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CN110878301A - A sgRNA guide sequence specifically targeting mouse G6pc gene and its application - Google Patents

A sgRNA guide sequence specifically targeting mouse G6pc gene and its application Download PDF

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CN110878301A
CN110878301A CN201911070458.3A CN201911070458A CN110878301A CN 110878301 A CN110878301 A CN 110878301A CN 201911070458 A CN201911070458 A CN 201911070458A CN 110878301 A CN110878301 A CN 110878301A
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付灿
于鸿浩
岳鹏鹏
李勇
农月娟
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Abstract

The invention discloses a sgRNA guide sequence of a specific target mouse G6pc gene and application thereof, belonging to the technical field of medical genetics and molecular biology. The nucleotide sequence corresponding to the sgRNA contains a sequence shown in SEQ ID NO.2, and the invention also discloses a method for editing the mouse G6pc gene by using the sgRNA guide sequence of the specific target mouse G6pc gene. The sgRNA guide sequence disclosed by the invention can mediate Cas9 protein, efficiently cuts target DNA, and is further used for editing mouse G6pc gene and influencing the function of mouse G6pc gene encoding protein. The sgRNA guide sequence can realize high-efficiency targeting through a CRISPR/Cas9 system, and the efficiency is 100%.

Description

一种特异靶向小鼠G6pc基因的sgRNA导向序列及其应用A sgRNA guide sequence specifically targeting mouse G6pc gene and its application

技术领域technical field

本发明涉及一种特异靶向小鼠G6pc基因的sgRNA导向序列及其应用,属于医学遗传学和分子生物学技术领域。The invention relates to a sgRNA guide sequence specifically targeting mouse G6pc gene and its application, belonging to the technical fields of medical genetics and molecular biology.

背景技术Background technique

成簇规律间隔短回文重复序列(Clustered regularly interspaced shortpalindromic repeats,associated RNA guided endonuclease Cas,CRISPR/Cas)是细菌和古细菌在长期进化过程中形成的抵御外来遗传物质的获得性免疫防御系统。其中,II型CRISPR/Cas9系统结构较为简单,通过基因工程改造,被广泛用于各个物种的基因编辑。该系统包含Cas9蛋白和sgRNA两个元件,sgRNA通过碱基互补配对的方式靶向结合在基因组DNA长度约为20nt的互补序列上,介导Cas9蛋白的HNH活性位点和RuvC活性位点切割DNA双链,导致DNA双链断裂。细胞通过非同源末端连接或同源重组的方式修复DNA双链断裂损伤,修复时核苷酸会在断裂处随机的插入或缺失或同源重组插入,导致修复后的序列与原序列并不完全一致,进而达到基因编辑的目的。与ZFN和TALENs相比,CRISPR-Cas9具有更快速、简便、高效、多位点、特异性靶向敲除基因的优势。Clustered regularly interspaced short palindromic repeats (Clustered regularly interspaced short palindromic repeats, associated RNA guided endonuclease Cas, CRISPR/Cas) is an acquired immune defense system against foreign genetic material formed in bacteria and archaea during long-term evolution. Among them, the type II CRISPR/Cas9 system has a relatively simple structure and is widely used in gene editing of various species through genetic engineering. The system consists of two elements, Cas9 protein and sgRNA. The sgRNA targets and binds to the complementary sequence of about 20 nt in length of genomic DNA through base complementary pairing, and mediates the cleavage of DNA by the HNH active site and RuvC active site of Cas9 protein. Double strands, resulting in DNA double-strand breaks. Cells repair DNA double-strand breaks by means of non-homologous end joining or homologous recombination. During repair, nucleotides will be randomly inserted or deleted at the break or inserted by homologous recombination, resulting in the repaired sequence and the original sequence. Completely consistent, and then achieve the purpose of gene editing. Compared with ZFNs and TALENs, CRISPR-Cas9 has the advantages of more rapid, simple, efficient, multi-site and specific targeted knockout of genes.

sgRNA,即single guide RNA的简称,中文名称为向导RNA。Cas9靶向切割DNA是通过两种小RNA--crRNA(CRISPR RNA)和tracrRNA(transactivating crRNA)和靶序列互补识别的原理实现的。现在已经把两种小RNA融合成一条RNA链,简称sgRNA(single guideRNA)。因此,sgRNA能否做到高效靶向目标基因是CRISPR-Cas9能否特异性编辑目标基因的先决条件,尤其是基因敲除和基因敲入,sgRNA的高效性对其影响至关重要。因此,能够设计、制备出高效靶向目标基因的sgRNA是基于CRISPR-Cas9系统进行基因编辑的关键。sgRNA, the abbreviation of single guide RNA, the Chinese name is guide RNA. The targeted cleavage of DNA by Cas9 is achieved by the principle of complementary recognition of two small RNAs-crRNA (CRISPR RNA) and tracrRNA (transactivating crRNA) and target sequences. Now two kinds of small RNAs have been fused into one RNA strand, referred to as sgRNA (single guideRNA). Therefore, whether sgRNA can efficiently target target genes is a prerequisite for whether CRISPR-Cas9 can specifically edit target genes, especially for gene knockout and gene knock-in, and the high efficiency of sgRNA is crucial to its impact. Therefore, the ability to design and prepare sgRNAs that efficiently target target genes is the key to gene editing based on the CRISPR-Cas9 system.

人G6PC基因编码葡萄糖-6-磷酸酶(G6Pase)。G6Pase是一种水解磷酸化合物的磷酸酶,主要在肝组织中表达,可以将葡糖-6-磷酸水解为葡萄糖,促使葡萄糖进入血液,从而调控血糖浓度,维持血糖平衡,是糖代谢的关键酶。G6PC基因突变后可导致蛋白功能失常,引起Ⅰ型糖原贮积病。本病为常染色体隐性遗传,两性均可罹病。临床症状表现为葡萄糖稳态受损、空腹低血糖、生长迟缓、肝肿大、肾病、高脂血症、高尿酸血症和乳酸血症等,目前尚无良好治疗方法。The human G6PC gene encodes glucose-6-phosphatase (G6Pase). G6Pase is a phosphatase that hydrolyzes phosphate compounds. It is mainly expressed in liver tissue. It can hydrolyze glucose-6-phosphate into glucose and promote glucose into the blood, thereby regulating blood glucose concentration and maintaining blood glucose balance. It is a key enzyme in glucose metabolism. . Mutations in the G6PC gene can lead to protein dysfunction, causing type I glycogen storage disease. The disease is autosomal recessive and can be affected by both sexes. Clinical symptoms include impaired glucose homeostasis, fasting hypoglycemia, growth retardation, hepatomegaly, nephropathy, hyperlipidemia, hyperuricemia, and lactic acidemia.

G6pc基因突变是人类I型糖原贮积症的主要病因,其突变具有多种类型,包括点突变、同义突变、无义突变和错义突变,不同的突变引起的临床症状不同,有些不患病,有些患病,患病程度亦不相同。因此,有必要筛查明确的、典型的G6PC致病突变位点,并将突变位点定位于小鼠基因组上,然后通过CRISPR/Cas9系统对该位点进行打靶,可以建立G6pc基因突变细胞模型或动物模型,从而精准的模拟I型糖原贮积病,为深入的理解G6PC基因的致病机制以及探索可行的治疗策略具有重要意义。然而,目前并没有针对小鼠G6pc基因的sgRNA导向序列以及敲除该基因的方法。鉴于此,有必要提供一种可以模拟人类致病突变的特异靶向小鼠G6pc基因的sgRNA导向序列及利用其特异性敲除G6pc基因的方法,以解决现有技术的不足。G6pc gene mutation is the main cause of human type I glycogen storage disease. There are many types of mutations, including point mutation, synonymous mutation, nonsense mutation and missense mutation. Different mutations cause different clinical symptoms, some of which are different. Disease, some disease, the degree of disease is not the same. Therefore, it is necessary to screen for a clear and typical G6PC pathogenic mutation site, locate the mutation site on the mouse genome, and then target the site through the CRISPR/Cas9 system to establish a G6pc gene mutation cell model Or animal models, so as to accurately simulate type I glycogen storage disease, which is of great significance for in-depth understanding of the pathogenic mechanism of G6PC gene and the exploration of feasible treatment strategies. However, there is currently no sgRNA guide sequence for the mouse G6pc gene and no method for knocking out the gene. In view of this, it is necessary to provide a sgRNA guide sequence that can simulate human pathogenic mutations and specifically target the mouse G6pc gene and a method for using it to specifically knock out the G6pc gene, so as to solve the deficiencies of the existing technology.

发明内容SUMMARY OF THE INVENTION

本发明的目的之一,是提供一种特异靶向小鼠G6pc基因的sgRNA导向序列。本发明的sgRNA导向序列,是参考人类G6PC基因的致病突变位点,然后将该位点定位于小鼠G6pc基因上,根据定位的位点DNA序列而设计的。本发明的sgRNA导向序列可以介导Cas9蛋白,高效、特异性地切割靶点DNA,进而用于编辑小鼠G6pc基因,影响小鼠G6pc基因编码蛋白的功能。该sgRNA导向序列可以通过CRISPR/Cas9系统实现高效打靶,效率为100%。One of the objectives of the present invention is to provide a sgRNA guide sequence that specifically targets the mouse G6pc gene. The sgRNA guide sequence of the present invention is designed by referring to the pathogenic mutation site of the human G6PC gene and then positioning the site on the mouse G6pc gene according to the DNA sequence of the located site. The sgRNA guide sequence of the present invention can mediate the Cas9 protein to efficiently and specifically cut the target DNA, and then be used to edit the mouse G6pc gene, thereby affecting the function of the protein encoded by the mouse G6pc gene. The sgRNA guide sequence can be efficiently targeted by the CRISPR/Cas9 system with an efficiency of 100%.

本发明解决上述问题的技术方案如下:一种特异靶向小鼠G6pc基因的sgRNA导向序列,所述sgRNA对应的核苷酸序列为SEQ ID NO.2所示序列。The technical solution of the present invention to solve the above problems is as follows: a sgRNA guide sequence that specifically targets the mouse G6pc gene, and the nucleotide sequence corresponding to the sgRNA is the sequence shown in SEQ ID NO.2.

所述sgRNA的核苷酸序列:The nucleotide sequence of the sgRNA:

SEQ ID NO.2:5'-tgtccaggacccaccaatac-3'。SEQ ID NO. 2: 5'-tgtccaggacccaccaatac-3'.

本申请的发明人,为了得到上述特异靶向小鼠G6pc基因的sgRNA导向序列,进行了如下工作:The inventors of the present application, in order to obtain the above-mentioned sgRNA guide sequence specifically targeting the mouse G6pc gene, carried out the following work:

第一步:进行了人G6PC基因致病突变位点的筛查,确定人G6PC基因第83号位的Arg和第170号位的Arg为拟突变位点。The first step: The screening of the pathogenic mutation sites of the human G6PC gene was carried out, and the Arg at the 83rd position and the Arg at the 170th position of the human G6PC gene were determined as pseudo-mutation sites.

I型糖原贮积症是由G6PC基因突变引起的,利用OMIM在线数据库筛查到14个致病突变(如表1所示)。由于OMIM收录的突变位点有限,本发明也利用ExAC数据库筛查了人G6PC基因的功能失活突变,共筛查到11个突变位点(如表2和图1所示)。然后利用ClinVar数据库检索筛查到的25个突变位点,确定其突变致病性(如图2所示),最终确定人G6PC基因第83号位的Arg和第170号位的Arg为拟突变位点。Type I glycogen storage disease is caused by mutations in the G6PC gene, and 14 pathogenic mutations were screened using the OMIM online database (as shown in Table 1). Due to the limited mutation sites included in OMIM, the present invention also used the ExAC database to screen for inactivating mutations of the human G6PC gene, and a total of 11 mutation sites were screened (as shown in Table 2 and Figure 1). Then use the ClinVar database to search the screened 25 mutation sites to determine the pathogenicity of the mutation (as shown in Figure 2), and finally determine the Arg at position 83 and Arg at position 170 of the human G6PC gene as pseudo-mutations site.

第二步:小鼠G6PC基因致病突变位点的定位,定位小鼠第83号位的Arg和第170号位的Arg编码序列。The second step: locate the pathogenic mutation site of the mouse G6PC gene, locate the Arg coding sequence at the 83rd position and the Arg position at the 170th position in the mouse.

由于人和小鼠的物种差异,同一功能基因所编码的蛋白质序列及功能域可能不同,因此本申请的发明人利用Clustal Omega在线软件比对了人G6PC和小鼠G6pc蛋白序列,发现人G6PC基因第83号位的Arg和第170号位的Arg分别与小鼠G6pc基因第83号位的Arg和第170号位的Arg相对应(如图2所示)。然后从Ensembl数据库中导出小鼠G6pc基因序列,利用Vector NTI软件定位第83号位的Arg和第170号位的Arg编码序列,然后在编码序列附近设计基因打靶位点。Due to the species differences between humans and mice, the protein sequences and functional domains encoded by the same functional gene may be different. Therefore, the inventors of the present application used Clustal Omega online software to compare the protein sequences of human G6PC and mouse G6pc, and found that the human G6PC gene Arg at position 83 and Arg at position 170 correspond to Arg at position 83 and Arg at position 170 in mouse G6pc gene, respectively (as shown in Figure 2). Then, the mouse G6pc gene sequence was derived from the Ensembl database, and the coding sequences of Arg at position 83 and Arg at position 170 were located by Vector NTI software, and then gene targeting sites were designed near the coding sequences.

第三步:致病位点的基因编辑:符合5'-N(21)GG序列特征的位点为CRISPR/Cas9系统的编辑靶点,然后找到第83号位Arg和第170号位Arg编码序列附近的靶点。The third step: gene editing of the pathogenic site: the site that conforms to the characteristics of the 5'-N(21)GG sequence is the editing target of the CRISPR/Cas9 system, and then find the encoding of Arg at position 83 and Arg at position 170 Targets near the sequence.

小鼠G6pc的基因结构与人相同,其第83号位的Arg和第170号位分别由第二外显子和第四外显子编码。利用Vector NTI软件的“Find Motifs”功能搜索具有5'-N(21)GG序列特征的位点,凡是符合该序列特征的位点均被认为是CRISPR/Cas9系统的编辑靶点,然后找到第83号位Arg和第170号位Arg编码序列附近的靶点(如图3所示)。The gene structure of mouse G6pc is the same as that of human, and its Arg at position 83 and position 170 are encoded by the second and fourth exons, respectively. Use the "Find Motifs" function of Vector NTI software to search for sites with 5'-N(21)GG sequence characteristics, all sites that meet the sequence characteristics are considered to be the editing targets of the CRISPR/Cas9 system, and then find the first Targets near the coding sequences of Arg at position 83 and Arg at position 170 (as shown in Figure 3).

所述sgRNA在G6pc基因上的靶序列符合5'-N(21)GG的序列排列规则,所述sgRNA在G6pc基因上的靶序列位于基因的外显子,所述sgRNA在G6pc基因上的靶序列位于不同的各种剪切形式的共有外显子上,所述sgRNA在G6pc基因上的靶序列是唯一的。The target sequence of the sgRNA on the G6pc gene conforms to the sequence arrangement rule of 5'-N(21)GG, the target sequence of the sgRNA on the G6pc gene is located in the exon of the gene, and the target sequence of the sgRNA on the G6pc gene The sequences are located on a consensus exon of various spliced forms, and the target sequence of the sgRNA on the G6pc gene is unique.

本发明的目的之二,是提供一种利用上述特异靶向小鼠G6pc基因的sgRNA导向序列编辑小鼠G6pc基因的方法。本发明利用上述特异靶向小鼠G6pc基因的sgRNA导向序列,构建了可模拟人类G6PC基因的致病突变的CRISPR/Cas9系统,实现了小鼠N2a细胞的高效转染,确定了合适的阳性细胞药物筛选浓度,并实现了微量细胞的基因型分析,用于非医疗诊断或治疗目的,对研究G6PC功能、Ⅰ型糖原贮积病致病机理以及相关治疗方法等具有极其重要的作用。The second objective of the present invention is to provide a method for editing the mouse G6pc gene using the above-mentioned sgRNA guide sequence specifically targeting the mouse G6pc gene. The present invention utilizes the above-mentioned sgRNA guide sequence specifically targeting the mouse G6pc gene to construct a CRISPR/Cas9 system that can simulate the pathogenic mutation of the human G6PC gene, realizes the efficient transfection of mouse N2a cells, and determines suitable positive cells It can screen the concentration of drugs, and realize the genotype analysis of trace cells, which is used for non-medical diagnosis or treatment purposes.

