CN114107359B - Method for improving cellulase expression capability of trichoderma reesei by regulating cell metabolism - Google Patents
Method for improving cellulase expression capability of trichoderma reesei by regulating cell metabolism Download PDFInfo
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Abstract
Description
技术领域technical field
本发明涉及基因工程领域,具体涉及一种通过调控细胞代谢提高里氏木霉表达纤维素酶能力的方法。The invention relates to the field of genetic engineering, in particular to a method for improving the ability of Trichoderma reesei to express cellulase by regulating cell metabolism.
背景技术Background technique
丝状真菌里氏木霉作为重要的工业生产菌株,广泛用于工业产品如:饲料酶、有机酸类、抗生素等的生产。它具有表达量高、分泌能力强等特点,同时它具有多种同真核生物类似的翻译后加工的方式,如糖基化、蛋白酶的切割和二硫键的形成等修饰。其混合发酵液中,纤维二糖水解酶的表达占胞外总分泌蛋白的50%以上。然而,纤维素酶的高成本仍然是纤维素生物炼制的主要瓶颈之一,因此需要继续开发新的方法,以提高纤维素酶的表达,降低应用成本。As an important industrial production strain, the filamentous fungus Trichoderma reesei is widely used in the production of industrial products such as feed enzymes, organic acids, antibiotics, etc. It has the characteristics of high expression and strong secretion ability, and at the same time it has a variety of post-translational processing methods similar to eukaryotes, such as glycosylation, protease cleavage and disulfide bond formation and other modifications. In the mixed fermentation broth, the expression of cellobiohydrolase accounted for more than 50% of the total extracellular secreted proteins. However, the high cost of cellulase is still one of the main bottlenecks in cellulose biorefinery, so it is necessary to continue to develop new methods to improve the expression of cellulase and reduce the cost of application.
在里氏木霉中,纤维素酶的表达受多个调控途径的影响。其中,主要调控是发生在转录水平,包括主要激活因子、抑制因等。氨基酸的生物合成是一个复杂的代谢过程,二硫键的氧化再折叠和通过分泌机制的蛋白质运输都需要能量。在里氏木霉中,蛋白质的产生给细胞带来了沉重的代谢负担,可能导致氨基酸和氧化还原能量物质供应的限制。一个经常被忽视的控制纤维素酶表达的阶段是细胞代谢。在丝状真菌尤其里氏木霉菌株中,很少有报道通过改变细胞自身的代谢途径来提高纤维素酶表达的报道。In T. reesei, cellulase expression is affected by multiple regulatory pathways. Among them, the main regulation occurs at the transcriptional level, including major activators, repressors, etc. Amino acid biosynthesis is a complex metabolic process that requires energy for both oxidative refolding of disulfide bonds and protein transport through secretory mechanisms. In Trichoderma reesei, protein production places a heavy metabolic burden on cells, potentially leading to limited supply of amino acids and redox energy species. An often overlooked stage that controls cellulase expression is cellular metabolism. In filamentous fungi, especially strains of Trichoderma reesei, there are few reports of increasing cellulase expression by altering the cell's own metabolic pathway.
已报道,在毕赤酵母中,对磷酸戊糖途径中的6-磷酸葡萄糖脱氢酶或者途径中不同基因的组合过表达进行了研究。结果发现,6-磷酸葡萄糖脱氢酶单独过表达对超氧化物歧化酶的表达无影响,组合6-磷酸葡萄糖脱氢酶和5-磷酸-核酮糖基因或者组合6-磷酸葡糖酸脱氢酶和5-磷酸-核酮糖基因过表达都对超氧化物歧化酶的产量有明显抑制作用。Glucose-6-phosphate dehydrogenase in the pentose phosphate pathway or combined overexpression of different genes in the pathway have been reported in Pichia pastoris. The results showed that overexpression of glucose-6-phosphate dehydrogenase alone had no effect on the expression of superoxide dismutase, and the combination of glucose-6-phosphate dehydrogenase and 5-phosphate-ribulose genes or the combination of glucose-6-phosphate dehydrogenase Both catalase and 5-phosphate-ribulose gene overexpression inhibited the production of superoxide dismutase.
因此,现有的基因工程改造的方法和调控基因的选择存在局限性,因此需要继续挖掘新型调控基因至关重要。Therefore, the existing genetic engineering methods and the selection of regulatory genes have limitations, so it is crucial to continue to explore new regulatory genes.
