test the inhibitory activity of
表3菌株JYC 314对马铃薯疮痂病原菌生长的影响Table 3 Effects of
注:表中小写字母表示0.05水平下的差异显著性Note: The lowercase letters in the table indicate the significance of the difference at the 0.05 level
实施例4:拮抗菌株JYC 314对多种马铃薯致病疫霉菌生长的影响Example 4: Effects of
1.材料与方法1. Materials and methods
供试致病疫霉菌菌株编号及生理小种类型:SNK-Q9(1.2.3.4.5.6.7.8.9.10.11)、DQ-1(1.2.3.4.5.10)、ML-S13-418(1.2.4.5.6.10)。Tested Phytophthora infestans strain number and physiological race type: SNK-Q9 (1.2.3.4.5.6.7.8.9.10.11), DQ-1 (1.2.3.4.5.10), ML-S13-418 (1.2. 4.5.6.10).
其他材料:耙式竹签、5mm打孔器、90mm培养皿、封口膜、万分之一天平。Other materials: rake bamboo sticks, 5mm hole punch, 90mm petri dish, parafilm, 1/10,000 scale.
试验方法:experiment method:
黑麦番茄培养基制备方法同实施例1。The preparation method of rye tomato culture medium is the same as that in Example 1.
采用平板对峙培养法测定菌株JYC 314对致病疫霉菌的拮抗作用。具体操作方法为:使用无菌打孔器分别在长满含有致病疫霉菌菌丝的黑麦番茄培养基平板和单独的黑麦番茄培养基平板上进行打孔,将含有致病疫霉菌丝的菌饼倒扣于黑麦培养基平板中央的小孔内,将待测菌株的菌体挑至含有致病疫霉菌菌饼的黑麦番茄培养基平板上,放置于20℃微生物培养箱中暗培养7-10天,培养结束时,采用耙式竹签将培养皿中的致病疫霉菌菌丝从黑麦番茄培养基表面剥离,放置万分之一天平进行称重,以菌丝重量作为衡量菌丝生长的指标。The antagonistic effect of
2.结果与分析2. Results and Analysis
测定在菌株JYC 314胁迫下ML-S13-418、DQ-1、SNK-Q93个致病疫霉菌菌丝的重量。结果表明,对照培养中3个菌株均能够正常生长,菌丝重量分别为0.0169g、0.0488g、0.0618g,而接种有菌株JYC 314 的培养基中,ML-S13-418、DQ-1、SNK-Q9菌丝重量均显著低于对照(p<0.05),说明在菌株JYC 314的胁迫下,菌丝生长均受到了显著抑制,且随着JYC314接种量的增加,菌丝生长抑制愈加明显。The hyphae weights of ML-S13-418, DQ-1, SNK-Q93 Phytophthora infestans under the stress of
表4菌株JYC314对马铃薯晚疫病病菌菌丝生长量的影响Table 4 Effects of strain JYC314 on mycelial growth of P. infestans
注:表中小写字母表示0.05水平下的差异显著性Note: The lowercase letters in the table indicate the significance of the difference at the 0.05 level
实施例5:拮抗菌株JYC 314形态学鉴定Example 5: Morphological identification of
挑取分离纯化的JYC 314菌株单菌落划线于牛肉膏蛋白胨培养基上培养48小时后,观察菌落的形态特征,同时利用革兰氏染色法确定该菌的细胞壁类型。形态观察结果为菌株JYC 314在牛肉膏蛋白胨培养基上生长良好,菌落呈现乳白色或灰白色,圆形光滑湿润、中央隆起、边缘不整齐,菌体为杆状,大小为 0.6-0.8μm×2.0-5.0μm,革兰氏染色阳性,产芽孢,好氧或兼性厌氧生长。菌落周围呈淡绿色,随培养时间延长绿色加深,后期转为紫色或褐色(图6)。The isolated and purified single colony of
实施例6:拮抗菌株JYC 314生理生化测定结果Example 6: Physiological and biochemical assay results of
参见《常见细菌系统鉴定手册》对其菌体进行糖类发酵、明胶液化试验、硫化氢产生试验、淀粉水解试验、甲基红试验、VP试验、吲哚产生试验、牛奶石蕊试验、柠檬酸盐利用试验、脲酶产生试验等生理生化指标的测定。生理生化测定结果表明菌株JYC 314可分解葡萄糖产酸、产生明胶酶分解明胶、可利用柠檬酸盐,可产生H2S气体,牛奶石蕊试验结果为阳性;菌株JYC 314不降解乳糖,不水解淀粉,不产生脲酶分解尿素,甲基红试验、吲哚产生试验、VP试验结果均为阴性(见表5、图7-9)。See "Common Bacterial System Identification Manual" for sugar fermentation, gelatin liquefaction test, hydrogen sulfide production test, starch hydrolysis test, methyl red test, VP test, indole production test, milk litmus test, citric acid test. Determination of physiological and biochemical indicators such as salt utilization test and urease production test. Physiological and biochemical assay results show that
表5拮抗菌株JYC314的生理生化特征Table 5 Physiological and biochemical characteristics of antagonistic strain JYC314
注:表中“+”表示阳性结果;“-”表示阴性结果。Note: "+" in the table indicates a positive result; "-" indicates a negative result.