本发明解决上述问题的技术方案如下:一种利用上述特异靶向小鼠G6pc基因的sgRNA导向序列编辑小鼠G6pc基因的方法,包括如下步骤:The technical solution of the present invention to solve the above problems is as follows: a method for editing the mouse G6pc gene using the above-mentioned sgRNA guide sequence specifically targeting the mouse G6pc gene, comprising the following steps:

步骤1:在上述sgRNA导向序列的5'端加上accg合成得到正向寡核苷酸序列;Step 1: Add accg to the 5' end of the sgRNA guide sequence to synthesize the forward oligonucleotide sequence;

同时根据上述sgRNA导向序列获得其对应的DNA互补链,并且在DNA互补链的5'端加上aaac合成得到反向寡核苷酸序列;At the same time, the corresponding DNA complementary strand is obtained according to the above-mentioned sgRNA guide sequence, and aaac is added to the 5' end of the DNA complementary strand to synthesize the reverse oligonucleotide sequence;

将正向寡核苷酸序列和反向寡核苷酸序列退火,形成具有粘性末端的双链DNA片段;Annealing the forward oligonucleotide sequence and the reverse oligonucleotide sequence to form double-stranded DNA fragments with cohesive ends;

步骤2:利用Bsa I限制性内切酶酶切SEQ ID NO.5所示的目标载体pGL3-U6-sgRNA质粒,得到酶切产物pGL3-U6-sgRNA-Bsa I;Step 2: Use Bsa I restriction endonuclease to digest the target vector pGL3-U6-sgRNA plasmid shown in SEQ ID NO.5 to obtain the enzyme-digested product pGL3-U6-sgRNA-Bsa I;

步骤3:将步骤1得到的具有粘性末端的双链DNA片段和步骤2得到的酶切产物pGL3-U6-sgRNA-Bsa I连接,将连接产物转化感受态大肠杆菌并涂布于含氨苄抗性的LB培养基上,37℃过夜培养20h后,挑取单克隆并用SEQ ID NO.6所示的通用引物U6通过测序鉴定出阳性克隆,对阳性克隆摇菌、提取质粒,得到pGL3-U6-G6pc-sgRNA质粒;Step 3: Connect the double-stranded DNA fragment with cohesive ends obtained in step 1 and the digestion product pGL3-U6-sgRNA-Bsa I obtained in step 2, transform the ligation product into competent E. coli and coat it on ampicillin-resistant After culturing overnight at 37°C for 20 hours, single clones were picked and the positive clones were identified by sequencing with the universal primer U6 shown in SEQ ID NO. 6. The positive clones were shaken and plasmids were extracted to obtain pGL3-U6- G6pc-sgRNA plasmid;

步骤4:将步骤3得到的pGL3-U6-G6pc-sgRNA质粒和SEQ ID NO.7所示的pST1374-NLS-flag-linker-Cas9表达质粒,共转染小鼠N2a细胞,经药物筛选后,得到阳性的sgRNA-Cas9共转染细胞;Step 4: The pGL3-U6-G6pc-sgRNA plasmid obtained in step 3 and the pST1374-NLS-flag-linker-Cas9 expression plasmid shown in SEQ ID NO.7 were co-transfected into mouse N2a cells. After drug screening, Obtain positive sgRNA-Cas9 co-transfected cells;

步骤5:将步骤4得到的阳性的sgRNA-Cas9共转染细胞,进行细胞裂解,以得到细胞裂解液为模板进行打靶位点DNA的PCR扩增反应,取打靶位点DNA的PCR扩增产物进行Sanger测序,如果打靶位点出现套峰,则初步确认发生了基因编辑;Step 5: Co-transfect the cells with the positive sgRNA-Cas9 obtained in step 4, carry out cell lysis, and use the cell lysate as a template to carry out PCR amplification reaction of the DNA of the target site, and take the PCR amplification product of the DNA of the target site Sanger sequencing is performed, and if there is a set of peaks at the target site, it is preliminarily confirmed that gene editing has occurred;

步骤6:TA克隆测序分析步骤5初步确认发生了基因编辑的打靶位点的基因型,并获得基因编辑后的小鼠细胞。Step 6: TA clone sequencing analysis Step 5 preliminarily confirms the genotype of the gene-edited target site, and obtains the gene-edited mouse cells.

在上述技术方案的基础上,本发明还可以做如下改进。On the basis of the above technical solutions, the present invention can also be improved as follows.

进一步,步骤1中,所述退火的反应体系具体为:10μM正向寡核苷酸,5μL;10μM反向寡核苷酸,5μL;10×T7 Endonuclease I buffer,2μL;ddH2O,8μL;反应程序具体为:95℃,5min;95℃到85℃,-1℃/循环,共10个循环;85℃到25℃,-0.1℃/循环,共600个循环,退火产物-20℃保存。Further, in step 1, the annealing reaction system is as follows: 10 μM forward oligonucleotide, 5 μL; 10 μM reverse oligonucleotide, 5 μL; 10×T7 Endonuclease I buffer, 2 μL; ddH 2 O, 8 μL; The specific reaction program is: 95°C, 5 min; 95°C to 85°C, -1°C/cycle, a total of 10 cycles; 85°C to 25°C, -0.1°C/cycle, a total of 600 cycles, and the annealed product is stored at -20°C .

采用上述进一步的有益效果是:采用上述反应体系和反应程序,可以实现正向寡核苷酸序列和反向寡核苷酸序列更加精准的配对互补,从而高效形成带有粘性末端的双链DNA片段。其中,-1℃/循环是指每降低1℃,循环一次;-0.1℃/循环,是指每降低0.1℃,循环一次。The further beneficial effects of adopting the above are: by adopting the above reaction system and reaction procedure, more accurate pairing and complementation of the forward oligonucleotide sequence and the reverse oligonucleotide sequence can be realized, thereby efficiently forming double-stranded DNA with sticky ends Fragment. Among them, -1°C/cycle refers to one cycle for every 1°C decrease; -0.1°C/cycle refers to one cycle for every 0.1°C decrease.

进一步,步骤2中,所述酶切的反应体系具体为:pGL3-U6-sgRNA质粒,2μg;10×酶切buffer,2μL;Bsa I限制性内切酶,2μL;补充ddH2O至总体积20μL,将酶切反应体系置于37℃反应3h。Further, in step 2, the reaction system of the restriction enzyme digestion is as follows: pGL3-U6-sgRNA plasmid, 2 μg; 10× digestion buffer, 2 μL; Bsa I restriction enzyme, 2 μL; add ddH 2 O to the total volume 20 μL, and the digestion reaction system was placed at 37 °C for 3 h.

采用上述进一步的有益效果是:采用上述反应体系,可以将pGL3-U6-sgRNA质粒充分酶切。The above-mentioned further beneficial effects are: using the above-mentioned reaction system, the pGL3-U6-sgRNA plasmid can be fully digested.

进一步,步骤3中,所述转化感受态大肠杆菌的具体方法为:取5μL连接产物快速加入到30μL感受态大肠杆菌中,充分混匀,冰上静置25min,42℃水浴热激90s,冰上冷却2min,加入150μL的LB液体培养基,转速为220转/min,37℃活化30min,然后涂布于氨苄抗性的LB固体培养基表面。Further, in step 3, the specific method for transforming competent E. coli is as follows: take 5 μL of the ligation product and quickly add it to 30 μL of competent E. coli, mix well, stand on ice for 25 min, heat shock in a water bath at 42°C for 90 s, and cool on ice for 90 seconds. Cool for 2 min, add 150 μL of LB liquid medium, rotate at 220 rpm, activate at 37° C. for 30 min, and then coat on the surface of ampicillin-resistant LB solid medium.

采用上述进一步的有益效果是:使得连接产物可以高效转化到感受态大肠杆菌中,使得重组子充分活化,提高阳性重组子的比例。The above-mentioned further beneficial effects are: the ligation product can be efficiently transformed into competent Escherichia coli, so that the recombinants are fully activated and the proportion of positive recombinants is increased.

进一步,步骤3中,所述具有氨苄抗性的LB培养基中,氨苄青霉素的浓度为50μg/mL。Further, in step 3, in the LB medium with ampicillin resistance, the concentration of ampicillin is 50 μg/mL.

采用上述进一步的有益效果是:采用具有氨苄抗性的LB培养基,可以有效杀伤阴性大肠杆菌,提高阳性菌落数量。The above-mentioned further beneficial effects are: the use of the LB medium with ampicillin resistance can effectively kill and injure negative Escherichia coli and increase the number of positive colonies.

进一步,步骤3中,所述摇菌的温度为37℃,转速为220转/min,过夜培养。Further, in step 3, the temperature of the shaking bacteria is 37° C., the rotation speed is 220 rpm, and the culture is performed overnight.

进一步,步骤3中,所述提取质粒采用去内毒素质粒中提试剂盒提取。Further, in step 3, the extraction plasmid is extracted using an endotoxin-removing plasmid mid-extraction kit.

采用上述进一步的有益效果是:采用去内毒素质粒中提试剂盒,可以获得高质量、高浓度、无内毒素的质粒,提高后续的细胞转染效率。The above-mentioned further beneficial effects are: by using the endotoxin-removing plasmid medium extraction kit, high-quality, high-concentration, endotoxin-free plasmids can be obtained, and subsequent cell transfection efficiency is improved.

上述去内毒素质粒中提试剂盒可以市售购买,如可以购自北京康为世纪生物科技有限公司,货号为CW2105S。The above endotoxin-removing plasmid middle extraction kit can be purchased commercially, for example, it can be purchased from Beijing Kangwei Century Biotechnology Co., Ltd., the product number is CW2105S.

进一步,步骤4中,所述药物为浓度为50μg/ml的嘌呤霉素和浓度为100μg/ml的杀稻瘟菌素。Further, in step 4, the drugs are puromycin with a concentration of 50 μg/ml and blasticidin with a concentration of 100 μg/ml.

采用上述进一步的有益效果是:利用嘌呤霉素和杀稻瘟菌素,可以高效筛选出sgRNA-Cas9的阳性转染细胞。The above-mentioned further beneficial effects are: using puromycin and blasticidin, the positive transfected cells of sgRNA-Cas9 can be efficiently screened.

进一步,步骤4中,所述小鼠N2a细胞在转染前,先接种培养于含10%v/v胎牛血清的DMEM完全培养基中,于37℃,5%CO2培养箱中培养,每2d-3d更换新鲜培养基,待细胞汇合度达到80%-90%后,以0.25%胰蛋白酶消化并传代,然后分至6孔板中,18h-20h后,待细胞汇合度达到60%-70%时进行转染。Further, in step 4, the mouse N2a cells were inoculated and cultured in DMEM complete medium containing 10% v/v fetal bovine serum before transfection, and cultured in a 37°C, 5% CO 2 incubator, Fresh medium was replaced every 2d-3d. When the cell confluence reached 80%-90%, it was digested with 0.25% trypsin and passaged, and then divided into 6-well plates. After 18h-20h, the cell confluence reached 60%. -70% for transfection.

采用上述进一步的有益效果是:小鼠N2a细胞,即小鼠神经瘤母细胞。采用小鼠N2a细胞,可以验证sgRNA导向序列具有高效的基因编辑效率。小鼠N2a细胞具有较高的外源DNA转染效率,且对嘌呤霉素和杀稻瘟菌素具有较高的敏感性,便于药物筛选阳性转染细胞。The above-mentioned further beneficial effects are: mouse N2a cells, namely mouse neuroma blast cells. Using mouse N2a cells, it can be verified that the sgRNA guide sequence has high gene editing efficiency. Mouse N2a cells have high transfection efficiency of exogenous DNA and high sensitivity to puromycin and blasticidin, which is convenient for drug screening of positive transfected cells.

转染小鼠N2a细胞,采用LipofectamineTM 3000Transfection Reagent(InvitrogenTM)试剂盒。上述试剂盒可以市售购买,如可以购自Thermo Fisher Scientific公司,货号为L3000015。转染时,每个孔(直径34.8mm)转染sgRNA表达质粒2.5μg和Cas9质粒2.5μg。Mouse N2a cells were transfected using Lipofectamine 3000 Transfection Reagent (Invitrogen ) kit. The above-mentioned kits can be purchased commercially, such as from Thermo Fisher Scientific, the product number is L3000015. During transfection, each well (34.8 mm in diameter) was transfected with 2.5 μg of sgRNA expression plasmid and 2.5 μg of Cas9 plasmid.

上述含胎牛血清和DMEM培养基,可以从市面购买,如购自Thermo FisherScientific公司,货号为16140071或11965118,都可以达到相同的效果。The above-mentioned culture medium containing fetal bovine serum and DMEM can be purchased from the market, such as from Thermo Fisher Scientific Company, the product number is 16140071 or 11965118, which can achieve the same effect.

进一步,步骤5中,所述打靶位点DNA的PCR扩增反应的体系为:细胞裂解液2μL,上游引物1μL,下游引物1μL,dNTP Mixture 2μL,TaKaRa Ex Taq 1μL,10×Ex Taq Buffer2.5μL,灭菌水补充至25μL;所述打靶位点DNA的PCR扩增反应的程序为:95℃,5min;95℃,20s,72℃,20s,-1℃/循环,72℃,25s,共10个循环;95℃,20s,62℃,25s,72℃,25s,共25个循环;72℃,5min,16℃,无穷。Further, in step 5, the PCR amplification reaction system of the target site DNA is: 2 μL of cell lysate, 1 μL of upstream primer, 1 μL of downstream primer, 2 μL of dNTP Mixture, 1 μL of TaKaRa Ex Taq, and 2.5 μL of 10×Ex Taq Buffer , sterilized water was added to 25μL; the PCR amplification reaction program of the target site DNA was: 95°C, 5min; 95°C, 20s, 72°C, 20s, -1°C/cycle, 72°C, 25s, total 10 cycles; 95°C, 20s, 62°C, 25s, 72°C, 25s, a total of 25 cycles; 72°C, 5min, 16°C, infinity.

其中,上述-1℃/循环是指每降低1℃,循环一次。The above -1°C/cycle refers to one cycle for every 1°C lowering.

更进一步,所述上游引物的序列如SEQ ID NO.8所示。Further, the sequence of the upstream primer is shown in SEQ ID NO.8.

SEQ ID NO.8:5'-aagaccaccactgcatcgaact-3'。SEQ ID NO. 8: 5'-aagaccaccactgcatcgaact-3'.

更进一步,所述下游引物的序列如SEQ ID NO.9所示。Further, the sequence of the downstream primer is shown in SEQ ID NO.9.

SEQ ID NO.9:5'-caggctgctaggaaggacactc-3'。SEQ ID NO. 9: 5'-caggctgctaggaaggacactc-3'.

上述上游引物和下游引物由上海百力格生物技术有限公司合成。上述dNTPMixture、TaKaRa Ex Taq和10×Ex Taq Buffer均购自宝日医生物技术(北京)有限公司,货号为RR001A。The above upstream primers and downstream primers were synthesized by Shanghai Bailiger Biotechnology Co., Ltd. The above-mentioned dNTP Mixture, TaKaRa Ex Taq and 10×Ex Taq Buffer were purchased from Baori Doctor Biotechnology (Beijing) Co., Ltd., the product number is RR001A.

进一步,步骤6中,所述TA克隆测序具体为:将步骤5得到的打靶位点的PCR扩增产物进行胶回收纯化,将纯化后的DNA进行连接,然后16℃金属浴1h,得到连接产物;将连接产物转化感受态大肠杆菌并涂含氨苄抗性的LB培养基上,37℃过夜培养20h后,进行菌落PCR反应验证,筛选出阳性克隆,并将阳性克隆进行Sanger测序。Further, in step 6, the TA cloning and sequencing is specifically: performing gel recovery and purification on the PCR amplification product of the target site obtained in step 5, ligating the purified DNA, and then taking a metal bath at 16°C for 1 h to obtain the ligation product The ligation product was transformed into competent Escherichia coli and spread on LB medium containing ampicillin resistance. After culturing overnight at 37°C for 20 hours, the colony PCR reaction was performed to verify the positive clones, and the positive clones were subjected to Sanger sequencing.

采用上述更进一步的有益效果是:采用TA克隆测序,可以将单条PCR产物连接到载体上,通过测序分析可以得到打靶位点的基因型。The further beneficial effects of using the above are: using TA cloning and sequencing, a single PCR product can be connected to a carrier, and the genotype of the target site can be obtained through sequencing analysis.

上述Solution I和PMD19载体可以市售购买,如可以购自宝日医生物技术(北京)有限公司,货号为6013。Above-mentioned Solution I and PMD19 carrier can be purchased commercially, such as can be purchased from Bao Ri Doctor Biotechnology (Beijing) Co., Ltd., the article number is 6013.

更进一步,所述连接的反应体系为:PCR纯化产物40ng、Solution I 2.5μL和PMD19载体0.5μL,加水补充至5μL;所述转化感受态大肠杆菌的具体方法为:取5μL连接产物快速加入到30μL感受态大肠杆菌中,充分混匀,冰上静置25min,42℃水浴热激90s,冰上冷却2min,加入150μL的LB液体培养基,转速为220转/min,37℃活化30min,然后涂布于氨苄抗性的LB固体培养基表面。Further, the reaction system for the connection is: PCR purification product 40ng, Solution I 2.5μL and PMD19 carrier 0.5μL, add water to make up to 5μL; the specific method for the transformation of competent Escherichia coli is: take 5μL of the ligation product and quickly add it to 30 μL of competent Escherichia coli was mixed well, left standing on ice for 25 min, heat-shocked in a water bath at 42 °C for 90 s, cooled on ice for 2 min, added 150 μL of LB liquid medium at a speed of 220 rpm, activated at 37 °C for 30 min, and then Coated on the surface of ampicillin-resistant LB solid medium.

更进一步,所述具有氨苄抗性的LB培养基中,氨苄青霉素的浓度为50μg/mL。Furthermore, in the LB medium with ampicillin resistance, the concentration of ampicillin is 50 μg/mL.

采用上述更进一步的有益效果是:采用具有氨苄抗性的LB培养基,可以有效杀伤阴性大肠杆菌,提高阳性菌落数量。The further beneficial effect of adopting the above is: adopting the LB medium with ampicillin resistance can effectively kill and injure negative Escherichia coli and increase the number of positive colonies.

