CN113913395B - Artificial recombinant H5N8 influenza virus, and preparation method and application thereof - Google Patents
Artificial recombinant H5N8 influenza virus, and preparation method and application thereof Download PDFInfo
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Abstract
Description
技术领域technical field
本发明涉及反向遗传学技术和动物传染病技术领域,具体涉及一种人工重组并致弱的H5N8亚型重组流感病毒及其制备方法和应用。The invention relates to the technical field of reverse genetics technology and animal infectious diseases, in particular to an artificially recombined and weakened H5N8 subtype recombinant influenza virus and a preparation method and application thereof.
背景技术Background technique
禽流感病毒(avian influenza virus,AIV)是一种能广泛感染禽类和哺乳动物的分节段的负链RNA病毒。根据病毒的表面蛋白,AIV被分为16个血凝素(HA)和9个神经氨酸酶(NA)亚型。其中,H5和H7亚型AIV可在家禽或野鸟中引起疫情,导致重大经济损失,也可感染人类,引起公共卫生危害。中国研制出一系列全病毒灭活苗,成功控制了2004年以来的H5N1和2017年以来H7N9亚型禽流感。Avian influenza virus (AIV) is a segmented negative-strand RNA virus that can broadly infect birds and mammals. AIV is classified into 16 hemagglutinin (HA) and 9 neuraminidase (NA) subtypes based on the surface proteins of the virus. Among them, H5 and H7 subtypes of AIV can cause outbreaks in poultry or wild birds, resulting in significant economic losses, and can also infect humans and cause public health hazards. China has developed a series of whole virus inactivated vaccines, which have successfully controlled H5N1 since 2004 and H7N9 subtype avian influenza since 2017.
为应对我国可能出现的家禽H5N8疫情和公共卫生危害,本发明进行了人工重组的H5N8禽流感疫苗株的研制。In order to deal with the possible occurrence of poultry H5N8 epidemic situation and public health hazards in my country, the present invention conducts the development of artificially recombined H5N8 avian influenza vaccine strains.
理想的流感病毒疫苗株应具备与流行株良好的抗原匹配性,对鸡胚无致病力及鸡胚高滴度生长性等条件。然而,很难从自然界分离具备上述条件的流感毒株作为疫苗株。The ideal influenza virus vaccine strain should have good antigenic matching with the circulating strain, no pathogenicity to chicken embryos and high titer growth of chicken embryos. However, it is difficult to isolate influenza strains having the above conditions as vaccine strains from nature.
发明内容SUMMARY OF THE INVENTION
本发明所要解决的技术问题为:提供一种人工重组的H5N8流感病毒及其制备方法和应用。The technical problem to be solved by the present invention is to provide an artificially reconstituted H5N8 influenza virus and a preparation method and application thereof.
本发明的技术方案为:重组的H5N8禽流感病毒,以高致病性H5N8亚型禽流感病毒A/swan/Shanxi/4-1/2020(H5N8)为表面抗原血凝素(HA)和神经氨酸酶(NA)基因供体,但HA裂解位点具有典型低致病性禽流感病毒分子特征(-RETR-);以流感病毒鸡胚高滴度适应株A/PR/8/34(H1N1)的PB2,PB1,PA,NP,M和NS基因为6个内部基因的供体,通过反向遗传操作方法,人工重组得到了1株重组的H5N8禽流感病毒,命名为A型流感病毒A/Harbin/H5-Re14/2021(H5N8)(简称为H5-Re14株),保藏于中国典型培养物保藏中心,地址在中国武汉的武汉大学,其保藏号为CCTCC NO:V202160,保藏时间为2021年8月3日。The technical scheme of the present invention is as follows: the recombinant H5N8 avian influenza virus uses the highly pathogenic H5N8 subtype avian influenza virus A/swan/Shanxi/4-1/2020 (H5N8) as the surface antigen hemagglutinin (HA) and neural Aidase (NA) gene donor, but the HA cleavage site has the typical molecular characteristics of low pathogenic avian influenza virus (-RETR-); adapted to the high titer of influenza virus chicken embryo strain A/PR/8/34 ( The PB2, PB1, PA, NP, M and NS genes of H1N1) are the donors of 6 internal genes. Through reverse genetic manipulation, a recombinant H5N8 avian influenza virus was obtained by artificial recombination, which was named as influenza A virus A/Harbin/H5-Re14/2021 (H5N8) (referred to as H5-Re14 strain), deposited in the China Center for Type Culture Collection, located in Wuhan University, Wuhan, China, its deposit number is CCTCC NO: V202160, and the preservation time is August 3, 2021.
本发明选用流感病毒的可在鸡胚内生长至很高滴度的实验室鸡胚适应株A/PR/8/34(H1N1)的6个内部基因作为骨架基因,并选用2020年分离得到的高致病性禽流感病毒株A/swan/Shanxi/4-1/2020(H5N8)的HA和NA基因作为表面基因,利用反向遗传学人工构建方法,制备了致弱的重组病毒H5-Re14株,该重组毒株将可作为H5N8流感的疫苗株。The present invention selects 6 internal genes of the laboratory chicken embryo-adapted strain A/PR/8/34 (H1N1) of influenza virus that can grow to a very high titer in chicken embryos as backbone genes, and selects the 6 internal genes isolated in 2020. The HA and NA genes of the highly pathogenic avian influenza virus strain A/swan/Shanxi/4-1/2020 (H5N8) were used as surface genes, and the attenuated recombinant virus H5-Re14 was prepared by artificial construction method using reverse genetics The recombinant strain will be used as a vaccine strain for H5N8 influenza.
实验证实,H5-Re14株病毒与我国H5N8禽流感病毒流行株A/swan/Shanxi/4-1/2020(H5N8)抗原性一致,制备疫苗免疫鸡后将对H5N8流感病毒流行株A/swan/Shanxi/4-1/2020(H5N8)的攻击产生良好的特异保护效果。该病毒含有流感病毒鸡胚高滴度适应株A/PR/8/34(H1N1)的6个内部基因,因此具有良好的鸡胚适应性,病毒生长滴度与野毒相比,可提高9倍以上;以此为疫苗株生产疫苗,可大大降低疫苗生产成本,提高疫苗质量。Experiments have confirmed that the H5-Re14 strain virus has the same antigenicity as the H5N8 avian influenza virus strain A/swan/Shanxi/4-1/2020 (H5N8) in China. The attack of Shanxi/4-1/2020 (H5N8) produces a good specific protection effect. The virus contains 6 internal genes of the high-titer influenza virus-adapted strain A/PR/8/34 (H1N1), so it has good chicken embryo adaptability, and the virus growth titer can be increased by 9 times compared with the wild virus The above; using this as a vaccine strain to produce a vaccine can greatly reduce the cost of vaccine production and improve the quality of the vaccine.
进一步地,本发明还提出了所述的重组的H5N8禽流感病毒(H5-Re14株)在制备预防H5N8流感病毒所导致疾病的药物中的应用。Further, the present invention also proposes the application of the recombinant H5N8 avian influenza virus (H5-Re14 strain) in preparing a medicine for preventing diseases caused by the H5N8 influenza virus.
进一步地,所述H5N8流感病毒为A/swan/Shanxi/4-1/2020(H5N8)毒株。Further, the H5N8 influenza virus is the A/swan/Shanxi/4-1/2020 (H5N8) strain.
更进一步地,本发明还提出了一种构建所述的重组H5N8禽流感病毒的方法,该方法包括:Further, the present invention also proposes a method for constructing the described recombinant H5N8 avian influenza virus, the method comprising:
(1)使用HA基因特异性扩增和突变引物,利用RT-PCR方法,扩增出高致病性H5N8亚型禽流感病毒A/swan/Shanxi/4-1/2020(H5N8)的HA1和HA2基因片段,在扩增HA1片段的同时将HA基因裂解位点氨基酸由-REKRRKR-突变为-RETR-,使其由高致病性禽流感病毒分子特征突变为典型低致病性禽流感病毒分子特征;再利用重叠延伸反应,扩增出裂解位点为典型低致病性流感病毒分子特征的HA片段,插入pBD质粒,构建重组HA基因双向转录载体;(1) Using HA gene-specific amplification and mutation primers, RT-PCR method was used to amplify the HA1 and HA2 gene fragment, while amplifying the HA1 fragment, mutates the amino acid at the cleavage site of the HA gene from -REKRRKR- to -RETR-, making it mutated from the molecular characteristics of highly pathogenic avian influenza virus to a typical low pathogenic avian influenza virus. Molecular characteristics; then use the overlap extension reaction to amplify the HA fragment whose cleavage site is the molecular characteristics of typical low pathogenic influenza virus, insert it into the pBD plasmid, and construct the bidirectional transcription vector of the recombinant HA gene;
(2)利用RT-PCR方法,扩增出H5N8亚型禽流感病毒A/swan/Shanxi/4-1/2020(H5N8)的NA基因全基因片段,插入pBD质粒,构建重组NA基因双向转录载体;(2) Using RT-PCR method, amplify the NA gene whole gene fragment of H5N8 subtype avian influenza virus A/swan/Shanxi/4-1/2020 (H5N8), insert into pBD plasmid, construct recombinant NA gene bidirectional transcription vector ;
(3)将(1)、(2)所述构建的HA、NA基因2个重组pBD双向转录载体质粒和含有流感病毒鸡胚高滴度适应株A/PR/8/34(H1N1)的PB2、PB1、PA、NP、M、NS基因的6个pBD双向转录载体质粒混合,并与转染试剂一起接种293T细胞,将培养后收获的细胞及上清接种鸡胚,获得具有HA活性的H5N8禽流感rH5N8-2/6重组病毒株。得到的重组病毒HA和NA来自于高致病性H5N8流感病毒国内分离株A/swan/Shanxi/4-1/2020(H5N8),但HA裂解位点呈典型低致病性禽流感病毒分子特征(-RETR-),6个内部基因PB2、PB1、PA、NP、M及NS来自流感病毒鸡胚高滴度适应株A/PR/8/34(H1N1)。(3) Two recombinant pBD bidirectional transcription vector plasmids of HA and NA genes constructed as described in (1) and (2) and PB2 containing influenza virus chicken embryo high titer adaptation strain A/PR/8/34 (H1N1) , 6 pBD bidirectional transcription vector plasmids of PB1, PA, NP, M, NS genes are mixed, and inoculated with 293T cells together with transfection reagent, and the cells and supernatant harvested after culture are inoculated into chicken embryos to obtain H5N8 with HA activity Avian influenza rH5N8-2/6 recombinant virus strain. The obtained recombinant virus HA and NA are from the highly pathogenic H5N8 influenza virus domestic isolate A/swan/Shanxi/4-1/2020 (H5N8), but the HA cleavage site is typical of low pathogenic avian influenza virus molecular characteristics (-RETR-), 6 internal genes PB2, PB1, PA, NP, M and NS are derived from the high titer-adapted strain A/PR/8/34 (H1N1) of influenza virus in chicken embryos.
进一步地,扩增HA1基因的引物对如SEQ ID No.9和SEQ ID No.10所示,其中SEQID No.10为HA裂解位点的突变引物;扩增HA2基因的引物对如SEQ ID No.11和SEQ IDNo.12所示。Further, the primer pair for amplifying the HA1 gene is shown in SEQ ID No. 9 and SEQ ID No. 10, wherein SEQ ID No. 10 is the mutation primer of the HA cleavage site; the primer pair for amplifying the HA2 gene is as shown in SEQ ID No. 11 and SEQ ID No. 12.