发明内容SUMMARY OF THE INVENTION
本发明的目的是提供一种通过调控细胞代谢提高里氏木霉表达纤维素酶能力的方法。The purpose of the present invention is to provide a method for improving the ability of Trichoderma reesei to express cellulase by regulating cell metabolism.
根据本发明的通过调控细胞代谢提高里氏木霉表达纤维素酶能力的方法,包括在里氏木霉中过表达里氏木霉调控基因72685的步骤,其中,所述里氏木霉调控基因72685为磷酸戊糖途径的6-磷酸葡糖酸脱氢酶基因,其核苷酸序列如SEQ ID NO:1所示。The method for improving the ability of Trichoderma reesei to express cellulase by regulating cell metabolism according to the present invention comprises the step of overexpressing the Trichoderma reesei
根据本发明的通过调控细胞代谢提高里氏木霉表达纤维素酶能力的方法,包括构建包含里氏木霉调控基因72685的过表达载体的步骤。The method for improving the ability of Trichoderma reesei to express cellulase by regulating cell metabolism according to the present invention includes the step of constructing an overexpression vector comprising the Trichoderma reesei
根据本发明的根据本发明的通过调控细胞代谢提高里氏木霉表达纤维素酶能力的方法,将cDNA1启动子、72685基因、cDNA1终止子和pyr4表达盒无缝拼接方式串联拼接,得到过表达质粒。According to the method for improving the ability of Trichoderma reesei to express cellulase by regulating cell metabolism of the present invention, the cDNA1 promoter, the 72685 gene, the cDNA1 terminator and the pyr4 expression cassette are spliced in series in a seamless splicing manner to obtain an overexpression plasmid.
本发明将里氏木霉的磷酸戊糖途径的6-磷酸葡糖酸脱氢酶基因72685进行过表达,通过构建该基因的过表达质粒,并用其转化里氏木霉,提高了里氏木霉的蛋白表达量和纤维素酶酶活。In the present invention, the 6-
附图说明Description of drawings
图1为提高纤维素酶表达的72685过表达质粒图谱;Fig. 1 is the 72685 overexpression plasmid map that improves cellulase expression;
图2显示过表达72685菌株与SUS4-2菌株的胞外蛋白比较;Figure 2 shows the comparison of extracellular proteins of overexpressed 72685 strain and SUS4-2 strain;
图3显示过表达72685菌株与SUS4-2菌株的纤维素酶酶活比较;Figure 3 shows the comparison of the cellulase activity of the overexpressed 72685 strain and the SUS4-2 strain;
图4显示过表达72685菌株相关纤维素酶自身基因的转录丰度。Figure 4 shows the transcript abundance of the overexpressed 72685 strain-related cellulase self-genes.
具体实施方式Detailed ways
实施例1. 过表达调控基因72685质粒的构建Example 1. Construction of overexpression
构建过表达72685质粒:包括cDNA1启动子、72685基因、cDNA1终止子和pyr4表达盒质粒。以APA-GOD质粒为模板,扩增APA部分(AmpR-pyr4-AmpR),APA序列 (AmpR-pyr4-AmpR)包含了里氏木霉营养缺陷型筛选标记pyr4的表达盒,该表达盒可以用于缺少pyr4基因的里氏木霉菌株的转化筛选。在pyr4表达盒两端有两个串联重复的氨苄青霉素基因,可以利用这种同向串联序列同源重组作用将里氏木霉转化子中的pyr4基因更快速的敲除去,使pyr4筛选标记可以循环使用。以里氏木霉基因组为模板,扩增CDNA1启动子、72685基因(命名为CDNA)和CDNA1终止子,电泳、回收的4个片段用同源重组的方法连接。转化大肠杆菌Trans1-T1感受态细胞,对平板上长出的大肠菌落做菌落PCR,将PCR鉴定为阳性的大肠菌落送测序,将测序正确的质粒命名为pCDNA1p-72685质粒, 如图1所示。Construction of
实施例2. 过表达72685质粒的导入Example 2. Introduction of
(1)过表达72685质粒转化里氏木霉SUS4-2(1)
将里氏木霉SUS4-2接种于土豆培养基(PDA)平板上,28 ºC静置培养7 d待其产孢,将孢子刮下并接种于100 ml含有尿嘧啶的PDB培养基中,28ºC、160 rpm振摇培养过夜。200目筛过滤收集萌发的菌丝,加入10 mg/ml的纤维素酶在30ºC消化2-3小时。收集原生质体后,pCDNAP-72685质粒用EcoRI酶切,转化里氏木霉宿主细胞。Trichoderma reesei SUS4-2 was inoculated on a potato culture medium (PDA) plate, and cultured at 28 ºC for 7 days until the spores were produced. The spores were scraped and inoculated into 100 ml of PDB medium containing uracil at 28 ºC. , 160 rpm shaking culture overnight. The germinated mycelia were collected by filtration through a 200-mesh sieve, and 10 mg/ml of cellulase was added to digest at 30ºC for 2-3 hours. After the protoplasts were collected, the pCDNAP-72685 plasmid was digested with EcoR I and transformed into T. reesei host cells.