更进一步,所述菌落PCR反应的体系为:菌落水溶液1μL,Premix Taq酶5μL,上游引物0.5μL,下游引物0.5μL,灭菌水补充至10μL;所述菌落PCR反应的程序为:95℃,5min;95℃,20s,60℃,20s,72℃,25s,26个循环;72℃,5min。Furthermore, the system of the colony PCR reaction is: 1 μL of the colony aqueous solution, 5 μL of Premix Taq enzyme, 0.5 μL of the upstream primer, 0.5 μL of the downstream primer, and supplemented with 10 μL of sterilized water; the procedure of the colony PCR reaction is: 95°C, 5min; 95℃, 20s, 60℃, 20s, 72℃, 25s, 26 cycles; 72℃, 5min.

更进一步,所述上游引物的序列如SEQ ID NO.10所示。Further, the sequence of the upstream primer is shown in SEQ ID NO.10.

SEQ ID NO.10:5'-gtaaaacgacggccagt-3'。SEQ ID NO. 10: 5'-gtaaaacgacggccagt-3'.

更进一步,所述下游引物的序列如SEQ ID NO.11所示。Further, the sequence of the downstream primer is shown in SEQ ID NO.11.

SEQ ID NO.11:5'-caggaaacagctatgac-3'。SEQ ID NO. 11: 5'-caggaaacagctatgac-3'.

上述上游引物和下游引物由上海百力格生物技术有限公司合成。上述Premix Taq酶购自宝日医生物技术(北京)有限公司,货号为R004Q。The above upstream primers and downstream primers were synthesized by Shanghai Bailiger Biotechnology Co., Ltd. The above-mentioned Premix Taq enzyme was purchased from Bao Ri Doctor Biotechnology (Beijing) Co., Ltd., the item number is R004Q.

更进一步,所述菌落水溶液是取直径为1mm的单克隆菌落溶解于10μL灭菌水中制备而成。Furthermore, the colony aqueous solution is prepared by dissolving monoclonal colonies with a diameter of 1 mm in 10 μL of sterilized water.

本发明的有益效果:Beneficial effects of the present invention:

(1)本发明的sgRNA导向序列可以介导Cas9蛋白,高效、特异性地切割靶点DNA,进而用于编辑小鼠G6pc基因,影响小鼠G6pc基因编码蛋白的功能。该sgRNA导向序列可以通过CRISPR/Cas9系统实现高效打靶,效率为100%。(1) The sgRNA guide sequence of the present invention can mediate the Cas9 protein to efficiently and specifically cut the target DNA, and then be used to edit the mouse G6pc gene, thereby affecting the function of the protein encoded by the mouse G6pc gene. The sgRNA guide sequence can be efficiently targeted by the CRISPR/Cas9 system with an efficiency of 100%.

(2)本发明利用上述特异靶向小鼠G6pc基因的sgRNA导向序列,构建了可模拟人类G6PC基因的致病突变的CRISPR/Cas9系统,实现了小鼠N2a细胞的高效转染,确定了合适的阳性细胞药物筛选浓度,并实现了微量细胞的基因型分析,用于非医疗诊断或治疗目的,对研究G6PC功能、Ⅰ型糖原贮积病致病机理以及相关治疗方法等具有极其重要的作用。(2) The present invention utilizes the above-mentioned sgRNA guide sequence specifically targeting the mouse G6pc gene to construct a CRISPR/Cas9 system that can simulate the pathogenic mutation of the human G6PC gene, realizes the efficient transfection of mouse N2a cells, and determines the appropriate The concentration of positive cells for drug screening, and the genotype analysis of trace cells is realized, which is used for non-medical diagnosis or treatment purposes. effect.

附图说明Description of drawings

图1为ExAC数据库中人G6PC基因外显子结构及功能失活突变示意图。图中,圆点代表功能失活突变,箭头代表转录方向。Figure 1 is a schematic diagram of the exon structure and function-inactivating mutations of the human G6PC gene in the ExAC database. In the figure, the dots represent inactivating mutations, and the arrows represent the direction of transcription.

图2为人和小鼠G6PC蛋白序列比对。从上至下的第一个方框,为拟突变的人和小鼠第83位Arg;从上至下的第二个方框,为人和小鼠第170位Arg。Figure 2 is an alignment of human and mouse G6PC protein sequences. The first box from top to bottom is the 83rd Arg of human and mouse to be mutated; the second box from top to bottom is the 170th Arg of human and mouse.

图3为小鼠G6pc致病位点的基因编辑设计及靶点序列。Figure 3 shows the gene editing design and target sequence of the mouse G6pc pathogenic locus.

图4为阳性克隆的PCR验证图。图中,M代表Marker,1和2代表pGL3-U6-G6pc-sgRNA1;3和4代表pGL3-U6-G6pc-sgRNA2;5和6代表pGL3-U6-G6pc-sgRNA3;7和8代表pGL3-U6-G6pc-sgRNA4。Figure 4 is a PCR verification diagram of positive clones. In the figure, M represents Marker, 1 and 2 represent pGL3-U6-G6pc-sgRNA1; 3 and 4 represent pGL3-U6-G6pc-sgRNA2; 5 and 6 represent pGL3-U6-G6pc-sgRNA3; 7 and 8 represent pGL3-U6 -G6pc-sgRNA4.

图5为sgRNA1靶点序列。图中,黑色阴影为sgRNA1野生型靶点序列。Figure 5 is the sgRNA1 target sequence. In the figure, the black shading is the sgRNA1 wild-type target sequence.

图6为sgRNA2靶点基因编辑序列。Figure 6 shows the sgRNA2 target gene editing sequence.

图7为sgRNA3靶点序列。图中,黑色阴影为sgRNA3野生型靶点序列。Figure 7 is the sgRNA3 target sequence. In the figure, the black shading is the sgRNA3 wild-type target sequence.

图8为sgRNA4靶点序列。图中,黑色阴影为sgRNA4野生型靶点序列。Figure 8 is the sgRNA4 target sequence. In the figure, the black shading is the sgRNA4 wild-type target sequence.

图9为sgRNA2靶点序列。图中,黑色阴影为sgRNA2野生型靶点序列。Figure 9 is the sgRNA2 target sequence. In the figure, the black shading is the sgRNA2 wild-type target sequence.

具体实施方式Detailed ways

以下结合具体附图对本发明的原理和特征进行描述,所举实例只用于解释本发明,并非用于限定本发明的范围。The principles and features of the present invention will be described below with reference to the specific drawings. The examples are only used to explain the present invention, but not to limit the scope of the present invention.

一、人G6PC基因致病突变位点的筛查,确定人G6PC基因第83号位的Arg和第170号位的Arg为拟突变位点1. Screening of pathogenic mutation sites of human G6PC gene to determine Arg at position 83 and Arg at position 170 of human G6PC gene as pseudo-mutation sites

I型糖原贮积症是由G6PC基因突变引起的,利用OMIM在线数据库筛查到14个致病突变(如表1所示)。由于OMIM收录的突变位点有限,本发明也利用ExAC数据库筛查了人G6PC基因的功能失活突变,共筛查到11个突变位点(如表2和图1所示)。然后利用ClinVar数据库检索筛查到的25个突变位点,确定其突变致病性(如图2所示),最终确定人G6PC基因第83号位的Arg和第170号位的Arg为拟突变位点。Type I glycogen storage disease is caused by mutations in the G6PC gene, and 14 pathogenic mutations were screened using the OMIM online database (as shown in Table 1). Due to the limited mutation sites included in OMIM, the present invention also used the ExAC database to screen for inactivating mutations of the human G6PC gene, and a total of 11 mutation sites were screened (as shown in Table 2 and Figure 1). Then use the ClinVar database to search the screened 25 mutation sites to determine the pathogenicity of the mutation (as shown in Figure 2), and finally determine the Arg at position 83 and Arg at position 170 of the human G6PC gene as pseudo-mutations site.

表1 OMIM数据库中人G6PC基因的致病突变类型Table 1 Types of pathogenic mutations in human G6PC gene in the OMIM database

Figure BDA0002260780620000111
Figure BDA0002260780620000111

表2 ExAC数据库中人G6PC的功能失活突变Table 2 Inactivating mutations of human G6PC in the ExAC database

Figure BDA0002260780620000121
Figure BDA0002260780620000121

检索ClinVar数据库,确定(G6PC):c.247C>T(p.Arg83Cys)为1A型糖原贮积症的致病突变,登记号:RCV000012778.10。The ClinVar database was searched, and (G6PC): c.247C>T (p.Arg83Cys) was identified as the pathogenic variant of glycogenosis type 1A, accession number: RCV000012778.10.

检索ClinVar数据库,确定(G6PC):c.508C>T(p.Arg170Ter)为1A型糖原贮积症的致病突变,登记号:RCV000624988.3。The ClinVar database was searched, and (G6PC): c.508C>T (p.Arg170Ter) was identified as the pathogenic mutation of glycogen storage disease type 1A, accession number: RCV000624988.3.

二、小鼠G6PC基因致病突变位点的定位,定位小鼠第83号位的Arg和第170号位的Arg编码序列。2. The location of the pathogenic mutation site of the mouse G6PC gene, the coding sequence of Arg at position 83 and Arg at position 170 in mouse.

由于人和小鼠的物种差异,同一功能基因所编码的蛋白质序列及功能域可能不同,因此本申请的发明人利用Clustal Omega在线软件比对了人G6PC和小鼠G6pc蛋白序列,发现人G6PC基因第83号位的Arg和第170号位的Arg分别与小鼠G6pc基因第83号位的Arg和第170号位的Arg相对应(如图2所示)。然后从Ensembl数据库中导出小鼠G6pc基因序列,利用Vector NTI软件定位第83号位的Arg和第170号位的Arg编码序列,然后在编码序列附近设计基因编辑位点。Due to the species differences between humans and mice, the protein sequences and functional domains encoded by the same functional gene may be different. Therefore, the inventors of the present application used Clustal Omega online software to compare the protein sequences of human G6PC and mouse G6pc, and found that the human G6PC gene Arg at position 83 and Arg at position 170 correspond to Arg at position 83 and Arg at position 170 in mouse G6pc gene, respectively (as shown in Figure 2). Then the mouse G6pc gene sequence was derived from the Ensembl database, and the coding sequences of Arg at position 83 and Arg at position 170 were located by Vector NTI software, and then gene editing sites were designed near the coding sequences.

三、致病位点的基因编辑:符合5'-N(21)GG序列特征的位点为CRISPR/Cas9系统的编辑靶点,然后找到第83号位Arg和第170号位Arg编码序列附近的靶点3. Gene editing of pathogenic loci: The locus that conforms to the characteristics of the 5'-N(21)GG sequence is the editing target of the CRISPR/Cas9 system, and then find the 83rd position Arg and the 170th position near the coding sequence of Arg target

小鼠G6pc的基因结构与人相同,其第83号位的Arg和第170号位分别由第二外显子和第四外显子编码。利用Vector NTI软件的“Find Motifs”功能搜索具有5'-N(21)GG序列特征的位点,凡是符合该序列特征的位点均被认为是CRISPR/Cas9系统的编辑靶点,然后找到第83号位Arg和第170号位Arg编码序列附近的靶点(如图3所示)。The gene structure of mouse G6pc is the same as that of human, and its Arg at position 83 and position 170 are encoded by the second and fourth exons, respectively. Use the "Find Motifs" function of Vector NTI software to search for sites with 5'-N(21)GG sequence characteristics, all sites that meet the sequence characteristics are considered to be the editing targets of the CRISPR/Cas9 system, and then find the first Targets near the coding sequences of Arg at position 83 and Arg at position 170 (as shown in Figure 3).

sgRNA在G6pc基因上的靶序列符合5'-N(21)GG的序列排列规则,sgRNA在G6pc基因上的靶序列位于基因的外显子,sgRNA在G6pc基因上的靶序列位于不同的各种剪切形式的共有外显子上,sgRNA在G6pc基因上的靶序列是唯一的。The target sequence of sgRNA on G6pc gene conforms to the sequence arrangement rule of 5'-N(21)GG, the target sequence of sgRNA on G6pc gene is located in the exon of the gene, and the target sequence of sgRNA on G6pc gene is located in different The target sequence of the sgRNA on the G6pc gene is unique on the consensus exon in the spliced form.

本发明共设计4个打靶位点的sgRNA导向序列,分别为SEQ ID NO.1、SEQ ID NO.2、SEQ ID NO.3和SEQ ID NO.4所示的序列。The present invention designs a total of 4 sgRNA guide sequences for targeting sites, which are respectively the sequences shown in SEQ ID NO.1, SEQ ID NO.2, SEQ ID NO.3 and SEQ ID NO.4.

SEQ ID NO.1:5'-tgtttggacaacgcccgtat-3'(以下简称“sgRNA1”)。SEQ ID NO. 1: 5'-tgtttggacaacgcccgtat-3' (hereinafter referred to as "sgRNA1").

SEQ ID NO.2:5'-tgtccaggacccaccaatac-3'(以下简称“sgRNA2”)。SEQ ID NO. 2: 5'-tgtccaggacccaccaatac-3' (hereinafter referred to as "sgRNA2").

SEQ ID NO.3:5'-agctgaacgtctgtctgtcc-3'(以下简称“sgRNA3”)。SEQ ID NO. 3: 5'-agctgaacgtctgtctgtcc-3' (hereinafter referred to as "sgRNA3").

SEQ ID NO.4:5'-gtgagcagcaaggtagatcc-3'(以下简称“sgRNA4”)。SEQ ID NO. 4: 5'-gtgagcagcaaggtagatcc-3' (hereinafter referred to as "sgRNA4").

四、利用上述sgRNA导向序列编辑小鼠G6pc基因4. Editing the mouse G6pc gene using the above sgRNA guide sequences

步骤1:sgRNA表达载体的构建Step 1: Construction of sgRNA expression vector

在上述4个sgRNA导向序列的5'端加上accg合成得到正向寡核苷酸序列(G6pc-M-sg1+、G6pc-M-sg2+、G6pc-M-sg3+、G6pc-M-sg4+);The forward oligonucleotide sequences (G6pc-M-sg1 + , G6pc-M-sg2 + , G6pc-M-sg3 + , G6pc-M-sg4 + , G6pc-M-sg4 + , G6pc-M-sg4 + , G6pc-M-sg4 + , G6pc-M-sg4 + , G6pc-M-sg4 + );

同时根据上述sgRNA导向序列获得其对应的DNA互补链,并且在DNA互补链的5'端加上aaac合成得到反向寡核苷酸序列(G6pc-M-sg1-、G6pc-M-sg2-、G6pc-M-sg3-、G6pc-M-sg4-);At the same time, the corresponding DNA complementary strand is obtained according to the above-mentioned sgRNA guide sequence, and the reverse oligonucleotide sequence (G6pc-M-sg1-, G6pc - M-sg2-, G6pc-M-sg2-, G6pc-M-sg2-, G6pc-M-sg2-, G6pc-M - sg2-, G6pc-M - sg3-, G6pc-M - sg4-);

将正向寡核苷酸序列和反向寡核苷酸序列退火,形成具有粘性末端的双链DNA片段。其中,退火的反应体系具体为:10μM正向寡核苷酸,5μL;10μM反向寡核苷酸,5μL;10×T7Endonuclease I buffer,2μL;ddH2O,8μL;反应程序具体为:95℃,5min;95℃到85℃,-1℃/循环(即每降低1℃,循环一次),共10个循环;85℃到12℃,-0.1℃/循环(即每降低0.1℃,循环一次),共600个循环,退火产物-20℃保存。The forward and reverse oligonucleotide sequences are annealed to form double-stranded DNA fragments with cohesive ends. The annealing reaction system is: 10 μM forward oligonucleotide, 5 μL; 10 μM reverse oligonucleotide, 5 μL; 10×T7Endonuclease I buffer, 2 μL; ddH 2 O, 8 μL; the reaction program is: 95°C , 5min; 95°C to 85°C, -1°C/cycle (that is, for every 1°C decrease, cycle once), a total of 10 cycles; 85°C to 12°C, -0.1°C/cycle (that is, for every 0.1°C decrease, cycle once) ) for a total of 600 cycles, and the annealed products were stored at -20°C.

化学合成的正向寡核苷酸和反向寡核苷酸,如表3所示。Chemically synthesized forward oligonucleotides and reverse oligonucleotides are shown in Table 3.