与现有技术相比,本发明具有以下有益效果:Compared with the prior art, the present invention has the following beneficial effects:
1、H5-Re14与我国H5N8禽流感病毒流行株A/swan/Shanxi/4-1/2020(H5N8)抗原性一致,制备疫苗免疫鸡后将对H5N8流感病毒流行株A/swan/Shanxi/4-1/2020(H5N8)的攻击产生良好的特异保护效果。该病毒含有流感病毒鸡胚高滴度适应株A/PR/8/34(H1N1)的6个内部基因,因此具有良好的鸡胚适应性,病毒生长滴度与野毒相比,可提高9倍以上;以此为疫苗株生产疫苗,可大大降低疫苗生产成本,提高疫苗质量。1. H5-Re14 has the same antigenicity as my country's H5N8 avian influenza virus strain A/swan/Shanxi/4-1/2020 (H5N8). -1/2020 (H5N8) attack produces good specific protection. The virus contains 6 internal genes of the high-titer influenza virus-adapted strain A/PR/8/34 (H1N1), so it has good chicken embryo adaptability, and the virus growth titer can be increased by 9 times compared with the wild virus The above; using this as a vaccine strain to produce a vaccine can greatly reduce the cost of vaccine production and improve the quality of the vaccine.
2、通过对HA基因裂解位点人工修饰,H5-Re14株病毒具有典型低致病性流感病毒的分子特征,H5-Re14株重组病毒对鸡胚和鸡均无致病性,生物安全性高。2. By artificially modifying the cleavage site of the HA gene, the H5-Re14 strain virus has the molecular characteristics of a typical low pathogenic influenza virus. The H5-Re14 strain recombinant virus has no pathogenicity to chicken embryos and chickens, and has high biological safety. .
附图说明Description of drawings
图1为RT-PCR扩增基因的凝胶电泳图,图中A为以A/swan/Shanxi/4-1/2020(H5N8)毒株cDNA为模板,RT-PCR扩增的HA1、HA2、HA和NA基因片段,分别为第1~4泳道,M为DNAMarker 2000;B为以重组H5N8病毒的cDNA为模板,RT-PCR扩增的重组病毒8个基因片段,第1至第8泳道分别为HA、NA、PB2、PB1、PA、NP、M、NS基因片段,M为DNA Marker 2000。Fig. 1 is the gel electrophoresis image of the gene amplified by RT-PCR. In the figure, A is the cDNA of A/swan/Shanxi/4-1/2020 (H5N8) strain as the template. HA and NA gene fragments, lanes 1 to 4, respectively, M is DNAMarker 2000; B is the 8 gene fragments of recombinant virus amplified by RT-PCR using the cDNA of recombinant H5N8 virus as a template, lanes 1 to 8 are respectively For HA, NA, PB2, PB1, PA, NP, M, NS gene fragments, M is DNA Marker 2000.
图2为H5-Re14病毒HA基因裂解位点区域突变前后序列。Figure 2 shows the sequence before and after mutation of the HA gene cleavage site region of the H5-Re14 virus.
图3为重组H5-Re14病毒和野生型H5N8流感病毒A/swan/Shanxi/4-1/2020(H5N8)的生长曲线。Figure 3 is a growth curve of recombinant H5-Re14 virus and wild-type H5N8 influenza virus A/swan/Shanxi/4-1/2020 (H5N8).
具体实施方式Detailed ways
下述实施例中的实验方法,如无特殊说明,均为常规方法。下述实施例中所用的试验材料,如无特殊说明,均为从商业渠道购买得到的。The experimental methods in the following examples are conventional methods unless otherwise specified. The test materials used in the following examples were purchased from commercial channels unless otherwise specified.
实验材料Experimental Materials
1.病毒株1. Virus strain
A/swan/Shanxi/4-1/2020(H5N8)(简称SW/SX/4-1/20)为2020年在我国山西病死天鹅中分离得到,由中国农业科学院哈尔滨兽医研究所国家禽流感参考实验室分离、鉴定和保存,该毒株记载文献:“现用重组禽流感病毒(H5+H7)三价灭活疫苗对近期H5和H7病毒抗原变异株的免疫效力研究”,刘艳晶等,《中国预防兽医学报》,2021年9月知网在线发表。申请人保证从申请日起二十年内可开放提供该生物材料。A/swan/Shanxi/4-1/2020 (H5N8) (SW/SX/4-1/20 for short) was isolated from sick and dead swans in Shanxi, my country in 2020. Laboratory isolation, identification and preservation, the strain is recorded in the document: "Research on the immune efficacy of the current recombinant avian influenza virus (H5+H7) trivalent inactivated vaccine on recent H5 and H7 virus antigenic variants", Liu Yanjing et al., " Chinese Journal of Preventive Veterinary Medicine, published online by CNKI in September 2021. The applicant guarantees that the biological material will be available within 20 years from the filing date.
2.SPF鸡胚及细胞2. SPF chicken embryos and cells
SPF鸡胚和SPF鸡,购自中国农业科学院哈尔滨兽医研究所/国家禽类实验动物资源库,293T细胞(人胚肾细胞,SCSP-502)购自中国科学院典型培养物保藏委员会细胞库。SPF chicken embryos and SPF chickens were purchased from Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences/National Avian Laboratory Animal Resource Bank, and 293T cells (human embryonic kidney cells, SCSP-502) were purchased from the Cell Bank of the Type Culture Collection, Chinese Academy of Sciences.
3.质粒载体3. Plasmid vectors
pBD载体(Zejun Li,Hualan Chen,Peirong Jiao,Guohua Deng,Guobin Tian,Yanbing Li,Erich Hoffmann,Robert G.Webster,Yumiko Matsuoka,and KangzhenYu.Molecular Basis of Replication of Duck H5N1 Influenza Viruses in aMammalian Mouse Model.J.Virol.2005,79:12058-12064)由陈化兰研究员构建,将单向转录质粒载体pPolIsapIRib中包含聚合酶I启动子-SapI克隆位点-鼠源核酶序列的XbaI酶切片段,反向插入pCI(Promega)质粒的XbaI位点,形成RNA聚合酶II启动子(CMV)→病毒RNA转录终止信号序列Rib→流感病毒基因组cDNA(5’→3’)→人RNA聚合酶I启动子→mRNA转录终止PolyA信号序列(SV40)构成的双向转录表达质粒载体,利用该载体可同时转录出流感病毒负链vRNA和正链mRNA。插入A/PR/8/34(H1N1)毒株PB2,PB1,PA,NP,M和NS等6个内部基因的pBD-PB2、pBD-PB1、pBD-PA、pBD-NP、pBD-M和pBD-NS载体由中国农业科学院哈尔滨兽医研究所国家禽流感参考实验室鉴定和保存(Guobin Tian,Suhua Zhang,Yanbing Li,ZhigaoBu,Peihong Liu,Jiyong Zhou,Chengjun Li,Jianzhong Shi,Kangzhen Yu,HualanChen.Protective efficacy in chickens,geese and ducks of an H5N1 inactivatedvaccine developed by reverse genetics.Virology,2005,341:153-162)。pBD vectors (Zejun Li, Hualan Chen, Peirong Jiao, Guohua Deng, Guobin Tian, Yanbing Li, Erich Hoffmann, Robert G. Webster, Yumiko Matsuoka, and Kangzhen Yu. Molecular Basis of Replication of Duck H5N1 Influenza Viruses in aMammalian Mouse Model.J .Virol.2005, 79:12058-12064) was constructed by researcher Chen Hualan, and the unidirectional transcription plasmid vector pPolIsapIRib contains the polymerase I promoter-SapI cloning site-The XbaI restriction fragment of the mouse ribozyme sequence was inserted in reverse. The XbaI site of pCI (Promega) plasmid forms RNA polymerase II promoter (CMV) → viral RNA transcription termination signal sequence Rib → influenza virus genome cDNA (5'→3') → human RNA polymerase I promoter → mRNA The bidirectional transcription expression plasmid vector composed of the transcription termination PolyA signal sequence (SV40) can be used to simultaneously transcribe the negative strand vRNA and the positive strand mRNA of influenza virus. pBD-PB2, pBD-PB1, pBD-PA, pBD-NP, pBD-M and pBD-PB2, pBD-PB1, pBD-PA, pBD-NP, pBD-M and The pBD-NS vector was identified and preserved by the National Avian Influenza Reference Laboratory of Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences (Guobin Tian, Suhua Zhang, Yanbing Li, ZhigaoBu, Peihong Liu, Jiyong Zhou, Chengjun Li, Jianzhong Shi, Kangzhen Yu, Hualan Chen. Protective efficacy in chickens, geese and ducks of an H5N1 inactivatedvaccine developed by reverse genetics. Virology, 2005, 341:153-162).
4.主要试剂4. Main reagents
病毒RNA提取试剂盒购自北京天根生化科技有限公司;反转录试剂盒(ReverTraAce RT Kit)购自日本Toyobo公司;Ex-taq酶购自Takara公司;PCR产物纯化试剂盒(CYCLE-PURE-KIT)购自Omega公司;胶回收试剂盒(Wizard SV Gel and PCR Clean-Up System)购自Promega公司;测序试剂盒(ABI BigDye Terminator v3.1)购自美国Thermo Fisher公司;质粒提取试剂盒(QIAGEN Plasmid Midi Kit)购自QIAGEN公司。Viral RNA extraction kit was purchased from Beijing Tiangen Biochemical Technology Co., Ltd.; Reverse Transcription Kit (ReverTraAce RT Kit) was purchased from Japan Toyobo Company; Ex-taq enzyme was purchased from Takara Company; PCR product purification kit (CYCLE-PURE- KIT) was purchased from Omega Company; Gel Recovery Kit (Wizard SV Gel and PCR Clean-Up System) was purchased from Promega Company; Sequencing Kit (ABI BigDye Terminator v3.1) was purchased from American Thermo Fisher Company; Plasmid Extraction Kit ( QIAGEN Plasmid Midi Kit) was purchased from QIAGEN Company.
5.引物5. Primers
分析比较,设计合成H5N8流感分离株SW/SX/4-1/20(H5N8)HA1、HA2和NA基因的特异性引物,合成引物序列见表1。For analysis and comparison, specific primers for the HA1, HA2 and NA genes of the H5N8 influenza isolate SW/SX/4-1/20 (H5N8) were designed and synthesized. The sequences of the synthetic primers are shown in Table 1.
表1 H5N8禽流感病毒SW/SX/4-1/20(H5N8)的HA和NA基因特异性引物序列Table 1 HA and NA gene-specific primer sequences of H5N8 avian influenza virus SW/SX/4-1/20 (H5N8)
分析比较,设计合成A/PR/8/34(H1N1)的PB2、PB1、PA、NP、M、NS基因的特异性引物,合成引物序列见表2。For analysis and comparison, specific primers for the PB2, PB1, PA, NP, M, and NS genes of A/PR/8/34 (H1N1) were designed and synthesized. The sequences of the synthetic primers are shown in Table 2.
表2流感病毒A/PR/8/34(H1N1)的6个内部基因片段的特异性引物序列Table 2 Specific primer sequences of 6 internal gene fragments of influenza virus A/PR/8/34 (H1N1)
实施例1:重组H5N8流感病毒H5-Re14的制备与鉴定Example 1: Preparation and identification of recombinant H5N8 influenza virus H5-Re14
1.重组病毒2个表面基因(HA和NA)的构建和鉴定:1. Construction and identification of two surface genes (HA and NA) of recombinant virus:
提取H5N8亚型高致病性禽流感分离株SW/SX/4-1/20(H5N8)的RNA,并将其反转录为cDNA,使用HA基因的HA1片段特异性引物(HA1-U:atg gag aac ata gta ctt ctt ctt g;HA1-L-:gcc ccg aac agg cct cta gtt tct ctt aga gga cta ttt ctg agc,其中HA1-L为突变HA裂解位点为低致病性病毒分子特征的引物)和HA2片段特异性引物(HA2-U:actaga ggc ctg ttc ggg gcg ata gca ggg t;HA2-L:tta aat gca aat tct gca ctg taac),利用RT-PCR方法,分别扩增出HA基因的HA1和HA2片段(图1中A),并在扩增HA1基因片段的同时对HA裂解位点进行致弱突变修饰;然后以HA1、HA2为模板,HA1-U/HA2-L为引物,用phusion高保真聚合酶进行重叠延伸反应(SOE-PCR),扩增出裂解位点呈典型低致病性禽流感病毒分子特征(-RETR-)的HA片段(图1中A)。并将其克隆于pBD载体中,构建成pBD-HA重组质粒。The RNA of the H5N8 subtype highly pathogenic avian influenza isolate SW/SX/4-1/20 (H5N8) was extracted and reverse transcribed into cDNA using HA1 fragment-specific primers for the HA gene (HA1-U: atg gag aac ata gta ctt ctt ctt g; HA1-L-: gcc ccg aac agg cct cta gtt tct ctt aga gga cta ttt ctg agc, where HA1-L is a mutant HA cleavage site that is characteristic of low pathogenic virus molecules primers) and HA2 fragment-specific primers (HA2-U: actaga ggc ctg ttc ggg gcg ata gca ggg t; HA2-L: tta aat gca aat tct gca ctg taac), using RT-PCR method to amplify the HA gene respectively HA1 and HA2 fragments (A in Figure 1), and at the same time amplify the HA1 gene fragment, the HA cleavage site is modified by weakening mutation; then HA1 and HA2 are used as templates, HA1-U/HA2-L Overlap extension reaction (SOE-PCR) was performed with phusion high-fidelity polymerase to amplify the HA fragment with the cleavage site typical of low pathogenic avian influenza virus (-RETR-) (Fig. 1, A). It was cloned into pBD vector and constructed into pBD-HA recombinant plasmid.
