CN112017152B - Processing method of two-dimensional image of atrial impression - Google Patents
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Abstract
Description
技术领域technical field
本发明涉及一种心脏二维影像的处理方法,属于心脏医学图像处理领域。The invention relates to a method for processing two-dimensional images of the heart, and belongs to the field of cardiac medical image processing.
背景技术Background technique
当心脏发生心房颤动时,因心房收缩不规律,导致左心房内的压力难以通过超声等无创方法评估。由于左心房前壁压迹由心房内压力决定,因此通过分析和处理左心房的结构图像、量化左心房前壁压迹可以估测左心房内压力,并且,在房颤状态下,可用压迹曲线对左心房内压力进行分析,压迹曲线的曲率可进一步用于对左心房的关键结构作定量分析。When atrial fibrillation occurs in the heart, the pressure in the left atrium is difficult to assess by non-invasive methods such as ultrasound due to irregular atrial contractions. Since the left atrial anterior wall indentation is determined by the intra-atrial pressure, the left atrial pressure can be estimated by analyzing and processing the structural image of the left atrium, quantifying the left atrial anterior wall indentation, and, in the state of atrial fibrillation, the available indentation The curve analyzes the pressure in the left atrium, and the curvature of the indentation curve can be further used to quantify the key structures of the left atrium.
目前研究左心房形态结构的机构以美国Utah大学计算科学与图像研究所为代表,但其分析的是左心房的三维结构图像,并且分析与图像处理方法相对复杂,未能普遍推广。At present, the institutions that study the morphological structure of the left atrium are represented by the Institute of Computational Science and Imaging of the University of Utah in the United States, but it analyzes the three-dimensional structural images of the left atrium, and the analysis and image processing methods are relatively complex and cannot be widely promoted.
发明内容SUMMARY OF THE INVENTION
针对现有技术的缺陷,本发明所要解决的技术问题是:提供一种简单易行的心房压迹二维影像的处理方法,以获得左心房的压迹曲线。Aiming at the defects of the prior art, the technical problem to be solved by the present invention is to provide a simple and easy processing method for a two-dimensional image of atrial indentation, so as to obtain the indentation curve of the left atrium.
本发明解决其技术问题所采用的技术手段是:本发明心房压迹二维影像的处理方法包括如下步骤:The technical means adopted by the present invention to solve its technical problems are: the processing method of the two-dimensional image of atrial impression in the present invention comprises the following steps:
(1)从位于动脉窦根部水平切面的左心房二维影像中选取一幅作为感兴趣帧,在所述感兴趣帧中,主动脉瓣清晰可见且心房压迹明显;(1) Select a frame of interest from a two-dimensional image of the left atrium in the horizontal section of the root of the arterial sinus, in which the aortic valve is clearly visible and the atrial indentation is obvious;
(2)提取所述感兴趣帧中左心房的前景边界和左心房的中心点,并识别前景边界中的关键拐点;(2) extracting the foreground boundary of the left atrium and the center point of the left atrium in the frame of interest, and identifying key inflection points in the foreground boundary;
(3)根据前景边界中的关键拐点和左心房的中心点的位置,定位围绕左心房的拐点;(3) According to the position of the key inflection point in the foreground boundary and the center point of the left atrium, locate the inflection point around the left atrium;
(4)根据围绕左心房的拐点提取左心房边界,得到左心房的压迹曲线。(4) Extract the boundary of the left atrium according to the inflection point around the left atrium, and obtain the indentation curve of the left atrium.
进一步地,本发明在所述步骤(2)中,采用基于亚像素的边界提取方法识别左心房与其他心脏腔室之间的弱边界,获得包括弱边界在内的左心房的前景边界。Further, in the step (2) of the present invention, a subpixel-based boundary extraction method is used to identify the weak boundary between the left atrium and other cardiac chambers, and obtain the foreground boundary of the left atrium including the weak boundary.
