CN114369165B - Bovine single-chain antibody of bovine-derived anti-staphylococcus aureus virulence factor GapC, preparation method and application thereof - Google Patents
Bovine single-chain antibody of bovine-derived anti-staphylococcus aureus virulence factor GapC, preparation method and application thereof Download PDFInfo
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- CN114369165B CN114369165B CN202210094005.XA CN202210094005A CN114369165B CN 114369165 B CN114369165 B CN 114369165B CN 202210094005 A CN202210094005 A CN 202210094005A CN 114369165 B CN114369165 B CN 114369165B
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Abstract
本发明公开了一种牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体、制备方法和用途,该抗体包括轻链可变区VL、重链可变区VH、连接肽Linker,并按照VL‑Linker‑VH的顺序连接构成牛源单链抗体片段VL‑Linker‑VH,所述轻链可变区VL氨基酸序列如SEQ ID No.1所示,所述重链可变区VH氨基酸序列如SEQ ID No.2所示。本发明单链抗体与金黄色葡萄球菌混合后,能与金黄色葡萄球菌甘油醛‑3‑磷酸脱氢酶GapC特异性结合,能够用于奶牛乳腺炎的防控的进一步研究,具有良好的应用前景。
The invention discloses a bovine-derived single-chain antibody against Staphylococcus aureus virulence factor GapC, a preparation method and an application thereof. The sequential connection of VL-Linker-VH constitutes the bovine single-chain antibody fragment VL-Linker-VH, the VL amino acid sequence of the light chain variable region is shown in SEQ ID No.1, and the VH amino acid sequence of the heavy chain variable region As shown in SEQ ID No.2. After the single-chain antibody of the present invention is mixed with Staphylococcus aureus, it can specifically bind to Staphylococcus aureus glyceraldehyde-3-phosphate dehydrogenase GapC, and can be used for further research on the prevention and control of mastitis in dairy cows, and has good application prospect.
Description
技术领域technical field
本发明涉及基因工程原核表达单链抗体领域,尤其涉及一种针对牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体、制备方法及其应用。The invention relates to the field of genetic engineering prokaryotic expression single-chain antibody, in particular to a single-chain antibody for bovine anti-staphylococcus aureus virulence factor GapC, a preparation method and application thereof.
背景技术Background technique
奶牛乳腺炎是影响奶牛业发展,给乳品生产造成巨大损失的一种常见多发病。引起奶牛乳腺炎的致病菌很多,其中金黄色葡萄球菌是最重要的致病菌之一,流行率达到了50%,导致严重的经济损失。因为金黄色葡萄球菌具有传染性,且治疗用的抗生素易产生耐药性,所以很难彻底治愈。金黄色葡萄球菌主要是通过产生多种致病因子而致病,目前,针对金黄色葡萄球菌全菌和多种毒力因子的疫苗也用于奶牛乳腺炎的预防,但是效果均不理想。Cow mastitis is a common frequently-occurring disease that affects the development of the dairy industry and causes huge losses to dairy production. There are many pathogenic bacteria that cause mastitis in dairy cows, among which Staphylococcus aureus is one of the most important pathogenic bacteria, and its prevalence rate reaches 50%, resulting in serious economic losses. Because Staphylococcus aureus is contagious and resistant to the antibiotics used for treatment, it is difficult to completely cure it. Staphylococcus aureus mainly causes disease by producing a variety of pathogenic factors. At present, vaccines against the whole strain of Staphylococcus aureus and various virulence factors are also used to prevent mastitis in cows, but the effects are not satisfactory.
单链抗体等基因工程抗体,以其独特的抗病毒和抗细菌作用及其能够大规模工程化制备的优势,显示了巨大的研发抗细菌药物的潜力,受到该领域高度重视。Genetically engineered antibodies such as single-chain antibodies, with their unique antiviral and antibacterial effects and the advantages of large-scale engineering preparation, have shown great potential in the development of antibacterial drugs, and have been highly valued in this field.