(2) PCR验证pCDNAP-72685质粒在里氏木霉基因组的导入(2) PCR verification of the introduction of the pCDNAP-72685 plasmid into the Trichoderma reesei genome
挑取单个转化子,接种于含MM-葡萄糖培养基的24孔板,于28℃培养5-7天。提取基因组DNA,验证过表达72685质粒在里氏木霉基因组的导入。对能扩增出符合预期条带大小PCR产物的转化子,将其接种于PDA培养基上产孢。Pick a single transformant, inoculate it in a 24-well plate containing MM-glucose medium, and culture at 28°C for 5-7 days. Genomic DNA was extracted to verify the introduction of the
实施例3. 过表达72685对里氏木霉纤维素酶分泌表达的影响Example 3. The effect of overexpression of 72685 on the secretion and expression of Trichoderma reesei cellulase
(1)过表达72685基因的转化子的摇瓶诱导(1) Shake flask induction of transformants overexpressing the 72685 gene
过表达72685基因的转化子和出发菌株分别接种2×107孢子于50 ml MM-glucose培养基中,28℃、160 rpm培养2 天。以10%的接种量转接至50 ml MM+2% Avicel培养基中以诱导纤维素酶的表达。从第3天开始,每隔24 h取样,连续取样至7天。The transformants overexpressing the 72685 gene and the starting strain were respectively inoculated with 2×10 7 spores in 50 ml MM-glucose medium, and cultured at 28°C and 160 rpm for 2 days. 10% of the inoculum was transferred to 50 ml MM+2% Avicel medium to induce cellulase expression. From the 3rd day, samples were taken every 24 h, and the samples were continuously sampled for 7 days.
(2)过表达72685基因的转化子的蛋白浓度、纤维素酶的测定(2) Determination of protein concentration and cellulase of transformants overexpressing 72685 gene
蛋白定量用考马斯亮蓝法,加入250 L 1 × dye reagent染液和10 µl蛋白标品后,室温下反应10分钟后,测定595 nm的吸光值, 结果见图2。可见过表达72685基因的转化子在整个培养阶段,其分泌到胞外的蛋白浓度均高于出发菌株。Coomassie brilliant blue method was used for protein quantification. After adding 250 L of 1 × dye reagent and 10 µl of protein standard, and reacting at room temperature for 10 minutes, the absorbance at 595 nm was measured. The results are shown in Figure 2. It can be seen that the transformants expressing the 72685 gene have a higher protein concentration than the original strain during the whole culture stage.
纤维素酶的测定采用羧甲基纤维素钠(1.5 % CMC-Na)作为底物进行测定。用柠檬酸-磷酸氢二钠缓冲液(0.05 M、pH 5.0)配制。取适当稀释的酶液100 µl,加入到900 µlCMC-Na底物中,振荡混合均匀,50 ℃水浴保温30 min,反应终止时,向各试管中加入1.5 mlDNS试剂,在沸水中煮5 min,迅速冷却,测定540 nm的吸光度。1 ml液体酶,在50 ℃、pH 5.0的条件下,每小时水解羧甲基纤维素钠,产生1 μmol还原糖(以葡萄糖计)所需要的酶量定义为一个酶活力单位(U),结果见图3。可见过表达72685基因的转化子在整个培养阶段,其内切纤维素酶的酶活均高于出发菌株。SUS4-2在MM-Avicel中培养6天后,内切纤维素酶酶活为40.85 U/mL,而过表达72685菌株的纤维素酶酶活为57.56 U/mL,较原始菌株提高了0.40倍。因此,过表达72685基因能够提高纤维素酶的酶活。The determination of cellulase was carried out using sodium carboxymethylcellulose (1.5 % CMC-Na) as the substrate. Prepared in citric acid-disodium hydrogen phosphate buffer (0.05 M, pH 5.0). Take 100 µl of appropriately diluted enzyme solution, add it to 900 µl CMC-Na substrate, shake and mix evenly, incubate in a water bath at 50 °C for 30 min, when the reaction is terminated, add 1.5 ml of DNS reagent to each test tube, and boil in boiling water for 5 min. Cool quickly and measure the absorbance at 540 nm. 1 ml of liquid enzyme, at 50 ℃, pH 5.0, hydrolyzes sodium carboxymethylcellulose per hour to produce 1 μmol of reducing sugar (calculated as glucose) The amount of enzyme required is defined as one enzyme activity unit (U), The results are shown in Figure 3. It can be seen that the transformants expressing the 72685 gene have higher enzymatic activity of endocellulase than the original strain in the whole culture stage. After SUS4-2 was cultured in MM-Avicel for 6 days, the enzymatic activity of endo-cellulase was 40.85 U/mL, while that of the