进一步地,本发明在提取所述感兴趣帧中左心房的前景边界之前,采用sobel算子提取所述感兴趣帧中左心房的边界分布。Further, in the present invention, before extracting the foreground boundary of the left atrium in the frame of interest, the sobel operator is used to extract the boundary distribution of the left atrium in the frame of interest.
进一步地,本发明在所述步骤(2)中,采用CPDA法识别前景边界中的关键拐点。Further, in the step (2) of the present invention, the CPDA method is used to identify the key inflection points in the foreground boundary.
进一步地,本发明在所述步骤(2)中,采用迭代算法提取左心房的中心点。Further, in the step (2) of the present invention, an iterative algorithm is used to extract the center point of the left atrium.
进一步地,本发明在所述步骤(4)中,采用样条插值法补全左心房缺失的边界。Further, in the step (4) of the present invention, the spline interpolation method is used to complete the missing boundary of the left atrium.
进一步地,本发明在所述步骤(4)中,对左心房边界进行平滑。Further, in the step (4) of the present invention, the boundary of the left atrium is smoothed.
进一步地,本发明对所述压迹曲线进行平滑。Further, the present invention smoothes the indentation curve.
进一步地,本发明对所述压迹曲线进行平滑的方式为多项式插值。Further, the method for smoothing the indentation curve in the present invention is polynomial interpolation.
进一步地,本发明计算平滑后的压迹曲线的曲率。Further, the present invention calculates the curvature of the smoothed indentation curve.
与现有技术相比,本发明的有益效果是:Compared with the prior art, the beneficial effects of the present invention are:
现有技术基于左心房的三维结构图像,图像处理方法相对复杂,难以在实践中广泛应用。而本发明通过对左心房的二维影像进行分析和处理来获得左心房的压迹曲线,且图像处理方法简单易行,能够被广泛利用;并且,本发明基于左心房的二维影像获得左心房的压迹曲线,由此利用压迹曲线,通过量化左心房前壁压迹来估测左心房内压力,实现了在房颤状态下使用无创方法对左心房内压力进行分析;此外,左心房的压迹曲线的曲率可进一步被用于对左心房的关键结构进行定量分析。The prior art is based on a three-dimensional structural image of the left atrium, and the image processing method is relatively complicated, which is difficult to be widely applied in practice. The present invention obtains the indentation curve of the left atrium by analyzing and processing the two-dimensional image of the left atrium, and the image processing method is simple and easy to implement, and can be widely used; Atrial indentation curve, whereby the indentation curve is used to estimate the left atrial pressure by quantifying the left atrial anterior wall indentation, and the non-invasive method to analyze the left atrial pressure in the state of atrial fibrillation is realized; The curvature of the indentation curve of the atrium can further be used to quantify key structures of the left atrium.
附图说明Description of drawings
图1是本发明心房压迹二维影像的处理方法的流程示意图。FIG. 1 is a schematic flowchart of a method for processing a two-dimensional image of atrial impression in the present invention.
图2是利用本发明处理方法对左心房的二维影像进行处理时的状态图,其中,A为基于亚像素的边界提取法提取左心房的前景边界的结果;B为前景边界中的关键拐点的提取结果;C为围绕左心房的拐点的定位结果;D为提取到的左心房边界;E为所截取的用于计算曲率的一段压迹曲线;F为采用多项式插值法平滑后的压迹曲线段。Fig. 2 is a state diagram when the two-dimensional image of the left atrium is processed by the processing method of the present invention, wherein A is the result of extracting the foreground boundary of the left atrium based on the sub-pixel boundary extraction method; B is the key inflection point in the foreground boundary C is the positioning result of the inflection point around the left atrium; D is the extracted left atrium boundary; E is a segment of the indentation curve intercepted for calculating the curvature; F is the indentation smoothed by polynomial interpolation Curve segment.
图3是左心房压迹的三种典型图,由图A至图C,左心房的压迹曲线的曲率逐渐变小。Figure 3 shows three typical graphs of left atrial indentation. From Figure A to Figure C, the curvature of the indentation curve of the left atrium gradually decreases.
