Detailed Description
The present invention will be further described with reference to the accompanying drawings and specific embodiments, which are illustrative of preferred embodiments of the invention and not limiting thereof, and which are capable of modifications in various equivalent embodiments, which will become apparent to those skilled in the art upon reading the foregoing disclosure. Any simple modification or equivalent changes made to the following embodiments according to the technical essence of the present invention, without departing from the technical spirit of the present invention, fall within the scope of the present invention.
Example 1 mutation of chitinase SsChi18A and construction of recombinant vectors
(1) Obtaining chitinase SsChi18A gene from NCBI database, connecting SChi18A gene with plasmid pET28a to obtain pET28 a-SChi 18A plasmid, wherein the nucleotide sequence of pET28 a-SChi 18A plasmid is shown as SEQ ID No. 3. Designing mutation primers by taking the recombinant plasmids as templates, and carrying out site-directed mutation, wherein the primer sequences are as follows:
K186A-sense:TCGGACGGAGGCGCACTCGACGCGG;
K186A-antisense:GAGTGCGCCTCCGTCCGAGGCGTCC;
the PCR amplification reaction system is as follows:
the reaction procedure was as follows:
preheating at 94 deg.C for 5 min; denaturation, at 94 ℃ for 30 s; annealing at 55-65 ℃ for 30 s; 30 cycles; extension, at 72 ℃ for 2 min; re-extension at 72 deg.C for 10 min; 4 ℃ and forever.
(2) 3 μ L of the PCR product was verified by agarose gel electrophoresis, leaving a reaction product with a clear band. The wild-type plasmid in the product was digested with DpnI restriction enzyme to ensure that all transformants were mutated in the next step. The digestion system is as shown in the following table, the system is fully mixed and reacts in water bath at 37 ℃ for 15 min;
(3) purifying the digested PCR product, wherein the experimental steps refer to GV-High-Efficiency DNA Fragments Purification Kit of Changsheng biotechnology Limited liability company of Beijing ancient cooking;
(4) transformation of E.coli DH 5. alpha. competent cells with the mutant plasmid:
add 10. mu.L of the purified above mutant plasmid into 50. mu.L of E.coli DH 5. alpha. competent cells, ice-bath for 30 min; carrying out heat shock for 90s at 42 ℃; ice-bath for 2min, adding 1mL liquid LB, and culturing in a shaker at 37 deg.C for 1-1.5 h; centrifuge at 8000rpm for 2min, discard the supernatant (leave a little bottom liquid). The remaining solution was spread on LB plate containing 50. mu.g/mL kanamycin and cultured by inversion overnight at 37 ℃; the next day, a single clone was picked, inoculated into 5mL of LB medium containing 50. mu.g/mL kanamycin, and cultured overnight at 37 ℃ at 200 rpm;
(5) extracting plasmids, wherein the experimental steps refer to GV-Plasmid DNA Mini Extraction Kit of Changsheng biotechnology Limited company of Beijing ancient cooking;
(6) taking 3 mu L of plasmid to carry out 1% agarose gel electrophoresis detection, and leaving the plasmid with clear bands;
(7) 10 μ L of plasmid solution was sequenced in sterile EP tubes. And comparing the sequencing result with the original sequence to confirm whether the site-directed mutagenesis is successful. The plasmid with the correct sequencing is a recombinant vector pET28a-SsChi18A-K186A of a mutant gene SsChi18A _1 containing chitinase SChi18A, and the nucleotide sequence of the plasmid is shown as SEQ ID No. 4.
Example 2 construction of recombinant engineered bacterium containing the mutant Gene SsChi18A _1
In the embodiment, the recombinant engineering bacteria containing the mutant gene SsChi18A _1 are constructed, and the specific steps are as follows: adding 2 μ L of the above mutation plasmid pET28a-SsChi18A-K186A with correct sequencing into 50 μ L of Escherichia coli BL-21 competent cells, and ice-cooling for 30 min; carrying out heat shock for 90s at 42 ℃; ice-bath for 2min, adding 1mL liquid LB, and culturing in a shaker at 37 deg.C for 1-1.5 h; centrifuge at 8000rpm for 2min, discard the supernatant (leave a little bottom liquid). The remaining solution was spread on LB plate containing 50. mu.g/mL kanamycin, spread evenly to dryness, and cultured by inversion overnight at 37 ℃; the next day, the single clone is selected and inoculated in 5mL LB culture medium containing antibiotics, and cultured overnight at 37 ℃ and 200rpm, and the recombinant engineering bacterium containing the mutant gene SsChi18A _1 is obtained.
Example 3: recombinant expression of mutant Gene SsChi18A _1
Fermenting, expressing and purifying the mutant chitinase SsChi18A-K186A encoded by the mutant gene SChi18A _1, and specifically comprising the following steps:
(1) heterologous expression of recombinant protein:
the recombinant engineering bacteria containing the mutant gene SsChi18A _1 obtained in example 2 are taken and cultured in 5mL LB culture medium (containing 50 ug/mL kanamycin) at the temperature of 37 ℃ and 200rpm overnight;
transferring the overnight-cultured bacterial liquid into a 1L triangular flask (containing 50 ug/mL kanamycin) filled with 300mL of LB medium, and culturing at 37 ℃ for about 3h until OD600 is 0.6-0.8; adding IPTG with final concentration of 0.5mM, and performing induced culture at 20 ℃ for 20 h; centrifuging at 8000rpm and 4 deg.C for 10min to obtain thallus precipitate;
with NaH at pH 8.02PO4Resuspending the bacteria in NaCl buffer solution, and placing the bacteria solution in a 100mL centrifuge tube; placing the centrifuge tube ON ice, ultrasonically breaking cells, setting the time to be 9s ON and 10s OFF for 90 times; centrifuging at 11000rpm at 4 ℃ for 30 min; the supernatant was filtered through a 0.22 μm filter head and the filtrate was combined with column packing and prepared for affinity purification.