单链抗体是通过DNA重组技术将抗体轻链可变区VL和重链可变区VH通过一段连接短肽linker首尾连接而成,是保留完整抗原结合部位的最小功能片段。单链抗体的表达形式主要有融合表达,胞内表达和分泌表达三种形式。和完整抗体相比,单链抗体具有以下优点:1)分子量小,大小仅为完整抗体的六分之一,免疫原性较低;2)组织穿透力强,容易进入实体瘤周围的微循环;3)血液清除快,肾脏蓄积很少;4)无Fc段,非特异结合低;5)易于通过基因工程大量生产;6)易于基因操作,更易构建重组免疫毒素。The single-chain antibody is formed by linking the light chain variable region VL and the heavy chain variable region VH of the antibody through a short peptide linker head-to-tail through DNA recombination technology, and is the smallest functional fragment that retains the complete antigen-binding site. The expression forms of single-chain antibodies mainly include fusion expression, intracellular expression and secretory expression. Compared with intact antibodies, single-chain antibodies have the following advantages: 1) Small molecular weight, only one-sixth of the size of intact antibodies, and lower immunogenicity; 2) Strong tissue penetration, easy to enter microscopic cells around solid tumors circulation; 3) fast blood clearance, little accumulation in the kidney; 4) no Fc segment, low non-specific binding; 5) easy mass production through genetic engineering; 6) easy genetic manipulation, easier to construct recombinant immunotoxins.
因此,本领域迫切需要开发高特异性抗金黄色葡萄球菌全菌和多种毒力因子的单链抗体。Therefore, there is an urgent need in this field to develop single-chain antibodies with high specificity against whole bacteria of Staphylococcus aureus and various virulence factors.
发明内容Contents of the invention
有鉴于现有技术的上述缺陷,本发明提供了一种牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体、制备方法和用途。In view of the above-mentioned defects of the prior art, the present invention provides a bovine-derived single-chain antibody against Staphylococcus aureus virulence factor GapC, a preparation method and use thereof.
本发明的第一个方面是提供一种牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体,其特征在于,包括轻链可变区VL、重链可变区VH、连接肽Linker,并按照VL-Linker-VH的顺序连接构成牛源单链抗体片段VL-Linker-VH,所述轻链可变区VL氨基酸序列如SEQ IDNo.1所示,所述重链可变区VH氨基酸序列如SEQ ID No.2所示,所述连接肽Linker氨基酸序列为(GGGGGSGGGGS)。The first aspect of the present invention is to provide a bovine single-chain antibody against Staphylococcus aureus virulence factor GapC, which is characterized in that it includes a light chain variable region VL, a heavy chain variable region VH, and a connecting peptide Linker, And connect according to the sequence of VL-Linker-VH to form the bovine single-chain antibody fragment VL-Linker-VH, the VL amino acid sequence of the light chain variable region is as shown in SEQ ID No.1, and the VH amino acid sequence of the heavy chain variable region The sequence is shown in SEQ ID No.2, and the amino acid sequence of the connecting peptide Linker is (GGGGGSGGGGS).
所述牛源单链抗体片段VL-Linker-VH氨基酸序列如SEQ ID No.3所示。The amino acid sequence of the bovine single-chain antibody fragment VL-Linker-VH is shown in SEQ ID No.3.
本发明的第二个方面是提供一种DNA分子,可以编码所述牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体。The second aspect of the present invention is to provide a DNA molecule that can encode the bovine single-chain antibody against Staphylococcus aureus virulence factor GapC.
本发明的第三个方面是提供一种抑制奶牛乳腺炎的药物,该药物包括所述牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体。The third aspect of the present invention is to provide a medicament for inhibiting cow mastitis, the medicament comprises the bovine single-chain antibody against Staphylococcus aureus virulence factor GapC.
本发明的第四个方面是提供一种用于金黄色葡萄球菌的试剂盒,包括所述牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体,或编码所述牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体的基因片段以及与之交联的探针。A fourth aspect of the present invention is to provide a test kit for Staphylococcus aureus, comprising the bovine-derived single-chain antibody against the virulence factor GapC of Staphylococcus aureus, or encoding the bovine-derived anti-Staphylococcus aureus The gene fragment of the single-chain antibody of the bacterial virulence factor GapC and the probe cross-linked thereto.