具体实施方式Detailed ways
下面结合附图和具体实施例对本发明作进一步说明,但本发明并不仅仅限于这些实施例。The present invention will be further described below with reference to the accompanying drawings and specific embodiments, but the present invention is not limited to these embodiments.
如图1至图3所示,本发明心房压迹二维影像的处理方法包括如下步骤:As shown in FIG. 1 to FIG. 3 , the processing method of the two-dimensional image of atrial impression in the present invention includes the following steps:
一、从位于动脉窦根部水平切面的左心房二维影像中,选取一幅作为感兴趣帧,所述感兴趣帧中主动脉瓣清晰可见,且心房压迹明显。具体说明如下:1. From the two-dimensional image of the left atrium in the horizontal section of the root of the arterial sinus, select a frame of interest, in which the aortic valve is clearly visible and the atrial indentation is obvious. The specific instructions are as follows:
本发明优选使用左心房的CT或MRI图像,以下以CT影像为例进行说明。所采集的图像为左心房的动脉窦根部的水平切面的二维影像,采集时以同一心电周期的图像为佳,并从中选择一幅作为感兴趣帧。在所选取的感兴趣帧中,主动脉瓣应清晰可见且心房压迹明显,主动脉瓣和压迹越清晰明显越好。In the present invention, CT or MRI images of the left atrium are preferably used, and CT images are used as an example for description below. The acquired image is a two-dimensional image of the horizontal section of the root of the sinus of the left atrium. The images of the same ECG cycle are preferred during acquisition, and one of them is selected as the frame of interest. In the selected frame of interest, the aortic valve should be clearly visible and the atrial indentation is obvious. The clearer the aortic valve and the indentation are, the better.
二、提取感兴趣帧中的左心房的前景边界和左心房的中心点,并识别前景边界中的拐点。具体说明如下:2. Extract the foreground boundary of the left atrium and the center point of the left atrium in the frame of interest, and identify the inflection point in the foreground boundary. The specific instructions are as follows:
(一)提取感兴趣帧中的左心房的前景边界(1) Extract the foreground boundary of the left atrium in the frame of interest
为了客观反映左心房的形态结构特性,相对于现有技术,本发明首次引入了边界提取技术。在提取感兴趣帧中的左心房前景边界之前,可采用二值化法去除CT断层图像的背景,对感兴趣帧进行预处理,具体包括两个步骤:(1)首先利用snake模型进行演化,去除较为明显的胸骨部分;(2)而后以前景中心为种子点,利用区域生长模型去除与前景不黏连的噪声区域。预处理后的图像包括左心房、左心室、右心房和右心室流出道及主动脉根部等心脏腔室,统称为前景。In order to objectively reflect the morphological and structural characteristics of the left atrium, compared with the prior art, the present invention introduces the boundary extraction technology for the first time. Before extracting the left atrial foreground boundary in the frame of interest, the background of the CT tomographic image can be removed by the binarization method, and the frame of interest can be preprocessed, which includes two steps: (1) First, use the snake model to evolve, Remove the more obvious part of the sternum; (2) Then take the foreground center as the seed point, and use the region growing model to remove the noise region that is not adhered to the foreground. The preprocessed image includes the left atrium, left ventricle, right atrium and right ventricular outflow tract, and heart chambers such as the aortic root, collectively referred to as the foreground.
由于左心房和其他心脏腔室之间灰度相近、纹理相似,边界比较模糊,本发明优选采用基于亚像素的边界提取方法识别左心房与其他心脏腔室之间的弱边界,获得包括弱边界在内的左心房的前景边界。具体如下:Since the grayscale and texture between the left atrium and other cardiac chambers are similar, and the boundary is relatively blurred, the present invention preferably adopts a subpixel-based boundary extraction method to identify the weak boundary between the left atrium and other cardiac chambers, and obtains the weak boundary between the left atrium and other cardiac chambers. Inside the foreground border of the left atrium. details as follows:
亚像素能在单个像素内部诊断边界位置,假设边界线横穿单个像素,则该像素的灰度Fi,j可表示为公式(1),其中A和B分别代表边界两侧的像素灰度值,而SA和SB分别代表边界两侧的像素灰度对应的面积。The subpixel can diagnose the boundary position within a single pixel. Assuming that the boundary line traverses a single pixel, the grayscale F i,j of the pixel can be expressed as formula (1), where A and B represent the pixel grayscales on both sides of the boundary, respectively. value, and S A and S B respectively represent the area corresponding to the pixel gray level on both sides of the boundary.