综上所述,根据菌株JYC 31416SrDNA序列分析、形态特征、生理生化特性,结合《常见细菌系统鉴定手册》判断该菌株JYC 314属于铜绿假单胞菌(Pseudomonas aeruginosa),且该菌株对多种马铃薯疮痂链霉菌和致病疫霉菌具有显著的抑制作用,可有效防治马铃薯疮痂病和晚疫病。To sum up, according to the SrDNA sequence analysis, morphological characteristics, physiological and biochemical characteristics of the strain JYC 31416, combined with the "Common Bacterial System Identification Manual", it is judged that the
最后说明的是,以上优选实施例仅用于说明本发明的技术方案而非限制,尽管通过上述优选实施例已经对本发明进行了详细的描述,但本领域技术人员应当理解,可以在形式上和细节上对其作出各种各样的改变,而不偏离本发明权利要求书所限定的范围。Finally, it should be noted that the above preferred embodiments are only used to illustrate the technical solutions of the present invention and not to limit them. Although the present invention has been described in detail through the above preferred embodiments, those skilled in the art should Various changes may be made in details without departing from the scope of the invention as defined by the claims.
SEQUENCE LISTINGSEQUENCE LISTING
<110> 云南农业大学<110> Yunnan Agricultural University
<120> 拮抗菌株JYC314及其应用<120> Antagonistic strain JYC314 and its application
<130> 2021<130> 2021
<160> 1<160> 1
<170> PatentIn version 3.5<170> PatentIn version 3.5
<210> 1<210> 1
<211> 1429<211> 1429
<212> DNA<212> DNA
<213> 人工序列<213> Artificial sequences
<400> 1<400> 1
atggctcaga ttgaacgctg gcggcaggcc taacacatgc aagtcgagcg gatgaaggga 60atggctcaga ttgaacgctg gcggcaggcc taacacatgc aagtcgagcg gatgaaggga 60
gcttgctcct ggattcagcg gcggacgggt gagtaatgcc taggaatctg cctggtagtg 120gcttgctcct ggattcagcg gcggacgggt gagtaatgcc taggaatctg cctggtagtg 120
ggggataacg tccggaaacg ggcgctaata ccgcatacgt cctgagggag aaagtggggg 180ggggataacg tccggaaacg ggcgctaata ccgcatacgt cctgagggag aaagtggggg 180
atcttcggac ctcacgctat cagatgagcc taggtcggat tagctagttg gtggggtaaa 240atcttcggac ctcacgctat cagatgagcc taggtcggat tagctagttg gtggggtaaa 240
ggcctaccaa ggcgacgatc cgtaactggt ctgagaggat gatcagtcac actggaactg 300ggcctaccaa ggcgacgatc cgtaactggt ctgagaggat gatcagtcac actggaactg 300
agacacggtc cagactccta cgggaggcag cagtggggaa tattggacaa tgggcgaaag 360agacacggtc cagactccta cgggaggcag cagtggggaa tattggacaa tgggcgaaag 360
cctgatccag ccatgccgcg tgtgtgaaga aggtcttcgg attgtaaagc actttaagtt 420cctgatccag ccatgccgcg tgtgtgaaga aggtcttcgg attgtaaagc actttaagtt 420
gggaggaagg gcagtaagtt aataccttgc tgttttgacg ttaccaacag aataagcacc 480gggaggaagg gcagtaagtt aataccttgc tgttttgacg ttaccaacag aataagcacc 480
