CN110551195A - Alpha-synuclein aggregation-induced emission system and construction and application thereof - Google Patents
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Abstract
Description
技术领域:Technical field:
本发明属于生物技术和化学工程领域,特别涉及一种α-突触核蛋白聚集诱导发光体系的构建,并利用该体系应用于α-突触核蛋白聚集抑制剂的筛选中。具体为含非天然氨基酸的α-突触核蛋白在大肠杆菌中表达纯化、聚集诱导发光探针的无痕添加及聚集抑制剂的筛选。The invention belongs to the fields of biotechnology and chemical engineering, in particular to the construction of an α-synuclein aggregation-induced luminescence system, and the system is used in the screening of α-synuclein aggregation inhibitors. Specifically, the expression and purification of α-synuclein containing unnatural amino acid in Escherichia coli, the traceless addition of aggregation-induced luminescent probes, and the screening of aggregation inhibitors.
背景技术:Background technique:
淀粉样蛋白在细胞和组织中的聚集和错误折叠形成有毒性的中间体和淀粉样纤维可能导致各种生物学机能障碍。这些聚集中间体和纤维推测与一些神经退行性疾病和其他病症相关,例如阿尔兹海默症(Alzheimer’s disease,AD)、帕金森综合征(Parkinson’sdisease,PD)、二型糖尿病(diabetes type II)等。大量研究已经证明毒性较大的部分为低聚物或原纤维中间体,成熟纤维可能也扮演重要角色。开发有效的淀粉样蛋白聚集抑制剂成为治疗这些疾病药物研发领域的有效手段之一,因此,灵敏且有说服力的检测淀粉样纤维或中间体方法及详细的对纤维形成机制在分子水平方面的认识,有助于治疗方案的理性设计,用于预防和减缓有毒的淀粉样片段带来的机体损伤。近年来,一些对淀粉样纤维的结构、形态学、淀粉样蛋白的全长等方面的研究已取得突破性进展,然而淀粉样蛋白错误折叠的分子层面聚集机制仍未探明。The aggregation and misfolding of amyloid in cells and tissues to form toxic intermediates and amyloid fibrils may lead to various biological dysfunctions. These aggregated intermediates and fibers are presumed to be associated with some neurodegenerative diseases and other disorders, such as Alzheimer's disease (AD), Parkinson's disease (PD), diabetes type II (diabetes type II) )Wait. Numerous studies have demonstrated that the more toxic fractions are oligomers or fibrillar intermediates, and mature fibers may also play an important role. The development of effective amyloid aggregation inhibitors has become one of the effective means in the field of drug development for the treatment of these diseases. Therefore, sensitive and convincing methods for the detection of amyloid fibrils or intermediates and detailed understanding of the fibril formation mechanism at the molecular level are required. This knowledge can help rationalize the design of therapeutic regimens to prevent and slow down the damage to the body caused by toxic amyloid fragments. In recent years, some breakthroughs have been made in the research on the structure, morphology, and full length of amyloid fibrils. However, the molecular-level aggregation mechanism of amyloid misfolding remains unexplored.
目前淀粉样蛋白聚集抑制剂筛选方法主要包括以下三个方面:(1)体外染料实验筛选。淀粉样染料例如硫黄素T(Thioflavin T,ThT)和刚果红(Congo red,CR)在疏水性环境中较敏感,当结合到淀粉样纤维的β-折叠结构时能发荧光,因此广泛用于聚集性蛋白的研究和高通量筛选及鉴定聚集抑制剂中。然而,这些染料的应用存在很多局限性,例如,利用这些染料不能检测早期聚集体的形态,同时由于小分子药物可能与这些染料竞争性地结合至淀粉样纤维上,因此不能用于精确探索小分子药物引起的纤维形态学变化。另外,染料的性质可能受缓冲溶液中其他成分的影响,因此易产生一些假阳性等。(2)荧光蛋白标记筛选。为形象化聚集过程,绿色荧光蛋白GFP与β-淀粉样蛋白42(Aβ42)形成融合蛋白获得表达,并用于筛选Aβ42聚集抑制剂。然而,由于GFP的分子量较大,只有4.5kDa的Aβ42蛋白聚集和折叠很难较好地导致整个融合蛋白错误折叠,因此GFP-Aβ42融合蛋白的聚集折叠过程可能并非完全为Aβ42的聚集过程。另外,染料和荧光蛋白的背景荧光可能对检测结果造成较大的影响。(3)分子设计和虚拟筛选。随着近年来分子模拟技术的高速发展,分子模拟技术,如分子动力学模拟、分子对接和药效团模型等,已广泛应用于解析淀粉样蛋白聚集和错误折叠及其抑制的作用机理、计算抑制剂与淀粉样蛋白之间结合作用力类型、确定抑制剂的作用位点以及筛选和设计聚集抑制剂。然而由于淀粉样蛋白聚集体的构象不稳定,尤其是一些毒性最强的寡聚体三维结构至今未解析,严重制约了分子模拟技术在淀粉样蛋白聚集抑制剂开发中的应用。At present, the screening methods of amyloid aggregation inhibitors mainly include the following three aspects: (1) In vitro dye experiment screening. Amyloid dyes such as Thioflavin T (ThT) and Congo red (CR) are sensitive in a hydrophobic environment and fluoresce when bound to the β-sheet structure of amyloid fibrils, and are therefore widely used. Aggregated protein research and high-throughput screening and identification of aggregation inhibitors. However, the application of these dyes has many limitations. For example, the morphology of early aggregates cannot be detected with these dyes, and they cannot be used to accurately explore small molecules because small-molecule drugs may