表3化学合成的正向寡核苷酸和反向寡核苷酸Table 3 Chemically synthesized forward oligonucleotides and reverse oligonucleotides

G6pc-M-sg1<sup>+</sup>G6pc-M-sg1<sup>+</sup> 5'-accgtgtttggacaacgcccgtat-3'(SEQ ID NO.14)5'-accgtgtttggacaacgcccgtat-3' (SEQ ID NO. 14) G6pc-M-sg1<sup>-</sup>G6pc-M-sg1<sup>-</sup> 5'-aaacatacgggcgttgtccaaaca-3'(SEQ ID NO.15)5'-aaacatacgggcgttgtccaaaca-3' (SEQ ID NO. 15) G6pc-M-sg2<sup>+</sup>G6pc-M-sg2<sup>+</sup> 5'-accgtgtccaggacccaccaatac-3'(SEQ ID NO.16)5'-accgtgtccaggacccaccaatac-3' (SEQ ID NO. 16) G6pc-M-sg2<sup>-</sup>G6pc-M-sg2<sup>-</sup> 5'-aaacgtattggtgggtcctggaca-3'(SEQ ID NO.17)5'-aaacgtattggtgggtcctggaca-3' (SEQ ID NO. 17) G6pc-M-sg3<sup>+</sup>G6pc-M-sg3<sup>+</sup> 5'-accgagctgaacgtctgtctgtcc-3'(SEQ ID NO.18)5'-accgagctgaacgtctgtctgtcc-3' (SEQ ID NO. 18) G6pc-M-sg3<sup>-</sup>G6pc-M-sg3<sup>-</sup> 5'-aaacggacagacagacgttcagct-3'(SEQ ID NO.19)5'-aaacggacagacagacgttcagct-3' (SEQ ID NO. 19) G6pc-M-sg4<sup>+</sup>G6pc-M-sg4<sup>+</sup> 5'-accggtgagcagcaaggtagatcc-3'(SEQ ID NO.20)5'-accggtgagcagcaaggtagatcc-3' (SEQ ID NO. 20) G6pc-M-sg4<sup>-</sup>G6pc-M-sg4<sup>-</sup> 5'-aaacggatctaccttgctgctcac-3'(SEQ ID NO.21)5'-aaacggatctaccttgctgctcac-3' (SEQ ID NO. 21)

步骤2:利用Bsa I限制性内切酶酶切SEQ ID NO.5所示的目标载体pGL3-U6-sgRNA质粒,得到酶切产物pGL3-U6-sgRNA-Bsa I。其中,酶切的反应体系具体为:pGL3-U6-sgRNA质粒,2μg;10×酶切buffer,2μL;Bsa I限制性内切酶,2μL;补充ddH2O至总体积20μL,将酶切反应体系置于37℃反应3h。Step 2: The target vector pGL3-U6-sgRNA plasmid shown in SEQ ID NO. 5 was digested with Bsa I restriction endonuclease to obtain the digested product pGL3-U6-sgRNA-Bsa I. Among them, the reaction system of restriction enzyme digestion is as follows: pGL3-U6-sgRNA plasmid, 2 μg; 10× digestion buffer, 2 μL; Bsa I restriction endonuclease, 2 μL; supplemented with ddH 2 O to a total volume of 20 μL, and the restriction enzyme digestion reaction was carried out. The system was placed at 37°C to react for 3h.

步骤3:将步骤1得到的具有粘性末端的双链DNA片段分别和步骤2得到的酶切产物pGL3-U6-sgRNA-Bsa I连接,取5μL连接产物快速加入到30μL感受态大肠杆菌中,充分混匀,冰上静置25min,42℃水浴热激90s,冰上冷却2min,加入150μL的LB液体培养基,转速为220转/min,37℃活化30min。然后,涂布于氨苄抗性的LB固体培养基(其中氨苄青霉素的浓度为50μg/mL)表面,37℃过夜培养20h后,挑取单克隆并用菌液PCR和琼脂糖凝胶电泳的出阳性克隆(如图4所示)。将阳性克隆在37℃,转速为220转/min,摇菌过夜培养。采用去内毒素质粒中提试剂盒提取质粒,分别得到pGL3-U6-G6pc-sgRNA1质粒、pGL3-U6-G6pc-sgRNA2质粒、pGL3-U6-G6pc-sgRNA3质粒和pGL3-U6-G6pc-sgRNA4质粒。上述质粒利用SEQ ID NO.6所示的通用引物U6进行测序确认目标DNA片段插入到载体的特定位点。上述去内毒素质粒中提试剂盒可以市售购买,如可以购自北京康为世纪生物科技有限公司,货号为CW2105S。Step 3: Connect the double-stranded DNA fragments with sticky ends obtained in step 1 to the digestion product pGL3-U6-sgRNA-Bsa I obtained in step 2, respectively, take 5 μL of the ligation product and quickly add it to 30 μL of competent E. coli. Mix well, let stand on ice for 25 min, heat shock in 42 °C water bath for 90 s, cool on ice for 2 min, add 150 μL of LB liquid medium, rotate at 220 rpm, and activate at 37 °C for 30 min. Then, it was coated on the surface of ampicillin-resistant LB solid medium (ampicillin concentration was 50 μg/mL), and after culturing overnight at 37°C for 20 h, single clones were picked and positive by bacterial liquid PCR and agarose gel electrophoresis clone (as shown in Figure 4). The positive clones were incubated overnight at 37°C with a rotating speed of 220 rpm. Plasmids were extracted with endotoxin-removing plasmid mid-extraction kit to obtain pGL3-U6-G6pc-sgRNA1 plasmid, pGL3-U6-G6pc-sgRNA2 plasmid, pGL3-U6-G6pc-sgRNA3 plasmid and pGL3-U6-G6pc-sgRNA4 plasmid, respectively. The above plasmid is sequenced using the universal primer U6 shown in SEQ ID NO. 6 to confirm that the target DNA fragment is inserted into the specific site of the vector. The above endotoxin-removing plasmid middle extraction kit can be purchased commercially, for example, it can be purchased from Beijing Kangwei Century Biotechnology Co., Ltd., the product number is CW2105S.

SEQ ID NO.6:5'-atggactatcatatgcttaccgta-3'。SEQ ID NO. 6: 5'-atggactatcatatgcttaccgta-3'.

步骤4:将小鼠N2a细胞先接种培养于含10%v/v胎牛血清的DMEM完全培养基中,于37℃,5%CO2培养箱中培养,每2d-3d更换新鲜培养基,待细胞汇合度达到80%-90%后,以0.25%胰蛋白酶消化并传代。然后,分至6孔板中,18h-20h后,待细胞汇合度达到60%-70%时进行转染。Step 4: The mouse N2a cells were first inoculated and cultured in DMEM complete medium containing 10% v/v fetal bovine serum, and cultured in a 37°C, 5% CO 2 incubator, with fresh medium replaced every 2d-3d, After the cells reached 80%-90% confluence, they were digested with 0.25% trypsin and passaged. Then, it was divided into 6-well plates, and after 18h-20h, the cells were transfected when the confluence reached 60%-70%.

采用LipofectamineTM 3000Transfection Reagent(InvitrogenTM)试剂盒分别装载步骤3得到的pGL3-U6-G6pc-sgRNA1质粒、pGL3-U6-G6pc-sgRNA2质粒、pGL3-U6-G6pc-sgRNA3质粒、pGL3-U6-G6pc-sgRNA4质粒,以及SEQ ID NO.7所示的pST1374-NLS-flag-linker-Cas9表达质粒,共转染小鼠N2a细胞。上述LipofectamineTM 3000TransfectionReagent(InvitrogenTM)试剂盒可以市售购买,如可以购自Thermo Fisher Scientific公司,货号为L3000015。转染时,每个孔(直径34.8mm)转染sgRNA表达质粒2.5μg和pST1374-NLS-flag-linker-Cas9表达质粒2.5μg。Lipofectamine TM 3000 Transfection Reagent (Invitrogen TM ) kit was used to load pGL3-U6-G6pc-sgRNA1 plasmid, pGL3-U6-G6pc-sgRNA2 plasmid, pGL3-U6-G6pc-sgRNA3 plasmid, pGL3-U6-G6pc- The sgRNA4 plasmid, and the pST1374-NLS-flag-linker-Cas9 expression plasmid shown in SEQ ID NO. 7, were co-transfected into mouse N2a cells. The above-mentioned Lipofectamine TM 3000 Transfection Reagent (Invitrogen TM ) kit can be purchased commercially, for example, can be purchased from Thermo Fisher Scientific, the product number is L3000015. During transfection, each well (34.8 mm in diameter) was transfected with 2.5 μg of sgRNA expression plasmid and 2.5 μg of pST1374-NLS-flag-linker-Cas9 expression plasmid.

采用浓度为50μg/ml的嘌呤霉素和浓度为100μg/ml的杀稻瘟菌素进行药物筛选,分别得到阳性的sgRNA1-Cas9共转染细胞、sgRNA2-Cas9共转染细胞、sgRNA3-Cas9共转染细胞和sgRNA4-Cas9共转染细胞。将上述4组共转染细胞用磷酸盐缓冲液洗涤3次,然后用0.25%的胰蛋白酶消化,离心收集。Puromycin at a concentration of 50 μg/ml and blasticidin at a concentration of 100 μg/ml were used for drug screening, and positive sgRNA1-Cas9 co-transfected cells, sgRNA2-Cas9 co-transfected cells, and sgRNA3-Cas9 co-transfected cells were obtained, respectively. Transfected cells and sgRNA4-Cas9 co-transfected cells. The above four groups of co-transfected cells were washed three times with phosphate buffer, then digested with 0.25% trypsin, and collected by centrifugation.

步骤5:采用TransDirect Animal Tissue PCR kit试剂盒将步骤4得到的阳性的sgRNA1-Cas9共转染细胞、阳性的sgRNA2-Cas9共转染细胞、阳性的sgRNA3-Cas9共转染细胞和阳性的sgRNA4-Cas9共转染细胞分别于转速为8000转/min,5min离心去上清,加入8μL的AD1悬浮细胞沉淀,然后取8μL液体至PCR管,加入2μL的AD2,55℃孵育10min,95℃,3min;加入8μL的AD3混匀,分别得到4组细胞的细胞裂解液,作为后续打靶位点DNA的PCR扩增的模板,-20℃保存。上述TransDirect Animal Tissue PCR kit试剂盒可以市售购买,如可以购自北京全式金生物公司,货号为AD201-01。Step 5: Co-transfect cells with positive sgRNA1-Cas9, positive sgRNA2-Cas9, positive sgRNA3-Cas9 and positive sgRNA4- Cas9 co-transfected cells were centrifuged at 8000 rpm for 5 min to remove the supernatant, and 8 μL of AD1 was added to suspend the cell pellet, then 8 μL of the liquid was transferred to a PCR tube, 2 μL of AD2 was added, and incubated at 55°C for 10 min, 95°C for 3 min ; Add 8 μL of AD3 and mix well to obtain cell lysates of 4 groups of cells, which are used as templates for subsequent PCR amplification of target site DNA, and stored at -20°C. The above-mentioned TransDirect Animal Tissue PCR kit can be purchased commercially, for example, it can be purchased from Beijing Quanshijin Biological Co., Ltd., the product number is AD201-01.

分别以上述4组细胞的细胞裂解液为模板,进行打靶位点DNA的PCR扩增反应。其中,sgRNA1和sgRNA2的打靶位点DNA的PCR扩增反应的体系为:细胞裂解液2μL,上游引物1μL,下游引物1μL,dNTP Mixture 2μL,TaKaRa Ex Taq 1μL,10×Ex Taq Buffer 2.5μL,灭菌水补充至25μL。上游引物的序列如SEQ ID NO.8所示,SEQ ID NO.8:5'-aagaccaccactgcatcgaact-3'。下游引物的序列如SEQ ID NO.9所示,SEQ ID NO.9:The cell lysates of the above four groups of cells were used as templates to carry out the PCR amplification reaction of the target site DNA. Among them, the PCR amplification reaction system of the target site DNA of sgRNA1 and sgRNA2 is: cell lysate 2 μL, upstream primer 1 μL, downstream primer 1 μL, dNTP Mixture 2 μL, TaKaRa Ex Taq 1 μL, 10×Ex Taq Buffer 2.5 μL, sterilization Bacteria water was added to 25 μL. The sequence of the upstream primer is shown in SEQ ID NO. 8, SEQ ID NO. 8: 5'-aagaccaccactgcatcgaact-3'. The sequence of the downstream primer is shown in SEQ ID NO.9, SEQ ID NO.9:

5'-caggctgctaggaaggacactc-3'。5'-caggctgctaggaaggacactc-3'.

sgRNA3和sgRNA4的打靶位点DNA的PCR扩增反应的体系为:细胞裂解液2μL,上游引物1μL,下游引物1μL,dNTP Mixture 2μL,TaKaRa Ex Taq 1μL,10×Ex Taq Buffer 2.5μL,灭菌水补充至25μL。上游引物的序列如SEQ ID NO.12所示,SEQ ID NO.12:5'-gagaccctaactggagaccaag-3'。下游引物的序列如SEQ ID NO.13所示,SEQ ID NO.13:The PCR amplification reaction system of the target site DNA of sgRNA3 and sgRNA4 is: 2 μL of cell lysate, 1 μL of upstream primer, 1 μL of downstream primer, 2 μL of dNTP Mixture, 1 μL of TaKaRa Ex Taq, 2.5 μL of 10×Ex Taq Buffer, sterilized water Make up to 25 μL. The sequence of the upstream primer is shown in SEQ ID NO. 12, SEQ ID NO. 12: 5'-gagaccctaactggagaccaag-3'. The sequence of the downstream primer is shown in SEQ ID NO.13, SEQ ID NO.13:

5'-ctggaatacaggcaggtaaatc-3'。5'-ctggaatacaggcaggtaaatc-3'.

上述两组上游引物和下游引物均由上海百力格生物技术有限公司合成。上述dNTPMixture、TaKaRa Ex Taq和10×Ex Taq Buffer均购自宝日医生物技术(北京)有限公司,货号为RR001A。The above two sets of upstream primers and downstream primers were synthesized by Shanghai Bailiger Biotechnology Co., Ltd. The above-mentioned dNTP Mixture, TaKaRa Ex Taq and 10×Ex Taq Buffer were purchased from Baori Doctor Biotechnology (Beijing) Co., Ltd., the product number is RR001A.

上述4组打靶位点DNA的PCR扩增反应的程序均为:95℃,5min;95℃,20s,72℃,20s,-1℃/循环(即每降低1℃,循环一次),72℃,25s,共10个循环;95℃,20s,62℃,20s,72℃,25s,共25个循环;72℃,5min,16℃,无穷。分别取5μL上述4组打靶位点DNA的PCR扩增产物进行质量百分数为1%的琼脂糖凝胶电泳检测,并以小鼠基因组DNA作为对照。The above four groups of PCR amplification reactions of target site DNA were as follows: 95°C, 5min; 95°C, 20s, 72°C, 20s, -1°C/cycle (that is, every 1°C decrease, cycle once), 72°C , 25s, a total of 10 cycles; 95°C, 20s, 62°C, 20s, 72°C, 25s, a total of 25 cycles; 72°C, 5min, 16°C, infinite. 5 μL of PCR amplification products of the above-mentioned 4 groups of target site DNA were respectively taken and detected by agarose gel electrophoresis with a mass percentage of 1%, and mouse genomic DNA was used as a control.

分别取上述4组打靶位点DNA的PCR产物进行Sanger测序,Sanger测序由上海百力格生物技术有限公司完成。如果打靶位点出现套峰,则初步确认发生了基因编辑。测序结果如图5-图8所示。测序结果表明,在设计的4个打靶位点中,与野生型打靶位点相比(如图9所示),仅有sgRNA2靶点发生了基因编辑(如图6所示),证明只有sgRNA2位点是可靠的基因编辑靶点,其它靶点不能用作基因编辑。The PCR products of the above-mentioned 4 groups of target site DNA were respectively taken for Sanger sequencing, and Sanger sequencing was completed by Shanghai Bailiger Biotechnology Co., Ltd. If a set of peaks appears at the target site, it is preliminarily confirmed that gene editing has occurred. The sequencing results are shown in Figures 5-8. The sequencing results showed that among the four designed targeting sites, compared with the wild-type targeting sites (as shown in Figure 9), only the sgRNA2 target underwent gene editing (as shown in Figure 6), proving that only sgRNA2 Sites are reliable gene editing targets, and other targets cannot be used for gene editing.

步骤6:TA克隆测序分析步骤5初步确认发生了基因编辑的打靶位点的基因型,并获得基因编辑后的小鼠细胞。Step 6: TA clone sequencing analysis Step 5 preliminarily confirms the genotype of the gene-edited target site, and obtains the gene-edited mouse cells.

将扩增sgRNA2靶点的PCR产物进行胶回收纯化,将纯化后的DNA进行连接,连接的反应体系为:PCR纯化产物40ng、Solution I 2.5μL和PMD19载体0.5μL,加水补充至5μL;然后16℃金属浴1h,得到连接产物。上述Solution I和PMD19载体可以市售购买,如可以购自宝日医生物技术(北京)有限公司,货号为6013。The PCR product of the amplified sgRNA2 target was recovered and purified by gel, and the purified DNA was ligated. The ligation reaction system was: 40 ng of the purified PCR product, 2.5 μL of Solution I and 0.5 μL of the PMD19 vector, supplemented with water to 5 μL; then 16 ℃ metal bath for 1 h to obtain the ligated product. Above-mentioned Solution I and PMD19 carrier can be purchased commercially, such as can be purchased from Bao Ri Doctor Biotechnology (Beijing) Co., Ltd., the article number is 6013.

