CN110628772A - Gene gammaCOPI and Its Application in Controlling Physalis Ladybug - Google Patents
Gene gammaCOPI and Its Application in Controlling Physalis Ladybug Download PDFInfo
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Abstract
Description
技术领域technical field
本发明属于虫害防控技术领域。更具体地,涉及一种防治酸浆瓢虫的靶基因及其应用。The invention belongs to the technical field of pest control. More specifically, it relates to a target gene for controlling Physalis ladybug and its application.
背景技术Background technique
酸浆瓢虫Henosepilachnavigintioctopunctata(Fabricius)属于鞘翅目瓢虫科,是一种重要的农业害虫,寄主植物十分广泛,主要为害茄子、马铃薯和番茄等茄科蔬菜。其幼虫和成虫均以叶片为食,喜群集于叶片背面,取食下表皮、叶肉,受害叶片通常形成不规则透明斑或穿孔,严重时造成植株萎蔫甚至整株死亡。酸浆瓢虫在我国的分布范围广泛,尤其是长江以南发生密度较大。近年来,由于气候变暖、贸易发展以及保护地蔬菜栽培面积的扩大,其食料一年四季不断,酸浆瓢虫的发生和为害愈加严重。2015年,我国启动了马铃薯主粮化战略,必将进一步扩大我国马铃薯的种植面积,酸浆瓢虫的防治刻不容缓。Physalis lady beetle Henosepilachnavigintioctopunctata (Fabricius) belongs to Coleoptera and is an important agricultural pest with a wide range of host plants. It mainly damages eggplant, potato and tomato and other solanaceous vegetables. Both the larvae and adults feed on the leaves. They like to cluster on the back of the leaves and feed on the lower epidermis and mesophyll. The damaged leaves usually form irregular transparent spots or perforations. In severe cases, the plants will wilt or even die. Physalis ladybug is widely distributed in my country, especially in the south of the Yangtze River. In recent years, due to climate warming, trade development, and the expansion of vegetable cultivation area in protected areas, its food is available all year round, and the occurrence and damage of Physalis ladybug have become more and more serious. In 2015, my country launched the potato staple food strategy, which will further expand the potato planting area in my country, and the control of Physalis ladybug is urgent.
目前,酸浆瓢虫的防治包括人工捕捉、引诱剂诱杀、化学农药。其中人工捕捉不仅效果差,还有十分繁重的劳力问题;而引诱剂诱杀的效果也不尽如人意,不彻底;因此更多还是依赖于化学农药,但是化学农药会引起环境污染和农产品质量安全等众多问题。At present, the control of Physalis ladybug includes artificial capture, trapping with attractants, and chemical pesticides. Among them, artificial capture is not only ineffective, but also has a very heavy labor problem; and the effect of attractant trapping is not satisfactory and incomplete; therefore, it still relies more on chemical pesticides, but chemical pesticides will cause environmental pollution and the quality and safety of agricultural products. and many other issues.
RNA干扰(RNA interference,RNAi)是一种在进化上保守,依赖于产生的短片段RNAs(siRNAs),从而促进同源mRNA的降解或抑制其翻译的作用机制。RNAi提供了一个在昆虫中进行功能基因组学研究的重要工具,且为开发对环境友好的害虫治理方法奠定了基础。由于使用RNAi技术可以特异性抑制基因的表达,所以该技术已经广泛应用于靶向干扰害虫基因从而达到防治害虫的目的,但是目前国内外对酸浆瓢虫基因功能研究较少,未有具有杀虫活性的靶标基因报道。RNA interference (RNA interference, RNAi) is an evolutionarily conserved mechanism that relies on the production of short fragments of RNAs (siRNAs), thereby promoting the degradation of homologous mRNAs or inhibiting their translation. RNAi provides an important tool for functional genomics research in insects and lays the foundation for the development of environmentally friendly pest management methods. Since the use of RNAi technology can specifically inhibit the expression of genes, this technology has been widely used in targeted interference with pest genes to achieve the purpose of pest control. Target gene reporter for insect activity.
本发明人团队前期研究显示(201710949193.9),利用直接饲喂合适的外源 dsRNA的方式即可实现对瓢虫的毒性,因此从基因层面开发适用于防治酸浆瓢虫的外源dsRNA产品,使用方便、成本低,更由于基因的特异性,可实现精确、优异的防治效果,对环境友好,在酸浆瓢虫的防治方面具有很大的应用前景。然而,相关靶标基因的筛选,以及防治效果好、特异、稳定的dsRNA的设计是最大的难题和关键问题。The previous research of the inventor's team showed (201710949193.9) that the toxicity to ladybugs can be achieved by directly feeding suitable exogenous dsRNA, so exogenous dsRNA products suitable for preventing and treating ladybug Physalis were developed from the genetic level. The method is convenient, low in cost, precise and excellent control effect can be realized due to the specificity of the gene, it is friendly to the environment, and has a great application prospect in the control of ladybug Physalis. However, the screening of relevant target genes and the design of dsRNA with good control effect, specificity and stability are the biggest difficulties and key issues.
发明内容Contents of the invention
本发明要解决的技术问题是克服现有酸浆瓢虫防治技术的缺陷和不足,提供一种酸浆瓢虫的高致死基因,即gammaCOPI基因。并基于该基因开发了能够高效防治酸浆瓢虫的技术,即直接饲喂对酸浆瓢虫具有高致死能力的靶标基因 dsRNA,利用dsgammaCOPI对酸浆瓢虫的致死效应达到防治目的。该方法操作方便、有效性和灵敏性好、杀虫效率高,且具有环境友好等诸多优点,有很好的应用前景。The technical problem to be solved by the present invention is to overcome the defects and deficiencies of the existing Physalis ladybug control technology, and provide a highly lethal gene of Physalis ladybug, that is, the gammaCOPI gene. And based on this gene, a technology that can effectively control ladybug Physalis has been developed, that is, direct feeding the target gene dsRNA that has a high lethality to Ladybug Physalis, and using the lethal effect of dsgammaCOPI on Ladybug Physalis to achieve the purpose of prevention and control. The method has many advantages such as convenient operation, good effectiveness and sensitivity, high insecticidal efficiency, and environmental friendliness, and has a good application prospect.
本发明的目的是提供一种酸浆瓢虫gammaCOPI基因及其防治酸浆瓢虫的应用。The purpose of the present invention is to provide a physalis beetle gammaCOPI gene and its application in preventing and treating the physalis beetle.