(2) And (3) purifying the recombinant protein:
the target protein containing 6 XHis tag was affinity purified using a GE Healthcare Ni Sepharose 6Fast Flow affinity column. Mixing the crude enzyme solution obtained in the last step with a filler, and rotating and combining for 2h at 4 ℃ to ensure that nickel on the filler is fully combined with His labels on the proteins;
with NaH at pH 8.02PO4Preparing imidazole mother liquor with the concentration of 1M by NaCl buffer solution, then diluting to 5mM, 20mM, 60mM, 100mM and 250mM respectively, eluting protein by imidazole with the concentration, and collecting the protein into 10mL EP tubes respectively;
regenerating the nickel column after eluting the protein, and adding corresponding solutions into the nickel column according to the following sequence during regeneration: 50mM EDTA → distilled water → 1M NaCl → distilled water → 0.1M nickel sulfate → distilled water → 70% ethanol → 20% ethanol for storage;
the collected enzyme solution was subjected to SDS-PAGE: mixing the sample with SDS buffer at ratio of 4:1 (16 μ L sample, 4 μ L buffer), 10 μ L Marker, and treating at 105 deg.C for 10 min; when the sample is spotted, 12 mu L of sample spots and 5 mu L of Marker spots are spotted. Electrophoresis was performed with 80V and the voltage was adjusted to 180V when the protein sample was in a straight line. Dyeing with Coomassie brilliant blue R-250 dye solution for 30min after electrophoresis, decolorizing with decolorizing solution for about 2h, and scanning with scanner for observation;
finding out several tubes with purer target protein bands, adding NaH with pH of 5.02PO4-citric acid buffer, ultrafiltration at 4900rpm at 4 ℃ until the pH of the filtered buffer is 5.0;
the enzyme solution after ultrafiltration was filtered through a sterile 0.22 μm filter head into a sterilized 10mL centrifuge tube and stored at 4 ℃. If long-term storage is required, the temperature is kept at-80 ℃.
(3) Content determination of recombinant protein:
diluting the protein of interest to an appropriate concentration (measured without exceeding the range of the standard curve); the control group was added with 0.1mL of NaH at pH 5.02PO4Citrate buffer, 0.1mL of diluted solution of the protein of interest is added to the experimental group. Each tube was then mixed with 1mL of Coomassie brilliant blue staining solution and shaken well. Standing for 10min, and measuring OD 595; each group of three replicates was assayed three times for nine replicates; protein amount and protein concentration were calculated from the standard curve.
As shown in FIG. 1, SDS-PAGE showed that the band of mutant chitinase SsChi18A-K186A was a standard protein of about 45kDa, similar in size to that expected. The results show that the target protein SsChi18A-K186A is successfully obtained by the invention.
The amino acid sequence of SsChi18A-K186A is shown as SEQ ID No.2, and the coding gene sequence is shown as SEQ ID No. 1.
A recombinant vector pET28a-SsChi18A containing the wild-type gene SsChi18A, the nucleotide sequence of which is shown in SEQ ID No.3, was prepared in the same manner as described above, and expression and purification of the protein were carried out.
Example 4: comparison of the enzymatic Properties of the mutant chitinase SsChi18A-K186A with the wild-type enzyme SChi18A
(1) The mutant chitinase SsChi18A-K186A and the wild-type enzyme SChi18A have enzyme activities under optimal conditions:
diluting mutant chitinase SsChi18A-K186A and wild type enzyme SChi18A to 0.01 mu mol/mL; to a control tube was added 100. mu.L of NaH at pH 5.02PO4Citric acid buffer, 100. mu.L of diluted enzyme solution was added to the test group tubes, and 100. mu.L of colloidal chitin (dissolved in 50mM NaH at pH 5.0) was added to each tube2PO4-citric acid buffer), reacting at 60 ℃ for 10 min;
adding 300 μ L DNS into each tube, and boiling in water bath for 10 min; rapidly cooling, shaking, centrifuging, collecting supernatant, and determining OD 550; three replicates of each enzyme were run; calculating the reducing sugar amount according to a standard curve, and calculating the specific enzyme activity according to a formula; the enzyme activities of the two proteins were compared.
The optimal enzyme activities of mutant chitinase SsChi18A-K186A and wild-type chitinase SChi18A are shown in FIG. 2. The enzyme activity of the mutant xylanase SsChi18A-K186A is 1.55 times that of the wild xylanase SChi18A, which proves that the mutant chitinase has stronger enzyme activity on chitosan and has potential application value.