取5μL连接产物快速加入到30μL感受态大肠杆菌中,充分混匀,冰上静置25min,42℃水浴热激90s,冰上冷却2min,加入150μL的LB液体培养基,转速为220转/min,37℃活化30min。然后,涂布于氨苄抗性的LB固体培养基(其中氨苄青霉素的浓度为50μg/mL)表面,37℃过夜培养20h后,进行菌落PCR反应验证。菌落PCR反应的体系为:菌落水溶液1μL,PremixTaq酶5μL,上游引物0.5μL,下游引物0.5μL,灭菌水补充至10μL。其中,所述菌落水溶液是取直径1mm的单克隆菌落溶解于10μL灭菌水中制备而成。上游引物的序列如SEQ ID NO.10所示,SEQ ID NO.10:Quickly add 5 μL of ligation product to 30 μL of competent E. coli, mix well, let stand on ice for 25 min, heat shock in 42°C water bath for 90 s, cool on ice for 2 min, add 150 μL of LB liquid medium, and rotate at 220 rpm , activated at 37°C for 30min. Then, it was coated on the surface of ampicillin-resistant LB solid medium (ampicillin concentration was 50 μg/mL), and after culturing overnight at 37° C. for 20 h, the colony PCR reaction was verified. The system of colony PCR reaction was: 1 μL of colony aqueous solution, 5 μL of PremixTaq enzyme, 0.5 μL of upstream primer, 0.5 μL of downstream primer, and sterilized water supplemented to 10 μL. Wherein, the colony aqueous solution is prepared by dissolving monoclonal colonies with a diameter of 1 mm in 10 μL of sterilized water. The sequence of the upstream primer is shown in SEQ ID NO.10, SEQ ID NO.10:

5'-gtaaaacgacggccagt-3'。下游引物的序列如SEQ ID NO.11所示,SEQ IDNO.11:5'-caggaaacagctatgac-3'。5'-gtaaaacgacggccagt-3'. The sequence of the downstream primer is shown in SEQ ID NO. 11, SEQ ID NO. 11: 5'-caggaaacagctatgac-3'.

上述上游引物和下游引物由上海百力格生物技术有限公司合成。上述Premix Taq酶购自宝日医生物技术(北京)有限公司,货号为R004Q。The above upstream primers and downstream primers were synthesized by Shanghai Bailiger Biotechnology Co., Ltd. The above-mentioned Premix Taq enzyme was purchased from Bao Ri Doctor Biotechnology (Beijing) Co., Ltd., the item number is R004Q.

菌落PCR反应的程序为:95℃,5min;95℃,20s,60℃,20s,72℃,25s,26个循环;72℃,5min,然后进行电泳鉴定。The procedure of colony PCR reaction was: 95°C, 5min; 95°C, 20s, 60°C, 20s, 72°C, 25s, 26 cycles; 72°C, 5min, and then electrophoresis identification.

筛选出阳性克隆,并将阳性克隆进行Sanger测序。Sanger测序由上海百力格生物技术有限公司完成。测序结果与原序列比对分析表明,在sg2靶点位置发生了碱基的随机插入和缺失,编辑效率为100%(如表4所示)。Positive clones were screened and subjected to Sanger sequencing. Sanger sequencing was performed by Shanghai Bailiger Biotechnology Co., Ltd. The alignment analysis between the sequencing results and the original sequence showed that random insertion and deletion of bases occurred at the sg2 target site, and the editing efficiency was 100% (as shown in Table 4).

表4 sgRNA2靶点基因型分析Table 4 Genotype analysis of sgRNA2 targets

Figure BDA0002260780620000181
Figure BDA0002260780620000181

注:加粗字体代表靶点序列;斜体字母代表插入序列。Note: Bold fonts represent target sequences; italic letters represent insertion sequences.

由此可见,sgRNA2导向序列可以介导Cas9蛋白,高效、特异性地切割靶点DNA,进而用于敲除小鼠G6pc基因,消除小鼠G6pc基因的表达。该sgRNA导向序列可以通过CRISPR/Cas9系统实现高效打靶,效率为100%。It can be seen that the sgRNA2 guide sequence can mediate the Cas9 protein to efficiently and specifically cut the target DNA, and then be used to knock out the mouse G6pc gene and eliminate the expression of the mouse G6pc gene. The sgRNA guide sequence can be efficiently targeted by the CRISPR/Cas9 system with an efficiency of 100%.

以上所述仅为本发明的较佳实施例,并不用以限制本发明,凡在本发明的精神和原则之内,所作的任何修改、等同替换、改进等,均应包含在本发明的保护范围之内。The above are only preferred embodiments of the present invention and are not intended to limit the present invention. Any modification, equivalent replacement, improvement, etc. made within the spirit and principle of the present invention shall be included in the protection of the present invention. within the range.

序列表sequence listing

<110> 桂林医学院<110> Guilin Medical College

<120> 一种特异靶向小鼠G6pc基因的sgRNA导向序列及其应用<120> A kind of sgRNA guide sequence specifically targeting mouse G6pc gene and its application

<160> 31<160> 31

<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0

<210> 1<210> 1

<211> 20<211> 20

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 1<400> 1

tgtttggaca acgcccgtat 20tgtttggaca acgcccgtat 20

<210> 2<210> 2

<211> 20<211> 20

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 2<400> 2

tgtccaggac ccaccaatac 20tgtccaggac ccaccaatac 20

<210> 3<210> 3

<211> 20<211> 20

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 3<400> 3

agctgaacgt ctgtctgtcc 20agctgaacgt ctgtctgtcc 20

<210> 4<210> 4

<211> 20<211> 20

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 4<400> 4

gtgagcagca aggtagatcc 20gtgagcagca aggtagatcc 20

<210> 5<210> 5

<211> 4951<211> 4951

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 5<400> 5

ggtaccgatt agtgaacgga tctcgacggt atcgatcacg agactagcct cgagcggccg 60ggtaccgatt agtgaacgga tctcgacggt atcgatcacg agactagcct cgagcggccg 60

cccccttcac cgagggccta tttcccatga ttccttcata tttgcatata cgatacaagg 120cccccttcac cgagggccta tttcccatga ttccttcata tttgcatata cgatacaagg 120

ctgttagaga gataattgga attaatttga ctgtaaacac aaagatatta gtacaaaata 180ctgttagaga gataattgga attaatttga ctgtaaacac aaagatatta gtacaaaata 180

cgtgacgtag aaagtaataa tttcttgggt agtttgcagt tttaaaatta tgttttaaaa 240cgtgacgtag aaagtaataa tttcttgggt agtttgcagt tttaaaatta tgttttaaaa 240

tggactatca tatgcttacc gtaacttgaa agtatttcga tttcttggct ttatatatct 300tggactatca tatgcttacc gtaacttgaa agtatttcga tttcttggct ttatatatct 300

tgtggaaagg acgaaacacc gggagaccga gagagggtct cagttttaga gctagaaata 360tgtggaaagg acgaaacacc gggagaccga gagagggtct cagttttaga gctagaaata 360

gcaagttaaa ataaggctag tccgttatca acttgaaaaa gtggcaccga gtcggtgctt 420gcaagttaaa ataaggctag tccgttatca acttgaaaaa gtggcaccga gtcggtgctt 420

tttttaaaga attctcgacc tcgagacaaa tggcagtatt catccacaat tttaaaagaa 480tttttaaaga attctcgacc tcgagacaaa tggcagtatt catccacaat tttaaaagaa 480

aaggggggat tggggggtac agtgcagggg aaagaatagt agacataata gcaacagaca 540aaggggggat tggggggtac agtgcagggg aaagaatagt agacataata gcaacagaca 540

tacaaactaa agaattacaa aaacaaatta caaaaattca aaattttcgg gtttattaca 600tacaaactaa agaattacaa aaacaaatta caaaaattca aaattttcgg gtttattaca 600

gggacagcag agatccactt tggccgcggc tcgagggggt tggggttgcg ccttttccaa 660gggacagcag agatccactt tggccgcggc tcgagggggt tggggttgcg ccttttccaa 660

ggcagccctg ggtttgcgca gggacgcggc tgctctgggc gtggttccgg gaaacgcagc 720ggcagccctg ggtttgcgca gggacgcggc tgctctgggc gtggttccgg gaaacgcagc 720

ggcgccgacc ctgggactcg cacattcttc acgtccgttc gcagcgtcac ccggatcttc 780ggcgccgacc ctgggactcg cacattcttc acgtccgttc gcagcgtcac ccggatcttc 780

gccgctaccc ttgtgggccc cccggcgacg cttcctgctc cgcccctaag tcgggaaggt 840gccgctaccc ttgtgggccc cccggcgacg cttcctgctc cgcccctaag tcgggaaggt 840

tccttgcggt tcgcggcgtg ccggacgtga caaacggaag ccgcacgtct cactagtacc 900tccttgcggt tcgcggcgtg ccggacgtga caaacggaag ccgcacgtct cactagtacc 900

ctcgcagacg gacagcgcca gggagcaatg gcagcgcgcc gaccgcgatg ggctgtggcc 960ctcgcagacg gacagcgcca gggagcaatg gcagcgcgcc gaccgcgatg ggctgtggcc 960

aatagcggct gctcagcagg gcgcgccgag agcagcggcc gggaaggggc ggtgcgggag 1020aatagcggct gctcagcagg gcgcgccgag agcagcggcc gggaaggggc ggtgcgggag 1020

gcggggtgtg gggcggtagt gtgggccctg ttcctgcccg cgcggtgttc cgcattctgc 1080gcggggtgtg gggcggtagt gtgggccctg ttcctgcccg cgcggtgttc cgcattctgc 1080

aagcctccgg agcgcacgtc ggcagtcggc tccctcgttg accgaatcac cgacctctct 1140aagcctccgg agcgcacgtc ggcagtcggc tccctcgttg accgaatcac cgacctctct 1140

ccccaggggg atccaccgga gcttaccatg accgagtaca agcccacggt gcgcctcgcc 1200ccccaggggg atccaccgga gcttaccatg accgagtaca agcccacggt gcgcctcgcc 1200

acccgcgacg acgtccccag ggccgtacgc accctcgccg ccgcgttcgc cgactacccc 1260acccgcgacg acgtccccag ggccgtacgc accctcgccg ccgcgttcgc cgactacccc 1260

gccacgcgcc acaccgtcga tccggaccgc cacatcgagc gggtcaccga gctgcaagaa 1320gccacgcgcc acaccgtcga tccggaccgc cacatcgagc gggtcaccga gctgcaagaa 1320

ctcttcctca cgcgcgtcgg gctcgacatc ggcaaggtgt gggtcgcgga cgacggcgcc 1380ctcttcctca cgcgcgtcgg gctcgacatc ggcaaggtgt gggtcgcgga cgacggcgcc 1380

gcggtggcgg tctggaccac gccggagagc gtcgaagcgg gggcggtgtt cgccgagatc 1440gcggtggcgg tctggaccac gccggagagc gtcgaagcgg gggcggtgtt cgccgagatc 1440

ggcccgcgca tggccgagtt gagcggttcc cggctggccg cgcagcaaca gatggaaggc 1500ggcccgcgca tggccgagtt gagcggttcc cggctggccg cgcagcaaca gatggaaggc 1500

ctcctggcgc cgcaccggcc caaggagccc gcgtggttcc tggccaccgt cggcgtctcg 1560ctcctggcgc cgcaccggcc caaggagccc gcgtggttcc tggccaccgt cggcgtctcg 1560

cccgaccacc agggcaaggg tctgggcagc gccgtcgtgc tccccggagt ggaggcggcc 1620cccgaccacc agggcaaggg tctgggcagc gccgtcgtgc tccccggagt ggaggcggcc 1620

gagcgcgccg gggtgcccgc cttcctggaa acctccgcgc cccgcaacct ccccttctac 1680gagcgcgccg gggtgcccgc cttcctggaa acctccgcgc cccgcaacct ccccttctac 1680

gagcggctcg gcttcaccgt caccgccgac gtcgaggtgc ccgaaggacc gcgcacctgg 1740gagcggctcg gcttcaccgt caccgccgac gtcgaggtgc ccgaaggacc gcgcacctgg 1740

tgcatgaccc gcaagcccgg tgcctgacgc ccgccccacg acccgcagcg cccgaccgaa 1800tgcatgaccc gcaagcccgg tgcctgacgc ccgccccacg acccgcagcg cccgaccgaa 1800

aggagcgcac gaccccatgc atcggtacct ttaagaccaa tgacttacaa ggcagctgta 1860aggagcgcac gaccccatgc atcggtacct ttaagaccaa tgacttacaa ggcagctgta 1860

gatcttagcc actttctaga gtcggggcgg ccggccgctt cgagcagaca tgataagata 1920gatcttagcc actttctaga gtcggggcgg ccggccgctt cgagcagaca tgataagata 1920

cattgatgag tttggacaaa ccacaactag aatgcagtga aaaaaatgct ttatttgtga 1980cattgatgag tttggacaaa ccacaactag aatgcagtga aaaaaatgct ttatttgtga 1980

aatttgtgat gctattgctt tatttgtaac cattataagc tgcaataaac aagttaacaa 2040aatttgtgat gctattgctt tatttgtaac cattataagc tgcaataaac aagttaacaa 2040

caacaattgc attcatttta tgtttcaggt tcagggggag gtgtgggagg ttttttaaag 2100caacaattgc attcatttta tgtttcaggt tcagggggag gtgtgggagg ttttttaaag 2100

caagtaaaac ctctacaaat gtggtaaaat cgataaggat ccgtcgaccg atgcccttga 2160caagtaaaac ctctacaaat gtggtaaaat cgataaggat ccgtcgaccg atgcccttga 2160

gagccttcaa cccagtcagc tccttccggt gggcgcgggg catgactatc gtcgccgcac 2220gagccttcaa cccagtcagc tccttccggt gggcgcgggg catgactatc gtcgccgcac 2220

ttatgactgt cttctttatc atgcaactcg taggacaggt gccggcagcg ctcttccgct 2280ttatgactgt cttctttatc atgcaactcg taggacaggt gccggcagcg ctcttccgct 2280

tcctcgctca ctgactcgct gcgctcggtc gttcggctgc ggcgagcggt atcagctcac 2340tcctcgctca ctgactcgct gcgctcggtc gttcggctgc ggcgagcggt atcagctcac 2340

tcaaaggcgg taatacggtt atccacagaa tcaggggata acgcaggaaa gaacatgtga 2400tcaaaggcgg taatacggtt atccacagaa tcaggggata acgcaggaaa gaacatgtga 2400

gcaaaaggcc agcaaaaggc caggaaccgt aaaaaggccg cgttgctggc gtttttccat 2460gcaaaaggcc agcaaaaggc caggaaccgt aaaaaggccg cgttgctggc gtttttccat 2460

aggctccgcc cccctgacga gcatcacaaa aatcgacgct caagtcagag gtggcgaaac 2520aggctccgcc cccctgacga gcatcacaaa aatcgacgct caagtcagag gtggcgaaac 2520

ccgacaggac tataaagata ccaggcgttt ccccctggaa gctccctcgt gcgctctcct 2580ccgacaggac tataaagata ccaggcgttt ccccctggaa gctccctcgt gcgctctcct 2580

gttccgaccc tgccgcttac cggatacctg tccgcctttc tcccttcggg aagcgtggcg 2640gttccgaccc tgccgcttac cggatacctg tccgcctttc tcccttcggg aagcgtggcg 2640

ctttctcaat gctcacgctg taggtatctc agttcggtgt aggtcgttcg ctccaagctg 2700ctttctcaat gctcacgctg taggtatctc agttcggtgt aggtcgttcg ctccaagctg 2700

ggctgtgtgc acgaaccccc cgttcagccc gaccgctgcg ccttatccgg taactatcgt 2760ggctgtgtgc acgaaccccc cgttcagccc gaccgctgcg ccttatccgg taactatcgt 2760

cttgagtcca acccggtaag acacgactta tcgccactgg cagcagccac tggtaacagg 2820cttgagtcca acccggtaag acacgactta tcgccactgg cagcagccac tggtaacagg 2820

attagcagag cgaggtatgt aggcggtgct acagagttct tgaagtggtg gcctaactac 2880attagcagag cgaggtatgt aggcggtgct acagagttct tgaagtggtg gcctaactac 2880

ggctacacta gaaggacagt atttggtatc tgcgctctgc tgaagccagt taccttcgga 2940ggctacacta gaaggacagt atttggtatc tgcgctctgc tgaagccagt taccttcgga 2940

aaaagagttg gtagctcttg atccggcaaa caaaccaccg ctggtagcgg tggttttttt 3000aaaagagttg gtagctcttg atccggcaaa caaaccaccg ctggtagcgg tggtttttttt 3000

gtttgcaagc agcagattac gcgcagaaaa aaaggatctc aagaagatcc tttgatcttt 3060gtttgcaagc agcagattac gcgcagaaaa aaaggatctc aagaagatcc tttgatcttt 3060

tctacggggt ctgacgctca gtggaacgaa aactcacgtt aagggatttt ggtcatgaga 3120tctacggggt ctgacgctca gtggaacgaa aactcacgtt aagggatttt ggtcatgaga 3120

ttatcaaaaa ggatcttcac ctagatcctt ttaaattaaa aatgaagttt taaatcaatc 3180ttatcaaaaa ggatcttcac ctagatcctt ttaaattaaa aatgaagttt taaatcaatc 3180

taaagtatat atgagtaaac ttggtctgac agttaccaat gcttaatcag tgaggcacct 3240taaagtatat atgagtaaac ttggtctgac agttaccaat gcttaatcag tgaggcacct 3240

atctcagcga tctgtctatt tcgttcatcc atagttgcct gactccccgt cgtgtagata 3300atctcagcga tctgtctatt tcgttcatcc atagttgcct gactccccgt cgtgtagata 3300

actacgatac gggagggctt accatctggc cccagtgctg caatgatacc gcgggaccca 3360actacgatac gggagggctt accatctggc cccagtgctg caatgatacc gcgggaccca 3360