HA基因裂解位点的突变引物(HA1-L)根据HA基因多个连续碱性氨基酸位点的特异性序列设计,扩增后的HA基因裂解位点由-REKRRKR-突变为-RETR-,使其由高致病性禽流感病毒分子特征突变为典型低致病性禽流感病毒分子特征(图2)。The mutation primer (HA1-L) of HA gene cleavage site is designed according to the specific sequence of multiple consecutive basic amino acid sites of HA gene, and the amplified HA gene cleavage site is mutated from -REKRRKR- to -RETR-, so that It was mutated from the molecular features of highly pathogenic avian influenza viruses to the typical molecular features of low pathogenic avian influenza viruses (Figure 2).
再利用RT-PCR方法,扩增上述高致病性H5N8毒株的NA基因全长(图1中A),按上述方法插入pBD载体中,构建成pBD-NA重组质粒。Then, RT-PCR method was used to amplify the full length of the NA gene of the above-mentioned highly pathogenic H5N8 strain (A in Figure 1), and insert it into the pBD vector according to the above method to construct a pBD-NA recombinant plasmid.
2.重组病毒的拯救:2. Rescue of recombinant virus:
利用脂质体转染法,将上述HA、NA基因2个重组质粒和含有A/PR/8/34(H1N1)病毒内部基因的pBD-PB2、pBD-PB1、pBD-PA、pBD-NP、pBD-M、pBD-NS等6个重组质粒同时导入单层的293T细胞,48小时后收获细胞及上清,接种9~11日龄鸡胚尿囊腔,48小时后收获尿囊液并检测血凝(HA)活性。HA阳性样品即为救获的H5N8亚型低致病性重组病毒,将获得的重组病毒命名为A/Harbin/H5-Re14/2021(H5N8),株号为H5-Re14,保藏于位于中国武汉的武汉大学的中国典型培养物保藏中心,其保藏号为CCTCC NO:V202160。Using the lipofection method, the above two recombinant plasmids of HA and NA genes and pBD-PB2, pBD-PB1, pBD-PA, pBD-NP, pBD-PB2, pBD-PB1, pBD-PA, pBD-NP, Six recombinant plasmids including pBD-M and pBD-NS were simultaneously introduced into monolayer 293T cells. After 48 hours, the cells and supernatant were harvested and inoculated into the allantoic cavity of 9-11-day-old chicken embryos. After 48 hours, the allantoic fluid was harvested and detected. Hemagglutination (HA) activity. The HA positive sample is the rescued H5N8 subtype low pathogenic recombinant virus, and the obtained recombinant virus is named A/Harbin/H5-Re14/2021 (H5N8), the strain number is H5-Re14, and is preserved in Wuhan, China The Chinese Type Culture Collection of Wuhan University, whose deposit number is CCTCC NO: V202160.
3.重组病毒的序列鉴定3. Sequence Identification of Recombinant Viruses
提取重组病毒H5-Re14的RNA,利用RT-PCR方法,分别扩增出重组病毒H5-Re14全基因组的8个片段,对PCR产物进行核酸凝胶电泳(图1中B),胶回收后测定每一片段的特定序列。The RNA of the recombinant virus H5-Re14 was extracted, and 8 fragments of the whole genome of the recombinant virus H5-Re14 were amplified by RT-PCR method. The PCR products were subjected to nucleic acid gel electrophoresis (B in Figure 1), and the gel was recovered and determined The specific sequence of each fragment.
H5-Re14株HA基因序列如SEQ ID No.1所示,H5-Re14株NA基因序列如SEQ ID No.2所示,H5-Re14株PB2基因序列如SEQ ID No.3所示,H5-Re14株PB1基因序列如SEQ ID No.4所示,H5-Re14株PA基因序列如SEQ ID No.5所示,H5-Re14株NP基因序列如SEQ ID No.6所示,H5-Re14株M基因序列如SEQ ID No.7所示,H5-Re14株NS基因序列如SEQ ID No.8所示。The HA gene sequence of the H5-Re14 strain is shown in SEQ ID No.1, the NA gene sequence of the H5-Re14 strain is shown in SEQ ID No.2, the PB2 gene sequence of the H5-Re14 strain is shown in SEQ ID No.3, and the H5-Re14 strain PB2 gene sequence is shown in SEQ ID No.3. The PB1 gene sequence of the Re14 strain is shown in SEQ ID No.4, the PA gene sequence of the H5-Re14 strain is shown in SEQ ID No.5, the NP gene sequence of the H5-Re14 strain is shown in SEQ ID No.6, and the H5-Re14 strain is shown in SEQ ID No.6. The M gene sequence is shown in SEQ ID No. 7, and the NS gene sequence of the H5-Re14 strain is shown in SEQ ID No. 8.
利用DNAStar软件(DNAStar Lasergene V7.1),对测定的序列与野生毒株H5N8流感病毒国内分离株SW/SX/4-1/20(H5N8)和流感病毒A/PR/8/34(H1N1)的序列进行序列比较,发现重组病毒H5-Re14的HA和NA来自于高致病性H5N8流感病毒国内分离株SW/SX/4-1/20(H5N8),但HA裂解位点呈典型低致病性流感病毒分子特征(-RETR-);6个内部基因PB2、PB1、PA、NP、M及NS来自于鸡胚高度适应性的流感病毒A/PR/8/34(H1N1)。Using DNAStar software (DNAStar Lasergene V7.1), the determined sequences were compared with the domestic isolates of wild strain H5N8 influenza virus SW/SX/4-1/20 (H5N8) and influenza virus A/PR/8/34 (H1N1) The sequence of the recombinant virus H5-Re14 was compared, and it was found that the HA and NA of the recombinant virus H5-Re14 were derived from the highly pathogenic H5N8 influenza virus domestic isolate SW/SX/4-1/20 (H5N8), but the HA cleavage site showed a typical low pathogenicity. Molecular characterization of pathogenic influenza virus (-RETR-); 6 internal genes, PB2, PB1, PA, NP, M and NS, are derived from chicken embryo highly adaptive influenza virus A/PR/8/34 (H1N1).
4.重组病毒H5-Re14生长曲线的测定4. Determination of the growth curve of recombinant virus H5-Re14
禽流感疫苗常用鸡胚生产,要求疫苗株在接种的鸡胚中具有良好的生长特性。本研究进行H5-Re14株病毒在鸡胚中的生长特性研究。将亲本病毒H5N8流感病毒流行株SW/SX/4-1/20(H5N8)和重组病毒H5-Re14接种2组SPF鸡胚各20枚,在最适36℃条件下分别培养24、48、72和96小时,分别取上述培养不同时间的各5枚鸡胚进行血凝测定,检测亲本毒株SW/SX/4-1/20(H5N8)和重组病毒H5-Re14的生长曲线。Avian influenza vaccines are usually produced from chicken embryos, and the vaccine strains are required to have good growth characteristics in the inoculated chicken embryos. In this study, the growth characteristics of H5-Re14 strain virus in chicken embryos were studied. The parental virus H5N8 influenza virus strain SW/SX/4-1/20 (H5N8) and the recombinant virus H5-Re14 were inoculated with 20 SPF chicken embryos in each group, and were cultured at the optimum 36°C for 24, 48, and 72 and 96 hours, each 5 chicken embryos cultured at different times were taken for hemagglutination assay, and the growth curves of parental strain SW/SX/4-1/20 (H5N8) and recombinant virus H5-Re14 were detected.
从试验结果可以看出,在36℃培养条件下,重组病毒生长滴度(平均HA滴度最高为8.6log2,即1:388)较亲本H5N8流感病毒国内分离株SW/SX/4-1/20(H5N8)(平均HA滴度最高为5.4log2,即1:42.2)有明显提高,血凝效价高出9.19倍(图3)。这说明本发明制备出了一株高生长滴度的重组病毒,将为以后的疫苗批量生产带来巨大的经济利益。It can be seen from the test results that the growth titer of the recombinant virus (the average HA titer is up to 8.6log2, i.e. 1:388) is higher than that of the parental H5N8 influenza virus domestic isolate SW/SX/4-1/ 20(H5N8) (the highest average HA titer was 5.4log2, i.e. 1:42.2) had a significant increase, and the hemagglutination titer was 9.19 times higher (Fig. 3). This shows that the present invention has prepared a recombinant virus with high growth titer, which will bring huge economic benefits to the subsequent batch production of vaccines.
5.重组病毒H5-Re14的抗原性分析5. Antigenicity analysis of recombinant virus H5-Re14
抗原性是病毒是否可以作为疫苗株的关键指标。本研究将亲本H5N8流感病毒国内分离株SW/SX/4-1/20(H5N8)与人工重组的H5N8流感病毒灭活后制备油乳剂灭活疫苗,免疫SPF鸡制备抗血清,使用HI试验进行抗原性分析,HI试验方法参考高致病性禽流感诊断技术国家标准(GB)(GB/T118936-2020))。HI试验结果显示,亲本H5N8流感病毒国内分离株SW/SX/4-1/20(H5N8)与人工重组的H5N8流感病毒与对应血清之间的交叉HI滴度无差异,表明H5N8病毒重组为鸡胚适应性的H5-Re14株后,病毒依然保持着亲本毒株的抗原性(见表3)。Antigenicity is a key indicator of whether a virus can be used as a vaccine strain. In this study, the parental H5N8 influenza virus domestic isolate SW/SX/4-1/20 (H5N8) and the artificial recombinant H5N8 influenza virus were inactivated to prepare oil emulsion inactivated vaccine, and SPF chickens were immunized to prepare antiserum, which was tested by HI test. For antigenicity analysis, HI test method refers to the National Standard for Diagnostic Technology of Highly Pathogenic Avian Influenza (GB) (GB/T118936-2020)). The results of the HI test showed that there was no difference in the cross-HI titer between the parental H5N8 influenza virus domestic isolate SW/SX/4-1/20 (H5N8) and the artificially reconstituted H5N8 influenza virus and the corresponding serum, indicating that the H5N8 virus was recombined into chicken After the embryo-adapted H5-Re14 strain, the virus retained the antigenicity of the parental strain (see Table 3).
表3:亲本毒株SW/SX/4-1/20(H5N8)与重组病毒H5-Re14株的抗原性分析Table 3: Antigenicity analysis of parental strain SW/SX/4-1/20 (H5N8) and recombinant virus H5-Re14 strain
6.重组病毒H5-Re14株对鸡胚和鸡的致病力试验6. The virulence test of recombinant virus H5-Re14 strain on chicken embryos and chickens
疫苗毒株的低致病性是具有生物安全性的前提条件。9~11日龄SPF鸡胚和4~8周龄SFP鸡经常作为禽流感病毒致病性评估模型。Low pathogenicity of vaccine strains is a prerequisite for biosafety. 9-11-day-old SPF chicken embryos and 4-8 week-old SFP chickens are often used as models for the pathogenicity assessment of avian influenza viruses.