作为本发明的优选方案,在利用亚像素算法进行感兴趣帧中左心房的前景边界提取之前,可先采用sobel算子提取感兴趣帧中左心房的边界分布。基于该分布情况,假设一条曲线C(x1,x2...xN)横穿像素(i,j),为估计曲线参数。为此,构造了一个中心点位于像素(i,j)的掩膜,并计算掩膜内每一列像素的灰度之和(如公式(2)所示)。其中,公式(2)中掩膜S的下标L,M,R分别代表掩膜内的左、中、右列,r代表掩膜半径。As a preferred solution of the present invention, before using the sub-pixel algorithm to extract the foreground boundary of the left atrium in the frame of interest, the sobel operator may be used to extract the boundary distribution of the left atrium in the frame of interest. Based on this distribution, it is assumed that a curve C(x 1 , x 2 ... x N ) traverses the pixel (i, j), which is the estimated curve parameter. To this end, a mask with the center point at pixel (i, j) is constructed, and the sum of the gray levels of each column of pixels in the mask is calculated (as shown in formula (2)). Among them, the subscripts L, M, and R of the mask S in the formula (2) represent the left, middle, and right columns in the mask, respectively, and r represents the mask radius.
在公式(2)中带入公式(1),则公式(2)中只包含变量A、B和SA、SB。此外,A和B的值可由周围像素的近似产生,SA和SB与曲线在该像素内的倾斜程度有关,可采用曲线参数表示。故而曲线参数可由公式(2)求解。利用上述掩膜遍历图像,可获得包括弱边界在内的左心房的前景边界位置(如图2A所示)。When formula (1) is introduced into formula (2), only variables A, B and S A and S B are included in formula (2). In addition, the values of A and B can be generated by the approximation of the surrounding pixels, and S A and S B are related to the slope of the curve within the pixel, which can be expressed by curve parameters. Therefore, the curve parameters can be solved by formula (2). Using the above mask to traverse the image, the position of the foreground boundary of the left atrium including the weak boundary can be obtained (as shown in Figure 2A).
(二)识别前景边界中的关键拐点(2) Identify the key inflection points in the foreground boundary
由亚像素算法诊断的前景边界中包括左心房边界和其他组织的黏连边界。为了区分不同组织的边界位置,本发明可采用一种有效的拐点诊断算法,称为CPDA法。通过该方法检测拐点位置,进而识别前景边界中的关键拐点。由此,将提取左心房的边界位置的问题可以转换为提取左心房的边界附近的拐点问题。The borders of the left atrium and adhesions of other tissues were included in the foreground borders diagnosed by the subpixel algorithm. In order to distinguish the boundary positions of different tissues, the present invention can adopt an effective inflection point diagnosis algorithm, called CPDA method. Through this method, the position of the inflection point is detected, and then the key inflection point in the foreground boundary is identified. Thus, the problem of extracting the boundary position of the left atrium can be transformed into the problem of extracting the inflection point near the boundary of the left atrium.