实施例4. 过表达72685菌株相关纤维素酶及自身基因的转录丰度Example 4. Overexpression 72685 strain-related cellulase and transcriptional abundance of its own genes
提取72685过表达菌株和SUS4-2菌株在以微晶纤维素Avicel作为唯一碳源的培养基上进行诱导24 h后的RNA, 测定相关纤维素酶及自身基因的转录丰度(见图4)。可见,过表达72685之后,cbh1、cbh2、egl1、egl2和72685基因的转录水平都显著高于对照菌株。相关基因表达水平的检测实验中,每种样本设三个样品平行诱导培养,每个样品做3个荧光定量技术重复,内参基因选择actin,计算各个基因的转录水平变化的方法时采用 2-ΔΔCt方法。Extract the RNA of 72685 overexpressing strain and SUS4-2 strain after induction for 24 h on the medium with microcrystalline cellulose Avicel as the sole carbon source, and measure the transcriptional abundance of related cellulase and its own genes (see Figure 4). . It can be seen that after overexpression of 72685 , the transcription levels of cbh1 , cbh2 , egl1 , egl2 and 72685 genes were significantly higher than those of the control strain. In the detection experiment of the expression level of related genes, three samples were induced and cultured in parallel for each sample, and each sample was repeated three times by fluorescence quantitative technology. method.
以上实施例仅用于解释本申请的技术方案,不限定本申请的保护范围。The above embodiments are only used to explain the technical solutions of the present application, and do not limit the protection scope of the present application.
序列表 sequence listing
<110> 中国农业科学院北京畜牧兽医研究所<110> Beijing Institute of Animal Husbandry and Veterinary Medicine, Chinese Academy of Agricultural Sciences
<120> 一种通过调控细胞代谢提高里氏木霉表达纤维素酶能力的方法<120> A method for improving the ability of Trichoderma reesei to express cellulase by regulating cell metabolism
<160> 1<160> 1
<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0
<210> 1<210> 1
<211> 1649<211> 1649
<212> DNA<212> DNA
<213> 里氏木霉(Trichodermareesei)<213> Trichodermareesei
<400> 1<400> 1
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tcctcctctg ctgccgccca ggcttcaaac aatgctaaca atgttccaag cgcggatctg 120tcctcctctg ctgccgccca ggcttcaaac aatgctaaca atgttccaag cgcggatctg 120
ggcctcatcg gccttgctgt catgggacag aacctgatcc tcaacatggc tgacaacggc 180ggcctcatcg gccttgctgt catgggacag aacctgatcc tcaacatggc tgacaacggc 180
ttcaccatct gcgcctacaa ccgaaccgtt tccaaggtcg accacttcct ggagaacgag 240ttcaccatct gcgcctacaa ccgaaccgtt tccaaggtcg accacttcct ggagaacgag 240
gccaagggca agtctattgt cggcgcccac gacgacaagg agttcatcag caagctcaag 300gccaagggca agtctattgt cggcgcccac gacgacaagg agttcatcag caagctcaag 300
tcgccccgcc gcatcatgct cctcgtccag gctggcaagg ccgttgacga gtggattcag 360tcgccccgcc gcatcatgct cctcgtccag gctggcaagg ccgttgacga gtggattcag 360
cgactgctgc ccctcctcga cgagggcgac atcatcatcg acggtggcaa ctcccacttc 420cgactgctgc ccctcctcga cgagggcgac atcatcatcg acggtggcaa ctcccacttc 420