为了解重组毒株的致病性,本发明首先使用SPF鸡胚进行病毒致病性的评估。9日龄的SPF鸡胚(购自中国农业科学院哈尔滨兽医研究所/国家禽类实验动物资源库)20枚,随机分为2组,每组10枚,第一组通过尿囊腔接种10-4倍稀释的重组H5-Re14株病毒液,第二组通过尿囊腔接种10-4倍稀释的亲本毒株SW/SX/4-1/20(H5N8)的病毒液。接种后72小时内观察和记录鸡胚死亡情况。In order to understand the pathogenicity of the recombinant strain, the present invention firstly uses SPF chicken embryos to evaluate the pathogenicity of the virus. 9-day-old SPF chicken embryos (purchased from Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences/National Avian Laboratory Animal Resource Bank) were randomly divided into 2 groups of 10 embryos. The first group was inoculated with 10-4 The virus fluid of recombinant H5-Re14 strain was diluted 10 times, and the second group was inoculated with 10-4 times diluted virus fluid of parental strain SW/SX/4-1/20 (H5N8) through the allantoic cavity. The death of chicken embryos was observed and recorded within 72 hours after inoculation.
本发明同时使用SPF鸡进行病毒致病性和感染能力的评估。6周龄的SPF鸡20只,随机分为2组,每组10只,将重组毒株H5-Re14和亲本毒株SW/SX/4-1/20(H5N8)尿囊液分别稀释10倍后,静脉途径接种6周龄SPF鸡,接种后每日观察发病死亡情况,连续观察10日,计算鸡静脉内接种致病指数(IVPI)。若IVPI大于1.2,则表明该毒株为高致病性毒株;若IVPI小于1.2,HA裂解位点为高致病性禽流感病毒分子特征,则为高致病性禽流感毒株;若IVPI小于1.2,HA裂解位点为低致病性流感病毒分子特征,则为低致病性禽流感毒株。The present invention simultaneously uses SPF chicken to evaluate the pathogenicity and infectivity of the virus. Twenty 6-week-old SPF chickens were randomly divided into 2 groups with 10 chickens in each group. Allantoic fluid of recombinant strain H5-Re14 and parental strain SW/SX/4-1/20(H5N8) were diluted 10 times respectively. After inoculation, 6-week-old SPF chickens were inoculated intravenously. Morbidity and mortality were observed every day after inoculation for 10 consecutive days, and the intravenous inoculation pathogenic index (IVPI) of chickens was calculated. If the IVPI is greater than 1.2, it indicates that the strain is a highly pathogenic strain; if the IVPI is less than 1.2, and the HA cleavage site is a molecular feature of a highly pathogenic avian influenza virus, it is a highly pathogenic avian influenza strain; if If the IVPI is less than 1.2, and the HA cleavage site is a molecular feature of low pathogenic influenza virus, it is a low pathogenic avian influenza strain.
6周龄的SPF鸡20只,随机分为2组,每组10只,将重组毒株H5-Re14和亲本毒株SW/SX/4-1/20(H5N8)尿囊液分别稀释至106EID50/ml后,分别鼻腔途径接种6周龄SPF鸡各10只,0.1ml/只。接种后每日观察发病死亡情况,连续观察14日,同时采集喉头和泄殖腔拭子进行病毒滴定,评估病毒对鸡的感染能力。Twenty 6-week-old SPF chickens were randomly divided into 2 groups, 10 in each group. The recombinant strain H5-Re14 and parental strain SW/SX/4-1/20(H5N8) allantoic fluid were diluted to 10 After 6 EID 50 /ml, 10 6-week-old SPF chickens were inoculated by nasal route, 0.1ml/chicken. After inoculation, the morbidity and mortality were observed daily for 14 consecutive days. At the same time, throat and cloacal swabs were collected for virus titration to evaluate the ability of the virus to infect chickens.
所有的试验鸡均在拥有独立通风系统的负压隔离器里饲养,所有涉及H5N8高致病性病毒的试验均在生物安全三级实验室内进行。All test chickens were raised in negative pressure isolators with independent ventilation systems, and all experiments involving H5N8 highly pathogenic virus were carried out in a biosafety level 3 laboratory.
SPF鸡胚致病试验结果显示,接种亲本毒株SW/SX/4-1/20(H5N8)病毒液的鸡胚在接种后26~30小时内全部发病死亡,接种重组毒株H5-Re14株病毒液的所有鸡胚在接种后72小时内均全部存活,表明H5-Re14株重组病毒对鸡胚无致病性。The results of the SPF chicken embryo pathogenic test showed that the chicken embryos inoculated with the parental virus strain SW/SX/4-1/20 (H5N8) virus liquid all died within 26 to 30 hours after inoculation, and the recombinant virus strain H5-Re14 strain was inoculated. All chicken embryos in the virus solution survived within 72 hours after inoculation, indicating that the recombinant virus of H5-Re14 strain is not pathogenic to chicken embryos.
SPF鸡静脉内接种致病指数(IVPI)测定试验结果显示,接种亲本毒株SW/SX/4-1/20(H5N8)病毒液的鸡在接种后1日内全部发病死亡,其IVPI为3.0;接种重组毒株H5-Re14株病毒液的所有鸡10日内均无任何不良反应发生,构建的H5-Re14株重组病毒IVPI为0(见表4)。表明H5-Re14株重组病毒为低致病性毒株,对鸡无致病性。The test results of intravenous inoculation pathogenic index (IVPI) of SPF chickens showed that all chickens inoculated with the parental strain SW/SX/4-1/20 (H5N8) virus liquid became morbid and died within 1 day after inoculation, and their IVPI was 3.0; All chickens inoculated with the recombinant virus strain H5-Re14 strain did not have any adverse reactions within 10 days, and the constructed H5-Re14 strain recombinant virus had an IVPI of 0 (see Table 4). It shows that the recombinant virus of H5-Re14 strain is a low pathogenic strain and has no pathogenicity to chickens.
SPF鸡鼻腔感染试验结果显示,鼻腔接种亲本毒株SW/SX/4-1/20(H5N8)病毒液的所有鸡在接种后2~3日内全部发病死亡;而鼻腔接种重组毒株H5-Re14株病毒液的所有鸡在14日观察期内均无任何不良反应发生;感染SW/SX/4-1/20(H5N8)病毒死亡的所有鸡喉头和泄殖腔拭子病毒检测均呈阳性,而感染H5-Re14株重组病毒的鸡在3日和5日拭子样品病毒检测均为阴性,表明H5-Re14株重组病毒为对鸡无感染和致病能力(见表4)。The results of the nasal infection test of SPF chickens showed that all chickens inoculated with the parental strain SW/SX/4-1/20 (H5N8) virus liquid in the nasal cavity died within 2 to 3 days after inoculation; All chickens with the virus strain had no adverse reactions during the 14-day observation period; all chickens infected with SW/SX/4-1/20 (H5N8) virus died of virus detection in throat and cloacal swabs were positive, while infected The swab samples of chickens with H5-Re14 strain were negative for virus detection on the 3rd and 5th day, indicating that the H5-Re14 strain recombinant virus had no ability to infect and cause chickens (see Table 4).
以上结果表明,H5-Re14株重组病毒对鸡胚和鸡均无致病性,生物安全性高。The above results show that the recombinant virus of H5-Re14 strain has no pathogenicity to chicken embryos and chickens, and has high biological safety.
表4 H5-Re14株重组病毒的致病性和感染能力测定Table 4 Determination of pathogenicity and infectivity of H5-Re14 strain recombinant virus
*该组鸡在攻毒后2~3日内全部发病死亡,所有死亡鸡均排毒均计入攻毒后3日排毒结果;/该组鸡在攻毒后5日无存活。*All chickens in this group became ill and died within 2-3 days after challenge, and all dead chickens were detoxified and counted in the results of detoxification on 3 days after challenge; / There was no survival of chickens in this group on 5 days after challenge.
7.重组病毒H5-Re14株的免疫原性评估7. Immunogenicity assessment of recombinant virus H5-Re14 strain
将HA价为8log2的重组病毒H5-Re14株以0.2%甲醛灭活后,以美国sornneborn品牌-40(Lytol)白油为佐剂制备油乳剂灭活疫苗,以10只3周龄的SPF鸡为模型动物,0.3ml/只肌肉注射免疫,同时设10只不免疫对照鸡。免疫后21日检测所有鸡血清中HI抗体滴度,同时以100CLD50(CLD50为鸡半数致死量)的剂量攻击SW/SX/4-1/20(H5N8)强毒,攻毒后观察14日,观察存活情况,并在攻毒后3日和5日采集喉头和泄殖腔拭子,接种鸡胚检测排毒情况。死亡鸡拭子样品随时采集。The recombinant virus H5-Re14 strain with an HA value of 8log2 was inactivated with 0.2% formaldehyde, and an oil-emulsion inactivated vaccine was prepared with American sornneborn brand-40 (Lytol) white oil as an adjuvant. Ten 3-week-old SPF chickens were used. For model animals, 0.3ml/injection was used for immunization, and 10 non-immunized control chickens were set at the same time. The HI antibody titers in the serum of all chickens were detected on the 21st day after immunization, and SW/SX/4-1/20 (H5N8) was challenged with a dose of 100CLD 50 (CLD50 is the median lethal dose of chickens), and observed for 14 days after the challenge , observe the survival situation, and collect throat and cloaca swabs on the 3rd and 5th days after the challenge, and inoculate chicken embryos to detect the detoxification situation. Swab samples of dead chickens were collected at any time.
结果显示,免疫21日时,免疫鸡血清中针对H5N8病毒的HI抗体滴度在7.0log2~9.0log2之间,平均滴度为8.0log2,对照鸡血清针对H5N8病毒的HI抗体滴度均<2.0log2(HI<2log2判定为HI抗体阴性);免疫后21日以鼻腔感染途径100LD50的剂量攻击H5N8亚型禽流感强毒后,所有免疫鸡健活,攻毒后3日和5日拭子样品病毒检测均为阴性;而对照鸡在攻毒后5日内全部发表死亡,而且死亡鸡喉头和泄殖腔拭子样品病毒分离结果均为阳性(见表5)。The results showed that on the 21st day of immunization, the HI antibody titer of the immunized chicken serum against H5N8 virus was between 7.0log2 and 9.0log2, and the average titer was 8.0log2. The HI antibody titer of the control chicken serum against H5N8 virus was less than 2.0. log2 (HI<2log2 is judged to be negative for HI antibody); 21 days after immunization, the virulent H5N8 subtype avian influenza was challenged with a dose of 100LD 50 via the nasal infection route. The virus detection of the samples were all negative; while the control chickens all died within 5 days after the challenge, and the virus isolation results of the throat and cloacal swab samples of the dead chickens were all positive (see Table 5).
表5 H5-Re14株重组病毒制备疫苗免疫鸡后HI抗体和攻毒后存活及排毒情况Table 5 H5-Re14 strain recombinant virus preparation vaccine HI antibody after immunization of chickens and survival and detoxification after challenge
*该组鸡在攻毒后2~4日内全部发病死亡,所有死亡鸡均检测排毒,排毒结果计入攻毒后3日排毒结果;/该组鸡在攻毒后5日无存活。*All chickens in this group died of disease within 2 to 4 days after challenge, all dead chickens were tested for detoxification, and the results of detoxification were included in the results of detoxification on the 3rd day after challenge; / The chickens in this group did not survive 5 days after challenge.
以上结果表明,人工重组H5N8流感病毒H5-Re14具有良好的免疫原性,能够预防H5N8亚型禽流感。The above results show that the artificial recombinant H5N8 influenza virus H5-Re14 has good immunogenicity and can prevent H5N8 subtype avian influenza.