(2) Determination of oligosaccharide product profiles at 60 ℃ of mutant xylanase SsChi18A-K186A and wild-type enzyme SChi 18A:
diluting mutant chitinase SsChi18A-K186A and wild type enzyme SChi18A to 0.01 nmol/mL; the experimental tube was filled with 40. mu.L of diluted enzyme solution, and 60. mu.L of 1mg/mL chitin oligosaccharide solution (dissolved in 50mM Na pH 5.0)2HPO4-citric acid buffer), reacting for 30min at 60 ℃; sampling at 0, 2, 5, 10, 20 and 30 min;
detecting a product spectrum by adopting a method of FACE electrophoresis: firstly, a supersaturated 7-amino-1, 3-naphthalene disulfonate (ANDS) solution dissolved in 15% acetic acid is mixed with a sample in equal volume (5 mu L of each solution) and reacted for 1 hour in a dark place; an equal volume of NaCNBH was then added3Adding the solution into the mixture, and incubating overnight at 42 ℃; adding 15 mu L of 50% sucrose solution into the mixed solution; and the labeled product was used for electrophoresis at a ratio of 7. mu.L/well; the images were scanned using a ChemiDocTM MP imaging system and the image files were stored in TIFF format.
The spectrum of oligosaccharide products from mutant chitinase SsChi18A-K186A treated at different times with wild-type chitinase SChi18A at 60 ℃ is shown in FIG. 3. The mutant chitinase SsChi18A-K186A can finish the degradation of chitin pentasaccharide within 10min and finish the degradation of chitin hexasaccharide within 20 min; while the wild-type chitinase SsChi18A can not degrade the oligosaccharide within 30 min. The result proves that the mutant chitinase also has stronger enzyme activity on chitin oligosaccharide, and has potential industrial application value.
The above embodiments are merely illustrative of the technical ideas and features of the present invention, and the purpose thereof is to enable those skilled in the art to understand the contents of the present invention and implement the present invention, and not to limit the protection scope of the present invention. All equivalent changes and modifications made according to the spirit of the present invention should be covered within the protection scope of the present invention.
SEQUENCE LISTING
<110> Shandong university
<120> a mutant chitinase and use thereof
<130> 111
<160> 4
<170> PatentIn version 3.5
<210> 1
<211> 1098
<212> DNA
<213> Artificial Sequence
<220>
<223> mutant
<400> 1
ggttacttca ccgagtgggg cgtctacggc cgcgactacc acgtcaagaa cctggtgacc 60
tccggctcgg ccgccaagat cacccacatc aactacgggt tcggcaacgt caagaacggc 120
cagtgcgccg tcgacgacac cttcgccgcc tacgagaagg cctacaccgc cgaccagtcc 180
gtcagcggca ccgccgacac ctgggaccag ccgctgcgcg gcaacttcaa ccagctgcgc 240
cagctgaagg cgaagtaccc gcacatcaag gtgctgtact ccttcggcgg ctggacctac 300
tccggcggct tcgcccaggc cgcgcagaac ccggccgcgt tcgccaggtc ctgcaagcag 360
gtcgtggagg acccgcgctg ggcggatgtc ttcgacggca tcgacatcga ctgggagtac 420
ccgaacgcct gcggtctgac ctgcgactcc agcggcccgg cggccttcag gaacctcgtg 480
caggccctgc gcgccgagtt cggcgaggac tacctggtca ccgccgcgat caccgcggac 540
gcctcggacg gaggcgcact cgacgcggcc gactacggcg gcgccgccca gtacctcgac 600
tggtacaacg tgatgacgta cgactacttc ggcgcctggg acaggaccgg ccccaccgcc 660
ccccactcgc cgctgacctc ctacaacggc atcccgaagc agggcttcga ctcggcctcc 720
gccatcgcca agctcagggc caagggcgtt ccggcgcaca agctgctgct cggcatcggc 780
ttctacggcc gcggctggac cggcgtgacc cagtccgccc cgggcggcac cgccaccggt 840
ccggcgcccg gcacctacga ggcgggcgtc gaggactaca aggtcctgaa gaactcctgc 900