cccgactcca accgccgcac caaggagctc gccgccaaga agatccgatt cgtcggctcc 480cccgactcca accgccgcac caaggagctc gccgccaaga agatccgatt cgtcggctcc 480
ggtgtttccg gcggcgagga gggtgcccgc tacggccctt ctctgatgcc cggcggtaac 540ggtgtttccg gcggcgagga gggtgcccgc tacggccctt ctctgatgcc cggcggtaac 540
gaggaggcct ggccctacat caaggacatc ttccaggcca ttgccgccaa gagcgacggc 600gaggaggcct ggccctacat caaggacatc ttccaggcca ttgccgccaa gagcgacggc 600
gaggcctgct gcgagtgggt cggcgacgag ggtgctggtc actacgtcaa gatggtccac 660gaggcctgct gcgagtgggt cggcgacgag ggtgctggtc actacgtcaa gatggtccac 660
aacggtatcg agtacggtga catgcagctc atctgcgagg cttatgacat catgaagcgt 720aacggtatcg agtacggtga catgcagctc atctgcgagg cttatgacat catgaagcgt 720
ggcctcggtc tctccagcaa ggagatcggt gacgtctttg ctaagtggaa caagggcgtt 780ggcctcggtc tctccagcaa ggagatcggt gacgtctttg ctaagtggaa caagggcgtt 780
ttggactcct tcctgatcga gatcacccgc gacatcctct acttcaacga cgacgatggc 840ttggactcct tcctgatcga gatcacccgc gacatcctct acttcaacga cgacgatggc 840
actcctttgg tcgacaagat cctggacaag gccggccaga agggaaccgg caagtggacc 900actcctttgg tcgacaagat cctggacaag gccggccaga agggaaccgg caagtggacc 900
gccatcaacg ccctcgacct cggcatgccc gtcaccctca tcgccgaggc cgtcctggcc 960gccatcaacg ccctcgacct cggcatgccc gtcaccctca tcgccgaggc cgtcctggcc 960
cgatgcttgt ccggcatcaa ggacgagcgt gccctggcct ccaccaagct ccgctatgtc 1020cgatgcttgt ccggcatcaa ggacgagcgt gccctggcct ccaccaagct ccgctatgtc 1020
gcccgtggca gcggcaagtt cgagggcaac aaggagcagt tcctcgagga tctcgagcag 1080gcccgtggca gcggcaagtt cgagggcaac aaggagcagt tcctcgagga tctcgagcag 1080
gctctgtacg cctccaagat catctcctac gcccagggct tcatgctcat gcaggaggct 1140gctctgtacg cctccaagat catctcctac gcccagggct tcatgctcat gcaggaggct 1140
gcccgcgagt tcaactggaa gctcaacaag ccctccatcg ccctcatgtg gcgcggtggc 1200gcccgcgagt tcaactggaa gctcaacaag ccctccatcg ccctcatgtg gcgcggtggc 1200
tgcatcatcc gctccgtctt cctcaaggac atcacctctg cttaccgcaa cgagcccgag 1260tgcatcatcc gctccgtctt cctcaaggac atcacctctg cttaccgcaa cgagcccgag 1260
ctgaagaacc tgctcttcga caacttcttc aacgacgcca tccacaaggc ccagcccggc 1320ctgaagaacc tgctcttcga caacttcttc aacgacgcca tccacaaggc ccagcccggc 1320
tggagagccg tcgtcgccca ggccgccgag ctgggtatcc ccactcccgc cttcagcacc 1380tggagagccg tcgtcgccca ggccgccgag ctgggtatcc ccactcccgc cttcagcacc 1380
gccctgtcgt ggttcgacgg ctaccgcacc aaggacctcc ccgccaacct gctgcaggcc 1440gccctgtcgt ggttcgacgg ctaccgcacc aaggacctcc ccgccaacct gctgcaggcc 1440
cagcgtgact actttggcgc ccacactttc cacatcaagc ccgagtttgc ctcagacaag 1500cagcgtgact actttggcgc ccacactttc cacatcaagc ccgagtttgc ctcagacaag 1500
taccccgagg gcaaggacat ccacgtcaac tggaccggcc gtggcggtaa cgtctccgcc 1560taccccgagg gcaaggacat ccacgtcaac tggaccggcc gtggcggtaa cgtctccgcc 1560
tcaacgtacc aggcataaag ctgcttggct agaaaaggtc ggaggagaat cagtcaaagt 1620tcaacgtacc aggcataaag ctgcttggct agaaaaggtc ggaggagaat cagtcaaagt 1620
tgggtatgaa tagcaatgat aatgttaca 1649tgggtatgaa tagcaatgat aatgttaca 1649
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