Detailed Description
The present invention will be further illustrated with reference to the following examples, but the present invention is not limited to the following examples.
Example 1 Synthesis and characterization of oxadiazole hydroxamic acids
In the present embodiment, the first and second electrodes are,1H-NMR was measured with a Bruker AVANCE III HD 600 Mm NMR spectrometer; MS is measured by an Agilent 6440 Triple Quad LC/MS type instrument and is in an ESI mode except for the indication; all solvents are redistilled before use, and the used anhydrous solvents are obtained by drying according to a standard method; all reactions were carried out under argon protection and followed by TLC except for the indication, and the post-treatment was carried out by washing with saturated saline and drying with anhydrous magnesium sulfate; purification of the product except for the indication silica gel 200 and 300 mesh) column chromatography; the silica gel used, including 200-300 mesh and GF254, was produced by Qingdao Seawa silica gel desiccant, Inc.
The specific synthesis steps are as follows:
(a) dissolving p-methoxyaniline (3600 mg and 30 mmol) and bromoacetonitrile in 4 mL of DMF (N-N dimethylformamide), stirring overnight at normal temperature, evaporating the solvent to dryness, and separating the target intermediate compound by silica gel column chromatography;
(b) reacting the compound 3240 mg and 20 mmol) obtained in the step (a) with pimelic anhydride in a dioxane solution, stirring and refluxing at 110 ℃ for 5 hours, evaporating the solvent, extracting with acid and base, evaporating the filtrate, and separating a target intermediate compound by a silica gel column chromatography;
(c) dissolving the compound (4300 mg, 14.2 mmol) obtained in the step (b) with 6 mL of methanol, adding two drops of thionyl chloride, refluxing and stirring at 70 ℃ for 4 h, evaporating the solvent, extracting with EtOAc, performing conventional treatment, and passing through a silica gel column;
(d) dissolving the compound (3000 mg, 9.4 mmol) obtained in the step (c) in a mixed system of ethanol and water, adding hydroxylamine hydrochloride, stirring at normal temperature overnight, evaporating the solvent to dryness, and then passing through a silica gel column to obtain a target intermediate compound;
(e) dissolving the compound (2070 mg and 5.89 mmol) obtained in the step (d) in a mixed system of dioxane and pyridine, slowly adding benzoyl chloride under the protection of nitrogen, stirring and refluxing at 110 ℃ for 4 hours, evaporating the solvent to dryness, extracting with ethyl acetate, evaporating the solvent to dryness again, and passing through a silica gel column;
(f) dissolving the compound (1650 mg, 3.77 mmol) obtained in the step (e) in 10 mL of dichloromethane, slowly adding boron tribromide in an ice bath, stirring at normal temperature for 6 h, adding methanol for inactivation, evaporating the solvent to dryness, and passing through a silica gel column to obtain a target intermediate compound;
g) dissolving the compound (300 mg, 0.71 mmol) obtained in the step (f) in 4 mLDMFN-N dimethylformamide, adding allyl bromide, stirring at 50 ℃ for 6 h, evaporating the solvent, extracting with ethyl acetate, evaporating the solvent again, and purifying with a silica gel column to obtain a target intermediate compound;
(h) reacting hydroxylamine hydrochloride with potassium hydroxide in methanol, filtering to obtain filtrate, dissolving the compound (153 mg, 0.33 mmol) obtained in the step (g) in the filtrate, stirring at 40 ℃ for 5 h, performing conventional treatment, and passing through a silica gel column to obtain a target compound QY 01;
replacing the allyl bromide of step (g) with a different bromine-substituted compound according to this method to produce the remaining compound QY02-QY 13;
the yield, purity and characterization of the compounds QY01-QY13 are as follows.