本发明另一目的是提供一种可用于防治酸浆瓢虫的gammaCOPI基因的 dsRNA及其应用。Another object of the present invention is to provide a dsRNA of the gammaCOPI gene that can be used to prevent and treat ladybug Physalis and its application.
本发明再一目的是提供一种防治酸浆瓢虫的方法及试剂盒。Another object of the present invention is to provide a method and a kit for preventing and treating ladybug Physalis.
本发明上述目的通过以下技术方案实现:The above object of the present invention is achieved through the following technical solutions:
本发明基于酸浆瓢虫的转录组文库,筛选得到一个高致死基因——gammaCOPI基因,并开发了饲喂gammaCOPI基因的dsRNA(dsgammaCOPI) 防治酸浆瓢虫的技术。本发明把茄子叶片分别浸泡在试剂盒合成的 dsgammaCOPI和dsGFP的溶液中,取出晾干后饲喂酸浆瓢虫的1龄幼虫2天,而后以未用dsRNA处理的茄子叶片饲喂,观察记录酸浆瓢虫的死亡率和发育状态;另外,用菌液表达dsgammaCOPI的方法测定了其对酸浆瓢虫1龄、3龄以及成虫的致死能力,进而全面的评价外源dsgammaCOPI对酸浆瓢虫的杀虫活性。最后,利用荧光定量PCR(qPCR)的方法检测分析了gammaCOPI基因在取食了dsgammaCOPI和dsGFP酸浆瓢虫中的表达量变化。结果显示,直接饲喂外源 dsgammaCOPI可显著抑制酸浆瓢虫gammaCOPI基因表达,直接饲喂外源 dsgammaCOPI对酸浆瓢虫具有很明显的致死效应。因此,以下主题及应用均应在本发明保护范围之内:The present invention is based on the transcriptome library of ladybug Physalis, obtains a highly lethal gene—gammaCOPI gene by screening, and develops the technology of feeding dsgammaCOPI gene gammaCOPI to control Ladybug Physalis. In the present invention, eggplant leaves are respectively soaked in the solutions of dsgammaCOPI and dsGFP synthesized by the kit, taken out and dried, and then fed to the first instar larvae of Physalis ladybug for 2 days, and then fed with eggplant leaves not treated with dsRNA, and observed and recorded Mortality and developmental status of ladybug Physalis; In addition, the method of expressing dsgammaCOPI in bacterial solution was used to measure its lethal ability to 1st instar, 3rd instar and adults of Physalis ladybug, so as to comprehensively evaluate the effect of exogenous dsgammaCOPI on Physalis ladybug. Insecticidal activity of insects. Finally, the quantitative PCR (qPCR) method was used to detect and analyze the expression level changes of the gammaCOPI gene in ladybugs that fed on dsgammaCOPI and dsGFP Physalis. The results showed that direct feeding of exogenous dsgammaCOPI could significantly inhibit the expression of gammaCOPI gene in ladybug Physalis, and direct feeding of exogenous dsgammaCOPI had obvious lethal effect on ladybug Physalis. Therefore, the following subjects and applications should all fall within the protection scope of the present invention:
一种酸浆瓢虫gammaCOPI基因,其序列如SEQ ID NO.1所示。A Physalis ladybug gammaCOPI gene, the sequence of which is shown in SEQ ID NO.1.
所述gammaCOPI基因在防治酸浆瓢虫或制备防治酸浆瓢虫的产品中的应用。The application of the gammaCOPI gene in preventing and treating ladybug Physalis or preparing products for preventing and treating ladybug Physalis.
所述gammaCOPI基因在抑制酸浆瓢虫生长或制备抑制酸浆瓢虫生长的产品中的应用。The application of the gammaCOPI gene in inhibiting the growth of the ladybug Physalis or preparing a product for inhibiting the growth of the ladybug Physalis.
所述gammaCOPI基因在促进酸浆瓢虫死亡或制备促进酸浆瓢虫死亡的产品中的应用。The application of the gammaCOPI gene in promoting the death of the ladybug Physalis or preparing a product for promoting the death of the ladybug Physalis.
所述gammaCOPI基因的抑制剂在防治酸浆瓢虫或制备防治酸浆瓢虫的产品中的应用。Application of the inhibitor of the gammaCOPI gene in preventing and treating ladybug Physalis or preparing products for preventing and treating ladybug Physalis.
一种可用于防治酸浆瓢虫的dsRNA,该dsRNA可靶向沉默gammaCOPI基因。优选地,dsRNA序列如SEQ ID NO.2所示。A dsRNA that can be used to control the Physalis ladybug, the dsRNA can target and silence the gammaCOPI gene. Preferably, the dsRNA sequence is shown in SEQ ID NO.2.
一种防治酸浆瓢虫的试剂盒,含有gammaCOPI基因抑制剂。优选地,所述抑制剂为上述dsRNA。A kit for preventing and controlling ladybug Physalis, containing gammaCOPI gene inhibitor. Preferably, the inhibitor is the aforementioned dsRNA.
具体地,利用gammaCOPI基因防治酸浆瓢虫的途径之一,即一种防治酸浆瓢虫的方法,直接饲喂外源dsRNA,使得dsgammaCOPI进入酸浆瓢虫体内,该 dsRNA可沉默/抑制酸浆瓢虫的gammaCOPI基因表达,抑制酸浆瓢虫生长、促进酸浆瓢虫死亡,从而达到防治酸浆瓢虫的目的。Specifically, one of the ways to use the gammaCOPI gene to control Physalis ladybug, that is, a method of controlling Physalis ladybug, directly feeds exogenous dsRNA, so that dsgammaCOPI enters Physalis ladybug, and the dsRNA can silence/inhibit acid The expression of the gammaCOPI gene of the physalis suppresses the growth of the physalis and promotes the death of the physalis, thereby achieving the purpose of preventing and controlling the physalis.