本发明的第五个方面是提供一种牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体制备方法,其特征在于,包括以下步骤:The fifth aspect of the present invention is to provide a bovine-derived single-chain antibody preparation method against Staphylococcus aureus virulence factor GapC, which is characterized in that it includes the following steps:
步骤1、PCR扩增轻链可变区VL和重链可变区基因VH
采集患乳腺炎的奶牛血液,分离出外周血白细胞,提取总RNA,合成第1链cDNA,设计扩增抗体轻、重链的引物,采用RT-PCR扩增抗体编码基因的轻链可变区VL基因和重链可变区基因VH基因;Collect the blood of dairy cows with mastitis, isolate peripheral blood leukocytes, extract total RNA, synthesize the first strand cDNA, design primers for amplifying the light and heavy chains of the antibody, and use RT-PCR to amplify the light chain variable region of the antibody coding gene VL gene and heavy chain variable region gene VH gene;
步骤2、合成scFv基因
利用SOE-PCR法将连接轻链可变区VL基因和重链可变区基因,构建牛源性单链抗体基因,即scFv基因;Using the SOE-PCR method to connect the VL gene of the light chain variable region and the heavy chain variable region gene to construct a bovine-derived single-chain antibody gene, that is, the scFv gene;
步骤3、构建重组表达质粒
将步骤2中获得的scFv基因和pCANTAB5E载体分别经双酶切后,scFv基因插入pCANTAB5E载体,构建重组表达质粒;The scFv gene obtained in
优选地,切酶位点为Sfi I和Not I,其中SfiI:GGCCCAGCCGGCC,NotI:GCGGCCGC;Preferably, the Dicer sites are Sfi I and Not I, wherein SfiI: GGCCCAGCCGGCC, NotI: GCGGCCGC;
步骤4、建立初级单链抗体文库Step 4. Establish primary single-chain antibody library
将重组质粒转化入大肠杆菌,培养并用辅助噬菌体扩增建立初级单链抗体文库;Transform the recombinant plasmid into Escherichia coli, cultivate and amplify with helper phage to establish a primary single-chain antibody library;
步骤5、用原核表达的金黄色葡萄球菌毒力因子GapC作为包被抗原,富集淘选;
步骤6、采用phage ELISA筛选,用原核表达的金黄色葡萄球菌毒力因子GapC作为包被抗原,筛选阳性克隆;
步骤7、将筛选得到的阳性克隆酶切,回收单链抗体编码基因GapC-scFv,与同步酶切的原核表达载体pGEX-4T-1混匀后,14~16℃连接过夜,连接产物转化DH5α感受态细胞后,挑取单克隆,菌落PCR和质粒双酶切验证正确的克隆进行测序;
步骤8、测序正确的克隆进行质粒的提取,再将重组质粒转化到BL21感受态细胞后,挑取单克隆,菌落PCR和质粒双酶切验证正确的克隆测序,测序正确的即为构建成的单链抗体原核表达质粒pGEX-4T-1-GapC-scFv。Step 8. Extract the plasmid from the clone with the correct sequencing, and then transform the recombinant plasmid into BL21 competent cells, pick a single clone, colony PCR and double enzyme digestion of the plasmid to verify the correct clone sequencing, and the sequenced one is the constructed one Single-chain antibody prokaryotic expression plasmid pGEX-4T-1-GapC-scFv.
优选地,酶切位点为BamH I和Xho I,其中BamH I:GGATCC,Xho I:CTCGAG。Preferably, the restriction sites are BamH I and Xho I, wherein BamH I: GGATCC, Xho I: CTCGAG.
所述抗体轻、重链的引物分别为VL F、VL R、VH F和VH R,核苷酸序列如SEQ IDNo.4、SEQ ID No.5、SEQ ID No.6和SEQ ID No.7所示,VLF、VH R分别含有SfiI和NotI酶切位点,VH F、VL R含互补的Linker序列,步骤7中所述菌落PCR引物为VL-F、VH-R,核苷酸序列如SEQ ID No.8和SEQ ID No.9所示。The primers for the light and heavy chains of the antibody are VL F, VL R, VH F and VH R respectively, and the nucleotide sequences are as SEQ ID No.4, SEQ ID No.5, SEQ ID No.6 and SEQ ID No.7 As shown, VLF and VHR contain SfiI and NotI restriction sites respectively, VHF and VL R contain complementary Linker sequences, and the primers for colony PCR described in
所述PCR反应体系为25μL:2×PCR mix 12.5μL,模版cDNA 2μL,25μM上下游引物各1μL,ddH2O 8.5μL;PCR扩增程序:95℃预变性3min;94℃变性40s,64℃退火40s,72℃延伸1min,30个循环;最后72℃延伸10min。The PCR reaction system is 25 μL: 2×PCR mix 12.5 μL,
优选地,步骤5中富集淘选4轮。Preferably, 4 rounds of enrichment and panning are performed in
本发明的第六个方面是提供一种原核表达质粒pGEX-4T-1-GapC-scFv,包括牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体编码基因。The sixth aspect of the present invention is to provide a prokaryotic expression plasmid pGEX-4T-1-GapC-scFv, including the single-chain antibody encoding gene of bovine anti-Staphylococcus aureus virulence factor GapC.