序列表sequence listing
<110> 中国农业科学院哈尔滨兽医研究所(中国动物卫生与流行病学中心哈尔滨分中心)<110> Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences (Harbin Branch of China Center for Animal Health and Epidemiology)
<120> 人工重组的H5N8流感病毒及其制备方法和应用<120> Artificial recombinant H5N8 influenza virus and its preparation method and application
<160> 12<160> 12
<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0
<210> 1<210> 1
<211> 1695<211> 1695
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 1<400> 1
atggagaaca tagtacttct tcttgcaata gttagccttg ttaaaagtga tcagatttgc 60atggagaaca tagtacttct tcttgcaata gttagccttg ttaaaagtga tcagatttgc 60
attggttacc atgcaaacaa ttcgacagag caagttgaca cgataatgga aaagaacgtc 120attggttacc atgcaaacaa ttcgacagag caagttgaca cgataatgga aaagaacgtc 120
actgttacac atgcccaaga catactggaa aaaacacaca acgggaagct ctgtgatcta 180actgttacac atgcccaaga catactggaa aaaacacaca acgggaagct ctgtgatcta 180
aatggggtga agcctctgat tttaaaggat tgtagtgtag ctggatggct cctcggaaac 240aatggggtga agcctctgat tttaaaggat tgtagtgtag ctggatggct cctcggaaac 240
ccaatgtgcg acgaattcat cagagtgccg gaatggtcct acatagtgga gagggctaat 300ccaatgtgcg acgaattcat cagagtgccg gaatggtcct acatagtgga gagggctaat 300
ccagctaatg acctctgtta cccagggagc ctcaatgact atgaagaact gaaacacctg 360ccagctaatg acctctgtta cccaggggagc ctcaatgact atgaagaact gaaacacctg 360
ttgagcagaa taaatcattt tgagaagatt ctgatcatcc ccaagagttc atggccaaac 420ttgagcagaa taaatcattt tgagaagatt ctgatcatcc ccaagagttc atggccaaac 420
catgaaacat cactaggggt gagcgcagct tgtccatacc agggagcgcc ctcctttttc 480catgaaacat cactaggggt gagcgcagct tgtccatacc agggagcgcc ctcctttttc 480
agaaatgtgg tgtggcttat caaaaagaac gatgcatacc caacaataaa gataagctac 540agaaatgtgg tgtggcttat caaaaagaac gatgcatacc caacaataaa gataagctac 540
aataatacca atcgggaaga tctcttgata ctgtggggga ttcatcattc caacaatgca 600aataatacca atcgggaaga tctcttgata ctgtggggga ttcatcattc caacaatgca 600
gaagagcaga taaatctcta taaaaaccca accacctaca tttcagttgg aacatcaact 660gaagagcaga taaatctcta taaaaaccca accacctaca tttcagttgg aacatcaact 660
ttaaaccaga ggttggtacc aaaaatagct actagatccc aagtaaacgg gcaacgtgga 720ttaaaccaga ggttggtacc aaaaatagct actagatccc aagtaaacgg gcaacgtgga 720
agaatggact tcttctggac aattttaaaa ccggatgatg caatccattt cgagagtaat 780agaatggact tcttctggac aattttaaaa ccggatgatg caatccattt cgagagtaat 780
ggaaatttca ttgctccaga atatgcatac aaaattgtca agaaagggga ctcaacaatt 840ggaaatttca ttgctccaga atatgcatac aaaattgtca agaaagggga ctcaacaatt 840
atgaaaagtg gagtggaata tggccactgc aacaccaaat gtcaaacccc agtaggagcg 900atgaaaagtg gagtggaata tggccactgc aacaccaaat gtcaaacccc agtaggagcg 900
ataaattcta gtatgccctt ccacaacata catcctctca ccattgggga atgccccaaa 960ataaattcta gtatgccctt ccacaacata catcctctca ccattgggga atgccccaaa 960
tacgtgaaat caaacaagtt ggtccttgcg actgggctca gaaatagtcc tctaagagaa 1020tacgtgaaat caaacaagtt ggtccttgcg actgggctca gaaatagtcc tctaagagaa 1020
actagaggcc tgttcggggc gatagcaggg tttatagagg gaggatggca gggaatggtt 1080actagaggcc tgttcggggc gatagcaggg tttatagagg gaggatggca gggaatggtt 1080
gatggttggt atgggtacca ccatagcaat gagcagggga gtgggtacgc tgcagacaaa 1140gatggttggt atgggtacca ccatagcaat gagcagggga gtgggtacgc tgcagacaaa 1140
gaatccaccc aaaaggcaat agatggagtt accaataagg tcaactcaat cattgacaaa 1200gaatccaccc aaaaggcaat agatggagtt accaataagg tcaactcaat cattgacaaa 1200
atgaacactc aatttgaggc agttggaagg gagtttaata acttagaaag gaggatagag 1260atgaacactc aatttgaggc agttggaagg gagtttaata acttagaaag gaggatagag 1260
aatttgaaca agaaaatgga agacggattc ctagatgtct ggacctataa tgctgaactt 1320aatttgaaca agaaaatgga agacggattc ctagatgtct ggacctataa tgctgaactt 1320
ctagttctca tggaaaacga gaggactcta gatttccatg attcaaatgt caagaacctt 1380ctagttctca tggaaaacga gaggactcta gatttccatg attcaaatgt caagaacctt 1380
tacgacaaag tcagactaca gcttagggat aatgcaaagg agctgggtaa cggctgtttc 1440tacgacaaag tcagactaca gcttagggat aatgcaaagg agctgggtaa cggctgtttc 1440
gaattctatc acaaatgcga taatgaatgt atggaaagtg tgagaaatgg gacgtatgac 1500gaattctatc acaaatgcga taatgaatgt atggaaagtg tgagaaatgg gacgtatgac 1500
taccctcagt attcagaaga agcaagatta aaaagagaag aaataagcgg agtgaaatta 1560taccctcagt attcagaaga agcaagatta aaaagagaag aaataagcgg agtgaaatta 1560
gaatcaatag gaacttacca gatactgtca atttattcaa cagcggcgag ttccctagca 1620gaatcaatag gaacttacca gatactgtca atttattcaa cagcggcgag ttccctagca 1620
ctggcaatca tgatggctgg tctatcttta tggatgtgct ccaatgggtc gttacagtgc 1680ctggcaatca tgatggctgg tctatcttta tggatgtgct ccaatgggtc gttacagtgc 1680
agaatttgca tttaa 1695agaatttgca tttaa 1695
<210> 2<210> 2
<211> 1413<211> 1413
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 2<400> 2
atgaatccaa atcagaaaat agcgaccatt ggctccatct cattgggact agttgtattc 60atgaatccaa atcagaaaat agcgaccatt ggctccatct cattgggact agttgtattc 60
aatgttctac tgcatgcctt gagcatcata ttaatggtgt tagccctggg gaaaagtgaa 120aatgttctac tgcatgcctt gagcatcata ttaatggtgt tagccctggg gaaaagtgaa 120
aacaatggaa tctgcaaggg aactatagta agggaatata atgaaacagt taggatagag 180aacaatggaa tctgcaaggg aactatagta agggaatata atgaaacagt taggatagag 180
aaagtgaccc agtggtacaa cactagtgta gtcgaacatg taccgcattg gaacgagggc 240aaagtgaccc agtggtacaa cactagtgta gtcgaacatg taccgcattg gaacgagggc 240
gcttatataa acaacaccga accaatatgt gatgtcaagg gctttgcacc tttttccaag 300gcttatataa acaacaccga accaatatgt gatgtcaagg gctttgcacc tttttccaag 300
gacaacggaa taagaattgg ctccagagga catatttttg tcataaggga gcctttcgtc 360gacaacggaa taagaattgg ctccagagga catatttttg tcataaggga gcctttcgtc 360
tcttgttcac ctgtagagtg cagaactttc ttcctcactc agggagctct actcaatgac 420tcttgttcac ctgtagagtg cagaactttc ttcctcactc agggagctct actcaatgac 420
aaacactcaa atggaacagt gaaggatagg agcccattca gaactctcat gagtgtcgaa 480aaacactcaa atggaacagt gaaggatagg agcccattca gaactctcat gagtgtcgaa 480
gtgggtcaat cacccaatgt gtatcaagca aggtttgaag ctgtagcatg gtcagcaaca 540gtgggtcaat cacccaatgt gtatcaagca aggtttgaag ctgtagcatg gtcagcaaca 540
gcctgtcatg atggtaagaa atggatgacg attggtgtga cagggccaga ttcgaaagca 600gcctgtcatg atggtaagaa atggatgacg attggtgtga cagggccaga ttcgaaagca 600
atagcagtag tccattacgg aggagtgccc actgatattg ttaactcctg ggcaggagac 660atagcagtag tccattacgg aggagtgccc actgatattg ttaactcctg ggcaggagac 660
atattacgga ctcaggagtc atcttgtact tgcattcaag gtaattgtta ttgggtaatg 720atattacgga ctcaggagtc atcttgtact tgcattcaag gtaattgtta ttgggtaatg 720
actgacggtc catccaatag acaggcgcag tatagaatat acaaagcaaa tcaaggcaaa 780actgacggtc catccaatag acaggcgcag tatagaatat acaaagcaaa tcaaggcaaa 780
ataattgacc aagcagatgt cagctttagt ggagggcata ttgaggaatg ctcttgttat 840ataattgacc aagcagatgt cagctttagt ggagggcata ttgaggaatg ctcttgttat 840
ccaaatgatg gtaaagtgga atgcgtatgt agagacaact ggatgggaac taacaggcct 900ccaaatgatg gtaaagtgga atgcgtatgt agagacaact ggatgggaac taacaggcct 900
gtgctagtta tctcgcctga cctctcttac agggttgggt atttatgtgc gggattgccc 960gtgctagtta tctcgcctga cctctcttac agggttgggt atttatgtgc gggattgccc 960
agtgacactc caagagggga agatgcccaa tttgtcggtt cgtgcactag tcccatggga 1020agtgacactc caagagggga agatgcccaa tttgtcggtt cgtgcactag tcccatggga 1020
aatcaggggt atggcgtaaa aggtttcggg tttcgacagg gaactgatgt gtggatgggg 1080aatcaggggt atggcgtaaa aggtttcggg tttcgacagg gaactgatgt gtggatgggg 1080
cggacaatta gtcgaacctc caggtcaggg tttgaaataa taaggataaa gaatggttgg 1140cggacaatta gtcgaacctc caggtcaggg tttgaaataa taaggataaa gaatggttgg 1140
acgcagacaa gcaaagaaca gattagaagg caggtggttg ttgataattt gaattggtcg 1200acgcagacaa gcaaagaaca gattagaagg caggtggttg ttgataattt gaattggtcg 1200
ggatacagtg ggtctttcac tttaccagta gaattgtctg ggagggaatg tttagtcccc 1260ggatacagtg ggtctttcac ttaccagta gaattgtctg ggagggaatg tttagtcccc 1260
tgtttttggg tcgaaatgat cagaggcagg ccagaagaaa gaacaatctg gacctctagt 1320tgtttttggg tcgaaatgat cagaggcagg ccagaagaaa gaacaatctg gacctctagt 1320
agctccattg taatgtgtgg agttgatcat gaaattgccg attggtcatg gcacgatgga 1380agctccattg taatgtgtgg agttgatcat gaaattgccg attggtcatg gcacgatgga 1380
gctattcttc cctttgacat cgatgggatg taa 1413gctattcttc cctttgacat cgatgggatg taa 1413
<210> 3<210> 3
<211> 2280<211> 2280
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 3<400> 3
atggaaagaa taaaagaact aagaaatcta atgtcgcagt ctcgcacccg cgagatactc 60atggaaagaa taaaagaact aagaaatcta atgtcgcagt ctcgcacccg cgagatactc 60
acaaaaacca ccgtggacca tatggccata atcaagaagt acacatcagg aagacaggag 120acaaaaacca ccgtggacca tatggccata atcaagaagt acacatcagg aagacaggag 120
aagaacccag cacttaggat gaaatggatg atggcaatga aatatccaat tacagcagac 180aagaacccag cacttaggat gaaatggatg atggcaatga aatatccaat tacagcagac 180