本发明具有以下有益效果:The present invention has the following beneficial effects:
本发明筛选得到一种酸浆瓢虫的高致死基因gammaCOPI基因,并开发了其高效沉默dsRNA,开发了能够高效防治酸浆瓢虫的技术,即直接饲喂对酸浆瓢虫具有高致死能力的靶标基因dsRNA,利用dsgammaCOPI对酸浆瓢虫的致死效应达到防治目的。该方法操作方便、有效性和灵敏性好、杀虫效率高,且具有环境友好等诸多优点,有很好的应用前景。The present invention screens and obtains a highly lethal gene gammaCOPI gene of ladybug Physalis, and develops its efficient silencing dsRNA, and develops a technology capable of efficiently preventing and treating Ladybug Physalis, that is, direct feeding has high lethality to Ladybug Physalis The target gene dsRNA is used to control the lethal effect of dsgammaCOPI on ladybug Physalis. The method has many advantages such as convenient operation, good effectiveness and sensitivity, high insecticidal efficiency, and environmental friendliness, and has a good application prospect.
附图说明Description of drawings
图1为菌液表达的dsGFP和dsgammaCOPI电泳图。Figure 1 is the electrophoresis diagram of dsGFP and dsgammaCOPI expressed in bacterial fluid.
图2为不同浓度的dsgammaCOPI对酸浆瓢虫幼虫死亡率的影响。利用实验开始后10天的幼虫死亡率数据,用Cox回归程序建立存活曲线。不同字母(如 a、b)表示对照曲线与处理曲线有显著性差异。Figure 2 is the effect of different concentrations of dsgammaCOPI on the mortality of ladybug larvae. Using data on larval mortality 10 days after the start of the experiment, survival curves were constructed using a Cox regression procedure. Different letters (such as a, b) indicate significant differences between the control curve and the treatment curve.
图3为取食菌液表达的dsgammaCOPI对酸浆瓢虫存活率的影响(图A:1 龄幼虫的存活率;图B:3龄幼虫的存活率;图C:成虫的存活率)。分别利用 10天、10天、14天的1龄幼虫、3龄幼虫和成虫的死亡率数据,用Cox回归程序建立存活曲线。不同字母(如a、b)表示对照曲线与处理曲线有显著性差异。Fig. 3 is the effect of dsgammaCOPI expressed in the bacterial liquid on the survival rate of ladybug Physalis (Fig. A: the survival rate of 1st instar larvae; Fig. B: the survival rate of 3rd instar larvae; Fig. C: the survival rate of adults). Using the mortality data of 1st instar larvae, 3rd instar larvae, and adults at 10 days, 10 days, and 14 days respectively, survival curves were constructed using a Cox regression program. Different letters (such as a, b) indicate significant differences between the control curve and the treatment curve.
图4为饲喂dsRNA开始的第3天,正常发育的dsGFP对照组(A)和死亡的dsgammaCOPI处理组(B)酸浆瓢虫表型差异。Figure 4 shows the phenotype difference between the normally developed dsGFP control group (A) and the dead dsgammaCOPI treatment group (B) Physalis ladybug on the 3rd day after feeding dsRNA.
图5为取食dsgammaCOPI和dsGFP后的第2天和第4天,酸浆瓢虫中 gammaCOPI基因表达量的变化。Fig. 5 shows the changes of gammaCOPI gene expression in ladybug Physalis on day 2 and day 4 after feeding on dsgammaCOPI and dsGFP.
具体实施方式Detailed ways
以下结合说明书附图和具体实施例来进一步说明本发明,但实施例并不对本发明做任何形式的限定。除非特别说明,本发明采用的试剂、方法和设备为本技术领域常规试剂、方法和设备。The present invention will be further described below in conjunction with the accompanying drawings and specific embodiments, but the embodiments do not limit the present invention in any form. Unless otherwise specified, the reagents, methods and equipment used in the present invention are conventional reagents, methods and equipment in the technical field.
除非特别说明,本发明所用试剂和材料均为市购。Unless otherwise specified, the reagents and materials used in the present invention are commercially available.
下述实施例中所用酸浆瓢虫,于华南农业大学昆虫学系饲养。饲养酸浆瓢虫的茄子为万盛元帅圆茄苗,将瓢虫放与含滤纸的培养皿中,滤纸用棉球保湿,放入人工气候箱中(温度25±1℃,湿度70%-80%,光周期L:D=14:10)进行繁殖。Physalis ladybugs used in the following examples were raised in the Department of Entomology, South China Agricultural University. The eggplants used to raise the Physalis ladybugs are Marshal Wansheng round eggplant seedlings. Put the ladybugs in a petri dish containing filter paper, keep the filter paper moist with cotton balls, and put them in an artificial climate box (temperature 25±1°C, humidity 70%- 80%, photoperiod L:D=14:10) for reproduction.
RNA提取利用TRIzol提取法(Invitrogen,USA),反转录试剂(PrimeScriptTM RTreagent Kit with gDNA Eraser)购自TAKARA生物技术有限公司,dsRNA合成试剂盒(MEGAscriptTM T7)购自Thermo Fisher Scientific,PCR反应体系所用试剂盒(EX TaqTM)购自TAKARA生物技术有限公司,DNA纯化回收试剂盒 (Universal DNA Purification Kit)购自天根生化科技(北京)有限公司。RNA was extracted using TRIzol extraction method (Invitrogen, USA), reverse transcription reagent (PrimeScript TM RTreagent Kit with gDNA Eraser) was purchased from TAKARA Biotechnology Co., Ltd., dsRNA synthesis kit (MEGAscript TM T7) was purchased from Thermo Fisher Scientific, PCR reaction The kit (EX Taq TM ) used in the system was purchased from TAKARA Biotechnology Co., Ltd., and the DNA purification and recovery kit (Universal DNA Purification Kit) was purchased from Tiangen Biochemical Technology (Beijing) Co., Ltd.
以下实施例的数据处理方法:对于两种类型的dsRNA对酸浆瓢虫进行生物测定的结果分析,使用Excel 2010对酸浆瓢虫的存活率进行统计,利用SPSS 19.0 软件采用Cox回归分析作图,不同浓度间的差异性分析采用单因素分析。对RNA 干扰后靶标基因表达量变化的分析,qPCR数据采用2-△△Ct法(Ct表示循环数) 进行计算。应用SPSS 19.0软件采用单因素方差分析进行数据分析。The data processing method of following embodiment: For the result analysis that two types of dsRNA carry out bioassay to Ladybug Physalis, use Excel 2010 to carry out statistics to the survival rate of Ladybug Physalis, utilize SPSS 19.0 software to adopt Cox regression analysis to draw a graph , The difference between different concentrations was analyzed by single factor analysis. For the analysis of changes in the expression of target genes after RNA interference, the qPCR data was calculated using the 2 -△△Ct method (Ct represents the number of cycles). Data analysis was performed using SPSS 19.0 software using one-way analysis of variance.