本发明的有益技术效果:Beneficial technical effect of the present invention:
1、构建重组牛源单链抗体(scFv)时,按照VL-Linker-VH的顺序,将抗体轻链可变区VL和抗体重链可变区VH用中间的Linker进行连接,构成的牛源单链抗体片段VL-Linker-VH,这样连接被本发明证明构建的重组牛源scFv相比较一般的文献报道都是按照VH-Linker-VL的顺序连接更为有效。1. When constructing a recombinant bovine-derived single-chain antibody (scFv), according to the sequence of VL-Linker-VH, the antibody light chain variable region VL and the antibody heavy chain variable region VH are connected with the middle Linker to form a bovine-derived The single-chain antibody fragment VL-Linker-VH, the recombinant bovine scFv constructed by the present invention proved to be more effective than the general literature reports are connected in the order of VH-Linker-VL.
2、将筛选到的阳性克隆的单链抗体编码基因(scFv)克隆到原核表达质粒pET32a(+),构建成单链抗体原核表达质粒pET-32a-GapC-scFv,将该单链抗体与金黄色葡萄球菌混合后,在LB培养基中孵育,能与金黄色葡萄球菌甘油醛-3-磷酸脱氢酶GapC特异性结合,能够用于奶牛乳腺炎的防控的进一步研究,具有良好的应用前景。2. Cloning the single-chain antibody encoding gene (scFv) of the screened positive clone into the prokaryotic expression plasmid pET32a(+), constructing the single-chain antibody prokaryotic expression plasmid pET-32a-GapC-scFv, and combining the single-chain antibody with gold After Staphylococcus aureus is mixed and incubated in LB medium, it can specifically bind to Staphylococcus aureus glyceraldehyde-3-phosphate dehydrogenase GapC, which can be used for further research on the prevention and control of mastitis in dairy cows, and has good application prospect.
以下将结合附图对本发明的构思、具体结构及产生的技术效果作进一步说明,以充分地了解本发明的目的、特征和效果。The idea, specific structure and technical effects of the present invention will be further described below in conjunction with the accompanying drawings, so as to fully understand the purpose, features and effects of the present invention.
附图说明Description of drawings
图1是噬菌粒载体pCANTAB5E的结构图;Fig. 1 is the structural diagram of phagemid vector pCANTAB5E;
图2是phage ELISA筛选到的scFv阳性克隆;Figure 2 is the scFv positive clones screened by phage ELISA;
图3是原核表达筛选到的scFv阳性克隆基因的扩增片段电泳图;Fig. 3 is the electrophoresis diagram of the amplified fragment of the scFv positive clone gene screened by prokaryotic expression;
图4是scFv基因表达的蛋白SDS-PAGE检测图;Fig. 4 is the protein SDS-PAGE detection chart of scFv gene expression;
图5是scFv基因表达的蛋白Western Bloting检测图;Figure 5 is a protein Western Bloting detection diagram of scFv gene expression;
图6是GapC-scFv抑制金黄色葡萄球菌生长试验。Fig. 6 is a test of GapC-scFv inhibiting the growth of Staphylococcus aureus.
具体实施方式Detailed ways
以下参考说明书附图介绍本发明的多个优选实施例,使其技术内容更加清楚和便于理解。本发明可以通过许多不同形式的实施例来得以体现,本发明的保护范围并非仅限于文中提到的实施例。The following describes several preferred embodiments of the present invention with reference to the accompanying drawings, so as to make the technical content clearer and easier to understand. The present invention can be embodied in many different forms of embodiments, and the protection scope of the present invention is not limited to the embodiments mentioned herein.