N1-hydroxy-N7- (4- (2-methoxyethoxy) phenyl) -N7- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 01) yield: 34.9%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.29 (br s, 1H), 8.63 (br s, 1H), 8.09 (d, J = 7.2 Hz, 2H), 7.72 (dd, J = 7.8 Hz, J = 7.2 Hz, 1H), 7.65-7.63 (m, 2H), 7.32-7.30 (m, 2H), 6.98 (d, J = 9.0 Hz, 2H), 4.97 (s, 2H), 4.09 (t, J = 7.2 Hz, 2H), 3.64 (t, J = 4.8 Hz, 2H), 3.29 (s, 3H), 2.03 (t, J = 7.8 Hz, 2H), 1.87 (t, J = 7.2 Hz, 2H), 1.47-1.35 (m, 4H), 1.15-1.10 (m, 2H).
N1-hydroxy-N7- (4- (3-methoxypropoxy) phenyl) -N7- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 02) yield: 41%
1H NMR (600 MHz, DMSO-d 6 ) δ (10.32 br s, 1H), 8.67 (br s, 1H), 8.09 (d, J = 7.2 Hz, 2H), 7.73-7.64 (m, 3H), 7.31 (d, J = 8.4 Hz, 2H), 6.97 (d, J = 9.0 Hz, 2H), 4.97 (s, 2H), 4.09 (t, J = 7.2 Hz, 2H), 3.49-3.44 (m, 2H), 3.23 (s, 3H), 2.06-1.87 (m, 6H), 1.44-1.37 (m, 4H), 1.17-1.12(m, 2H).
3. N1- (4- (2-ethoxyethoxy) phenyl) -N7-hydroxy-N1- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 03) yield: 36.5%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.29 (br s, 1H), 8.63 (br s, 1H), 8.10(d, J = 7.2 Hz, 2H), 7.73-7.70 (m, 1H), 7.65-7.63 (m, 2H), 7.31 (d, J = 8.4 Hz, 2H), 6.99 (d, J = 9.0 Hz, 2H), 4.98 (s, 2H), 4.11-4.08 (m, 2H), 3.64 (t, J = 4.8 Hz, 2H), 3.50-3.47( m, 2H), 3.17 (d, J = 5.4 Hz, 2H), 2.04 (t, J = 7.2 Hz, 2H), 1.88-1.86 (m, 2H), 1.47-1.35( m, 4H), 1.11 (t, J = 6.6 Hz, 3H).
4.N1-hydroxy-N7- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) -N7- (4-propoxyphenyl) pimelinamide (QY 04) yield 42.1%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.30( br s, 1H), 8.64 (br s, 1H), 8.10-7.99 (m, 2H), 7.73-7.56 (m, 3H), 7.37 (d, J = 9.0 Hz, 1H), 7.30(d, J = 9.0 Hz, 1H), 7.01-6.95 (m, 2H), 5.11 (s, 1H), 4.97 (s, 1H), 3.94-3.91 (m, 2H), 2.08-2.02 (m, 2H), 1.87 (t, J = 7.2 Hz, 2H), 1.75-1.69 (m, 2H), 1.47-1.35 (m, 4H), 1.16-1.10 (m, 2H), 0.98-0.95 (m, 3H).
5.N1- (4-butoxyphenyl) -N7-hydroxy-N1- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 05) yield 38.6%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.30(br s, 1H), 8.64 (br s, 1H), 8.09 (d, J = 7.8 Hz, 2H), 7.72-7.70 (m, 1H), 7.65-7.62 (m, 2H), 7.30 (d, J = 9.0 Hz, 2H), 6.96 (d, J = 9.0 Hz, 2H), 4.97 (s, 2H), 2.05-1.98 (m, 2H), 1.87 (t, J = 7.2 Hz, 2H), 1.70-1.65 (m, 2H), 1.47-1.35 (m, 6H), 1.18-1.11 (m, 2H). 0.91 (t, J = 7.2 Hz, 3H).