ccggccaccg gcaccatcgc cggcacggcc tacgcccact gcggcaccaa ctggtggtcc 960
tacgacaccc cggccaccat cggcaccaag atgaactggg tcaagtccca gggcctgggc 1020
ggtgccttct tctgggagtt cagcggcgac accagcaacg gtgagctggt cagcgccatc 1080
aacagcggcc tgtcgtaa 1098
<210> 2
<211> 365
<212> PRT
<213> Artificial Sequence
<220>
<223> mutant
<400> 2
Gly Tyr Phe Thr Glu Trp Gly Val Tyr Gly Arg Asp Tyr His Val Lys
1 5 10 15
Asn Leu Val Thr Ser Gly Ser Ala Ala Lys Ile Thr His Ile Asn Tyr
20 25 30
Gly Phe Gly Asn Val Lys Asn Gly Gln Cys Ala Val Asp Asp Thr Phe
35 40 45
Ala Ala Tyr Glu Lys Ala Tyr Thr Ala Asp Gln Ser Val Ser Gly Thr
50 55 60
Ala Asp Thr Trp Asp Gln Pro Leu Arg Gly Asn Phe Asn Gln Leu Arg
65 70 75 80
Gln Leu Lys Ala Lys Tyr Pro His Ile Lys Val Leu Tyr Ser Phe Gly
85 90 95
Gly Trp Thr Tyr Ser Gly Gly Phe Ala Gln Ala Ala Gln Asn Pro Ala
100 105 110
Ala Phe Ala Arg Ser Cys Lys Gln Val Val Glu Asp Pro Arg Trp Ala
115 120 125
Asp Val Phe Asp Gly Ile Asp Ile Asp Trp Glu Tyr Pro Asn Ala Cys
130 135 140
Gly Leu Thr Cys Asp Ser Ser Gly Pro Ala Ala Phe Arg Asn Leu Val
145 150 155 160
Gln Ala Leu Arg Ala Glu Phe Gly Glu Asp Tyr Leu Val Thr Ala Ala
165 170 175
Ile Thr Ala Asp Ala Ser Asp Gly Gly Ala Leu Asp Ala Ala Asp Tyr
180 185 190
Gly Gly Ala Ala Gln Tyr Leu Asp Trp Tyr Asn Val Met Thr Tyr Asp
195 200 205
Tyr Phe Gly Ala Trp Asp Arg Thr Gly Pro Thr Ala Pro His Ser Pro
210 215 220
Leu Thr Ser Tyr Asn Gly Ile Pro Lys Gln Gly Phe Asp Ser Ala Ser
225 230 235 240
Ala Ile Ala Lys Leu Arg Ala Lys Gly Val Pro Ala His Lys Leu Leu
245 250 255
Leu Gly Ile Gly Phe Tyr Gly Arg Gly Trp Thr Gly Val Thr Gln Ser
260 265 270
Ala Pro Gly Gly Thr Ala Thr Gly Pro Ala Pro Gly Thr Tyr Glu Ala
275 280 285
Gly Val Glu Asp Tyr Lys Val Leu Lys Asn Ser Cys Pro Ala Thr Gly
290 295 300
Thr Ile Ala Gly Thr Ala Tyr Ala His Cys Gly Thr Asn Trp Trp Ser
305 310 315 320
Tyr Asp Thr Pro Ala Thr Ile Gly Thr Lys Met Asn Trp Val Lys Ser
325 330 335
Gln Gly Leu Gly Gly Ala Phe Phe Trp Glu Phe Ser Gly Asp Thr Ser
340 345 350
Asn Gly Glu Leu Val Ser Ala Ile Asn Ser Gly Leu Ser
355 360 365
<210> 3
<211> 6428
<212> DNA
<213> Artificial Sequence
<220>
<223> mutant
<400> 3
atccggatat agttcctcct ttcagcaaaa aacccctcaa gacccgttta gaggccccaa 60
ggggttatgc tagttattgc tcagcggtgg cagcagccaa ctcagcttcc tttcgggctt 120
tgttagcagc cggatctcag tggtggtggt ggtggtgctc gagtgcggcc gcaagcttgt 180
cgacggagct cgaattctta cgacaggccg ctgttgatgg cgctgaccag ctcaccgttg 240
ctggtgtcgc cgctgaactc ccagaagaag gcaccgccca ggccctggga cttgacccag 300
ttcatcttgg tgccgatggt ggccggggtg tcgtaggacc accagttggt gccgcagtgg 360
gcgtaggccg tgccggcgat ggtgccggtg gccgggcagg agttcttcag gaccttgtag 420
tcctcgacgc ccgcctcgta ggtgccgggc gccggaccgg tggcggtgcc gcccggggcg 480
gactgggtca cgccggtcca gccgcggccg tagaagccga tgccgagcag cagcttgtgc 540
gccggaacgc ccttggccct gagcttggcg atggcggagg ccgagtcgaa gccctgcttc 600
gggatgccgt tgtaggaggt cagcggcgag tggggggcgg tggggccggt cctgtcccag 660
gcgccgaagt agtcgtacgt catcacgttg taccagtcga ggtactgggc ggcgccgccg 720
tagtcggccg cgtcgagctt gcctccgtcc gaggcgtccg cggtgatcgc ggcggtgacc 780
aggtagtcct cgccgaactc ggcgcgcagg gcctgcacga ggttcctgaa ggccgccggg 840
ccgctggagt cgcaggtcag accgcaggcg ttcgggtact cccagtcgat gtcgatgccg 900
tcgaagacat ccgcccagcg cgggtcctcc acgacctgct tgcaggacct ggcgaacgcg 960
gccgggttct gcgcggcctg ggcgaagccg ccggagtagg tccagccgcc gaaggagtac 1020
agcaccttga tgtgcgggta cttcgccttc agctggcgca gctggttgaa gttgccgcgc 1080
agcggctggt cccaggtgtc ggcggtgccg ctgacggact ggtcggcggt gtaggccttc 1140