ggctaacttc gtgccagcag ccgcggtaat acgaagggtg caagcgttaa tcggaattac 540ggctaacttc gtgccagcag ccgcggtaat acgaagggtg caagcgttaa tcggaattac 540
tgggcgtaaa gcgcgcgtag gtggttcagc aagttggatg tgaaatcccc gggctcaacc 600tgggcgtaaa gcgcgcgtag gtggttcagc aagttggatg tgaaatcccc gggctcaacc 600
tgggaactgc atccaaaact actgagctag agtacggtag agggtggtgg aatttcctgt 660tgggaactgc atccaaaact actgagctag agtacggtag agggtggtgg aatttcctgt 660
gtagcggtga aatgcgtaga tataggaagg aacaccagtg gcgaaggcga ccacctggac 720gtagcggtga aatgcgtaga tataggaagg aacaccagtg gcgaaggcga ccacctggac 720
tgatactgac actgaggtgc gaaagcgtgg ggagcaaaca ggattagata ccctggtagt 780tgatactgac actgaggtgc gaaagcgtgg ggagcaaaca ggattagata ccctggtagt 780
ccacgccgta aacgatgtcg actagccgtt gggatccttg agatcttagt ggcgcagcta 840ccacgccgta aacgatgtcg actagccgtt gggatccttg agatcttagt ggcgcagcta 840
acgcgataag tcgaccgcct ggggagtacg gccgcaaggt taaaactcaa atgaattgac 900acgcgataag tcgaccgcct ggggagtacg gccgcaaggt taaaactcaa atgaattgac 900
gggggcccgc acaagcggtg gagcatgtgg tttaattcga agcaacgcga agaaccttac 960gggggcccgc acaagcggtg gagcatgtgg tttaattcga agcaacgcga agaaccttac 960
ctggccttga catgctgaga actttccaga gatggattgg tgccttcggg aactcagaca 1020ctggccttga catgctgaga actttccaga gatggattgg tgccttcggg aactcagaca 1020
caggtgctgc atggctgtcg tcagctcgtg tcgtgagatg ttgggttaag tcccgtaacg 1080caggtgctgc atggctgtcg tcagctcgtg tcgtgagatg ttgggttaag tcccgtaacg 1080
agcgcaaccc ttgtccttag ttaccagcac ctcgggtggg cactctaagg agactgccgg 1140agcgcaaccc ttgtccttag ttaccagcac ctcgggtggg cactctaagg agactgccgg 1140
tgacaaaccg gaggaaggtg gggatgacgt caagtcatca tggcccttac ggccagggct 1200tgacaaaccg gaggaaggtg gggatgacgt caagtcatca tggcccttac ggccagggct 1200
acacacgtgc tacaatggtc ggtacaaagg gttgccaagc cgcgaggtgg agctaatccc 1260acacacgtgc tacaatggtc ggtacaaagg gttgccaagc cgcgaggtgg agctaatccc 1260
ataaaaccga tcgtagtccg gatcgcagtc tgcaactcga ctgcgtgaag tcggaatcgc 1320ataaaaccga tcgtagtccg gatcgcagtc tgcaactcga ctgcgtgaag tcggaatcgc 1320
tagtaatcgt gaatcagaat gtcacggtga atacgttccc gggccttgta cacaccgccc 1380tagtaatcgt gaatcagaat gtcacggtga atacgttccc gggccttgta cacaccgccc 1380
gtcacaccat gggagtgggt tgctccagaa gtagctagtc taaccgcaa 1429gtcacaccat gggagtgggt tgctccagaa gtagctagtc taaccgcaa 1429
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