aagaggataa cggaaatgat tcctgagaga aatgagcaag gacaaacttt atggagtaaa 240aagaggataa cggaaatgat tcctgagaga aatgagcaag gacaaacttt atggagtaaa 240
atgaatgatg ccggatcaga ccgagtgatg gtatcacctc tggctgtgac atggtggaat 300atgaatgatg ccggatcaga ccgagtgatg gtatcacctc tggctgtgac atggtggaat 300
aggaatggac caatgacaaa tacagttcat tatccaaaaa tctacaaaac ttattttgaa 360aggaatggac caatgacaaa tacagttcat tatccaaaaa tctacaaaac ttattttgaa 360
agagtcgaaa ggctaaagca tggaaccttt ggccctgtcc attttagaaa ccaagtcaaa 420agagtcgaaa ggctaaagca tggaaccttt ggccctgtcc attttagaaa ccaagtcaaa 420
atacgtcgga gagttgacat aaatcctggt catgcagatc tcagtgccaa ggaggcacag 480atacgtcgga gagttgacat aaatcctggt catgcagatc tcagtgccaa ggaggcacag 480
gatgtaatca tggaagttgt tttccctaac gaagtgggag ccaggatact aacatcggaa 540gatgtaatca tggaagttgt tttccctaac gaagtgggag ccaggatact aacatcggaa 540
tcgcaactaa cgataaccaa agagaagaaa gaagaactcc aggattgcaa aatttctcct 600tcgcaactaa cgataaccaa agagaagaaa gaagaactcc aggattgcaa aatttctcct 600
ttgatggttg catacatgtt ggagagagaa ctggtccgca aaacgagatt cctcccagtg 660ttgatggttg catacatgtt ggagagagaa ctggtccgca aaacgagatt cctcccagtg 660
gctggtggaa caagcagtgt gtacattgaa gtgttgcatt tgactcaagg aacatgctgg 720gctggtggaa caagcagtgt gtacattgaa gtgttgcatt tgactcaagg aacatgctgg 720
gaacagatgt atactccagg aggggaagtg aagaatgatg atgttgatca aagcttgatt 780gaacagatgt atactccagg aggggaagtg aagaatgatg atgttgatca aagcttgatt 780
attgctgcta ggaacatagt gagaagagct gcagtatcag cagacccact agcatcttta 840attgctgcta ggaacatagt gagaagagct gcagtatcag cagacccact agcatcttta 840
ttggagatgt gccacagcac acagattggt ggaattagga tggtagacat ccttaagcag 900ttggagatgt gccacagcac acagattggt ggaattagga tggtagacat ccttaagcag 900
aacccaacag aagagcaagc cgtggatata tgcaaggctg caatgggact gagaattagc 960aacccaacag aagagcaagc cgtggatata tgcaaggctg caatgggact gagaattagc 960
tcatccttca gttttggtgg attcacattt aagagaacaa gcggatcatc agtcaagaga 1020tcatccttca gttttggtgg attcacattt aagagaacaa gcggatcatc agtcaagaga 1020
gaggaagagg tgcttacggg caatcttcaa acattgaaga taagagtgca tgagggatct 1080gaggaagagg tgcttacggg caatcttcaa acattgaaga taagagtgca tgagggatct 1080
gaagagttca caatggttgg gagaagagca acagccatac tcagaaaagc aaccaggaga 1140gaagagttca caatggttgg gagaagagca acagccatac tcagaaaagc aaccaggaga 1140
ttgattcagc tgatagtgag tgggagagac gaacagtcga ttgccgaagc aataattgtg 1200ttgattcagc tgatagtgag tgggagagac gaacagtcga ttgccgaagc aataattgtg 1200
gccatggtat tttcacaaga ggattgtatg ataaaagcag ttagaggtga tctgaatttc 1260gccatggtat tttcacaaga ggattgtatg ataaaagcag ttagaggtga tctgaatttc 1260
gtcaataggg cgaatcagcg actgaatcct atgcatcaac ttttaagaca ttttcagaag 1320gtcaataggg cgaatcagcg actgaatcct atgcatcaac ttttaagaca ttttcagaag 1320
gatgcgaaag tgctttttca aaattgggga gttgaaccta tcgacaatgt gatgggaatg 1380gatgcgaaag tgctttttca aaattgggga gttgaaccta tcgacaatgt gatgggaatg 1380
attgggatat tgcccgacat gactccaagc atcgagatgt caatgagagg agtgagaatc 1440attgggat tgcccgacat gactccaagc atcgagatgt caatgagagg agtgagaatc 1440
agcaaaatgg gtgtagatga gtactccagc acggagaggg tagtggtgag cattgaccgg 1500agcaaaatgg gtgtagatga gtactccagc acggagaggg tagtggtgag cattgaccgg 1500
ttcttgagag tcagggacca acgaggaaat gtactactgt ctcccgagga ggtcagtgaa 1560ttcttgagag tcagggacca acgaggaaat gtactactgt ctcccgagga ggtcagtgaa 1560
acacagggaa cagagaaact gacaataact tactcatcgt caatgatgtg ggagattaat 1620acacagggaa cagagaaact gacaataact tactcatcgt caatgatgtg ggagattaat 1620
ggtcctgaat cagtgttggt caatacctat caatggatca tcagaaactg ggaaactgtt 1680ggtcctgaat cagtgttggt caatacctat caatggatca tcagaaactg ggaaactgtt 1680
aaaattcagt ggtcccagaa ccctacaatg ctatacaata aaatggaatt tgaaccattt 1740aaaattcagt ggtcccagaa ccctacaatg ctatacaata aaatggaatt tgaaccattt 1740
cagtctttag tacctaaggc cattagaggc caatacagtg ggtttgtaag aactctgttc 1800cagtctttag tacctaaggc cattagaggc caatacagtg ggtttgtaag aactctgttc 1800
caacaaatga gggatgtgct tgggacattt gataccgcac agataataaa acttcttccc 1860caacaaatga gggatgtgct tgggacattt gataccgcac agataataaa acttcttccc 1860
ttcgcagccg ctccaccaga gcaaagtaga atgcagttct cctcatttac tgtgaatgtg 1920ttcgcagccg ctccaccaga gcaaagtaga atgcagttct cctcatttac tgtgaatgtg 1920
aggggatcag gaatgagaat acttgtaagg ggcaattctc ctgtattcaa ctacaacaag 1980aggggatcag gaatgagaat acttgtaagg ggcaattctc ctgtattcaa ctacaacaag 1980
gccacgaaga gactcacagt tctcggaaag gatgctggca ctttaaccga agacccagat 2040gccacgaaga gactcacagt tctcggaaag gatgctggca ctttaaccga agacccagat 2040
gaaggcacag ctggagtgga gtccgctgtt ctgaggggat tcctcattct gggcaaagaa 2100gaaggcacag ctggagtgga gtccgctgtt ctgaggggat tcctcattct gggcaaagaa 2100
gacaggagat atgggccagc attaagcatc aatgaactga gcaaccttgc gaaaggagag 2160gacaggagat atgggccagc attaagcatc aatgaactga gcaaccttgc gaaaggagag 2160
aaggctaatg tgctaattgg gcaaggagac gtggtgttgg taatgaaacg aaaacgggac 2220aaggctaatg tgctaattgg gcaaggagac gtggtgttgg taatgaaacg aaaacgggac 2220
tctagcatac ttactgacag ccagacagcg accaaaagaa ttcggatggc catcaattag 2280tctagcatac ttactgacag ccagacagcg accaaaagaa ttcggatggc catcaattag 2280
<210> 4<210> 4
<211> 2274<211> 2274
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 4<400> 4
atggatgtca atccgacctt acttttctta aaagtgccag cacaaaatgc tataagcaca 60atggatgtca atccgacctt acttttctta aaagtgccag cacaaaatgc tataagcaca 60
actttccctt ataccggaga ccctccttac agccatggga caggaacagg atacaccatg 120actttccctt ataccggaga ccctccttac agccatggga caggaacagg atacaccatg 120
gatactgtca acaggacaca tcagtactca gaaaagggaa gatggacaac aaacaccgaa 180gatactgtca acaggacaca tcagtactca gaaaagggaa gatggacaac aaacaccgaa 180
actggagcac cgcaactcaa cccgattgat gggccactgc cagaagacaa tgaaccaagt 240actggagcac cgcaactcaa cccgattgat gggccactgc cagaagacaa tgaaccaagt 240
ggttatgccc aaacagattg tgtattggaa gcaatggctt tccttgagga atcccatcct 300ggttatgccc aaacagattg tgtattggaa gcaatggctt tccttgagga atcccatcct 300
ggtatttttg aaaactcgtg tattgaaacg atggaggttg ttcagcaaac acgagtagac 360ggtatttttg aaaactcgtg tattgaaacg atggaggttg ttcagcaaac acgagtagac 360
aagctgacac aaggccgaca gacctatgac tggactttaa atagaaacca gcctgctgca 420aagctgacac aaggccgaca gacctatgac tggactttaa atagaaacca gcctgctgca 420
acagcattgg ccaacacaat agaagtgttc agatcaaatg gcctcacggc caatgagtca 480acagcattgg ccaacacaat agaagtgttc agatcaaatg gcctcacggc caatgagtca 480
ggaaggctca tagacttcct taaggatgta atggagtcaa tgaaaaaaga agaaatgggg 540ggaaggctca tagacttcct taaggatgta atggagtcaa tgaaaaaaga agaaatgggg 540
atcacaactc attttcagag aaagagacgg gtgagagaca atatgactaa gaaaatgata 600atcacaactc attttcagag aaagagacgg gtgagagaca atatgactaa gaaaatgata 600
acacagagaa caataggtaa aaggaaacag agattgaaca aaaggggtta tctaattaga 660acacagagaa caataggtaa aaggaaacag agattgaaca aaaggggtta tctaattaga 660
gcattgaccc tgaacacaat gaccaaagat gctgagagag ggaagctaaa acggagagca 720gcattgaccc tgaacacaat gaccaaagat gctgagagag ggaagctaaa acggagagca 720
attgcaaccc cagggatgca aataaggggg tttgtatact ttgttgagac actggcaagg 780attgcaaccc cagggatgca aataaggggg tttgtatact ttgttgagac actggcaagg 780
agtatatgtg agaaacttga acaatcaggg ttgccagttg gaggcaatga gaagaaagca 840agtatatgtg agaaacttga acaatcaggg ttgccagttg gaggcaatga gaagaaagca 840
aagttggcaa atgttgtaag gaagatgatg accaattctc aggacaccga actttctttc 900aagttggcaa atgttgtaag gaagatgatg accaattctc aggacaccga actttctttc 900
accatcactg gagataacac caaatggaac gaaaatcaga atcctcggat gtttttggcc 960accatcactg gagataacac caaatggaac gaaaatcaga atcctcggat gtttttggcc 960
atgatcacat atatgaccag aaatcagccc gaatggttca gaaatgttct aagtattgct 1020atgatcacat atatgaccag aaatcagccc gaatggttca gaaatgttct aagtattgct 1020
ccaataatgt tctcaaacaa aatggcgaga ctgggaaaag ggtatatgtt tgagagcaag 1080ccaataatgt tctcaaacaa aatggcgaga ctgggaaaag ggtatatgtt tgagagcaag 1080
agtatgaaac ttagaactca aatacctgca gaaatgctag caagcattga tttgaaatat 1140agtatgaaac ttagaactca aatacctgca gaaatgctag caagcattga tttgaaatat 1140
ttcaatgatt caacaagaaa gaagattgaa aaaatccgac cgctcttaat agaggggact 1200ttcaatgatt caacaagaaa gaagattgaa aaaatccgac cgctcttaat agaggggact 1200
gcatcattga gccctggaat gatgatgggc atgttcaata tgttaagcac tgtattaggc 1260gcatcattga gccctggaat gatgatgggc atgttcaata tgttaagcac tgtattaggc 1260
gtctccatcc tgaatcttgg acaaaagaga tacaccaaga ctacttactg gtgggatggt 1320gtctccatcc tgaatcttgg acaaaagaga tacaccaaga ctacttactg gtgggatggt 1320
cttcaatcct ctgacgattt tgctctgatt gtgaatgcac ccaatcatga agggattcaa 1380cttcaatcct ctgacgattt tgctctgatt gtgaatgcac ccaatcatga agggattcaa 1380