实施例1牛源噬菌体单链抗体库的构建Example 1 Construction of bovine phage single-chain antibody library
1、采集患乳腺炎的奶牛血液,ELISA法检测血清抗体效价大于1:20000时,继续后续实验。用抗凝血提取牛外周血白细胞,用Trizol法(TRIZOL Reagent购自TaKaRa公司)提取总RNA。以提取的总RNA为模版,采用Oligo primer,根据反转录试剂盒(cDNA第1链合成试剂盒购自TaKaRa公司)的产品说明操作步骤,合成第1链cDNA。1. Collect the blood of dairy cows suffering from mastitis. When the serum antibody titer is greater than 1:20000 by ELISA, continue the follow-up experiment. Bovine peripheral blood leukocytes were extracted with anticoagulated blood, and total RNA was extracted by Trizol method (TRIZOL Reagent was purchased from TaKaRa Company). Using the extracted total RNA as a template, Oligo primer was used to synthesize the first-strand cDNA according to the product instructions of the reverse transcription kit (cDNA first-strand synthesis kit was purchased from TaKaRa Company).
2、分析已发表文献中的牛抗体编码基因可变区序列,根据其FR区设计扩增抗体轻、重链的引物(表1),其中VH F和VH R用于扩增VH区;VL F和VL R用于扩增VL区。其中,VLF、VH R分别含有SfiI和NotI酶切位点;VH F、VL R含互补的Linker序列(酶切位点和Linker序列在表1中用下划线标示出)。引物由上海生工生物工程技术服务有限公司合成。2. Analyze the variable region sequence of the bovine antibody coding gene in the published literature, and design primers for amplifying the light and heavy chains of the antibody according to the FR region (Table 1), wherein VHF and VHR are used to amplify the VH region; VL F and VL R are used to amplify the VL region. Wherein, VLF and VHR contain SfiI and NotI restriction sites respectively; VHF and VL R contain complementary Linker sequences (restriction sites and Linker sequences are underlined in Table 1). Primers were synthesized by Shanghai Sangon Bioengineering Technology Service Co., Ltd.
表1扩增抗体可变区的引物及其扩增片段大小Table 1 Primers for amplifying antibody variable regions and the size of their amplified fragments
3、VH和VL基因的扩增。以cDNA为模版,VH F、VH R为引物扩增VH基因;VL F、VL R为引物扩增VL基因。PCR反应体系为25μL:2×PCR mix 12.5μL,模版cDNA 2μL,上下游引物(25μM)各1μL,ddH2O 8.5μL。扩增程序如下:95℃预变性3min;94℃变性40s,64℃退火40s,72℃延伸1min,30个循环;最后72℃延伸10min。1.5%琼脂糖凝胶电泳鉴定产物并回收目的基因(根据AxyGEN公司提供的胶回收说明书操作)。3. Amplification of VH and VL genes. Using cDNA as a template, VH F and VH R were used as primers to amplify the VH gene; VL F and VL R were used as primers to amplify the VL gene. The PCR reaction system was 25 μL: 12.5 μL of 2×PCR mix, 2 μL of template cDNA, 1 μL of upstream and downstream primers (25 μM), and 8.5 μL of ddH 2 O. The amplification program was as follows: pre-denaturation at 95°C for 3 min; denaturation at 94°C for 40 s, annealing at 64°C for 40 s, extension at 72°C for 1 min, 30 cycles; final extension at 72°C for 10 min. The product was identified by 1.5% agarose gel electrophoresis and the target gene was recovered (operated according to the gel recovery instructions provided by AxyGEN).
4、scFv基因的获得。通过重组链延伸反应(SOE-PCR)将含有Linker序列的VL和VH基因连接为scFv基因(VL-linker-VH),并加入SfiI和NotI酶切位点。4. Acquisition of scFv gene. The VL and VH genes containing the Linker sequence were connected into a scFv gene (VL-linker-VH) by recombination chain extension reaction (SOE-PCR), and SfiI and NotI restriction sites were added.