CPDA的英文全称为chord-to-point distance accumulation,它计算曲线上每个点和它对应的弧形线段的垂线距离,弧形线段沿边界移动得到点对弧的距离累积,而后基于该距离累积量计算曲率值,确定拐点位置。与传统的基于曲率尺度空间的拐点定位方法相比,CPDA法不直接计算曲线上任一点的导数,故而对于曲线局部变化及噪声点的鲁棒性较好。前景边界中的关键拐点的识别结果如图2B所示。The full English name of CPDA is chord-to-point distance accumulation. It calculates the vertical distance between each point on the curve and its corresponding arc segment. The arc segment moves along the boundary to obtain the point-to-arc distance accumulation, and then based on the distance The cumulant calculates the curvature value and determines the position of the inflection point. Compared with the traditional inflection point localization method based on the curvature scale space, the CPDA method does not directly calculate the derivative of any point on the curve, so it is more robust to local changes of the curve and noise points. The identification results of key inflection points in the foreground boundary are shown in Fig. 2B.
(三)本发明可采用迭代算法寻找左心房的中心点。(3) The present invention can use an iterative algorithm to find the center point of the left atrium.
三、根据前景边界中的关键拐点和左心房的中心点的位置,定位围绕左心房的拐点3. Locate the inflection point around the left atrium according to the position of the key inflection point in the foreground boundary and the center point of the left atrium
以找到的左心房的中心点为原点,统计前景边界中的每个关键拐点与原点之间的欧氏距离。假设所有关键拐点的欧式距离服从(μ,σ)的正态分布,则舍弃落在(μ-σ,μ+σ)区间之外的拐点,形成新的拐点集。以新的拐点集得到新的图像中心,形成新的原点,开始新一轮的迭代过程。上述迭代执行两次,得到左心房附近的关键点(即围绕左心房的拐点)(如图2C所示)。Taking the found center point of the left atrium as the origin, the Euclidean distance between each key inflection point in the foreground boundary and the origin is counted. Assuming that the Euclidean distances of all key inflection points obey the normal distribution of (μ, σ), then discard the inflection points outside the (μ-σ, μ+σ) interval to form a new inflection point set. A new image center is obtained with a new set of inflection points to form a new origin, and a new round of iterative process begins. The above iteration is performed twice to obtain key points near the left atrium (ie, the inflection point around the left atrium) (as shown in Figure 2C).
四、根据围绕左心房的拐点提取左心房边界,得到左心房的压迹曲线4. Extract the boundary of the left atrium according to the inflection point around the left atrium, and obtain the impression curve of the left atrium
以顺时针方向,识别围绕左心房的拐点附近的边界点。对于小范围缺失的边界位置,可采用样条插值方法补全。最后,采用形态学操作使左心房的边界平滑,平滑后的边界位置如图2D所示。若平滑后的边界位置存在偏差,则可用人机交互的方式微调边界位置。由此,得到左心房的压迹曲线。In a clockwise direction, identify the boundary points around the inflection point of the left atrium. For the missing boundary position in a small range, the spline interpolation method can be used to complete it. Finally, morphological operations were used to smooth the boundary of the left atrium, and the position of the smoothed boundary is shown in Figure 2D. If there is a deviation in the smoothed boundary position, the boundary position can be fine-tuned by means of human-computer interaction. Thus, the indentation curve of the left atrium is obtained.
五、进一步地,可按以下方法获得左心房压迹曲线的曲率V. Further, the curvature of the left atrial indentation curve can be obtained by the following method
截取左心房的压迹曲线,其起始点和终点可手动标注(如图2E所示)。对所截取的压迹曲线计算曲率。曲率是指针对曲线上某个点的切线方向角对弧长的转动率,其计算方法如以下公式(3)所示:The indentation curve of the left atrium was intercepted, and its start and end points could be marked manually (as shown in Figure 2E). The curvature is calculated for the intercepted indentation curve. Curvature refers to the rotation rate of the tangent direction angle to a point on the curve to the arc length, and its calculation method is shown in the following formula (3):
公式(3)中,k表示压迹曲线的曲率,y’和y”分别表示压迹曲线的一阶及二阶导数。In formula (3), k represents the curvature of the indentation curve, and y' and y" represent the first-order and second-order derivatives of the indentation curve, respectively.