gccggagtcg acaggtttta tcgaacctgt aagctacttg gaatcaatat gagcaagaaa 1440gccggagtcg acaggtttta tcgaacctgt aagctacttg gaatcaatat gagcaagaaa 1440
aagtcttaca taaacagaac aggtacattt gaattcacaa gttttttcta tcgttatggg 1500aagtcttaca taaacagaac aggtacattt gaattcacaa gttttttcta tcgttatgggg 1500
tttgttgcca atttcagcat ggagcttccc agttttgggg tgtctgggat caacgagtca 1560tttgttgcca atttcagcat ggagcttccc agttttgggg tgtctgggat caacgagtca 1560
gcggacatga gtattggagt tactgtcatc aaaaacaata tgataaacaa tgatcttggt 1620gcggacatga gtattggagt tactgtcatc aaaaacaata tgataaacaa tgatcttggt 1620
ccagcaacag ctcaaatggc ccttcagttg ttcatcaaag attacaggta cacgtaccga 1680ccagcaacag ctcaaatggc ccttcagttg ttcatcaaag attacaggta cacgtaccga 1680
tgccatagag gtgacacaca aatacaaacc cgaagatcat ttgaaataaa gaaactgtgg 1740tgccatagag gtgacacaca aatacaaacc cgaagatcat ttgaaataaa gaaactgtgg 1740
gagcaaaccc gttccaaagc tggactgctg gtctccgacg gaggcccaaa tttatacaac 1800gagcaaaccc gttccaaagc tggactgctg gtctccgacg gaggcccaaa tttatacaac 1800
attagaaatc tccacattcc tgaagtctgc ctaaaatggg aattgatgga tgaggattac 1860attagaaatc tccacattcc tgaagtctgc ctaaaatggg aattgatgga tgaggattac 1860
caggggcgtt tatgcaaccc actgaaccca tttgtcagcc ataaagaaat tgaatcaatg 1920caggggcgtt tatgcaaccc actgaaccca tttgtcagcc ataaagaaat tgaatcaatg 1920
aacaatgcag tgatgatgcc agcacatggt ccagccaaaa acatggagta tgatgctgtt 1980aacaatgcag tgatgatgcc agcacatggt ccagccaaaa acatggagta tgatgctgtt 1980
gcaacaacac actcctggat ccccaaaaga aatcgatcca tcttgaatac aagtcaaaga 2040gcaacaacac actcctggat ccccaaaaga aatcgatcca tcttgaatac aagtcaaaga 2040
ggagtacttg aagatgaaca aatgtaccaa aggtgctgca atttatttga aaaattcttc 2100ggagtacttg aagatgaaca aatgtaccaa aggtgctgca atttatttga aaaattcttc 2100
cccagcagtt catacagaag accagtcggg atatccagta tggtggaggc tatggtttcc 2160cccagcagtt catacagaag accagtcggg atatccagta tggtggaggc tatggtttcc 2160
agagcccgaa ttgatgcacg gattgatttc gaatctggaa ggataaagaa agaagagttc 2220agagcccgaa ttgatgcacg gattgatttc gaatctggaa ggataaagaa agaagagttc 2220
actgagatca tgaagatctg ttccaccatt gaagagctca gacggcaaaa atag 2274actgagatca tgaagatctg ttccaccatt gaagagctca gacggcaaaa atag 2274
<210> 5<210> 5
<211> 2151<211> 2151
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 5<400> 5
atggaagatt ttgtgcgaca atgcttcaat ccgatgattg tcgagcttgc ggaaaaaaca 60atggaagatt ttgtgcgaca atgcttcaat ccgatgattg tcgagcttgc ggaaaaaaca 60
atgaaagagt atggggagga cctgaaaatc gaaacaaaca aatttgcagc aatatgcact 120atgaaagagt atggggagga cctgaaaatc gaaacaaaca aatttgcagc aatatgcact 120
cacttggaag tatgcttcat gtattcagat ttccacttca tcaatgagca aggcgagtca 180cacttggaag tatgcttcat gtattcagat ttccacttca tcaatgagca aggcgagtca 180
ataatcgtag aacttggtga tcctaatgca cttttgaagc acagatttga aataatcgag 240ataatcgtag aacttggtga tcctaatgca cttttgaagc acagatttga aataatcgag 240
ggaagagatc gcacaatggc ctggacagta gtaaacagta tttgcaacac tacaggggct 300ggaagagatc gcacaatggc ctggacagta gtaaacagta tttgcaacac tacaggggct 300
gagaaaccaa agtttctacc agatttgtat gattacaagg aaaatagatt catcgaaatt 360gagaaaccaa agtttctacc agatttgtat gattacaagg aaaatagatt catcgaaatt 360
ggagtaacaa ggagagaagt tcacatatac tatctggaaa aggccaataa aattaaatct 420ggagtaacaa ggagagaagt tcacatatac tatctggaaa aggccaataa aattaaatct 420
gagaaaacac acatccacat tttctcgttc actggggaag aaatggccac aagggccgac 480gagaaaacac acatccacat tttctcgttc actggggaag aaatggccac aagggccgac 480
tacactctcg atgaagaaag cagggctagg atcaaaacca ggctattcac cataagacaa 540tacactctcg atgaagaaag cagggctagg atcaaaacca ggctattcac cataagacaa 540
gaaatggcca gcagaggcct ctgggattcc tttcgtcagt ccgagagagg agaagagaca 600gaaatggcca gcagaggcct ctgggattcc tttcgtcagt ccgagagagg agaagagaca 600
attgaagaaa ggtttgaaat cacaggaaca atgcgcaagc ttgccgacca aagtctcccg 660attgaagaaa ggtttgaaat cacaggaaca atgcgcaagc ttgccgacca aagtctcccg 660
ccgaacttct ccagccttga aaattttaga gcctatgtgg atggattcga accgaacggc 720ccgaacttct ccagccttga aaattttaga gcctatgtgg atggattcga accgaacggc 720
tacattgagg gcaagctgtc tcaaatgtcc aaagaagtaa atgctagaat tgaacctttt 780tacattgagg gcaagctgtc tcaaatgtcc aaagaagtaa atgctagaat tgaacctttt 780
ttgaaaacaa caccacgacc acttagactt ccgaatgggc ctccctgttc tcagcggtcc 840ttgaaaacaa caccacgacc acttagactt ccgaatgggc ctccctgttc tcagcggtcc 840
aaattcctgc tgatggatgc cttaaaatta agcattgagg acccaagtca tgaaggagag 900aaattcctgc tgatggatgc cttaaaatta agcattgagg acccaagtca tgaaggagag 900
ggaataccgc tatatgatgc aatcaaatgc atgagaacat tctttggatg gaaggaaccc 960ggaataccgc tatatgatgc aatcaaatgc atgagaacat tctttggatg gaaggaaccc 960
aatgttgtta aaccacacga aaagggaata aatccaaatt atcttctgtc atggaagcaa 1020aatgttgtta aaccacacga aaagggaata aatccaaatt atcttctgtc atggaagcaa 1020
gtactggcag aactgcagga cattgagaat gaggagaaaa ttccaaagac taaaaatatg 1080gtactggcag aactgcagga cattgagaat gaggagaaaa ttccaaagac taaaaatatg 1080
aaaaaaacaa gtcagctaaa gtgggcactt ggtgagaaca tggcaccaga aaaggtagac 1140aaaaaaacaa gtcagctaaa gtgggcactt ggtgagaaca tggcaccaga aaaggtagac 1140
tttgacgact gtaaagatgt aggtgatttg aagcaatatg atagtgatga accagaattg 1200tttgacgact gtaaagatgt aggtgatttg aagcaatatg atagtgatga accagaattg 1200
aggtcgcttg caagttggat tcagaatgag ttcaacaagg catgcgaact gacagattca 1260aggtcgcttg caagttggat tcagaatgag ttcaacaagg catgcgaact gacagattca 1260
agctggatag agcttgatga gattggagaa gatgtggctc caattgaaca cattgcaagc 1320agctggatag agcttgatga gattggagaa gatgtggctc caattgaaca cattgcaagc 1320
atgagaagga attatttcac atcagaggtg tctcactgca gagccacaga atacataatg 1380atgagaagga attatttcac atcagaggtg tctcactgca gagccacaga atacataatg 1380
aagggggtgt acatcaatac tgccttactt aatgcatctt gtgcagcaat ggatgatttc 1440aagggggtgt acatcaatac tgccttactt aatgcatctt gtgcagcaat ggatgatttc 1440
caattaattc caatgataag caagtgtaga actaaggagg gaaggcgaaa gaccaacttg 1500caattaattc caatgataag caagtgtaga actaaggagg gaaggcgaaa gaccaacttg 1500
tatggtttca tcataaaagg aagatcccac ttaaggaatg acaccgacgt ggtaaacttt 1560tatggtttca tcataaaagg aagatcccac ttaaggaatg acaccgacgt ggtaaacttt 1560
gtgagcatgg agttttctct cactgaccca agacttgaac cacacaaatg ggagaagtac 1620gtgagcatgg agttttctct cactgaccca agacttgaac cacacaaatg ggagaagtac 1620
tgtgttcttg agataggaga tatgcttcta agaagtgcca taggccaggt ttcaaggccc 1680tgtgttcttg agataggaga tatgcttcta agaagtgcca taggccaggt ttcaaggccc 1680
atgttcttgt atgtgaggac aaatggaacc tcaaaaatta aaatgaaatg gggaatggag 1740atgttcttgt atgtgaggac aaatggaacc tcaaaaatta aaatgaaatg gggaatggag 1740
atgaggcgtt gtctcctcca gtcacttcaa caaattgaga gtatgattga agctgagtcc 1800atgaggcgtt gtctcctcca gtcacttcaa caaattgaga gtatgattga agctgagtcc 1800
tctgtcaaag agaaagacat gaccaaagag ttctttgaga acaaatcaga aacatggccc 1860tctgtcaaag agaaagacat gaccaaagag ttctttgaga acaaatcaga aacatggccc 1860
attggagagt ctcccaaagg agtggaggaa agttccattg ggaaggtctg caggacttta 1920attggagagt ctcccaaagg agtggaggaa agttccattg ggaaggtctg caggacttta 1920
ttagcaaagt cggtatttaa cagcttgtat gcatctccac aactagaagg attttcagct 1980ttagcaaagt cggtatttaa cagcttgtat gcatctccac aactagaagg attttcagct 1980
gaatcaagaa aactgcttct tatcgttcag gctcttaggg acaatctgga acctgggacc 2040gaatcaagaa aactgcttct tatcgttcag gctcttaggg acaatctgga acctgggacc 2040
tttgatcttg gggggctata tgaagcaatt gaggagtgcc taattaatga tccctgggtt 2100tttgatcttg gggggctata tgaagcaatt gaggagtgcc taattaatga tccctgggtt 2100
ttgcttaatg cttcttggtt caactccttc cttacacatg cattgagtta g 2151ttgcttaatg cttcttggtt caactccttc cttacacatg cattgagtta g 2151
<210> 6<210> 6
<211> 1497<211> 1497
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 6<400> 6
atggcgtccc aaggcaccaa acggtcttac gaacagatgg agactgatgg agaacgccag 60atggcgtccc aaggcaccaa acggtcttac gaacagatgg agactgatgg agaacgccag 60
aatgccactg aaatcagagc atccgtcgga aaaatgattg gtggaattgg acgattctac 120aatgccactg aaatcagagc atccgtcgga aaaatgattg gtggaattgg acgattctac 120
atccaaatgt gcacagaact taaactcagt gattatgagg gacggttgat ccaaaacagc 180atccaaatgt gcacagaact taaactcagt gattatgagg gacggttgat ccaaaacagc 180
ttaacaatag agagaatggt gctctctgct tttgacgaaa ggagaaataa atacctggaa 240ttaacaatag agagaatggt gctctctgct tttgacgaaa ggagaaataa atacctggaa 240
gaacatccca gtgcggggaa agatcctaag aaaactggag gacctatata cagaagagta 300gaacatccca gtgcgggggaa agatcctaag aaaactggag gacctatata cagaagagta 300
aacggaaagt ggatgagaga actcatcctt tatgacaaag aagaaataag gcgaatctgg 360aacggaaagt ggatgagaga actcatcctt tatgacaaag aagaaataag gcgaatctgg 360
cgccaagcta ataatggtga cgatgcaacg gctggtctga ctcacatgat gatctggcat 420cgccaagcta ataatggtga cgatgcaacg gctggtctga ctcacatgat gatctggcat 420