compete with these dyes for binding to amyloid fibrils. Morphological changes in fibers induced by molecular drugs. In addition, the properties of the dye may be affected by other components in the buffer solution, so it is prone to some false positives, etc. (2) Fluorescent protein labeling screening. To visualize the aggregation process, green fluorescent protein GFP was expressed as a fusion protein with β-amyloid 42 (Aβ42) and used to screen for Aβ42 aggregation inhibitors. However, due to the large molecular weight of GFP, the aggregation and folding of only 4.5kDa Aβ42 protein is difficult to cause the misfolding of the entire fusion protein. Therefore, the aggregation and folding process of GFP-Aβ42 fusion protein may not be completely the aggregation process of Aβ42. In addition, the background fluorescence of dyes and fluorescent proteins may greatly affect the detection results. (3) Molecular design and virtual screening. With the rapid development of molecular simulation technology in recent years, molecular simulation techniques, such as molecular dynamics simulation, molecular docking and pharmacophore modeling, have been widely used to analyze the mechanism of amyloid aggregation and misfolding and its inhibition, computational Types of binding forces between inhibitors and amyloid, determination of inhibitor sites, and screening and design of aggregation inhibitors. However, due to the unstable conformation of amyloid aggregates, especially the three-dimensional structures of some of the most toxic oligomers have not yet been resolved, the application of molecular modeling technology in the development of amyloid aggregation inhibitors has been severely restricted.
聚集诱导发光(Aggregation-Induced Emission,AIE)探针具有在游离状态下不发荧光,形成聚集体或构象收到限制时能发较强荧光的特性,因此可作为分析环境和构象变化的最佳生物传感器。其聚集诱导发光原理可能为探针分子内旋转受环境的限制,出现一个局部激发态,由此产生一种非正常的光物理效应。这种构象转换依赖型发光现象不受背景荧光的干扰,使其可应用于淀粉样蛋白的生物动力学研究。最近几年已有几种AIE分子被报道用于检测和鉴定淀粉样纤维和探索蛋白与蛋白之前的关系,包括TPE、TPE-TPP、BSPOTPE、EPB等。然而不完美的是,这些AIE分子在应用的过程中都存在灵敏度和特异性不强等缺点。Aggregation-Induced Emission (AIE) probes have the characteristics of not fluorescing in the free state, but can fluoresce strongly when aggregates are formed or when their conformation is restricted, so they can be used as the best choice for analyzing environmental and conformational changes. biological sensor. The principle of aggregation-induced luminescence may be that the intramolecular rotation of the probe is restricted by the environment, resulting in a local excited state, which produces an abnormal photophysical effect. This conformation-switch-dependent luminescence phenomenon is not disturbed by background fluorescence, making it applicable to the biodynamic studies of amyloid. In recent years, several AIE molecules have been reported to detect and identify amyloid fibrils and explore the relationship between proteins and proteins, including TPE, TPE-TPP, BSPOTPE, EPB, etc. However, imperfectly, these AIE molecules have shortcomings such as weak sensitivity and specificity in the process of application.
为解决目前淀粉样蛋白聚集抑制剂筛选中的问题,本发明结合聚集诱导发光技术,在α-突触核蛋白(α-synuclein,αSN)中引入非天然氨基酸(Unnatural Amino Acid,UAA),然后利用其侧链上的叠氮基与AIE分子通过生物正交反应偶联,定点在αSN上进行AIE分子的标记,从而提高AIE应用于检测蛋白构象转换的特异性和灵敏性,获得AIE-mutαSN生物传感器并应用于淀粉样蛋白聚集抑制剂的筛选中。In order to solve the problem in the current screening of amyloid aggregation inhibitors, the present invention combines the aggregation-induced luminescence technology to introduce unnatural amino acids (Unnatural Amino Acid, UAA) into α-synuclein (α-synuclein, αSN), and then The azide group on its side chain is coupled with the AIE molecule through a bioorthogonal reaction, and the labeling of the AIE molecule is carried out on the αSN, thereby improving the specificity and sensitivity of AIE for detecting protein conformational transition, and obtaining AIE-mutαSN Biosensor and application in the screening of amyloid aggregation inhibitors.