5、初级文库的构建。如附图1噬菌粒载体pCANTAB5E的结构图所示,根据常规分子克隆方法(参照J.萨姆布鲁克等主编的《分子克隆实验指南》),scFv基因和pCANTAB5E载体分别经SfiINotI双酶切后,将scFv基因插入pCANTAB5E载体,构建重组表达质粒,并将其电转化TG1感受态细胞,转化50次,合并所有电转化培养液,取一小部分系列稀释后涂布于2YT-AG固体培养板,30℃过夜培养计算库容量(挑取克隆进行菌落PCR和质粒双酶切验证,测序验证库的多样性);通过菌落PCR计算阳性率,得到实际的库容量。将剩余的细菌培养液通过辅助噬菌体M13KO7拯救后建立初级文库。5. Construction of primary library. As shown in the structural diagram of the phagemid vector pCANTAB5E in accompanying drawing 1, according to the conventional molecular cloning method (referring to the "Molecular Cloning Experiment Guide" edited by J. Sambrook et al.), the scFv gene and the pCANTAB5E vector were double-digested with SfiINotI respectively , Insert the scFv gene into the pCANTAB5E vector to construct a recombinant expression plasmid, and electrotransform it into TG1 competent cells for 50 times, combine all the electrotransformation culture fluids, take a small part of serial dilution and spread it on a 2YT-AG solid culture plate , overnight culture at 30°C to calculate the library capacity (pick clones for colony PCR and plasmid double-enzyme digestion verification, and sequencing to verify the diversity of the library); calculate the positive rate by colony PCR to obtain the actual library capacity. The primary library was established after the remaining bacterial culture was rescued by helper phage M13KO7.
实施例2牛源抗金黄色葡萄球菌甘油醛-3-磷酸脱氢酶GapC单链抗体的筛选Example 2 Screening of bovine-derived anti-Staphylococcus aureus glyceraldehyde-3-phosphate dehydrogenase GapC single-chain antibody
1、富集淘选制备金黄色葡萄球菌(ATCC25923)金黄色葡萄球菌甘油醛-3-磷酸脱氢酶GapC原核表达产物,将其作为抗原,4℃包被过夜;用含4%脱脂奶粉的PBST封闭96孔板,37℃孵育2h;向96孔板中加入上述步骤中制备好的单链抗体噬菌体抗体库,37℃孵育2h,用PBST和PBS各洗10次,洗掉未结合的游离噬菌体;每孔加入100ul 0.2mol/L Gly-Hcl缓冲液(PH=2.2)洗脱特异性结合的噬菌体,加入50ul 1mol/L Tris-Hcl(PH=9.1)中和洗脱液;将剩余部分洗脱液感染大肠杆菌TG1后,重复上述步骤。如此重复3-5轮,在第一轮过后,要增加洗涤的严谨性:洗脱前用PBST洗脱20次后用PBS洗涤20次。1. Enrichment and panning to prepare Staphylococcus aureus (ATCC25923) prokaryotic expression product of glyceraldehyde-3-phosphate dehydrogenase GapC of Staphylococcus aureus, which was used as antigen, and coated overnight at 4°C; Block the 96-well plate with PBST and incubate at 37°C for 2h; add the single-chain antibody phage antibody library prepared in the above steps to the 96-well plate, incubate at 37°C for 2h, wash with PBST and
2、phage ELISA筛选从第四轮中随机挑取96个克隆,用M13K07拯救后制备重组噬菌体。将纯化后的金黄色葡萄球菌甘油醛-3-磷酸脱氢酶GapC原核表达蛋白用50mmol/L碳酸氢钠盐溶液(pH9.6)于4℃包被过夜,4%脱脂奶粉溶液封闭1h,用PBST(0.1%Tween20,以下同)洗涤3次;加入上述制备好的噬菌体单链抗体,37℃反应2h,PBST和PBS各洗涤6次;加入HRP-antiM13抗体100μL(1:4000),37℃反应1h,PBST和PBS各洗涤6次;TMB显色,2mol/L硫酸终止反应,酶标仪读取OD450值,同时设辅助噬菌体M13K07为阴性对照。ELISA结果的判定以P/N(P为阳性孔的OD450值,N为阴性孔的OD450值)表示,P/N≥2.1为阳性;1.5≤P/N<2.1为可疑;P/N<1.5为阴性phage ELISA筛选到的scFv阳性克隆结果如附图2所示,其中BlankControl为空白对照,Negative Control为阴性对照,scFv为阳性克隆,阳性克隆的OD450值很高,接近2.6;而阴性对照的OD450值小于0.4,两者比值大于2.1。2. phage ELISA screening 96 clones were randomly selected from the fourth round, rescued with M13K07 to prepare recombinant phage. The purified Staphylococcus aureus glyceraldehyde-3-phosphate dehydrogenase GapC prokaryotic expression protein was coated with 50mmol/L sodium bicarbonate salt solution (pH9.6) at 4°C overnight, and blocked with 4% skimmed milk powder solution for 1h.