6.N1-hydroxy-N7- (4-isobutoxyphenyl) -N7- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 06) yield: 43.5%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.30 (br s, 1H), 8.64 (br s, 1H), 8.10 (d, J = 7.8 Hz, 2H), 7.72 (dd, J = 7.2 Hz, J = 7.2 Hz,1H), 7.64-7.58 (m, 2H), 7.31 (d, J = 9.0 Hz, 2H), 6.97 (d, J = 9.0 Hz, 2H), 4.98 (s, 2H), 3.76-3.73 (m, 2H), 2.08-1.99 (m, 3H), 1.88 (t, J = 7.2 Hz, 2H), 1.47-1.36 (m, 4H), 1.16-1.11 (m, 2H), 0.98-0.96 (m, 6H).
7.N1- (4- (allyloxy) phenyl) -N7-hydroxy-N1- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 07) yield 28.4%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.30 (br s, 1H), 8.64 (br s, 1H), 8.10 (d, J = 7.2 Hz, 2H), 7.73-7.70 (m, 1H), 7.65-7.62 (m, 2H), 7.32 (d, J = 9.0 Hz, 2H), 7.00 (d, J = 9.0 Hz, 2H), 6.06-6.00 (m, 1H), 5.39 (d, J = 10.2 Hz, 1H), 5.26 (d, J = 10.2 Hz, 1H), 4.97 (s, 2H), 4.57 (d, J = 5.4 Hz, 2H), 2.03 (t, J = 7.2 Hz, 2H), 1.87 (t, J = 7.2 Hz, 2H), 1.47-1.35 (m, 4H), 1.18-1.11 (m, 2H).
8. N1- (4- (cyclopropylmethoxy) phenyl) -N7-hydroxy-N1- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 08) yield: 32.6%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.30 (br s, 1H), 8.64 (br s, 1H), 8.09 (d, J = 7.8 Hz, 2H), 7.72-7.70 (m, 2H), 7.65-7.56 (m, 2H), 7.30 (d, J = 9.0 Hz, 2H), 6.96 (t, J = 9.0 Hz, 2H), 4.97 (s, 2H), 3.81 (d, J = 3.0 Hz, 2H), 2.08-2.02 (m, 2H), 1.87 (t, J = 7.2 Hz, 2H), 1.46-142 (m, 2H), 1.39-1.35 (m, 2H), 1.22-1.18 (m, 1H), 1.17-1.10 (m, 2H). 0.57-0.54 (m, 2H), 0.32-0.29 (m, 2H).
9. N1-hydroxy-N7- (4- (2-morpholinoethoxy) phenyl) -N7- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 09) yield: 43.5%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.29 (br s, 1H), 8.63 (br s, 1H), 8.10(d, J = 7.2 Hz, 2H), 7.73-7.70 (m, 1H), 7.65-7.63 (m, 2H), 7.31 (d, J = 9.0 Hz, 2H), 6.99 (d, J = 9.0 Hz, 2H), 4.97 (s, 2H), 4.10-4.07 (m, 2H), 3.56 (t, J = 4.2 Hz, 4H), 3.17 (d, J = 5.4 Hz, 1H), 2.67 (t, J = 5.4 Hz, 2H), 2.45 (s, 4H), 2.03 (t,J = 7.2 Hz, 2H), 1.87 (t, J = 7.2 Hz, 2H), 1.47-1.35 (m, 4H), 1.15-1.11 (m, 2H).
10.N1- (4- (cyclohexylmethoxy) phenyl) -N7-hydroxy-N1- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 10) yield: 48.7%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.30 (br s, 1H), 8.09 (d, J = 7.8 Hz, 2H), 7.72-7.70 (m, 1H),7.65-7.56 (m, 2H), 7.30 (d, J = 9.0 Hz, 2H), 6.96 (d, J = 9.0 Hz,2H), 4.97 (s, 2H), 3.78-3.75 (m, 2H), 2.08-2.02 (m, 2H), 1.91-1.86 (m,2H), 1.78 (d, J = 12.0 Hz, 2H), 1.69 (t, J = 9.6 Hz, 3H), 1.63 (d, J = 12.6 Hz, 1H), 1.47-1.35 (m, 4H), 1.26-1.10 (m, 5H), 1.09-0.99 (m, 2H).