tcgtaggcgg cgaaggtgtc gtcgacggcg cactggccgt tcttgacgtt gccgaacccg 1200
tagttgatgt gggtgatctt ggcggccgag ccggaggtca ccaggttctt gacgtggtag 1260
tcgcggccgt agacgcccca ctcggtgaag taacccatat ggctgccgcg cggcaccagg 1320
ccgctgctgt gatgatgatg atgatggctg ctgcccatgg tatatctcct tcttaaagtt 1380
aaacaaaatt atttctagag gggaattgtt atccgctcac aattccccta tagtgagtcg 1440
tattaatttc gcgggatcga gatctcgatc ctctacgccg gacgcatcgt ggccggcatc 1500
accggcgcca caggtgcggt tgctggcgcc tatatcgccg acatcaccga tggggaagat 1560
cgggctcgcc acttcgggct catgagcgct tgtttcggcg tgggtatggt ggcaggcccc 1620
gtggccgggg gactgttggg cgccatctcc ttgcatgcac cattccttgc ggcggcggtg 1680
ctcaacggcc tcaacctact actgggctgc ttcctaatgc aggagtcgca taagggagag 1740
cgtcgagatc ccggacacca tcgaatggcg caaaaccttt cgcggtatgg catgatagcg 1800
cccggaagag agtcaattca gggtggtgaa tgtgaaacca gtaacgttat acgatgtcgc 1860
agagtatgcc ggtgtctctt atcagaccgt ttcccgcgtg gtgaaccagg ccagccacgt 1920
ttctgcgaaa acgcgggaaa aagtggaagc ggcgatggcg gagctgaatt acattcccaa 1980
ccgcgtggca caacaactgg cgggcaaaca gtcgttgctg attggcgttg ccacctccag 2040
tctggccctg cacgcgccgt cgcaaattgt cgcggcgatt aaatctcgcg ccgatcaact 2100
gggtgccagc gtggtggtgt cgatggtaga acgaagcggc gtcgaagcct gtaaagcggc 2160
ggtgcacaat cttctcgcgc aacgcgtcag tgggctgatc attaactatc cgctggatga 2220
ccaggatgcc attgctgtgg aagctgcctg cactaatgtt ccggcgttat ttcttgatgt 2280
ctctgaccag acacccatca acagtattat tttctcccat gaagacggta cgcgactggg 2340
cgtggagcat ctggtcgcat tgggtcacca gcaaatcgcg ctgttagcgg gcccattaag 2400
ttctgtctcg gcgcgtctgc gtctggctgg ctggcataaa tatctcactc gcaatcaaat 2460
tcagccgata gcggaacggg aaggcgactg gagtgccatg tccggttttc aacaaaccat 2520
gcaaatgctg aatgagggca tcgttcccac tgcgatgctg gttgccaacg atcagatggc 2580
gctgggcgca atgcgcgcca ttaccgagtc cgggctgcgc gttggtgcgg atatctcggt 2640
agtgggatac gacgataccg aagacagctc atgttatatc ccgccgttaa ccaccatcaa 2700
acaggatttt cgcctgctgg ggcaaaccag cgtggaccgc ttgctgcaac tctctcaggg 2760
ccaggcggtg aagggcaatc agctgttgcc cgtctcactg gtgaaaagaa aaaccaccct 2820
ggcgcccaat acgcaaaccg cctctccccg cgcgttggcc gattcattaa tgcagctggc 2880
acgacaggtt tcccgactgg aaagcgggca gtgagcgcaa cgcaattaat gtaagttagc 2940
tcactcatta ggcaccggga tctcgaccga tgcccttgag agccttcaac ccagtcagct 3000
ccttccggtg ggcgcggggc atgactatcg tcgccgcact tatgactgtc ttctttatca 3060
tgcaactcgt aggacaggtg ccggcagcgc tctgggtcat tttcggcgag gaccgctttc 3120
gctggagcgc gacgatgatc ggcctgtcgc ttgcggtatt cggaatcttg cacgccctcg 3180
ctcaagcctt cgtcactggt cccgccacca aacgtttcgg cgagaagcag gccattatcg 3240
ccggcatggc ggccccacgg gtgcgcatga tcgtgctcct gtcgttgagg acccggctag 3300
gctggcgggg ttgccttact ggttagcaga atgaatcacc gatacgcgag cgaacgtgaa 3360
gcgactgctg ctgcaaaacg tctgcgacct gagcaacaac atgaatggtc ttcggtttcc 3420
gtgtttcgta aagtctggaa acgcggaagt cagcgccctg caccattatg ttccggatct 3480
gcatcgcagg atgctgctgg ctaccctgtg gaacacctac atctgtatta acgaagcgct 3540
ggcattgacc ctgagtgatt tttctctggt cccgccgcat ccataccgcc agttgtttac 3600
cctcacaacg ttccagtaac cgggcatgtt catcatcagt aacccgtatc gtgagcatcc 3660
tctctcgttt catcggtatc attaccccca tgaacagaaa tcccccttac acggaggcat 3720
cagtgaccaa acaggaaaaa accgccctta acatggcccg ctttatcaga agccagacat 3780
taacgcttct ggagaaactc aacgagctgg acgcggatga acaggcagac atctgtgaat 3840
cgcttcacga ccacgctgat gagctttacc gcagctgcct cgcgcgtttc ggtgatgacg 3900
gtgaaaacct ctgacacatg cagctcccgg agacggtcac agcttgtctg taagcggatg 3960
ccgggagcag acaagcccgt cagggcgcgt cagcgggtgt tggcgggtgt cggggcgcag 4020
ccatgaccca gtcacgtagc gatagcggag tgtatactgg cttaactatg cggcatcaga 4080