实施例1生长发育相关基因gammaCOPIdsRNA的获得Example 1 Obtaining of growth and development-related gene gammaCOPIdsRNA
我们根据酸浆瓢虫的基因组构建其转录组文库,再基于构建的转录组文库,研究筛选与酸浆瓢虫生长发育相关基因,筛选得到gammaCOPI基因片段,如SEQ ID NO.1所示。然后合成dsRNA。We constructed a transcriptome library based on the genome of ladybug Physalis, and then based on the constructed transcriptome library, researched and screened genes related to the growth and development of Ladybug Physalis, and screened to obtain the gammaCOPI gene fragment, as shown in SEQ ID NO.1. The dsRNA is then synthesized.
1、酸浆瓢虫总RNA提取及第一链cDNA的合成。1. Physalis ladybug total RNA extraction and first-strand cDNA synthesis.
取酸浆瓢虫的2龄幼虫10只于2ml离心管中,利用TRIzol法提取酸浆瓢虫的总RNA,RNA的浓度和质量利用NanoDropOneC进行测定,利用反转录试剂盒(PrimeScriptTM RTreagent Kit with gDNA Eraser,TAKARA)依照说明书步骤进行反转录,合成cDNA第一链。Get 10 2nd instar larvae of Ladybug Physalis in a 2ml centrifuge tube, use the TRIzol method to extract the total RNA of Ladybug Physalis, use NanoDropOne C to measure the concentration and quality of RNA, and use a reverse transcription kit (PrimeScript TM RTreagent Kit with gDNA Eraser, TAKARA) was reverse-transcribed according to the instructions, and the first strand of cDNA was synthesized.
2、引物设计2. Primer design
从酸浆瓢虫的转录组文库中得到gammaCOPI的基因序列,设计gammaCOPI 基因的dsRNA引物P1(表1),绿色荧光蛋白基因(GFP)从实验室保存的含有GFP的质粒上扩增获得,GFP基因的dsRNA引物P2(表1)。在dsgammaCOPI 的引物P1和dsGFP的引物P2上分别加上与酶切位点相关的同源臂,设计与 dsgammaCOPI构建表达载体相关的引物P3,与dsGFP构建表达载体相关的引物 P4(表1)。根据gammaCOPI基因的序列,设计gammaCOPI基因的qPCR引物P5,内参基因GAPDH的qPCR引物P6(表1)。The gene sequence of gammaCOPI was obtained from the transcriptome library of ladybug Physalis, and the dsRNA primer P1 (Table 1) of the gammaCOPI gene was designed. The green fluorescent protein gene (GFP) was amplified from a plasmid containing GFP preserved in the laboratory. GFP Gene dsRNA primer P2 (Table 1). Homology arms related to restriction sites were added to primer P1 of dsgammaCOPI and primer P2 of dsGFP respectively, and primer P3 related to the construction of expression vector of dsgammaCOPI and primer P4 related to construction of expression vector of dsGFP were designed (Table 1). According to the sequence of the gammaCOPI gene, the qPCR primer P5 of the gammaCOPI gene and the qPCR primer P6 of the internal reference gene GAPDH were designed (Table 1).
表1:dsRNA合成及qPCR引物Table 1: dsRNA synthesis and qPCR primers
3、试剂盒合成gammaCOPI基因和GFP基因的dsRNAs3. The kit synthesizes dsRNAs of gammaCOPI gene and GFP gene
利用表1中的引物P1和P2进行PCR扩增,PCR扩增的反应体系为10x EX Taq Buffer5μL、TaKaRa EX Taq 0.25μL、dNTP Mixture 4μL、上游引物(10 μmoL/L)1μL、下游引物(10μmoL/L)1μL、cDNA/GFP质粒1μL,dd H2O补齐至50μL。PCR扩增的反应程序为94℃预变性3min;94℃变性30s,55℃退火30s,72℃延伸1min,共30个循环;72℃延伸5min。将扩增产物置于4℃保存。程序反应完成后,利用琼脂糖凝胶电泳法对扩增结果进行检测。Use the primers P1 and P2 in Table 1 for PCR amplification. The reaction system for PCR amplification is 5 μL of 10x EX Taq Buffer, 0.25 μL of TaKaRa EX Taq, 4 μL of dNTP Mixture, 1 μL of upstream primer (10 μmoL/L), 1 μL of downstream primer (10 μmoL /L) 1 μL, cDNA/GFP plasmid 1 μL, filled to 50 μL with dd H 2 O. The reaction program of PCR amplification was pre-denaturation at 94°C for 3 min; denaturation at 94°C for 30 s, annealing at 55°C for 30 s, extension at 72°C for 1 min, a total of 30 cycles; extension at 72°C for 5 min. Store the amplified product at 4°C. After the programmed reaction is completed, the amplification result is detected by agarose gel electrophoresis.
用DNA纯化回收试剂盒(Universal DNA Purification Kit,TIANGEN)回收纯化上述得到的两种PCR产物,作为体外转录dsRNA的模版,dsRNA的体外转录体系为10x ReactionBuffer 5μL、(ATP、GTP、CTP、UTP)溶液各5μL、 Enzyme mix 5μL、模版20μL,ddH2O补足至50μL。37℃放置4h。反应结束后加入2.5μL的TURBO DNase去除残留的模版DNA和单链RNA,然后纯化 dsRNA,最后用50μL ddH2O溶解dsRNA,分别得到dsgammaCOPI和dsGFP,用1.5%的琼脂糖凝胶电泳验证dsRNA的条带。Use the DNA Purification Kit (Universal DNA Purification Kit, TIANGEN) to recover and purify the two PCR products obtained above, and use them as templates for in vitro transcription of dsRNA. The in vitro transcription system for dsRNA is 10x ReactionBuffer 5 μL, (ATP, GTP, CTP, UTP) Each solution was 5 μL, Enzyme mix 5 μL, template 20 μL, and ddH 2 O was added to 50 μL. Place at 37°C for 4h. After the reaction, add 2.5 μL TURBO DNase to remove residual template DNA and single-stranded RNA, then purify the dsRNA, and finally dissolve the dsRNA with 50 μL ddH 2 O to obtain dsgammaCOPI and dsGFP respectively, and use 1.5% agarose gel electrophoresis to verify the dsRNA Bands.