实施例3单链抗体pGEX-4T-1-GapC-scFv的原核表达及纯化Example 3 Prokaryotic expression and purification of single chain antibody pGEX-4T-1-GapC-scFv
1重组质粒pGEX-4T-1-GapC-scFv的构建以阳性克隆菌株为模板,用特异性引物(如表2所示,下划线为酶切位点)扩增GapC-scFv目的基因,选择限制性内切酶BamH I和XhoI对目的基因和原核表达载体pGEX-4T-1进行双酶切,酶切后连接获得重组质粒,将其转化到DH5α感受态,菌落PCR和质粒双酶切验证正确的克隆送至上海铂尚生物技术有限公司测序;1 Construction of the recombinant plasmid pGEX-4T-1-GapC-scFv Using the positive cloned strain as a template, use specific primers (as shown in Table 2, the underlined restriction site) to amplify the GapC-scFv target gene, select the restriction Endonucleases BamH I and XhoI double-digested the target gene and the prokaryotic expression vector pGEX-4T-1, ligated to obtain the recombinant plasmid after digestion, transformed it into DH5α competent, colony PCR and plasmid double-digestion verified correctness The clones were sent to Shanghai Boshang Biotechnology Co., Ltd. for sequencing;
表2扩增抗体可变区的引物及其扩增片段大小Table 2 Primers for amplifying antibody variable regions and the size of their amplified fragments
测序正确的克隆进行质粒的提取,再将重组质粒转化到BL21感受态细胞后,挑取单克隆,菌落PCR和质粒双酶切验证正确的克隆送至上海铂尚生物技术有限公司测序,测序正确的即为构建成功的原核表达重组质粒pGEX-4T-1-GapC-scFv,如附图3所示。The clones with correct sequencing were extracted from the plasmids, and then the recombinant plasmids were transformed into BL21 competent cells, and single clones were picked, colony PCR and plasmid double enzyme digestion verified that the correct clones were sent to Shanghai Boshang Biotechnology Co., Ltd. for sequencing, and the sequencing was correct The successful construction of the prokaryotic expression recombinant plasmid pGEX-4T-1-GapC-scFv is shown in Figure 3.
2单链抗体GapC-scFv蛋白的纯化重组表达的融合蛋白含有GST-tag,采用GST预装重力柱(采购自上海生工生物工程股份有限公司)对蛋白进行纯化,具体步骤如说明书所示,纯化后再进行蛋白超滤,对收集的洗脱液进行SDS-PAGE以及Western Bloting分析,蛋白大小为44kD,结果如附图4和5所示,采用Bradford法对蛋白浓度进行测定,根据标准品绘制的标准曲线和样品所测得的OD值,得到单链抗体GapC-scfv蛋白的浓度约为350μg/mL。2 Purification of the single-chain antibody GapC-scFv protein The recombinantly expressed fusion protein contains GST-tag, and the protein is purified using a GST prepacked gravity column (purchased from Shanghai Sangon Bioengineering Co., Ltd.). The specific steps are as shown in the instructions. After purification, protein ultrafiltration was performed, and the collected eluate was analyzed by SDS-PAGE and Western Bloting. The protein size was 44kD. The results are shown in Figures 4 and 5. The protein concentration was determined by the Bradford method. According to the standard Based on the drawn standard curve and the measured OD values of the samples, the concentration of the single-chain antibody GapC-scfv protein was about 350 μg/mL.
实施例4重组scFv序列分析Example 4 Recombinant scFv sequence analysis
对获得的单链抗体编码基因进行测序,证明其按照正确的阅读框顺序插入到原核表达质粒pGEX-4T-1载体中,所述氨基酸序列如SEQ ID No.3所示,其序列顺序是VL-Linker-VH,氨基酸序列如SEQ ID No.3所示。The obtained single-chain antibody coding gene was sequenced to prove that it was inserted into the prokaryotic expression plasmid pGEX-4T-1 vector according to the correct reading frame sequence. The amino acid sequence is shown in SEQ ID No.3, and its sequence sequence is VL -Linker-VH, the amino acid sequence is as shown in SEQ ID No.3.
实施例5检测单链抗体GapC-scFv抑制金黄色葡萄球菌生长试验Example 5 Detection of single-chain antibody GapC-scFv inhibition of Staphylococcus aureus growth test
检测单链抗体GapC-scFv抑制金黄色葡萄球菌生长试验包括如下两个步骤,分别为:The test for detecting the inhibition of the growth of Staphylococcus aureus by the single-chain antibody GapC-scFv includes the following two steps, respectively:
1、实验方法和步骤1. Experimental methods and steps
本实验所用试剂为GapC-scFv重组蛋白、金黄色葡萄球菌ATCC25923、4%牛红细胞。The reagents used in this experiment were GapC-scFv recombinant protein, Staphylococcus aureus ATCC25923, and 4% bovine red blood cells.