cgctcaccgg ctccagattt atcagcaata aaccagccag ccggaagggc cgagcgcaga 3420cgctcaccgg ctccagattt atcagcaata aaccagccag ccggaagggc cgagcgcaga 3420

agtggtcctg caactttatc cgcctccatc cagtctatta attgttgccg ggaagctaga 3480agtggtcctg caactttatc cgcctccatc cagtctatta attgttgccg ggaagctaga 3480

gtaagtagtt cgccagttaa tagtttgcgc aacgttgttg ccattgctac aggcatcgtg 3540gtaagtagtt cgccagttaa tagtttgcgc aacgttgttg ccattgctac aggcatcgtg 3540

gtgtcacgct cgtcgtttgg tatggcttca ttcagctccg gttcccaacg atcaaggcga 3600gtgtcacgct cgtcgtttgg tatggcttca ttcagctccg gttcccaacg atcaaggcga 3600

gttacatgat cccccatgtt gtgcaaaaaa gcggttagct ccttcggtcc tccgatcgtt 3660gttacatgat cccccatgtt gtgcaaaaaa gcggttagct ccttcggtcc tccgatcgtt 3660

gtcagaagta agttggccgc agtgttatca ctcatggtta tggcagcact gcataattct 3720gtcagaagta agttggccgc agtgttatca ctcatggtta tggcagcact gcataattct 3720

cttactgtca tgccatccgt aagatgcttt tctgtgactg gtgagtactc aaccaagtca 3780cttactgtca tgccatccgt aagatgcttt tctgtgactg gtgagtactc aaccaagtca 3780

ttctgagaat agtgtatgcg gcgaccgagt tgctcttgcc cggcgtcaat acgggataat 3840ttctgagaat agtgtatgcg gcgaccgagt tgctcttgcc cggcgtcaat acgggataat 3840

accgcgccac atagcagaac tttaaaagtg ctcatcattg gaaaacgttc ttcggggcga 3900accgcgccac atagcagaac tttaaaagtg ctcatcattg gaaaacgttc ttcggggcga 3900

aaactctcaa ggatcttacc gctgttgaga tccagttcga tgtaacccac tcgtgcaccc 3960aaactctcaa ggatcttacc gctgttgaga tccagttcga tgtaacccac tcgtgcaccc 3960

aactgatctt cagcatcttt tactttcacc agcgtttctg ggtgagcaaa aacaggaagg 4020aactgatctt cagcatcttt tactttcacc agcgtttctg ggtgagcaaa aacaggaagg 4020

caaaatgccg caaaaaaggg aataagggcg acacggaaat gttgaatact catactcttc 4080caaaatgccg caaaaaaggg aataagggcg acacggaaat gttgaatact catactcttc 4080

ctttttcaat attattgaag catttatcag ggttattgtc tcatgagcgg atacatattt 4140ctttttcaat attattgaag catttatcag ggttattgtc tcatgagcgg atacatattt 4140

gaatgtattt agaaaaataa acaaataggg gttccgcgca catttccccg aaaagtgcca 4200gaatgtattt agaaaaataa acaaataggg gttccgcgca catttccccg aaaagtgcca 4200

cctgacgcgc cctgtagcgg cgcattaagc gcggcgggtg tggtggttac gcgcagcgtg 4260cctgacgcgc cctgtagcgg cgcattaagc gcggcgggtg tggtggttac gcgcagcgtg 4260

accgctacac ttgccagcgc cctagcgccc gctcctttcg ctttcttccc ttcctttctc 4320accgctacac ttgccagcgc cctagcgccc gctcctttcg ctttcttccc ttcctttctc 4320

gccacgttcg ccggctttcc ccgtcaagct ctaaatcggg ggctcccttt agggttccga 4380gccacgttcg ccggctttcc ccgtcaagct ctaaatcggg ggctcccttt agggttccga 4380

tttagtgctt tacggcacct cgaccccaaa aaacttgatt agggtgatgg ttcacgtagt 4440tttagtgctt tacggcacct cgaccccaaa aaacttgatt agggtgatgg ttcacgtagt 4440

gggccatcgc cctgatagac ggtttttcgc cctttgacgt tggagtccac gttctttaat 4500gggccatcgc cctgatagac ggttttttcgc cctttgacgt tggagtccac gttctttaat 4500

agtggactct tgttccaaac tggaacaaca ctcaacccta tctcggtcta ttcttttgat 4560agtggactct tgttccaaac tggaacaaca ctcaacccta tctcggtcta ttcttttgat 4560

ttataaggga ttttgccgat ttcggcctat tggttaaaaa atgagctgat ttaacaaaaa 4620ttataaggga ttttgccgat ttcggcctat tggttaaaaa atgagctgat ttaacaaaaa 4620

tttaacgcga attttaacaa aatattaacg tttacaattt cccattcgcc attcaggctg 4680tttaacgcga attttaacaa aatattaacg tttacaattt cccattcgcc attcaggctg 4680

cgcaactgtt gggaagggcg atcggtgcgg gcctcttcgc tattacgcca gcccaagcta 4740cgcaactgtt gggaagggcg atcggtgcgg gcctcttcgc tattacgcca gcccaagcta 4740

ccatgataag taagtaatat taaggtacgg gaggtacttg gagcggccgc aataaaatat 4800ccatgataag taagtaatat taaggtacgg gaggtacttg gagcggccgc aataaaatat 4800

ctttattttc attacatctg tgtgttggtt ttttgtgtga atcgatagta ctaacatacg 4860ctttattttc attacatctg tgtgttggtt ttttgtgtga atcgatagta ctaacatacg 4860

ctctccatca aaacaaaacg aaacaaaaca aactagcaaa ataggctgtc cccagtgcaa 4920ctctccatca aaacaaaacg aaacaaaaca aactagcaaa ataggctgtc cccagtgcaa 4920

gtgcaggtgc cagaacattt ctctatcgat a 4951gtgcaggtgc cagaacattt ctctatcgat a 4951

<210> 6<210> 6

<211> 24<211> 24

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 6<400> 6

atggactatc atatgcttac cgta 24atggactatc atatgcttac cgta 24

<210> 7<210> 7

<211> 9317<211> 9317

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 7<400> 7

agcgcccaat acgcaaaccg cctctccccg cgcgttggcc gattcattaa tgcagctggc 60agcgcccaat acgcaaaccg cctctccccg cgcgttggcc gattcattaa tgcagctggc 60

acgacaggtt tcccgactgg aaagcgggca gtgagcgcaa cgcaattaat gtgagttagc 120acgacaggtt tcccgactgg aaagcgggca gtgagcgcaa cgcaattaat gtgagttagc 120

tcactcatta ggcaccccag gctttacact ttatgcttcc ggctcgtatg ttgtgtggaa 180tcactcatta ggcaccccag gctttacact ttatgcttcc ggctcgtatg ttgtgtggaa 180

ttgtgagcgg ataacaattt cacacaggaa acagctatga ccatgattac gccaagctct 240ttgtgagcgg ataacaattt cacacaggaa acagctatga ccatgattac gccaagctct 240

agctagaggt cgacggtata cagacatgat aagatacatt gatgagtttg gacaaaccac 300agctagaggt cgacggtata cagacatgat aagatacatt gatgagtttg gacaaaccac 300

aactagaatg cagtgaaaaa aatgctttat ttgtgaaatt tgtgatgcta ttgctttatt 360aactagaatg cagtgaaaaa aatgctttat ttgtgaaatt tgtgatgcta ttgctttatt 360

tgtaaccatt ataagctgca ataaacaagt tggggtgggc gaagaactcc agcatgagat 420tgtaaccatt ataagctgca ataaacaagt tggggtgggc gaagaactcc agcatgagat 420

ccccgcgctg gaggatcatc cagccggcgt cccggaaaac gattccgaag cccaaccttt 480ccccgcgctg gaggatcatc cagccggcgt cccggaaaac gattccgaag cccaaccttt 480

catagaaggc ggcggtggaa tcgaaatctc gtagcacgtg tcagtcctgc tcctcggcca 540catagaaggc ggcggtggaa tcgaaatctc gtagcacgtg tcagtcctgc tcctcggcca 540

cgaagtgctt agccctccca cacataacca gagggcagca attcacgaat cccaactgcc 600cgaagtgctt agccctccca cacataacca gagggcagca attcacgaat cccaactgcc 600

gtcggctgtc catcactgtc cttcactatg gctttgatcc caggatgcag atcgagaagc 660gtcggctgtc catcactgtc cttcactatg gctttgatcc caggatgcag atcgagaagc 660

acctgtcggc accgtccgca ggggctcaag atgcccctgt tctcatttcc gatcgcgacg 720acctgtcggc accgtccgca ggggctcaag atgcccctgt tctcatttcc gatcgcgacg 720

atacaagtca ggttgccagc tgccgcagca gcagcagtgc ccagcaccac gagttctgca 780atacaagtca ggttgccagc tgccgcagca gcagcagtgc ccagcaccac gagttctgca 780

caaggtcccc cagtaaaatg atatacattg acaccagtga agatgcggcc gtcgctagag 840caaggtcccc cagtaaaatg atatacattg acaccagtga agatgcggcc gtcgctagag 840

agagctgcgc tggcgacgct gtagtcttca gagatgggga tgctgttgat tgtagccgtt 900agagctgcgc tggcgacgct gtagtcttca gagatgggga tgctgttgat tgtagccgtt 900

gctctttcaa tgagggtgga ttcttcttga gacaaaggct tggccatggt ttagttcctc 960gctctttcaa tgagggtgga ttcttcttga gacaaaggct tggccatggt ttagttcctc 960

accttgtcgt attatactat gccgatatac tatgccgatg attaattgtc aacacgtgct 1020accttgtcgt attatactat gccgatatac tatgccgatg attaattgtc aacacgtgct 1020

gatcagatcc gaaaatggat atacaagctc ccgggagctt tttgcaaaag cctaggcctc 1080gatcagatcc gaaaatggat atacaagctc ccgggagctt tttgcaaaag cctaggcctc 1080

caaaaaagcc tcctcactac ttctggaata gctcagaggc agaggcggcc tcggcctctg 1140caaaaaagcc tcctcactac ttctggaata gctcagaggc agaggcggcc tcggcctctg 1140

cataaataaa aaaaattagt cagccatggg gcggagaatg ggcggaactg ggcggagtta 1200cataaataaa aaaaattagt cagccatggg gcggagaatg ggcggaactg ggcggagtta 1200

ggggcgggat gggcggagtt aggggcggga ctatggttgc tgactaattg agatgcatgc 1260ggggcgggat gggcggagtt aggggcggga ctatggttgc tgactaattg agatgcatgc 1260

tttgcatact tctgcctgct ggggagcctg gggactttcc acacctggtt gctgactaat 1320tttgcatact tctgcctgct ggggagcctg gggactttcc acacctggtt gctgactaat 1320

tgagatgcat gctttgcata cttctgcctg ctggggagcc tggggacttt ccacacccta 1380tgagatgcat gctttgcata cttctgcctg ctggggagcc tggggacttt ccacacccta 1380

actgacacac attccacaga attaattcgc gttaaatttt tgttaaatca gctcattttt 1440actgacacac attccacaga attaattcgc gttaaatttt tgttaaatca gctcattttt 1440

taaccaatag gccgaaatcg gcaaaatccc ttataaatca aaagaataga ccgagatagg 1500taaccaatag gccgaaatcg gcaaaatccc ttataaatca aaagaataga ccgagatagg 1500

gttgagtgtt gttccagttt ggaacaagag tccactatta aagaacgtgg actccaacgt 1560gttgagtgtt gttccagttt ggaacaagag tccactatta aagaacgtgg actccaacgt 1560

caaagggcga aaaaccgtct atcagggcga tggcccacta cgtgaaccat caccctaatc 1620caaagggcga aaaaccgtct atcagggcga tggcccacta cgtgaaccat caccctaatc 1620

aagttttttg gggtcgaggt gccgtaaagc actaaatcgg aaccctaaag ggagcccccg 1680aagttttttg gggtcgaggt gccgtaaagc actaaatcgg aaccctaaag ggagcccccg 1680

atttagagct tgacggggaa agccggcgaa cgtggcgaga aaggaaggga agaaagcgaa 1740atttagagct tgacgggggaa agccggcgaa cgtggcgaga aaggaaggga agaaagcgaa 1740

aggagcgggc gctagggcgc tggcaagtgt agcggtcacg ctgcgcgtaa ccaccacacc 1800aggagcgggc gctagggcgc tggcaagtgt agcggtcacg ctgcgcgtaa ccaccacacc 1800

cgccgcgctt aatgcgccgc tacagggcgc gtggggatac cccctagagc cccagctggt 1860cgccgcgctt aatgcgccgc tacagggcgc gtggggatac cccctagagc cccagctggt 1860

tctttccgcc tcagaagcca tagagcccac cgcatcccca gcatgcctgc tattgtcttc 1920tctttccgcc tcagaagcca tagagcccac cgcatcccca gcatgcctgc tattgtcttc 1920

ccaatcctcc cccttgctgt cctgccccac cccacccccc agaatagaat gacacctact 1980ccaatcctcc cccttgctgt cctgccccac cccacccccc agaatagaat gacacctact 1980

cagacaatgc gatgcaattt cctcatttta ttaggaaagg acagtgggag tggcaccttc 2040cagacaatgc gatgcaattt cctcatttta ttaggaaagg acagtgggag tggcaccttc 2040

cagggtcaag gaaggcacgg gggaggggca aacaacagat ggctggcaac tagaaggcac 2100cagggtcaag gaaggcacgg gggaggggca aacaacagat ggctggcaac tagaaggcac 2100

agtcgaggct gatcagcggg tttaaactca atggtgatgg tgatgatgac cggtacgcgt 2160agtcgaggct gatcagcggg tttaaactca atggtgatgg tgatgatgac cggtacgcgt 2160

agaatcgaga ccgaggagag ggttagggat aggcttacct tcgaagggcc cctagtcgcc 2220agaatcgaga ccgaggagag ggttagggat aggcttacct tcgaagggcc cctagtcgcc 2220

gccgagctga gacaggtcga tgcgagtctc gtacagtccg gtaattgact ggtgtatcag 2280gccgagctga gacaggtcga tgcgagtctc gtacagtccg gtaattgact ggtgtatcag 2280

ggtggcatcg agaacttctt tggtagaggt gtaccgcttc ctgtcaatag ttgtatcgaa 2340ggtggcatcg agaacttctt tggtagaggt gtaccgcttc ctgtcaatag ttgtatcgaa 2340

atacttgaag gcagcaggag cgcccagatt agtcagagta aagaggtgga taatattctc 2400atacttgaag gcagcaggag cgcccagatt agtcagagta aagaggtgga taatattctc 2400

tgcttgttcg cgaattggct tgtccctgtg cttattatat gcgctcagca ctttatcgag 2460tgcttgttcg cgaattggct tgtccctgtg cttattatat gcgctcagca ctttatcgag 2460

gtttgcatcg gccagaataa cccgcttgct gaactcgcta atctgttcaa tgatttcgtc 2520gtttgcatcg gccagaataa cccgcttgct gaactcgcta atctgttcaa tgatttcgtc 2520

caggtagtgt ttatgttgct caacaaagag ttgcttctgc tcattgtctt cagggctacc 2580caggtagtgt ttatgttgct caacaaagag ttgcttctgc tcattgtctt cagggctacc 2580

tttgagtttc tcgtagtggg aggccagata caggaagttc acgtatttgg agggcagagc 2640tttgagtttc tcgtagtggg aggccagata caggaagttc acgtatttgg agggcagagc 2640

cagctcgttt cctttctgca gctctccggc ggaggccagc atccgcttcc taccattctc 2700cagctcgttt cctttctgca gctctccggc ggaggccagc atccgcttcc taccattctc 2700

cagctcaaag agagagtact tgggcagttt gatgatgaga tctttcttca cttctttata 2760cagctcaaag agagagtact tgggcagttt gatgatgaga tctttcttca cttctttata 2760

gcccttagct tccaggaaat cgattggatt cttctcgaag ctggatctct ccataatagt 2820gcccttagct tccaggaaat cgattggatt cttctcgaag ctggatctct ccataatagt 2820

aattccgagc agctccttaa cagacttgag tttcttggac ttgcctttct ccacttttgc 2880aattccgagc agctccttaa cagacttgag tttcttggac ttgcctttct ccacttttgc 2880

cacgaccaga acggaataag ccactgtagg ggaatcgaaa ccgccatact tctttgggtc 2940cacgaccaga acggaataag ccactgtagg ggaatcgaaa ccgccatact tctttgggtc 2940

ccaatctttc ttcctggcga tcagcttgtc agagttccgc tttggcagga tgctctcctt 3000ccaatctttc ttcctggcga tcagcttgtc agagttccgc tttggcagga tgctctcctt 3000

tgagaatccg ccggtctgca cttcggtctt cttcacgata ttgacttgtg gcatggacag 3060tgagaatccg ccggtctgca cttcggtctt cttcacgata ttgacttgtg gcatggacag 3060

caccttccgc acagttgcga agtccctgcc tttatcccac acgatttctc ctgtttctcc 3120caccttccgc acagttgcga agtccctgcc tttatcccac acgatttctc ctgtttctcc 3120

gtttgtttcg atcagtgggc gcttccggat ttcgccgtta gccagggtta tctcagtctt 3180gtttgtttcg atcagtgggc gcttccggat ttcgccgtta gccagggtta tctcagtctt 3180