酸浆瓢虫的gammaCOPIdsRNA为双链RNA,由正义链和反义链组成,其正义链的核苷酸序列为序列表中的SEQ ID NO.1,其反义链的核苷酸序列为序列表中SEQ ID NO.1的反向互补序列,gammaCOPIdsRNA编码基因的核苷酸序列为序列表中的SEQ ID NO.1。GFP dsRNA为双链RNA,由正义链和反义链组成,其正义链的核苷酸序列为序列表中的SEQ ID NO.2,其反义链的核苷酸序列为序列表中SEQ ID NO.2的反向互补序列。The gammaCOPIdsRNA of ladybug Physalis is a double-stranded RNA consisting of a sense strand and an antisense strand. The nucleotide sequence of its sense strand is SEQ ID NO.1 in the sequence table, and the nucleotide sequence of its antisense strand is sequence The reverse complementary sequence of SEQ ID NO.1 in the list, the nucleotide sequence of the gene encoding gammaCOPIdsRNA is SEQ ID NO.1 in the sequence list. GFP dsRNA is a double-stranded RNA consisting of a sense strand and an antisense strand. The nucleotide sequence of its sense strand is SEQ ID NO.2 in the sequence listing, and the nucleotide sequence of its antisense strand is SEQ ID NO.2 in the sequence listing. The reverse complementary sequence of NO.2.
4、生长发育相关基因gammaCOPI菌液表达dsRNA的获得4. Acquisition of growth and development-related gene gammaCOPI bacterial liquid expression dsRNA
在L4440的序列上选择两个酶切位点,分别为BamHI(GGATCC)和SacI (GAGCTC)。根据L4440的序列信息(此序列信息已经公开),在dsgammaCOPI 的引物P1和dsGFP的引物P2上分别加上与两个酶切位点相关的同源臂,设计与dsgammaCOPI构建表达载体相关的引物P3,与dsGFP构建表达载体相关的引物P4(表1)。PCR扩增的cDNA模板、反应体系及扩增程序如上文所示,得到构建载体的dsgammaCOPI和dsGFP的目的片段,用DNA纯化回收试剂盒(Universal DNA Purification Kit,TIANGEN)回收上述得到的两种PCR产物。根据两个酶切位点的序列利用QuickCutTM SacI和QuickCutTM BamHI将L4440 载体线性化,酶切的反应体系详见说明书,酶切反应完成后,用DNA纯化回收试剂盒(Universal DNA PurificationKit,TIANGEN)回收线性化的L4440载体。Two restriction sites were selected on the sequence of L4440, namely BamHI (GGATCC) and SacI (GAGCTC). According to the sequence information of L4440 (this sequence information has been published), the dsgammaCOPI primer P1 and the dsGFP primer P2 respectively add homology arms related to the two restriction sites, and design the primer P3 related to the construction of the expression vector of dsgammaCOPI , Primer P4 (Table 1) related to construction of expression vector for dsGFP. The cDNA template, reaction system, and amplification procedure for PCR amplification were as described above, and the target fragments of dsgammaCOPI and dsGFP were obtained to construct the vector, and the two PCR products obtained above were recovered with a DNA purification and recovery kit (Universal DNA Purification Kit, TIANGEN). product. According to the sequences of the two enzyme cutting sites, the L4440 vector was linearized using QuickCut TM SacI and QuickCut TM BamHI. For the enzyme digestion reaction system, please refer to the instruction manual. ) to recover the linearized L4440 vector.
利用广州擎科生物科技有限公司的TreliefTMSoSoo Cloning Kit Ver.2试剂盒分别将dsGFP和dsgammaCOPI与线性化的L4440载体在50℃反应20min,进行重组。随后将含有dsgammaCOPI和dsGFP的重组表达载体导入到HT115感受态细胞中,置于冰上放置30min,随后37℃热激1min;在冰上静置3min,然后加入不含氨苄的LB液体培养基700μL,在37℃,210rpm的条件下培养1h,之后用含有氨苄和四环素的LB平板过夜培养。挑取单菌落放置在4ml含有氨苄 (100μg/mL)和四环素(10μg/mL)的LB液体培养基中,37℃,210rpm培养 12h,然后取50μL转移到5mL含有氨苄(100μg/mL)和四环素(10μg/mL) 的LB液体培养基中,37℃,210rpm培养3h,使菌液的OD值在0.5-0.8之间,加入1mM的IPTG,37℃,120rpm培养5h,诱导dsRNA。将含有dsGFP和 dsgammaCOPI的两种菌液,在4℃,5000rpm的条件下收集菌丝,利用TRIzol 提取法(Invitrogen,USA)提取RNA,用1.5%的琼脂糖凝胶电泳,验证是否成功诱导dsRNA。Using the Trelief TM SoSoo Cloning Kit Ver.2 kit from Guangzhou Qingke Biotechnology Co., Ltd., dsGFP and dsgammaCOPI were reacted with the linearized L4440 vector at 50°C for 20 minutes for recombination. Subsequently, the recombinant expression vector containing dsgammaCOPI and dsGFP was introduced into HT115 competent cells, placed on ice for 30 minutes, then heat-shocked at 37°C for 1 minute; stood on ice for 3 minutes, and then added 700 μL of LB liquid medium without ampicillin , cultured at 37°C and 210 rpm for 1 h, and then cultured overnight on LB plates containing ampicillin and tetracycline. Pick a single colony and place it in 4ml LB liquid medium containing ampicillin (100μg/mL) and tetracycline (10μg/mL), culture at 37°C, 210rpm for 12h, then transfer 50μL to 5mL containing ampicillin (100μg/mL) and tetracycline (10 μg/mL) LB liquid medium, 37 ° C, 210 rpm for 3 h, so that the OD value of the bacterial solution is between 0.5-0.8, add 1 mM IPTG, 37 ° C, 120 rpm for 5 h to induce dsRNA. The mycelia were collected from the two bacterial solutions containing dsGFP and dsgammaCOPI at 4°C and 5000 rpm, RNA was extracted by TRIzol extraction method (Invitrogen, USA), and electrophoresed on 1.5% agarose gel to verify whether dsRNA was successfully induced .