由公式(3)可知,曲率的绝对值会随着曲线的弯曲程度的增加而增大。此外,曲率的数值符号取决于曲线的属性:凸曲线对应的曲率为正值,凹曲线对应的曲率为负值。It can be seen from formula (3) that the absolute value of the curvature will increase with the increase of the degree of curvature of the curve. In addition, the numerical sign of the curvature depends on the properties of the curve: convex curves correspond to positive curvatures, and concave curves correspond to negative curvatures.
由于像素点离散地分布于压迹曲线上,故而直接计算压迹曲线的曲率会出现较大的波动性。优选地,在正式计算曲率之前,可采用多项式插值的方式对所截取的压迹曲线进行平滑。多项式插值计算效率较高,且能充分表达压迹曲线的分布情况,其表达式如公式(4)所示,平滑前、后的压迹曲线段如图2F所示。Since the pixel points are discretely distributed on the indentation curve, the direct calculation of the curvature of the indentation curve will have large fluctuations. Preferably, before the curvature is formally calculated, the intercepted indentation curve can be smoothed by means of polynomial interpolation. The calculation efficiency of polynomial interpolation is high, and it can fully express the distribution of the indentation curve. Its expression is shown in formula (4). The indentation curve segments before and after smoothing are shown in Figure 2F.
y=p1xn+p2xn-1+...+pnx1+pn+1,where n=2 (4)y=p 1 x n +p 2 x n-1 +...+p n x 1 +p n+1 , where n=2 (4)
公式(4)中,y为拟合曲线,x为拟合自变量,p代表各阶多项式的系数。In formula (4), y is the fitting curve, x is the fitting independent variable, and p represents the coefficient of each order polynomial.
利用本发明的心房压迹二维图像处理方法对169例左心房的CT图像进行处理,相应得到169例左心房压迹图。左心房内的压力通常为10mmHg以内,超过此值即为左心房内压力升高,由此可引起左心房前壁压迹变浅,乃至消失。根据该169例左心房压迹图的压迹曲线的共性可将它们分为三类,图3的A、B、C分别为这三类左心房压迹曲线的典型图。由图3的A至C示出了左心房内压力从正常到升高的过程中,伴随着心房压迹曲线变平,乃至向前凸出。The CT images of 169 cases of left atrium were processed by using the two-dimensional image processing method of atrial indentation of the present invention, and 169 cases of left atrial indentation images were obtained correspondingly. The pressure in the left atrium is usually within 10mmHg, and if it exceeds this value, the pressure in the left atrium increases, which can cause the pressure trace on the anterior wall of the left atrium to become shallow or even disappear. According to the commonness of the impression curves of the 169 cases of left atrial indentation, they can be divided into three types, A, B, and C of Figure 3 are typical diagrams of the three types of left atrial indentation curves, respectively. From A to C of FIG. 3 , it is shown that the pressure in the left atrium changes from normal to elevated, with the atrial impression curve flattening and even bulging forward.
使用多项式插值法对169例左心房压迹图中所截取的各压迹曲线进行平滑后,分别计算图3的A、B、C三类左心房压迹曲线的平均曲率,结果显示,图3由A至C所示的三类压迹曲线的平均曲率逐渐变小,分别为-2.6(-3.55,-1.95)×10-3、-1.40(-2.13,-0.43)×10-3、0.51(0.02,1.40)×10-3,由此,实现了左心房压迹的量化,可用于后续对左心房的关键结构进行定量分析。After smoothing the indentation curves intercepted from the 169 left atrial indentation images using polynomial interpolation, the average curvatures of the three types of left atrial indentation curves of A, B, and C in Figure 3 were calculated respectively. The results are shown in Figure 3 The average curvatures of the three types of indentation curves shown from A to C gradually become smaller, respectively -2.6(-3.55,-1.95)×10 -3 , -1.40(-2.13,-0.43)×10 -3 , 0.51 (0.02,1.40)×10 -3 , thus, the quantification of the left atrial indentation is achieved, which can be used for subsequent quantitative analysis of the key structures of the left atrium.
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