aaagaaattc atgatattag agtagaagaa gtacttggcg gtggctttgc caatctcttg 3240aaagaaattc atgatattag agtagaagaa gtacttggcg gtggctttgc caatctcttg 3240

ctcagacttt gctatcatct tcctcacatc gtagacttta tagtcaccgt acacgaactc 3300ctcagacttt gctatcatct tcctcacatc gtagacttta tagtcaccgt acacgaactc 3300

agactccagt ttagggtatt tcttgatcag ggcggtgcca acgacagcat tgagataggc 3360agactccagt ttagggtatt tcttgatcag ggcggtgcca acgacagcat tgagataggc 3360

atcgtgagca tgatggtaat tgtttatttc gcgaactttg tagaattgaa agtccttccg 3420atcgtgagca tgatggtaat tgtttatttc gcgaactttg tagaattgaa agtccttccg 3420

gaagtcagac accagcttgc tcttcagagt tatcactttc acttccctga tcagcttatc 3480gaagtcagac accagcttgc tcttcagagt tatcactttc acttccctga tcagcttatc 3480

gttctcatcg tacttagtgt tcatcctaga gtcgaggatt tgtgccacgt gtttggtaat 3540gttctcatcg tacttagtgt tcatcctaga gtcgaggatt tgtgccacgt gtttggtaat 3540

ctggcgtgtt tcgaccagtt gcctcttaat aaagccggcc ttgtcgagtt cgctcagacc 3600ctggcgtgtt tcgaccagtt gcctcttaat aaagccggcc ttgtcgagtt cgctcagacc 3600

tcctctttct gccttagtca gattgtcaaa cttccgctgg gtgatcagtt tggcgttgag 3660tcctctttct gccttagtca gattgtcaaa cttccgctgg gtgatcagtt tggcgttgag 3660

gagctgccgc cagtaattct tcatcttctt gaccacctct tctgatggaa cattgtcaga 3720gagctgccgc cagtaattct tcatcttctt gaccacctct tctgatggaa cattgtcaga 3720

cttaccgcga ttcttatcgg atctggtcag caccttgttg tcaatggagt catctttgag 3780cttaccgcga ttcttatcgg atctggtcag caccttgttg tcaatggagt catctttgag 3780

gaaggactgt ggaacaatat ggtccacgtc ataatcggac agccggttga tgtcgagttc 3840gaaggactgt ggaacaatat ggtccacgtc ataatcggac agccggttga tgtcgagttc 3840

ctggtcaacg tacatgtccc gcccgttctg gaggtagtac aggtagagtt tctcgttctg 3900ctggtcaacg tacatgtccc gcccgttctg gaggtagtac aggtagagtt tctcgttctg 3900

gagctgtgta ttctccacag ggtgctcctt cagtatctga gatcccagct ccttaattcc 3960gagctgtgta ttctccacag ggtgctcctt cagtatctga gatcccagct ccttaattcc 3960

ctcttcgatt cttttcatcc gttcccgaga gttcttctgg cccttctggg tggtttggtt 4020ctcttcgatt cttttcatcc gttcccgaga gttcttctgg cccttctggg tggtttggtt 4020

ctcccttgcc atttcgataa cgatattctc tggcttgtgc cgacccatca ctttgacgag 4080ctcccttgcc atttcgataa cgatattctc tggcttgtgc cgacccatca ctttgacgag 4080

ttcgtccacg accttgactg tctgcagtat tcccttcttt atggcgggtg atccagcgag 4140ttcgtccacg accttgactg tctgcagtat tcccttcttt atggcgggtg atccagcgag 4140

gttggcgatg tgctcgtgca ggctgtcgcc ttgaccgctc acctgtgcct tctggatgtc 4200gttggcgatg tgctcgtgca ggctgtcgcc ttgaccgctc acctgtgcct tctggatgtc 4200

ctctttaaat gtcagagagt catcgtgaat cagttgcatg aagttcctgt tagcgaatcc 4260ctctttaaat gtcagagagt catcgtgaat cagttgcatg aagttcctgt tagcgaatcc 4260

gtcggatttc aggaaatcca ggatggtctt tccgctctgt ttgtcgcgga tgccgtttat 4320gtcggatttc aggaaatcca ggatggtctt tccgctctgt ttgtcgcgga tgccgtttat 4320

gagtttcctg gagagtctac cccacccagt gtagcgccgc cgcttgagct gtttcatgac 4380gagtttcctg gagagtctac cccacccagt gtagcgccgc cgcttgagct gtttcatgac 4380

tttatcgtca aacagatggg cataggtctt caggcgctct tcgatcatct ctctatcctc 4440tttatcgtca aacagatggg cataggtctt caggcgctct tcgatcatct ctctatcctc 4440

gaacagagtc agggtcagca cgatatcttc caggatgtcc tcgttctcct cattatcgag 4500gaacagagtc agggtcagca cgatatcttc caggatgtcc tcgttctcct cattatcgag 4500

gaaatctttg tctttgatta tcttcagcag atcatggtaa gtgcccaggc tggcattaaa 4560gaaatctttg tctttgatta tcttcagcag atcatggtaa gtgcccaggc tggcattaaa 4560

gcggtcctcc acgccagaga tttccactga gtcaaagcat tcgatcttct taaagtaatc 4620gcggtcctcc acgccagaga tttccactga gtcaaagcat tcgatcttct taaagtaatc 4620

ctccttgagc tgcttcactg tcacctttct attagtcttg aagagcagat caacgatagc 4680ctccttgagc tgcttcactg tcacctttct attagtcttg aagagcagat caacgatagc 4680

cttcttctgc tctccggaca ggaaggcagg cttcctcatg ccctcggtca cgtacttcac 4740cttcttctgc tctccggaca ggaaggcagg cttcctcatg ccctcggtca cgtacttcac 4740

tttagtcagc tcgttataga cggtgaaata ctcgtacagg agtgaatgtt tgggcaggac 4800tttagtcagc tcgttataga cggtgaaata ctcgtacagg agtgaatgtt tgggcaggac 4800

cttctcgttg ggcaggttct tatcgaaatt ggtcatccgt tcgatgaatg actgggcgct 4860cttctcgttg ggcaggttct tatcgaaatt ggtcatccgt tcgatgaatg actgggcgct 4860

tgcgccctta tccacgacct cttcgaagtt ccaaggagta attgtctcct cagatttcct 4920tgcgccctta tccacgacct cttcgaagtt ccaaggagta attgtctcct cagatttcct 4920

ggtcatccaa gcgaagcggg agttgcctct agccagaggg ccgacgtaat aagggatcct 4980ggtcatccaa gcgaagcggg agttgcctct agccagaggg ccgacgtaat aagggatcct 4980

gaaggtcagg atcttctcta tcttctcccg gttatccttc aggaaaggat agaaatcctc 5040gaaggtcagg atcttctcta tcttctcccg gttatccttc aggaaaggat agaaatcctc 5040

ctgcctgcgg aggattgcat gcagctctcc caggtgtatc tgatgtggaa tggagccatt 5100ctgcctgcgg aggattgcat gcagctctcc caggtgtatc tgatgtggaa tggagccatt 5100

atcaaaggtc ctctgcttcc tcagcaggtc ctccctgttc agcttcacca gcagctcttc 5160atcaaaggtc ctctgcttcc tcagcaggtc ctccctgttc agcttcacca gcagctcttc 5160

agtaccgtcc atcttctcga ggattggttt gatgaacttg taaaattctt cctgtgatgc 5220agtaccgtcc atcttctcga ggattggttt gatgaacttg taaaattctt cctgtgatgc 5220

tccgccatcg atgtatccgg catatccatt cttgctctgg tcgaagaata tctctttgta 5280tccgccatcg atgtatccgg catatccatt cttgctctgg tcgaagaata tctctttgta 5280

cttctctggc agctgttgcc tcacgagggc tttgagcaga gtcaggtctt gatggtgttc 5340cttctctggc agctgttgcc tcacgagggc tttgagcaga gtcaggtctt gatggtgttc 5340

atcatagcgt tttatcatgg aggcgctcag aggtgctttg gtgatctcag tgttgacccg 5400atcatagcgt tttatcatgg aggcgctcag aggtgctttg gtgatctcag tgttgacccg 5400

gagtatgtcg ctcagcagaa tggcgtcgga gagattctta gcagccagaa agagatcggc 5460gagtatgtcg ctcagcagaa tggcgtcgga gagattctta gcagccagaa agagatcggc 5460

gtactggtcg cctatctgtg cgagcaggtt gtccagatca tcgtcatagg tgtccttgga 5520gtactggtcg cctatctgtg cgagcaggtt gtccagatca tcgtcatagg tgtccttgga 5520

gagctggagt ttagcatctt cggccagatc aaaattggac ttgaagttag gtgtcaggcc 5580gagctggagt ttagcatctt cggccagatc aaaattggac ttgaagttag gtgtcaggcc 5580

caggctcagg gcgatgaggt tcccaaacag gccgttcttc ttttctcctg gcagttgggc 5640caggctcagg gcgatgaggt tcccaaacag gccgttcttc ttttctcctg gcagttgggc 5640

aatcagattc tccagtctgc gtgacttgga cagccgagcg gacagaatag ccttggcatc 5700aatcagattc tccagtctgc gtgacttgga cagccgagcg gacagaatag ccttggcatc 5700

cacaccagaa gcgtttatgg gattctcctc gaacagttgg ttatatgtct gcaccagttg 5760cacaccagaa gcgtttatgg gattctcctc gaacagttgg ttatatgtct gcaccagttg 5760

aatgaagagt ttatccacat cggaattatc gggattcagg tcgccctcga tcagaaagtg 5820aatgaagagt ttatccacat cggaattatc gggattcagg tcgccctcga tcagaaagtg 5820

tcctctaaac tttatcatat gagccagggc cagatagatg agcctcaggt ctgctttatc 5880tcctctaaac tttatcatat gagccagggc cagatagatg agcctcaggt ctgctttatc 5880

ggtgctgtcc accagcttct tcctcagatg gtagattgta ggatactttt catggtaagc 5940ggtgctgtcc accagcttct tcctcagatg gtagattgta ggatactttt catggtaagc 5940

cacctcatcc acgatatttc cgaatatagg gtgcctctcg tgtttcttat cctcctccac 6000cacctcatcc acgatatttc cgaatatagg gtgcctctcg tgtttcttat cctcctccac 6000

cagaaagctc tcttccaggc ggtgaaagaa ggagtcgtcc accttagcca tttcgttgct 6060cagaaagctc tcttccaggc ggtgaaagaa ggagtcgtcc accttagcca tttcgttgct 6060

aaagatctct tgcagataac atatccgatt cttgcggcgg gtgtatctcc gccttgcggt 6120aaagatctct tgcagataac atatccgatt cttgcggcgg gtgtatctcc gccttgcggt 6120

ccgcttcagc cgagtagctt cagcggtttc accggagtcg aagaggagtg ctccgatcag 6180ccgcttcagc cgagtagctt cagcggtttc accggagtcg aagaggagtg ctccgatcag 6180

gttcttcttg attgaatggc ggtcagtatt acccagcacc ttgaatttct tgcttggcac 6240gttcttcttg attgaatggc ggtcagtatt acccagcacc ttgaatttct tgcttggcac 6240

cttatactcg tcggttatga cggcccagcc aacggagttt gtcccgatat ccagtccaat 6300cttatactcg tcggttatga cggcccagcc aacggagttt gtcccgatat ccagtccaat 6300

agagtatttc ttgtctctag tgtgggtccg ctggtgtctg gtcagagcac cagactgaga 6360agagtatttc ttgtctctag tgtgggtccg ctggtgtctg gtcagagcac cagactgaga 6360

gaaagattta ccacactctg ggcatttgta tggcttctcg ccgggttcca gtctagattt 6420gaaagattta ccacactctg ggcatttgta tggcttctcg ccgggttcca gtctagattt 6420

atcgtcgtca tccttgtagt cagcggccgc caccttcctc tttttcttag gtcccatggt 6480atcgtcgtca tccttgtagt cagcggccgc caccttcctc tttttcttag gtcccatggt 6480

gctagccagc ttgggtctcc ctatagtgag tcgtattaat ttcgataagc cagtaagcag 6540gctagccagc ttgggtctcc ctatagtgag tcgtattaat ttcgataagc cagtaagcag 6540

tgggttctct agttagccag agagctctgc ttatatagac ctcccaccgt acacgcctac 6600tgggttctct agttagccag agagctctgc ttatatagac ctcccaccgt acacgcctac 6600

cgcccatttg cgtcaatggg gcggagttgt tacgacattt tggaaagtcc cgttgatttt 6660cgcccatttg cgtcaatggg gcggagttgt tacgacattt tggaaagtcc cgttgatttt 6660

ggtgccaaaa caaactccca ttgacgtcaa tggggtggag acttggaaat ccccgtgagt 6720ggtgccaaaa caaactccca ttgacgtcaa tggggtggag acttggaaat ccccgtgagt 6720

caaaccgcta tccacgccca ttgatgtact gccaaaaccg catcaccatg gtaatagcga 6780caaaccgcta tccacgccca ttgatgtact gccaaaaccg catcaccatg gtaatagcga 6780

tgactaatac gtagatgtac tgccaagtag gaaagtccca taaggtcatg tactgggcat 6840tgactaatac gtagatgtac tgccaagtag gaaagtccca taaggtcatg tactgggcat 6840

aatgccaggc gggccattta ccgtcattga cgtcaatagg gggcgtactt ggcatatgat 6900aatgccaggc gggccattta ccgtcattga cgtcaatagg gggcgtactt ggcatatgat 6900

acacttgatg tactgccaag tgggcagttt accgtaaata ctccacccat tgacgtcaat 6960acacttgatg tactgccaag tgggcagttt accgtaaata ctccacccat tgacgtcaat 6960

ggaaagtccc tattggcgtt actatgggaa catacgtcat tattgacgtc aatgggcggg 7020ggaaagtccc tattggcgtt actatgggaa catacgtcat tattgacgtc aatgggcggg 7020

ggtcgttggg cggtcagcca ggcgggccat ttaccgtaag ttatgtaacg cggaactcca 7080ggtcgttggg cggtcagcca ggcgggccat ttaccgtaag ttatgtaacg cggaactcca 7080

tatatgggct atgaactaat gaccccgtaa ttgattacta ttaataacta gtcaataatc 7140tatatgggct atgaactaat gaccccgtaa ttgattacta ttaataacta gtcaataatc 7140

aatgtcaacg cgtatatctg gcccgtacat cgcgaagcag cgcaaaacgc ctaaccctaa 7200aatgtcaacg cgtatatctg gcccgtacat cgcgaagcag cgcaaaacgc ctaaccctaa 7200

gcagattctt catgcaattg tcggtcaagc cttgccttgt tgtagcttaa attttgctcg 7260gcagattctt catgcaattg tcggtcaagc cttgccttgt tgtagcttaa attttgctcg 7260

cgcactactc agcgacctcc aacacacaag cagggagcag atactggctt aactatgcgg 7320cgcactactc agcgacctcc aacacacaag cagggagcag atactggctt aactatgcgg 7320

catcagagca gattgtactg agagtgcacc ataggggatc gggagatctc ccgatccgtc 7380catcagagca gattgtactg agagtgcacc ataggggatc gggagatctc ccgatccgtc 7380

gacgtcaggt ggcacttttc ggggaaatgt gcgcggaacc cctatttgtt tatttttcta 7440gacgtcaggt ggcacttttc ggggaaatgt gcgcggaacc cctatttgtt tatttttcta 7440

aatacattca aatatgtatc cgctcatgag acaataaccc tgataaatgc ttcaataata 7500aatacattca aatatgtatc cgctcatgag acaataaccc tgataaatgc ttcaataata 7500

ttgaaaaagg aagagtatga gtattcaaca tttccgtgtc gcccttattc ccttttttgc 7560ttgaaaaagg aagagtatga gtattcaaca tttccgtgtc gcccttattc ccttttttgc 7560

ggcattttgc cttcctgttt ttgctcaccc agaaacgctg gtgaaagtaa aagatgctga 7620ggcattttgc cttcctgttt ttgctcaccc agaaacgctg gtgaaagtaa aagatgctga 7620

agatcagttg ggtgcacgag tgggttacat cgaactggat ctcaacagcg gtaagatcct 7680agatcagttg ggtgcacgag tgggttacat cgaactggat ctcaacagcg gtaagatcct 7680

tgagagtttt cgccccgaag aacgttttcc aatgatgagc acttttaaag ttctgctatg 7740tgagagtttt cgccccgaag aacgttttcc aatgatgagc acttttaaag ttctgctatg 7740

tggcgcggta ttatcccgta ttgacgccgg gcaagagcaa ctcggtcgcc gcatacacta 7800tggcgcggta ttatcccgta ttgacgccgg gcaagagcaa ctcggtcgcc gcatacacta 7800

ttctcagaat gacttggttg agtactcacc agtcacagaa aagcatctta cggatggcat 7860ttctcagaat gacttggttg agtactcacc agtcacagaa aagcatctta cggatggcat 7860

gacagtaaga gaattatgca gtgctgccat aaccatgagt gataacactg cggccaactt 7920gacagtaaga gaattatgca gtgctgccat aaccatgagt gataacactg cggccaactt 7920