5、结果5. Results
用P1引物进行扩增,得到大小为431bp的PCR扩增产物,经测序并删去 T7启动子序列后,得到大小为391bp的核苷酸序列即为目的基因gammaCOPI,如SEQ ID NO.2所示。以载有GFP的质粒为模版,用P2引物进行扩增,得到大小为507bp的PCR产物,dsGFP和dsgammaCOPI的目的条带与测序结果相符。Use the P1 primer to amplify to obtain a PCR amplification product with a size of 431bp. After sequencing and deleting the T7 promoter sequence, the nucleotide sequence obtained with a size of 391bp is the target gene gammaCOPI, as shown in SEQ ID NO.2 Show. Using the plasmid carrying GFP as a template and using P2 primers to amplify, a PCR product with a size of 507 bp was obtained. The target bands of dsGFP and dsgammaCOPI were consistent with the sequencing results.
利用菌液表达目的基因的dsRNA,提取菌丝的RNA,利用琼脂糖凝胶电泳验证是否成功诱导出目的基因的dsRNA,根据电泳结果(图1)可以看到成功诱导出dsGFP和dsgammaCOPI的目的条带。Use bacterial liquid to express the dsRNA of the target gene, extract the RNA of the hyphae, and use agarose gel electrophoresis to verify whether the dsRNA of the target gene is successfully induced. According to the electrophoresis results (Figure 1), you can see the target items that successfully induced dsGFP and dsgammaCOPI bring.
实施例2 dsRNA对酸浆瓢虫的抑制作用Example 2 Inhibitory effect of dsRNA on ladybug Physalis
1、试剂盒合成的dsRNA在抑制酸浆瓢虫生长发育中的应用1. The application of the dsRNA synthesized by the kit in inhibiting the growth and development of ladybug Physalis
酸浆瓢虫dsgammaCOPI喂养组:在放有滤纸和加湿棉球的培养皿中放入10 只酸浆瓢虫的1龄幼虫。分别用浓度10ng/μL、5ng/μL、3ng/μL、和2ng/μL 的dsgammaCOPI溶液浸泡直径12mm的圆形茄子叶盘1min,室温风干1h后饲喂幼虫,每隔24h更换一次叶盘,连续饲喂dsgammaCOPI浸泡的叶盘两天后,用正常茄子叶片饲喂幼虫。Physalis ladybug dsgamma COPI feeding group: put 10 1st instar larvae of Physalis ladybug in a petri dish with filter paper and humidified cotton balls. Soak circular eggplant leaf discs with a diameter of 12 mm in dsgamma COPI solutions with a concentration of 10 ng/μL, 5 ng/μL, 3 ng/μL, and 2 ng/μL for 1 min, air-dry them at room temperature for 1 h, and then feed the larvae. Replace the leaf discs every 24 h, continuously Two days after feeding dsgammaCOPI-soaked leaf discs, larvae were fed with normal eggplant leaves.
酸浆瓢虫dsGFP喂养组:在放有滤纸和加湿棉球的培养皿中放入10只酸浆瓢虫的1龄幼虫。用试剂盒合成的浓度10ng/uL的dsGFP溶液浸泡直径12mm 的圆形茄子叶盘1min,风干1h后饲喂幼虫,每隔24h更换一次叶盘,连续饲喂dsGFP浸泡的叶盘两天后,用未经处理的茄子叶片饲喂幼虫。Physalis ladybug dsGFP feeding group: put 10 1st instar larvae of Physalis ladybug in a petri dish with filter paper and humidified cotton balls. Soak circular eggplant leaf disks with a diameter of 12 mm in the dsGFP solution synthesized by the kit for 1 min, air-dry them for 1 hour, and then feed the larvae, replace the leaf disks every 24 hours, and feed the dsGFP-soaked leaf disks continuously for two days. Untreated eggplant leaves feed the larvae.
每组设置5个重复,每隔24h统计每个培养皿中酸浆瓢虫的死亡数目,并更换新的叶片,培养皿置于人工气候箱(温度25±1℃,湿度70%-80%,光周期 L:D=14:10)。统计各组每个培养皿中酸浆瓢虫的死亡个数,计算对照组和不同浓度dsRNA处理下酸浆瓢虫的存活率变化。Every group is set 5 repetitions, counts the death number of ladybug physalis in each petri dish every 24h, and replaces new blade, and petri dish is placed in artificial climate chamber (temperature 25 ± 1 ℃, humidity 70%-80%) , photoperiod L:D=14:10). The number of dead physalis beetles in each petri dish of each group was counted, and the survival rate changes of the control group and dsRNA treatments with different concentrations were calculated.
2、菌液表达的dsgammaCOPI对酸浆瓢虫致死效应的应用2. The application of dsgammaCOPI expressed in bacterial liquid to the lethal effect of Physalis ladybug
酸浆瓢虫dsgammaCOPI喂养组:在放有滤纸和加湿棉球的培养皿中10只1 龄幼虫、10只3龄幼虫、5只成虫,一共设置3组实验,每组设置5个重复。用表达dsgammaCOPI的菌液浸泡直径12mm的圆形茄子叶盘1min,室温风干1h 后饲喂幼虫。处理组中的1龄幼虫每个培养皿中放置2片叶盘;3龄幼虫的每个培养皿中放置5片叶盘;成虫的每个培养皿中放置5片叶盘。每隔24h更换一次叶盘,连续饲喂dsgammaCOPI菌液浸泡的叶盘两天后,用正常茄子叶片饲喂。Physalis ladybug dsgamma COPI feeding group: 10 1st instar larvae, 10 3rd instar larvae, and 5 adults were placed in a petri dish with filter paper and humidified cotton balls, and a total of 3 groups of experiments were set up, with 5 repetitions in each group. Soak a round eggplant leaf disc with a diameter of 12 mm in the bacterial solution expressing dsgammaCOPI for 1 min, air-dry at room temperature for 1 h, and then feed the larvae. In the treatment group, 2 leaf discs were placed in each petri dish for the 1st instar larvae; 5 leaf discs were placed in each petri dish for the 3rd instar larvae; 5 leaf discs were placed in each petri dish for adults. The leaf disks were replaced every 24 hours, and the leaf disks soaked in the dsgammaCOPI bacterial solution were continuously fed for two days, and then fed with normal eggplant leaves.