gcagattgta ctgagagtgc accatatatg cggtgtgaaa taccgcacag atgcgtaagg 4140
agaaaatacc gcatcaggcg ctcttccgct tcctcgctca ctgactcgct gcgctcggtc 4200
gttcggctgc ggcgagcggt atcagctcac tcaaaggcgg taatacggtt atccacagaa 4260
tcaggggata acgcaggaaa gaacatgtga gcaaaaggcc agcaaaaggc caggaaccgt 4320
aaaaaggccg cgttgctggc gtttttccat aggctccgcc cccctgacga gcatcacaaa 4380
aatcgacgct caagtcagag gtggcgaaac ccgacaggac tataaagata ccaggcgttt 4440
ccccctggaa gctccctcgt gcgctctcct gttccgaccc tgccgcttac cggatacctg 4500
tccgcctttc tcccttcggg aagcgtggcg ctttctcata gctcacgctg taggtatctc 4560
agttcggtgt aggtcgttcg ctccaagctg ggctgtgtgc acgaaccccc cgttcagccc 4620
gaccgctgcg ccttatccgg taactatcgt cttgagtcca acccggtaag acacgactta 4680
tcgccactgg cagcagccac tggtaacagg attagcagag cgaggtatgt aggcggtgct 4740
acagagttct tgaagtggtg gcctaactac ggctacacta gaaggacagt atttggtatc 4800
tgcgctctgc tgaagccagt taccttcgga aaaagagttg gtagctcttg atccggcaaa 4860
caaaccaccg ctggtagcgg tggttttttt gtttgcaagc agcagattac gcgcagaaaa 4920
aaaggatctc aagaagatcc tttgatcttt tctacggggt ctgacgctca gtggaacgaa 4980
aactcacgtt aagggatttt ggtcatgaac aataaaactg tctgcttaca taaacagtaa 5040
tacaaggggt gttatgagcc atattcaacg ggaaacgtct tgctctaggc cgcgattaaa 5100
ttccaacatg gatgctgatt tatatgggta taaatgggct cgcgataatg tcgggcaatc 5160
aggtgcgaca atctatcgat tgtatgggaa gcccgatgcg ccagagttgt ttctgaaaca 5220
tggcaaaggt agcgttgcca atgatgttac agatgagatg gtcagactaa actggctgac 5280
ggaatttatg cctcttccga ccatcaagca ttttatccgt actcctgatg atgcatggtt 5340
actcaccact gcgatccccg ggaaaacagc attccaggta ttagaagaat atcctgattc 5400
aggtgaaaat attgttgatg cgctggcagt gttcctgcgc cggttgcatt cgattcctgt 5460
ttgtaattgt ccttttaaca gcgatcgcgt atttcgtctc gctcaggcgc aatcacgaat 5520
gaataacggt ttggttgatg cgagtgattt tgatgacgag cgtaatggct ggcctgttga 5580
acaagtctgg aaagaaatgc ataaactttt gccattctca ccggattcag tcgtcactca 5640
tggtgatttc tcacttgata accttatttt tgacgagggg aaattaatag gttgtattga 5700
tgttggacga gtcggaatcg cagaccgata ccaggatctt gccatcctat ggaactgcct 5760
cggtgagttt tctccttcat tacagaaacg gctttttcaa aaatatggta ttgataatcc 5820
tgatatgaat aaattgcagt ttcatttgat gctcgatgag tttttctaag aattaattca 5880
tgagcggata catatttgaa tgtatttaga aaaataaaca aataggggtt ccgcgcacat 5940
ttccccgaaa agtgccacct gaaattgtaa acgttaatat tttgttaaaa ttcgcgttaa 6000
atttttgtta aatcagctca ttttttaacc aataggccga aatcggcaaa atcccttata 6060
aatcaaaaga atagaccgag atagggttga gtgttgttcc agtttggaac aagagtccac 6120
tattaaagaa cgtggactcc aacgtcaaag ggcgaaaaac cgtctatcag ggcgatggcc 6180
cactacgtga accatcaccc taatcaagtt ttttggggtc gaggtgccgt aaagcactaa 6240
atcggaaccc taaagggagc ccccgattta gagcttgacg gggaaagccg gcgaacgtgg 6300
cgagaaagga agggaagaaa gcgaaaggag cgggcgctag ggcgctggca agtgtagcgg 6360
tcacgctgcg cgtaaccacc acacccgccg cgcttaatgc gccgctacag ggcgcgtccc 6420
attcgcca 6428
<210> 4
<211> 6428
<212> DNA
<213> Artificial Sequence
<220>
<223> mutant
<400> 4
atccggatat agttcctcct ttcagcaaaa aacccctcaa gacccgttta gaggccccaa 60
ggggttatgc tagttattgc tcagcggtgg cagcagccaa ctcagcttcc tttcgggctt 120
tgttagcagc cggatctcag tggtggtggt ggtggtgctc gagtgcggcc gcaagcttgt 180
cgacggagct cgaattctta cgacaggccg ctgttgatgg cgctgaccag ctcaccgttg 240
ctggtgtcgc cgctgaactc ccagaagaag gcaccgccca ggccctggga cttgacccag 300
ttcatcttgg tgccgatggt ggccggggtg tcgtaggacc accagttggt gccgcagtgg 360
gcgtaggccg tgccggcgat ggtgccggtg gccgggcagg agttcttcag gaccttgtag 420
tcctcgacgc ccgcctcgta ggtgccgggc gccggaccgg tggcggtgcc gcccggggcg 480
gactgggtca cgccggtcca gccgcggccg tagaagccga tgccgagcag cagcttgtgc 540