利用0.9%生理盐水将GapC-scFv稀释至10、20、40,50ug/mL,按1:1比例与OD600约为0.6的金黄色葡萄球菌ATCC25923混合,加入200μLLB培养培养基于37℃振动培养,分别测定6h和12h金黄色葡萄球菌的OD600,其中以0.9%生理盐水为阳性对照,青霉素组做为阴性对照,每组设置三个重复。Dilute GapC-scFv to 10, 20, 40, 50ug/mL with 0.9% normal saline, mix it with Staphylococcus aureus ATCC25923 with an OD600 of about 0.6 at a ratio of 1:1, add 200μL LB to culture and culture based on shaking at 37°C, respectively The OD600 of Staphylococcus aureus was measured at 6h and 12h, wherein 0.9% normal saline was used as a positive control, and the penicillin group was used as a negative control, and each group was set for three repetitions.
按照说明书顺序依次加入各溶液,并注意避免产生气泡。Add each solution sequentially according to the instructions, and pay attention to avoid generating air bubbles.
按说明书将所需溶液依次加入后,作用相应时间,酶标仪440nm处测定各孔吸光度。After the required solutions were added sequentially according to the instructions, the absorbance of each well was measured at 440nm with a microplate reader for a corresponding time.
2、数据统计和实验结果2. Data statistics and experimental results
将10,20,40,50,100ug/mL的GapC-scFv分别与处于对数生长期的金黄色葡萄球菌共同孵育后,结果如附图6所示,6小时后得到不同浓度的GapC-scFv对金黄色葡萄球菌的抑制与生理盐水组比较均有显著差异;而12小时后从浓度为20ug/mL的GapC-scFv均对金黄色葡萄球菌的生长产生显著的抑制效果。After co-incubating 10, 20, 40, 50, 100ug/mL of GapC-scFv with Staphylococcus aureus in the logarithmic growth phase, the results are shown in Figure 6, and different concentrations of GapC-scFv were obtained after 6 hours The inhibition of Staphylococcus aureus was significantly different from that of the normal saline group; after 12 hours, GapC-scFv with a concentration of 20ug/mL had a significant inhibitory effect on the growth of Staphylococcus aureus.
GapC具有金黄色葡萄球菌糖酵解途径中关键酶GAPDH的活性,同时也是金黄色葡萄球菌感染奶牛乳腺炎的重要毒力因子,故通过对GapC毒力因子的单链抗体的制备,利用GapC的单链抗体对金黄色葡萄球菌的生长进行抑制,结果显示,筛选并制备得到的GapC-scFv具有良好的抑制金黄色葡萄球菌生长的效果。GapC has the activity of the key enzyme GAPDH in the glycolysis pathway of Staphylococcus aureus, and is also an important virulence factor for Staphylococcus aureus infected cow mastitis. The single-chain antibody inhibits the growth of Staphylococcus aureus, and the results show that the screened and prepared GapC-scFv has a good effect of inhibiting the growth of Staphylococcus aureus.
以上详细描述了本发明的较佳具体实施例。应当理解,本领域的普通技术无需创造性劳动就可以根据本发明的构思做出诸多修改和变化。因此,凡本技术领域中技术人员依本发明的构思在现有技术的基础上通过逻辑分析、推理或者有限的实验可以得到的技术方案,皆应在由权利要求书所确定的保护范围内。The preferred specific embodiments of the present invention have been described in detail above. It should be understood that those skilled in the art can make many modifications and changes according to the concept of the present invention without creative efforts. Therefore, all technical solutions that can be obtained by those skilled in the art based on the concept of the present invention through logical analysis, reasoning or limited experiments on the basis of the prior art shall be within the scope of protection defined by the claims.
序列表sequence listing
<110> 上海交通大学<110> Shanghai Jiao Tong University
<120> 一种牛源抗金黄色葡萄球菌毒力因子GapC的单链抗体、制备方法及其应用<120> A bovine single-chain antibody against Staphylococcus aureus virulence factor GapC, its preparation method and its application
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