酸浆瓢虫dsGFP喂养组:在放有滤纸和加湿棉球的培养皿中放入10只1龄幼虫、10只3龄幼虫、5只成虫,一共设置3组对照,每组设置5个重复。用表达dsGFP的菌液浸泡直径12mm的圆形茄子叶片1min,室温风干1h后饲喂幼虫。对照组中的1龄幼虫每个培养皿中放置2片叶盘;3龄幼虫的每个培养皿中放置5片叶盘;成虫的每个培养皿中放置5片叶盘。每隔24h更换一次叶盘,连续饲喂dsGFP菌液浸泡的叶盘两天后,用正常茄子叶片饲喂。Physalis ladybug dsGFP feeding group: Put 10 1st instar larvae, 10 3rd instar larvae, and 5 adults in a petri dish with filter paper and humidified cotton balls, set 3 groups of controls in total, and set 5 replicates in each group . Soak round eggplant leaves with a diameter of 12 mm in the bacterial solution expressing dsGFP for 1 min, air-dry them at room temperature for 1 h, and then feed them to larvae. In the control group, 2 leaf discs were placed in each petri dish for 1st instar larvae; 5 leaf discs were placed in each petri dish for 3rd instar larvae; 5 leaf discs were placed in each petri dish for adults. The leaf disks were replaced every 24 hours, and the leaf disks soaked in the dsGFP bacterial solution were continuously fed for two days, and then fed with normal eggplant leaves.
每隔24h统计每个培养皿中酸浆瓢虫的死亡数目,并更换新的叶片,培养皿置于人工气候箱(温度25±1℃,湿度70%-80%,光周期L:D=14:10)。统计各组每个培养皿中酸浆瓢虫的死亡个数,计算对照和不同处理组酸浆瓢虫存活率的变化。Count the dead number of ladybug physalis in each petri dish every 24h, and replace new blade, petri dish is placed in artificial climate box (temperature 25 ± 1 ℃, humidity 70%-80%, photoperiod L: D= 14:10). Count the number of dead ladybugs in each petri dish in each group, and calculate the changes in the survival rate of ladybugs in the control and different treatment groups.
3、根据统计的结果可知,连续饲喂酸浆瓢虫1龄幼虫dsgammaCOPI两天后,酸浆瓢虫1龄幼虫的存活率随着时间的增加而呈现下降的趋势,处理组的饲喂浓度分别是2ng/μL、3ng/μL、5ng/μL和10ng/μL,对照组的饲喂浓度为10ng/μL。根据图2的结果,发现不同浓度的处理组之间和对照组之间均存在显著性差异 (χ2=71.900,df=4,P<0.0001)。处理组2ng/μL(P<0.0001,Exp(B)=5.812) 和5ng/μL(P<0.0001,Exp(B)=11.603)与10ng/μL(P<0.0001,Exp(B)=13.604) 之间存在都显著性的差异;2ng/μL(P<0.0001,Exp(B)=5.812)和3ng/μL(P< 0.0001,Exp(B)=8.506)之间没有显著性的差异;3ng/μL(P<0.0001,Exp(B)=8.506)、5ng/μL(P<0.0001,Exp(B)=11.603)、10ng/μL(P<0.0001,Exp(B) =13.604)之间没有显著性的差异。从统计的结果中可以得到以下结论,当处理组的浓度分别为2ng/μL、3ng/μL、5ng/μL和10ng/μL与对照组相比死亡率分别增加5.812倍、8.506倍、11.603倍、13.604倍。3. According to the statistical results, after two days of continuous feeding of the 1st instar larvae of Physalis ladybug dsgammaCOPI, the survival rate of the 1st instar larvae of Physalis ladybug showed a downward trend with the increase of time, and the feeding concentrations of the treatment groups were respectively It is 2ng/μL, 3ng/μL, 5ng/μL and 10ng/μL, and the feeding concentration of the control group is 10ng/μL. According to the results in Figure 2, it was found that there were significant differences between the treatment groups of different concentrations and between the control groups (χ2=71.900, df=4, P<0.0001). Treatment group 2ng/μL (P<0.0001, Exp(B)=5.812) and 5ng/μL (P<0.0001, Exp(B)=11.603) and 10ng/μL (P<0.0001, Exp(B)=13.604) There were significant differences between them; there was no significant difference between 2ng/μL (P<0.0001, Exp(B)=5.812) and 3ng/μL (P<0.0001, Exp(B)=8.506); 3ng/μL (P<0.0001, Exp(B)=8.506), 5ng/μL (P<0.0001, Exp(B)=11.603), 10ng/μL (P<0.0001, Exp(B)=13.604) difference. From the statistical results, the following conclusions can be drawn, when the concentration of the treatment group was 2ng/μL, 3ng/μL, 5ng/μL and 10ng/μL, compared with the control group, the mortality rate increased by 5.812 times, 8.506 times, 11.603 times, 13.604 times.
根据统计的结果可知(如图3),连续饲喂酸浆瓢虫菌液表达的dsgammaCOPI 两天后,1龄幼虫(P<0.0001,Exp(B)=26.275),3龄幼虫(P<0.0001,Exp(B) =24.186)和成虫(P=0.002,Exp(B)=7.427)的存活率和对照组相比均存在显著性的差异,处理组的1龄幼虫,3龄幼虫和成虫与对照组相比死亡率分别增加了 26.275倍,24.186倍和7.427倍。According to the statistical results (as shown in Figure 3), after two days of continuous feeding of dsgammaCOPI expressed by the Physalis ladybug bacterium liquid, the 1st instar larvae (P<0.0001, Exp(B)=26.275), the 3rd instar larvae (P<0.0001, Exp (B) = 24.186) and adult (P = 0.002, Exp (B) = 7.427) survival rate compared with the control group there is a significant difference, the 1st instar larvae of the treatment group, the 3rd instar larvae and adults and the control group Compared with the group, the mortality rate increased by 26.275 times, 24.186 times and 7.427 times respectively.