acttctgaca acgatcggag gaccgaagga gctaaccgct tttttgcaca acatggggga 7980acttctgaca acgatcggag gaccgaagga gctaaccgct tttttgcaca acatggggga 7980

tcatgtaact cgccttgatc gttgggaacc ggagctgaat gaagccatac caaacgacga 8040tcatgtaact cgccttgatc gttgggaacc ggagctgaat gaagccatac caaacgacga 8040

gcgtgacacc acgatgcctg tagcaatggc aacaacgttg cgcaaactat taactggcga 8100gcgtgacacc acgatgcctg tagcaatggc aacaacgttg cgcaaactat taactggcga 8100

actacttact ctagcttccc ggcaacaatt aatagactgg atggaggcgg ataaagttgc 8160actacttact ctagcttccc ggcaacaatt aatagactgg atggaggcgg ataaagttgc 8160

aggaccactt ctgcgctcgg cccttccggc tggctggttt attgctgata aatctggagc 8220aggaccactt ctgcgctcgg cccttccggc tggctggttt attgctgata aatctggagc 8220

cggtgagcgt gggtctcgcg gtatcattgc agcactgggg ccagatggta agccctcccg 8280cggtgagcgt gggtctcgcg gtatcattgc agcactgggg ccagatggta agccctcccg 8280

tatcgtagtt atctacacga cggggagtca ggcaactatg gatgaacgaa atagacagat 8340tatcgtagtt atctacacga cggggagtca ggcaactatg gatgaacgaa atagacagat 8340

cgctgagata ggtgcctcac tgattaagca ttggtaactg tcagaccaag tttactcata 8400cgctgagata ggtgcctcac tgattaagca ttggtaactg tcagaccaag tttactcata 8400

tatactttag attgatttaa aacttcattt ttaatttaaa aggatctagg tgaagatcct 8460tatactttag attgatttaa aacttcattt ttaatttaaa aggatctagg tgaagatcct 8460

ttttgataat ctcatgacca aaatccctta acgtgagttt tcgttccact gagcgtcaga 8520ttttgataat ctcatgacca aaatccctta acgtgagttt tcgttccact gagcgtcaga 8520

ccccgtagaa aagatcaaag gatcttcttg agatcctttt tttctgcgcg taatctgctg 8580ccccgtagaa aagatcaaag gatcttcttg agatcctttt tttctgcgcg taatctgctg 8580

cttgcaaaca aaaaaaccac cgctaccagc ggtggtttgt ttgccggatc aagagctacc 8640cttgcaaaca aaaaaaccac cgctaccagc ggtggtttgt ttgccggatc aagagctacc 8640

aactcttttt ccgaaggtaa ctggcttcag cagagcgcag ataccaaata ctgttcttct 8700aactcttttt ccgaaggtaa ctggcttcag cagagcgcag ataccaaata ctgttcttct 8700

agtgtagccg tagttaggcc accacttcaa gaactctgta gcaccgccta catacctcgc 8760agtgtagccg tagttaggcc accacttcaa gaactctgta gcaccgccta catacctcgc 8760

tctgctaatc ctgttaccag tggctgctgc cagtggcgat aagtcgtgtc ttaccgggtt 8820tctgctaatc ctgttaccag tggctgctgc cagtggcgat aagtcgtgtc ttaccgggtt 8820

ggactcaaga cgatagttac cggataaggc gcagcggtcg ggctgaacgg ggggttcgtg 8880ggactcaaga cgatagttac cggataaggc gcagcggtcg ggctgaacgg ggggttcgtg 8880

cacacagccc agcttggagc gaacgaccta caccgaactg agatacctac agcgtgagct 8940cacacagccc agcttggagc gaacgaccta caccgaactg agatacctac agcgtgagct 8940

atgagaaagc gccacgcttc ccgaagggag aaaggcggac aggtatccgg taagcggcag 9000atgagaaagc gccacgcttc ccgaagggag aaaggcggac aggtatccgg taagcggcag 9000

ggtcggaaca ggagagcgca cgagggagct tccaggggga aacgcctggt atctttatag 9060ggtcggaaca ggagagcgca cgagggagct tccaggggga aacgcctggt atctttatag 9060

tcctgtcggg tttcgccacc tctgacttga gcgtcgattt ttgtgatgct cgtcaggggg 9120tcctgtcggg tttcgccacc tctgacttga gcgtcgattt ttgtgatgct cgtcaggggg 9120

gcggagccta tggaaaaacg ccagcaacgc ggccttttta cggttcctgg ccttttgctg 9180gcggagccta tggaaaaacg ccagcaacgc ggccttttta cggttcctgg ccttttgctg 9180

gccttttgct cacatgttct ttcctgcgtt atcccctgat tctgtggata accgtattac 9240gccttttgct cacatgttct ttcctgcgtt atcccctgat tctgtggata accgtattac 9240

cgcctttgag tgagctgata ccgctcgccg cagccgaacg accgagcgca gcgagtcagt 9300cgcctttgag tgagctgata ccgctcgccg cagccgaacg accgagcgca gcgagtcagt 9300

gagcgaggaa gcggaag 9317gagcgaggaa gcggaag 9317

<210> 8<210> 8

<211> 22<211> 22

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 8<400> 8

aagaccacca ctgcatcgaa ct 22aagaccacca ctgcatcgaa ct 22

<210> 9<210> 9

<211> 22<211> 22

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 9<400> 9

caggctgcta ggaaggacac tc 22caggctgcta ggaaggacac tc 22

<210> 10<210> 10

<211> 17<211> 17

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 10<400> 10

gtaaaacgac ggccagt 17gtaaaacgac ggccagt 17

<210> 11<210> 11

<211> 17<211> 17

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 11<400> 11

caggaaacag ctatgac 17caggaaacag ctatgac 17

<210> 12<210> 12

<211> 22<211> 22

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 12<400> 12

gagaccctaa ctggagacca ag 22gagaccctaa ctggagacca ag 22

<210> 13<210> 13

<211> 22<211> 22

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 13<400> 13

ctggaataca ggcaggtaaa tc 22ctggaataca ggcaggtaaa tc 22

<210> 14<210> 14

<211> 24<211> 24

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 14<400> 14

accgtgtttg gacaacgccc gtat 24accgtgtttg gacaacgccc gtat 24

<210> 15<210> 15

<211> 24<211> 24

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 15<400> 15

aaacatacgg gcgttgtcca aaca 24aaacatacgg gcgttgtcca aaca 24

<210> 16<210> 16

<211> 24<211> 24

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 16<400> 16

accgtgtcca ggacccacca atac 24accgtgtcca ggacccacca atac 24

<210> 17<210> 17

<211> 24<211> 24

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 17<400> 17

aaacgtattg gtgggtcctg gaca 24aaacgtattg gtgggtcctg gaca 24

<210> 18<210> 18

<211> 24<211> 24

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 18<400> 18

accgagctga acgtctgtct gtcc 24accgagctga acgtctgtct gtcc 24

<210> 19<210> 19

<211> 24<211> 24

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 19<400> 19

aaacggacag acagacgttc agct 24aaacggacag acagacgttc agct 24

<210> 20<210> 20

<211> 24<211> 24

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 20<400> 20

accggtgagc agcaaggtag atcc 24accggtgagc agcaaggtag atcc 24

<210> 21<210> 21

<211> 24<211> 24

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 21<400> 21

aaacggatct accttgctgc tcac 24aaacggatct accttgctgc tcac 24

<210> 22<210> 22

<211> 43<211> 43

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 22<400> 22

ttggacaacg cccgtattgg tgggtcctgg acaccgacta cta 43ttggacaacg cccgtattgg tgggtcctgg acaccgacta cta 43

<210> 23<210> 23

<211> 44<211> 44

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 23<400> 23

ttggacaacg cccgtattag gtgggtcctg gacaccgact acta 44ttggacaacg cccgtattag gtgggtcctg gacaccgact acta 44

<210> 24<210> 24

<211> 40<211> 40

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 24<400> 24

ttggacaacg cccgtagtgg gtcctggaca ccgactacta 40ttggacaacg cccgtagtgg gtcctggaca ccgactacta 40

<210> 25<210> 25

<211> 42<211> 42

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 25<400> 25

ttggacaacg cccgtttggt gggtcctgga caccgactac ta 42ttggacaacg cccgtttggt gggtcctgga caccgactac ta 42

<210> 26<210> 26

<211> 57<211> 57

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 26<400> 26

ttggacaacg cccgtattgg tgggtacccc accctacccc ccacccacag ttacaag 57ttggacaacg cccgtattgg tgggtacccc accctacccc ccacccacag ttacaag 57

<210> 27<210> 27

<211> 57<211> 57

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 27<400> 27

ttggacaacg cccgtattgg tgggtacccc accctacccc ccatgttgcc ttttaag 57ttggacaacg cccgtattgg tgggtacccc accctacccc ccatgttgcc ttttaag 57

<210> 28<210> 28

<211> 44<211> 44

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 28<400> 28

ttggacaacg cccggtattg gtgggtcctg gacaccgact acta 44ttggacaacg cccggtattg gtgggtcctg gacaccgact acta 44

<210> 29<210> 29

<211> 36<211> 36

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 29<400> 29

ttggacaacg cccgtagtcc tggacaccga ctacta 36ttggacaacg cccgtagtcc tggacaccga cacta 36

<210> 30<210> 30

<211> 41<211> 41

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 30<400> 30

ttggacaacg cccgtatgtg ggtcctggac accgactact a 41ttggacaacg cccgtatgtg ggtcctggac accgactact a 41

<210> 31<210> 31

<211> 44<211> 44

<212> DNA<212> DNA

<213> 人工序列(Artificial Sequence)<213> Artificial Sequence

<400> 31<400> 31

ttggacaacg cccgtatttg gtgggtcctg gacaccgact acta 44ttggacaacg cccgtatttg gtgggtcctg gacaccgact acta 44

Claims (10)

1. A sgRNA guide sequence of a specific targeting mouse G6pc gene is characterized in that the nucleotide sequence corresponding to the sgRNA is a sequence shown in SEQ ID NO. 2.
2. A method for editing a mouse G6pc gene using the sgRNA targeting sequence specifically targeting the mouse G6pc gene of claim 1, comprising the steps of:
step 1: synthesizing a forward oligonucleotide sequence by adding accg to the 5' end of the sgRNA guide sequence of the specific targeting mouse G6pc gene of claim 1;
meanwhile, according to the sgRNA guide sequence of the specific targeting mouse G6pc gene of claim 1, obtaining the corresponding DNA complementary strand, and adding aaac at the 5' end of the DNA complementary strand to synthesize a reverse oligonucleotide sequence;
annealing the forward oligonucleotide sequence and the reverse oligonucleotide sequence to form a double-stranded DNA fragment having a sticky end;
step 2: digesting a target vector pGL3-U6-sgRNA plasmid shown in SEQ ID NO.5 by using Bsa I restriction endonuclease to obtain a digestion product pGL3-U6-sgRNA-Bsa I;
and step 3: connecting the double-stranded DNA fragment with the sticky end obtained in the step 1 with the enzyme digestion product pGL3-U6-sgRNA-Bsa I obtained in the step 2, converting the connection product into competent escherichia coli, coating the competent escherichia coli on an ampicillin-resistant LB culture medium, culturing overnight at 37 ℃ for 20h, selecting a single clone, identifying a positive clone by sequencing with a universal primer U6 shown in SEQ ID No.6, shaking the positive clone, and extracting a plasmid to obtain pGL3-U6-G6pc-sgRNA plasmid;
and 4, step 4: co-transfecting mouse N2a cells with the pGL3-U6-G6pc-sgRNA plasmid obtained in the step 3 and the pST1374-NLS-flag-linker-Cas9 expression plasmid shown in SEQ ID NO.7, and obtaining positive sgRNA-Cas9 co-transfected cells after drug screening;
and 5: carrying out cell lysis on the positive sgRNA-Cas9 cotransfected cells obtained in the step (4), carrying out PCR amplification reaction on the DNA of the targeting site by taking the obtained cell lysis solution as a template, taking the PCR amplification product of the DNA of the targeting site to carry out Sanger sequencing, and if the targeting site has a set peak, primarily confirming that gene editing occurs;
step 6: TA cloning, sequencing and analyzing step 5 preliminarily confirms the genotype of the targeted site with gene editing and obtains mouse cells with the gene editing.
3. The method for editing mouse G6pc gene according to claim 2, wherein in step 1, the annealing reaction system is specifically: 10 μ M forward oligonucleotide, 5 μ L; 10 μ M reverse oligonucleotide, 5 μ L; 10 XT 7 EndonucleaaseI buffer, 2. mu.L; ddH2O, 8 mu L; the reaction procedure is specifically as follows: 95 ℃ for 5 min; 95 ℃ to 85 ℃, and-1 ℃/cycle, for 10 cycles; 85 ℃ to 25 ℃ and-0.1600 cycles of annealing, and storing the annealing product at-20 ℃.
4. The method for editing mouse G6pc gene according to claim 2, wherein in step 2, the enzymatic digestion reaction system specifically comprises: pGL3-U6-sgRNA plasmid, 2. mu.g; 10 Xenzyme digestion buffer, 2 uL; bsa I restriction enzyme, 2. mu.L; supplemental ddH2And O, setting the enzyme digestion reaction system at 37 ℃ for reaction for 3h until the total volume is 20 mu L.
5. The method for editing mouse G6pc gene according to claim 2, wherein the specific method for transforming competent Escherichia coli in step 3 is: adding 5 μ L of the ligation product into 30 μ L of competent Escherichia coli, mixing, standing on ice for 25min, performing water bath heat shock at 42 deg.C for 90s, cooling on ice for 2min, adding 150 μ L of LB liquid culture medium, rotating at 220 rpm, activating at 37 deg.C for 30min, and coating on the surface of LB solid culture medium with ampicillin resistance; in the LB culture medium containing ampicillin resistance, the concentration of ampicillin is 50 mug/mL; culturing overnight at 37 deg.C and 220 rpm; the extraction plasmid adopts a kit for extracting endotoxin-removing plasmid.
6. The method for editing mouse G6pc gene according to claim 2, wherein in step 4, the drugs are puromycin at a concentration of 50 μ G/ml and blasticidin at a concentration of 100 μ G/ml; the mouse N2a cells were inoculated and cultured in DMEM complete medium containing 10% v/v fetal calf serum at 37 ℃ and 5% CO before transfection2Culturing in an incubator, replacing fresh culture medium every 2d-3d, digesting with 0.25% trypsin after the cell confluence reaches 80-90%, then passing through a 6-well plate, and transfecting after 18-20 h and when the cell confluence reaches 60-70%.
7. The method for editing mouse G6pc gene according to claim 2, wherein in step 5, the PCR amplification reaction system of the target site DNA comprises: 2 mu L of cell lysate, 1 mu L of upstream primer, 1 mu L of downstream primer, 2 mu L of dNTP mix, 1 mu L of TaKaRa Ex Taq, 2.5 mu L of 10 XEx Taq Buffer and 25 mu L of sterilized water; the PCR amplification reaction of the target site DNA is carried out by the following procedures: 95 ℃ for 5 min; 95 ℃, 20s, 72 ℃, 20s, -1 ℃/cycle, 72 ℃, 25s, for 10 cycles; 25 cycles of 95 ℃, 20s, 62 ℃, 20s, 72 ℃, 25 s; 72 ℃, 5min, 16 ℃, infinity.
8. The method for editing mouse G6pc gene according to claim 7, wherein the sequence of the upstream primer is shown in SEQ ID No. 8; the sequence of the downstream primer is shown as SEQ ID NO. 9.
9. The method for editing mouse G6pc gene according to claim 2, wherein in step 6, the TA clone sequencing specifically comprises: performing gel recovery and purification on the PCR amplification product of the targeted site obtained in the step 5, connecting the purified DNA, and then performing metal bath at 16 ℃ for 1h to obtain a connection product; and transforming the ligation product into competent escherichia coli, coating the competent escherichia coli on an ampicillin-resistant LB solid culture medium, performing overnight culture at 37 ℃ for 20h, performing colony PCR reaction verification, screening out positive clones, and performing Sanger sequencing on the positive clones.
10. The method for editing mouse G6pc gene according to claim 9, wherein the linked reaction system is: PCR purified product 40ng, Solution I2.5. mu.L and PMD19 carrier 0.5. mu.L, and water is added to make up to 5. mu.L; the specific method for transforming the competent escherichia coli comprises the following steps: adding 5 μ L of the ligation product into 30 μ L of competent Escherichia coli, mixing, standing on ice for 25min, performing water bath heat shock at 42 deg.C for 90s, cooling on ice for 2min, adding 150 μ L of LB liquid culture medium at 220 rpm and 37 deg.C for 30min, and coating on the surface of LB liquid culture medium containing ampicillin resistance; in the LB culture medium containing ampicillin resistance, the concentration of ampicillin is 50 mug/mL; the colony PCR reaction system comprises: 1 mu L of colony aqueous solution, 5 mu L of Premix Taq enzyme, 0.5 mu L of upstream primer, 0.5 mu L of downstream primer and 3 mu L of sterilized water; the procedure of the colony PCR reaction was: 95 ℃ for 5 min; 95 ℃, 20s, 60 ℃, 20s, 72 ℃, 25s, 26 cycles; 72 ℃ for 5 min; the sequence of the upstream primer is shown as SEQ ID NO. 10; the sequence of the downstream primer is shown as SEQ ID NO. 11.
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