gccggaacgc ccttggccct gagcttggcg atggcggagg ccgagtcgaa gccctgcttc 600
gggatgccgt tgtaggaggt cagcggcgag tggggggcgg tggggccggt cctgtcccag 660
gcgccgaagt agtcgtacgt catcacgttg taccagtcga ggtactgggc ggcgccgccg 720
tagtcggccg cgtcgagtgc gcctccgtcc gaggcgtccg cggtgatcgc ggcggtgacc 780
aggtagtcct cgccgaactc ggcgcgcagg gcctgcacga ggttcctgaa ggccgccggg 840
ccgctggagt cgcaggtcag accgcaggcg ttcgggtact cccagtcgat gtcgatgccg 900
tcgaagacat ccgcccagcg cgggtcctcc acgacctgct tgcaggacct ggcgaacgcg 960
gccgggttct gcgcggcctg ggcgaagccg ccggagtagg tccagccgcc gaaggagtac 1020
agcaccttga tgtgcgggta cttcgccttc agctggcgca gctggttgaa gttgccgcgc 1080
agcggctggt cccaggtgtc ggcggtgccg ctgacggact ggtcggcggt gtaggccttc 1140
tcgtaggcgg cgaaggtgtc gtcgacggcg cactggccgt tcttgacgtt gccgaacccg 1200
tagttgatgt gggtgatctt ggcggccgag ccggaggtca ccaggttctt gacgtggtag 1260
tcgcggccgt agacgcccca ctcggtgaag taacccatat ggctgccgcg cggcaccagg 1320
ccgctgctgt gatgatgatg atgatggctg ctgcccatgg tatatctcct tcttaaagtt 1380
aaacaaaatt atttctagag gggaattgtt atccgctcac aattccccta tagtgagtcg 1440
tattaatttc gcgggatcga gatctcgatc ctctacgccg gacgcatcgt ggccggcatc 1500
accggcgcca caggtgcggt tgctggcgcc tatatcgccg acatcaccga tggggaagat 1560
cgggctcgcc acttcgggct catgagcgct tgtttcggcg tgggtatggt ggcaggcccc 1620
gtggccgggg gactgttggg cgccatctcc ttgcatgcac cattccttgc ggcggcggtg 1680
ctcaacggcc tcaacctact actgggctgc ttcctaatgc aggagtcgca taagggagag 1740
cgtcgagatc ccggacacca tcgaatggcg caaaaccttt cgcggtatgg catgatagcg 1800
cccggaagag agtcaattca gggtggtgaa tgtgaaacca gtaacgttat acgatgtcgc 1860
agagtatgcc ggtgtctctt atcagaccgt ttcccgcgtg gtgaaccagg ccagccacgt 1920
ttctgcgaaa acgcgggaaa aagtggaagc ggcgatggcg gagctgaatt acattcccaa 1980
ccgcgtggca caacaactgg cgggcaaaca gtcgttgctg attggcgttg ccacctccag 2040
tctggccctg cacgcgccgt cgcaaattgt cgcggcgatt aaatctcgcg ccgatcaact 2100
gggtgccagc gtggtggtgt cgatggtaga acgaagcggc gtcgaagcct gtaaagcggc 2160
ggtgcacaat cttctcgcgc aacgcgtcag tgggctgatc attaactatc cgctggatga 2220
ccaggatgcc attgctgtgg aagctgcctg cactaatgtt ccggcgttat ttcttgatgt 2280
ctctgaccag acacccatca acagtattat tttctcccat gaagacggta cgcgactggg 2340
cgtggagcat ctggtcgcat tgggtcacca gcaaatcgcg ctgttagcgg gcccattaag 2400
ttctgtctcg gcgcgtctgc gtctggctgg ctggcataaa tatctcactc gcaatcaaat 2460
tcagccgata gcggaacggg aaggcgactg gagtgccatg tccggttttc aacaaaccat 2520
gcaaatgctg aatgagggca tcgttcccac tgcgatgctg gttgccaacg atcagatggc 2580
gctgggcgca atgcgcgcca ttaccgagtc cgggctgcgc gttggtgcgg atatctcggt 2640
agtgggatac gacgataccg aagacagctc atgttatatc ccgccgttaa ccaccatcaa 2700
acaggatttt cgcctgctgg ggcaaaccag cgtggaccgc ttgctgcaac tctctcaggg 2760
ccaggcggtg aagggcaatc agctgttgcc cgtctcactg gtgaaaagaa aaaccaccct 2820
ggcgcccaat acgcaaaccg cctctccccg cgcgttggcc gattcattaa tgcagctggc 2880
acgacaggtt tcccgactgg aaagcgggca gtgagcgcaa cgcaattaat gtaagttagc 2940
tcactcatta ggcaccggga tctcgaccga tgcccttgag agccttcaac ccagtcagct 3000
ccttccggtg ggcgcggggc atgactatcg tcgccgcact tatgactgtc ttctttatca 3060
tgcaactcgt aggacaggtg ccggcagcgc tctgggtcat tttcggcgag gaccgctttc 3120
gctggagcgc gacgatgatc ggcctgtcgc ttgcggtatt cggaatcttg cacgccctcg 3180
ctcaagcctt cgtcactggt cccgccacca aacgtttcgg cgagaagcag gccattatcg 3240
ccggcatggc ggccccacgg gtgcgcatga tcgtgctcct gtcgttgagg acccggctag 3300
gctggcgggg ttgccttact ggttagcaga atgaatcacc gatacgcgag cgaacgtgaa 3360
gcgactgctg ctgcaaaacg tctgcgacct gagcaacaac atgaatggtc ttcggtttcc 3420
gtgtttcgta aagtctggaa acgcggaagt cagcgccctg caccattatg ttccggatct 3480