另外,用显微镜观察饲喂dsgammaCOPI两天后,酸浆瓢虫表型特征的变化。发现从饲喂dsgammaCOPI开始的第3天,dsGFP对照组的酸浆瓢虫正常进入2 龄阶段,处理组中的幼虫无法正常蜕皮进入2龄阶段而死亡,表型特征表现为幼虫前胸背板的枝刺和斑点无法形成如图4所示,说明取食dsgammaCOPI能够在酸浆瓢虫的体内引发强烈的RNAi效应,导致瓢虫死亡。In addition, the changes in the phenotypic characteristics of ladybug Physalis after feeding dsgammaCOPI for two days were observed with a microscope. It was found that on the third day after feeding dsgammaCOPI, the Physalis ladybugs in the dsGFP control group normally entered the second instar stage, while the larvae in the treatment group could not molt normally and entered the second instar stage and died. The thorns and spots could not be formed, as shown in Figure 4, indicating that feeding on dsgammaCOPI can trigger a strong RNAi effect in the ladybug Physalis, resulting in the death of the ladybug.
实施例3 dsgammaCOPI抑制酸浆瓢虫体内gammaCOPI基因的表达Example 3 dsgammaCOPI inhibits the expression of gammaCOPI gene in ladybug Physalis
1、实验方法1. Experimental method
分别在开始取食dsRNA后的第2天和第4天,收集用5ng/μL dsgammaCOPI 和dsGFP处理的酸浆瓢虫1龄幼虫,每个处理收集3个生物学重复。提取收集酸浆瓢虫的RNA,然后反转录成cDNA,稀释10倍作为qPCR的模版。以P5 和P6作为引物进行qPCR分析。qPCR体系为(15μL)包含5.25μL的ddH2O, 7.5μL的2×SYBR Green MasterMix(BIO-RAD Inc,Hercules,CA),4μM引物和1.0μL的cDNA第一链模版。qPCR的反应仪器Bio-Rad C1000Real-Time PCRsystem(BIO-RAD,USA)。反应条件为95℃5min;95℃10s,60℃30s,39 个循环,每个样本3个技术重复,反应在96孔板(BIO-RAD,USA)中进行。The 1st instar larvae of Physalis physalis treated with 5 ng/μL dsgammaCOPI and dsGFP were collected on the 2nd day and 4th day after starting to feed on dsRNA, respectively, and 3 biological replicates were collected for each treatment. Extract and collect the RNA of ladybug Physalis, then reverse transcribe it into cDNA, and dilute it 10 times as a template for qPCR. qPCR analysis was performed with P5 and P6 as primers. The qPCR system was (15 μL) containing 5.25 μL of ddH 2 O, 7.5 μL of 2×SYBR Green MasterMix (BIO-RAD Inc, Hercules, CA), 4 μM primers and 1.0 μL of cDNA first-strand template. The reaction instrument for qPCR was Bio-Rad C1000 Real-Time PCR system (BIO-RAD, USA). The reaction conditions were 95°C for 5 min; 95°C for 10 s, 60°C for 30 s, 39 cycles, 3 technical replicates for each sample, and the reaction was carried out in a 96-well plate (BIO-RAD, USA).
2、实验结果2. Experimental results
以饲喂dsGFP为对照,分别统计饲喂dsgammaCOPI后在第2天和4天,酸浆瓢虫体内gammaCOPI基因的相对表达量变化(如图5所示)。从图5中可以看出饲喂dsgammaCOPI的酸浆瓢虫体内基因gammaCOPI的表达量与饲喂 dsGFP的酸浆瓢虫体内基因gammaCOPI的表达量相比,呈现明显的下降趋势。进一步说明通过饲喂dsgammaCOPI能够在酸浆瓢虫体内引起强烈的RNAi效应,导致体内gammaCOPI基因的表达量明显降低,进而导致酸浆瓢虫死亡或发育受到抑制。从饲喂dsgammaCOPI开始的第2天,gammaCOPI的表达量与对照组相比没有显著性差异(F1,4=8.089,P=0.047);从饲喂dsgammaCOPI开始的第4 天,gammaCOPI基因的表达量与对照组相比下降了9.87倍(F1,4=3926.778,P< 0.0001),进一步说明通过饲喂dsgammaCOPI能够在酸浆瓢虫体内引起强烈的 RNAi效应,导致体内gammaCOPI基因的表达量明显降低,进而导致酸浆瓢虫发育受到抑制或死亡。Taking dsGFP as a control, the changes in the relative expression of gammaCOPI gene in ladybug Physalis on day 2 and day 4 after feeding dsgammaCOPI were counted (as shown in FIG. 5 ). It can be seen from Figure 5 that the expression of gene gammaCOPI in ladybugs fed with dsgammaCOPI showed a clear downward trend compared with the expression of gene gammaCOPI in ladybugs fed with dsGFP. It further shows that feeding dsgammaCOPI can cause a strong RNAi effect in the Physalis ladybug, resulting in a significant decrease in the expression of the gammaCOPI gene in the body, which in turn leads to the death or development of Physalis ladybug. From the 2nd day of feeding dsgammaCOPI, the expression of gammaCOPI had no significant difference compared with the control group (F 1,4 =8.089, P=0.047); from the 4th day of feeding dsgammaCOPI, the expression of gammaCOPI gene Compared with the control group, the amount decreased by 9.87 times (F 1,4 =3926.778, P<0.0001), further indicating that feeding dsgammaCOPI can cause a strong RNAi effect in the body of ladybug Physalis, resulting in a significant expression of gammaCOPI gene in vivo. Reduced, which in turn leads to the development inhibition or death of Physalis ladybug.
上述实施例为本发明较佳的实施方式,但本发明的实施方式并不受上述实施例的限制,其他的任何未背离本发明的精神实质与原理下所作的改变、修饰、替代、组合、简化,均应为等效的置换方式,都包含在本发明的保护范围之内。The above-mentioned embodiment is a preferred embodiment of the present invention, but the embodiment of the present invention is not limited by the above-mentioned embodiment, and any other changes, modifications, substitutions, combinations, Simplifications should be equivalent replacement methods, and all are included in the protection scope of the present invention.
SEQUENCE LISTINGSEQUENCE LISTING
<110> 华南农业大学<110> South China Agricultural University
<120> 基因gammaCOPI及其在防治酸浆瓢虫中的应用<120> Gene gammaCOPI and its application in controlling ladybug Physalis
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MINAKUCHI, C等: "Role of scalloped in the post-embryonic development of the red flour beetle Tribolium castaneum (Coleoptera: Tenebrionidae)", 《APPLIED ENTOMOLOGY AND ZOOLOGY》 * |
张盼: "淮安地区茄二十八星瓢虫的发生与防治", 《上海蔬菜》 * |
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