11. N1-hydroxy-N7- (4- (((4-methylbenzyl) oxy) phenyl) -N7- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelinamide (QY 11) yield 39.1%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.31 (br s, 1H), 8.66 (br s, 1H), 8.09 (d, J = 7.2 Hz, 2H), 7.72-7.70 (m, 1H), 7.65-7.62(m, 2H), 7.45 (d, J = 7.2 Hz, 2H), 7.40-7.37 (m, 2H), 7.34-7.32 (m, 3H), 7.06 (d, J = 9.0 Hz, 2H), 5.09 (s, 2H), 4.98 (s, 2H), 2.04 (t, J = 7.2 Hz, 2H), 1.88 (t, J = 7.2 Hz, 2H), 1.47-1.42 (m, 2H), 1.40-1.35 (m, 2H), 1.15-1.10 (m, 2H).
12.N1-hydroxy-N7- (4- ((4-methylbenzyl) oxy) phenyl) -N7- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 12) yield: 40.2%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.32 (br s, 1H), 8.67 (br s, 1H), 8.09 (d, J = 7.2 Hz, 2H), 7.72-7.69 (m, 1H), 7.64-7.61 (m, 2H), 7.33-7.31 (m, 4H), 7.18 (d, J = 7.8 Hz, 2H), 7.04 (d, J = 9.0 Hz, 2H), 5.03 (s, 2H), 4.97 (s, 2H), 2.29 (s, 3H), 2.04 (t, J = 7.2 Hz, 2H), 1.88 (t, J = 7.2 Hz, 2H), 1.47-1.36 (m, 4H), 1.18-1.10 (m, 2H).
13.N1- (4- ((3-bromobenzyl) oxy) phenyl) -N7-hydroxy-N1- ((5-phenyl-1, 2, 4-oxadiazol-3-yl) methyl) pimelide (QY 13) yield: 41.4%
1H NMR (600 MHz, DMSO-d 6 ) δ 10.30 (br s, 1H), 8.64 (br s, 1H), 8.09 (d, J = 7.2 Hz, 2H), 7.73-7.70 (m, 1H), 7.66-7.62 (m, 3H), 7.60-7.56 (m, 1H), 7.54-7.52 (m, 1H) ,7.46 (d, J = 7.8 Hz, 1H) , 7.41-7.33 (m, 3H), 7.07 (d, J = 9.0 Hz, 2H), 5.12 (d, J = 8.4 Hz, 2H), 4.98 (s, 2H), 2.09-2.03 (m, 2H), 1.89-1.86 (m, 2H), 1.47-1.35 (m, 4H), 1.17-1.10 (m, 2H)。
EXAMPLE 2 inhibition of HDAC1 enzymatic Activity by Compounds QY01-QY13
Using Ac-Lys-Tyr-LysAc) -AMC as a substrate, and adopting a fluorescence detection method to detect the enzyme activity in a 96-hole or 384-hole flat-bottom microplate: after deacetylation of substrate Ac-Lys-Tyr-LysAc) -AMC by HDAC1, product AMC obtained by hydrolysis with pancreatin emitted 460nm fluorescence under 355nm excitation by a fluorescence detector. The intensity of fluorescence is influenced after the inhibitor is added, the initial reaction speed is calculated by detecting the change of a fluorescence signal along with time, and IC is calculated50The results are shown in table 1, using SAHA as a positive control:
inhibition of HDAC1 by the compounds QY01-QY13 of Table 1
From table 1, it can be seen that the compound QY01-13 has certain inhibitory activity on HDAC1, and is significantly superior to SAHA, and particularly, the inhibitory activity of QY07 is 10 times higher than SAHA.