tccaatttga atgatgcaac ttatcagagg acaagggctc ttgttcgcac cggaatggat 480tccaatttga atgatgcaac ttatcagagg acaagggctc ttgttcgcac cggaatggat 480
cccaggatgt gctctctgat gcaaggttca actctcccta ggaggtctgg agccgcaggt 540cccaggatgt gctctctgat gcaaggttca actctcccta ggaggtctgg agccgcaggt 540
gctgcagtca aaggagttgg aacaatggtg atggaattgg tcaggatgat caaacgtggg 600gctgcagtca aaggagttgg aacaatggtg atggaattgg tcaggatgat caaacgtggg 600
atcaatgatc ggaacttctg gaggggtgag aatggacgaa aaacaagaat tgcttatgaa 660atcaatgatc ggaacttctg gaggggtgag aatggacgaa aaacaagaat tgcttatgaa 660
agaatgtgca acattctcaa agggaaattt caaactgctg cacaaaaagc aatgatggat 720agaatgtgca acattctcaa agggaaattt caaactgctg cacaaaaagc aatgatggat 720
caagtgagag agagccggaa cccagggaat gctgagttcg aagatctcac ttttctagca 780caagtgagag agagccggaa cccagggaat gctgagttcg aagatctcac ttttctagca 780
cggtctgcac tcatattgag agggtcggtt gctcacaagt cctgcctgcc tgcctgtgtg 840cggtctgcac tcatattgag agggtcggtt gctcacaagt cctgcctgcc tgcctgtgtg 840
tatggacctg ccgtagccag tgggtacgac tttgaaagag agggatactc tctagtcgga 900tatggacctg ccgtagccag tgggtacgac tttgaaagag agggatactc tctagtcgga 900
atagaccctt tcagactgct tcaaaacagc caagtgtaca gcctaatcag accaaatgag 960atagaccctt tcagactgct tcaaaacagc caagtgtaca gcctaatcag accaaatgag 960
aatccagcac acaagagtca actggtgtgg atggcatgcc attctgccgc atttgaagat 1020aatccagcac acaagagtca actggtgtgg atggcatgcc attctgccgc atttgaagat 1020
ctaagagtat tgagcttcat caaagggacg aaggtggtcc caagagggaa gctttccact 1080ctaagagtat tgagcttcat caaagggacg aaggtggtcc caagagggaa gctttccact 1080
agaggagttc aaattgcttc caatgaaaat atggagacta tggaatcaag tacacttgaa 1140agaggagttc aaattgcttc caatgaaaat atggagacta tggaatcaag tacacttgaa 1140
ctgagaagca ggtactgggc cataaggacc agaagtggag gaaacaccaa tcaacagagg 1200ctgagaagca ggtactgggc cataaggacc agaagtggag gaaacaccaa tcaacagagg 1200
gcatctgcgg gccaaatcag catacaacct acgttctcag tacagagaaa tctccctttt 1260gcatctgcgg gccaaatcag catacaacct acgttctcag tacagagaaa tctccctttt 1260
gacagaacaa ccgttatggc agcattcact gggaatacag aggggagaac atctgacatg 1320gacagaacaa ccgttatggc agcattcact gggaatacag aggggagaac atctgacatg 1320
aggaccgaaa tcataaggat gatggaaagt gcaagaccag aagatgtgtc tttccagggg 1380aggaccgaaa tcataaggat gatggaaagt gcaagaccag aagatgtgtc tttccagggg 1380
cggggagtct tcgagctctc ggacgaaaag gcagcgagcc cgatcgtgcc ttcctttgac 1440cggggagtct tcgagctctc ggacgaaaag gcagcgagcc cgatcgtgcc ttcctttgac 1440
atgagtaatg aaggatctta tttcttcgga gacaatgcag aggagtacga caattaa 1497atgagtaatg aaggatctta tttcttcgga gacaatgcag aggagtacga caattaa 1497
<210> 7<210> 7
<211> 982<211> 982
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 7<400> 7
atgagtcttc taaccgaggt cgaaacgtac gttctctcta tcatcccgtc aggccccctc 60atgagtcttc taaccgaggt cgaaacgtac gttctctcta tcatcccgtc aggccccctc 60
aaagccgaga tcgcacagag acttgaagat gtctttgcag ggaagaacac cgatcttgag 120aaagccgaga tcgcacagag acttgaagat gtctttgcag ggaagaacac cgatcttgag 120
gttctcatgg aatggctaaa gacaagacca atcctgtcac ctctgactaa ggggatttta 180gttctcatgg aatggctaaa gacaagacca atcctgtcac ctctgactaa ggggatttta 180
ggatttgtgt tcacgctcac cgtgcccagt gagcgaggac tgcagcgtag acgctttgtc 240ggatttgtgt tcacgctcac cgtgcccagt gagcgaggac tgcagcgtag acgctttgtc 240
caaaatgccc ttaatgggaa cggggatcca aataacatgg acaaagcagt taaactgtat 300caaaatgccc ttaatgggaa cggggatcca aataacatgg acaaagcagt taaactgtat 300
aggaagctca agagggagat aacattccat ggggccaaag aaatctcact cagttattct 360aggaagctca agagggagat aacattccat ggggccaaag aaatctcact cagttattct 360
gctggtgcac ttgccagttg tatgggcctc atatacaaca ggatgggggc tgtgaccact 420gctggtgcac ttgccagttg tatgggcctc atatacaaca ggatgggggc tgtgaccact 420
gaagtggcat ttggcctggt atgtgcaacc tgtgaacaga ttgctgactc ccagcatcgg 480gaagtggcat ttggcctggt atgtgcaacc tgtgaacaga ttgctgactc ccagcatcgg 480
tctcataggc aaatggtgac aacaaccaac ccactaatca gacatgagaa cagaatggtt 540tctcataggc aaatggtgac aacaaccaac ccactaatca gacatgagaa cagaatggtt 540
ttagccagca ctacagctaa ggctatggag caaatggctg gatcgagtga gcaagcagca 600ttagccagca ctacagctaa ggctatggag caaatggctg gatcgagtga gcaagcagca 600
gaggccatgg aggttgctag tcaggctagg caaatggtgc aagcgatgag aaccattggg 660gaggccatgg aggttgctag tcaggctagg caaatggtgc aagcgatgag aaccattggg 660
actcatccta gctccagtgc tggtctgaaa aatgatcttc ttgaaaattt gcaggcctat 720actcatccta gctccagtgc tggtctgaaa aatgatcttc ttgaaaattt gcaggcctat 720
cagaaacgaa tgggggtgca gatgcaacgg ttcaagtgat cctctcgcta ttgccgcaaa 780cagaaacgaa tgggggtgca gatgcaacgg ttcaagtgat cctctcgcta ttgccgcaaa 780
tatcattggg atcttgcact tgatattgtg gattcttgat cgtctttttt tcaaatgcat 840tatcattggg atcttgcact tgatattgtg gattcttgat cgtctttttt tcaaatgcat 840
ttaccgtcgc tttaaatacg gactgaaagg agggccttct acggaaggag tgccaaagtc 900ttaccgtcgc tttaaatacg gactgaaagg agggccttct acggaaggag tgccaaagtc 900
tatgagggaa gaatatcgaa aggaacagca gagtgctgtg gatgctgacg atggtcattt 960tatgagggaa gaatatcgaa aggaacagca gagtgctgtg gatgctgacg atggtcattt 960
tgtcagcata gagctggagt aa 982tgtcagcata gagctggagt aa 982
<210> 8<210> 8
<211> 838<211> 838
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 8<400> 8
atggatccaa acactgtgtc aagctttcag gtagattgct ttctttggca tgtccgcaaa 60atggatccaa acactgtgtc aagctttcag gtagattgct ttctttggca tgtccgcaaa 60
cgagttgtag accaagaact aggtgatgcc ccattccttg atcggcttcg ccgagatcag 120cgagttgtag accaagaact aggtgatgcc ccattccttg atcggcttcg ccgagatcag 120
aaatccctaa gaggaagggg cagcactctt ggtctggaca tcgagacagc cacacgtgct 180aaatccctaa gaggaagggg cagcactctt ggtctggaca tcgagacagc cacacgtgct 180
ggaaagcaga tagtggagcg gattctgaaa gaagaatccg atgaggcact taaaatgacc 240ggaaagcaga tagtggagcg gattctgaaa gaagaatccg atgaggcact taaaatgacc 240
atggcctctg tacctgcgtc gcgttaccta accgacatga ctcttgagga aatgtcaagg 300atggcctctg tacctgcgtc gcgttaccta accgacatga ctcttgagga aatgtcaagg 300
gaatggtcca tgctcatacc caagcagaaa gtggcaggcc ctctttgtat cagaatggac 360gaatggtcca tgctcatacc caagcagaaa gtggcaggcc ctctttgtat cagaatggac 360
caggcgatca tggataaaaa catcatactg aaagcgaact tcagtgtgat ttttgaccgg 420caggcgatca tggataaaaa catcatactg aaagcgaact tcagtgtgat ttttgaccgg 420
ctggagactc taatattgct aagggctttc accgaagagg gagcaattgt tggcgaaatt 480ctggagactc taatattgct aagggctttc accgaagagg gagcaattgt tggcgaaatt 480
tcaccattgc cttctcttcc aggacatact gctgaggatg tcaaaaatgc agttggagtc 540tcaccattgc cttctcttcc aggacatact gctgaggatg tcaaaaatgc agttggagtc 540
ctcatcggag gacttgaatg gaatgataac acagttcgag tctctgaaac tctacagaga 600ctcatcggag gacttgaatg gaatgataac acagttcgag tctctgaaac tctacagaga 600
ttcgcttgga gaagcagtaa tgagaatggg agacctccac tcactccaaa acagaaacga 660ttcgcttgga gaagcagtaa tgagaatggg agacctccac tcactccaaa acagaaacga 660
gaaatggcgg gaacaattag gtcagaagtt tgaagaaata agatggttga ttgaagaagt 720gaaatggcgg gaacaattag gtcagaagtt tgaagaaata agatggttga ttgaagaagt 720
gagacacaaa ctgaaggtaa cagagaatag ttttgagcaa ataacattta tgcaagcctt 780gagacacaaa ctgaaggtaa cagagaatag ttttgagcaa ataacattta tgcaagcctt 780
acatctattg cttgaagtgg agcaagagat aagaactttc tcatttcagc ttatttaa 838acatctattg cttgaagtgg agcaagagat aagaactttc tcatttcagc ttatttaa 838
<210> 9<210> 9
<211> 25<211> 25
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 9<400> 9
atggagaaca tagtacttct tcttg 25atggagaaca tagtacttct tcttg 25
<210> 10<210> 10
<211> 45<211> 45
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 10<400> 10
gccccgaaca ggcctctagt ttctcttaga ggactatttc tgagc 45gccccgaaca ggcctctagt ttctcttaga ggactatttc tgagc 45
<210> 11<210> 11
<211> 31<211> 31
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 11<400> 11
actagaggcc tgttcggggc gatagcaggg t 31actagaggcc tgttcggggc gatagcaggg t 31
<210> 12<210> 12
<211> 25<211> 25
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 12<400> 12
ttaaatgcaa attctgcact gtaac 25ttaaatgcaa attctgcact gtaac 25
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WO2010063033A2 (en) * | 2008-11-28 | 2010-06-03 | Merial Limited | Recombinant avian influenza vaccine and uses thereof |
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KR101908905B1 (en) * | 2016-12-22 | 2018-10-17 | 아이디바이오 주식회사 | Recombinant influenza virus to form cross-protection against multiple subtypes h9 and h5 of influenza viruses and vaccine comprising the same |
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KR102259392B1 (en) * | 2019-11-08 | 2021-06-01 | 서울대학교산학협력단 | H5N8 recombinant influenza virus, a composition for preparing the same, and a vaccine composition containing the same |
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