gcatcgcagg atgctgctgg ctaccctgtg gaacacctac atctgtatta acgaagcgct 3540
ggcattgacc ctgagtgatt tttctctggt cccgccgcat ccataccgcc agttgtttac 3600
cctcacaacg ttccagtaac cgggcatgtt catcatcagt aacccgtatc gtgagcatcc 3660
tctctcgttt catcggtatc attaccccca tgaacagaaa tcccccttac acggaggcat 3720
cagtgaccaa acaggaaaaa accgccctta acatggcccg ctttatcaga agccagacat 3780
taacgcttct ggagaaactc aacgagctgg acgcggatga acaggcagac atctgtgaat 3840
cgcttcacga ccacgctgat gagctttacc gcagctgcct cgcgcgtttc ggtgatgacg 3900
gtgaaaacct ctgacacatg cagctcccgg agacggtcac agcttgtctg taagcggatg 3960
ccgggagcag acaagcccgt cagggcgcgt cagcgggtgt tggcgggtgt cggggcgcag 4020
ccatgaccca gtcacgtagc gatagcggag tgtatactgg cttaactatg cggcatcaga 4080
gcagattgta ctgagagtgc accatatatg cggtgtgaaa taccgcacag atgcgtaagg 4140
agaaaatacc gcatcaggcg ctcttccgct tcctcgctca ctgactcgct gcgctcggtc 4200
gttcggctgc ggcgagcggt atcagctcac tcaaaggcgg taatacggtt atccacagaa 4260
tcaggggata acgcaggaaa gaacatgtga gcaaaaggcc agcaaaaggc caggaaccgt 4320
aaaaaggccg cgttgctggc gtttttccat aggctccgcc cccctgacga gcatcacaaa 4380
aatcgacgct caagtcagag gtggcgaaac ccgacaggac tataaagata ccaggcgttt 4440
ccccctggaa gctccctcgt gcgctctcct gttccgaccc tgccgcttac cggatacctg 4500
tccgcctttc tcccttcggg aagcgtggcg ctttctcata gctcacgctg taggtatctc 4560
agttcggtgt aggtcgttcg ctccaagctg ggctgtgtgc acgaaccccc cgttcagccc 4620
gaccgctgcg ccttatccgg taactatcgt cttgagtcca acccggtaag acacgactta 4680
tcgccactgg cagcagccac tggtaacagg attagcagag cgaggtatgt aggcggtgct 4740
acagagttct tgaagtggtg gcctaactac ggctacacta gaaggacagt atttggtatc 4800
tgcgctctgc tgaagccagt taccttcgga aaaagagttg gtagctcttg atccggcaaa 4860
caaaccaccg ctggtagcgg tggttttttt gtttgcaagc agcagattac gcgcagaaaa 4920
aaaggatctc aagaagatcc tttgatcttt tctacggggt ctgacgctca gtggaacgaa 4980
aactcacgtt aagggatttt ggtcatgaac aataaaactg tctgcttaca taaacagtaa 5040
tacaaggggt gttatgagcc atattcaacg ggaaacgtct tgctctaggc cgcgattaaa 5100
ttccaacatg gatgctgatt tatatgggta taaatgggct cgcgataatg tcgggcaatc 5160
aggtgcgaca atctatcgat tgtatgggaa gcccgatgcg ccagagttgt ttctgaaaca 5220
tggcaaaggt agcgttgcca atgatgttac agatgagatg gtcagactaa actggctgac 5280
ggaatttatg cctcttccga ccatcaagca ttttatccgt actcctgatg atgcatggtt 5340
actcaccact gcgatccccg ggaaaacagc attccaggta ttagaagaat atcctgattc 5400
aggtgaaaat attgttgatg cgctggcagt gttcctgcgc cggttgcatt cgattcctgt 5460
ttgtaattgt ccttttaaca gcgatcgcgt atttcgtctc gctcaggcgc aatcacgaat 5520
gaataacggt ttggttgatg cgagtgattt tgatgacgag cgtaatggct ggcctgttga 5580
acaagtctgg aaagaaatgc ataaactttt gccattctca ccggattcag tcgtcactca 5640
tggtgatttc tcacttgata accttatttt tgacgagggg aaattaatag gttgtattga 5700
tgttggacga gtcggaatcg cagaccgata ccaggatctt gccatcctat ggaactgcct 5760
cggtgagttt tctccttcat tacagaaacg gctttttcaa aaatatggta ttgataatcc 5820
tgatatgaat aaattgcagt ttcatttgat gctcgatgag tttttctaag aattaattca 5880
tgagcggata catatttgaa tgtatttaga aaaataaaca aataggggtt ccgcgcacat 5940
ttccccgaaa agtgccacct gaaattgtaa acgttaatat tttgttaaaa ttcgcgttaa 6000
atttttgtta aatcagctca ttttttaacc aataggccga aatcggcaaa atcccttata 6060
aatcaaaaga atagaccgag atagggttga gtgttgttcc agtttggaac aagagtccac 6120
tattaaagaa cgtggactcc aacgtcaaag ggcgaaaaac cgtctatcag ggcgatggcc 6180
cactacgtga accatcaccc taatcaagtt ttttggggtc gaggtgccgt aaagcactaa 6240
atcggaaccc taaagggagc ccccgattta gagcttgacg gggaaagccg gcgaacgtgg 6300
cgagaaagga agggaagaaa gcgaaaggag cgggcgctag ggcgctggca agtgtagcgg 6360
tcacgctgcg cgtaaccacc acacccgccg cgcttaatgc gccgctacag ggcgcgtccc 6420
attcgcca 6428