发明内容:Invention content:
为了实现上述目的,本发明结合非天然氨基酸生物表达和生物正交反应技术,构建了一种αSN聚集诱导发光体系,并将其应用于αSN聚集抑制剂的筛选中。In order to achieve the above purpose, the present invention combines the biological expression of unnatural amino acids and the bioorthogonal reaction technology to construct an αSN aggregation-induced luminescence system, which is applied to the screening of αSN aggregation inhibitors.
本发明提供的技术方案之一,是一种αSN聚集诱导发光融合体,所述αSN聚集诱导发光融合体具体为EPB-αSN4F或EPB-αSN39Y,是将αSN氨基酸序列中第4位的苯丙氨酸或第39位的酪氨酸替换为对叠氮基苯丙氨酸(p-Azido-L-phenylalanine,pAZF),获得αSN4F或αSN39Y突变体蛋白,再将AIE分子EPB与突变体蛋白αSN4F或αSN39Y进行生物正交连接反应,获得EPB-αSN4F或EPB-αSN39Y。One of the technical solutions provided by the present invention is an αSN aggregation-induced luminescence fusion. The αSN aggregation-induced luminescence fusion is specifically EPB-αSN4F or EPB-αSN39Y, which is a combination of phenylalanine at position 4 in the αSN amino acid sequence. Acid or tyrosine at position 39 was replaced by p-Azido-L-phenylalanine (pAZF) to obtain αSN4F or αSN39Y mutant protein, and then AIE molecule EPB was combined with mutant protein αSN4F or αSN39Y was subjected to a bioorthogonal ligation reaction to obtain EPB-αSN4F or EPB-αSN39Y.
所述αSN氨基酸序列如序列表SEQ ID NO.2所示。The amino acid sequence of αSN is shown in SEQ ID NO. 2 of the sequence listing.
所述AIE分子EPB的化学式为:C38H44N2O2Br2,结构式如图1-a所示。The chemical formula of the AIE molecule EPB is: C 38 H 44 N 2 O 2 Br 2 , and the structural formula is shown in Figure 1-a.
本发明还提供EPB-αSN4F或EPB-αSN39Y的构建方法,具体如下:The present invention also provides a construction method of EPB-αSN4F or EPB-αSN39Y, which is specifically as follows:
(1)通过基因合成或PCR的方法,获得将pAZF替换αSN3中4位的苯丙氨酸或第39位的酪氨酸的蛋白表达基因,并通过大肠杆菌表达的方法获得αSN4F或αSN39Y突变体蛋白;(1) Obtain a protein expression gene by replacing pAZF with phenylalanine at position 4 or tyrosine at position 39 in αSN3 by gene synthesis or PCR, and obtain αSN4F or αSN39Y mutant by expression in E. coli protein;
(2)利用铜催化叠氮端炔环加成反应(CuAAC)将EPB与UAA突变体蛋白αSN4F或αSN39Y进行生物正交连接反应,获得EPB-αSN4F或EPB-αSN39Y。(2) The copper-catalyzed azide-terminal alkyne cycloaddition reaction (CuAAC) was used to bioorthogonally link EPB with UAA mutant protein αSN4F or αSN39Y to obtain EPB-αSN4F or EPB-αSN39Y.
本发明还提供EPB-αSN4F或EPB-αSN39Y在αSN聚集抑制剂筛选中的应用,方法如下:在EPB-αSN4F或EPB-αSN39Y溶液(PBS溶解)中加入潜在抑制剂,激发波长350nm,发射波长380nm-600nm范围内检测荧光强度,若荧光强度弱于不存在潜在抑制剂的EPB-αSN4F或EPB-αSN39Y体系,则判断所述潜在抑制剂为αSN聚集抑制剂。The present invention also provides the application of EPB-αSN4F or EPB-αSN39Y in the screening of αSN aggregation inhibitors. The fluorescence intensity was detected within the range of -600 nm, and if the fluorescence intensity was weaker than that of the EPB-αSN4F or EPB-αSN39Y system without the potential inhibitor, the potential inhibitor was determined to be an αSN aggregation inhibitor.
当EPB-αSN4F或EPB-αSN39Y溶液中存在抑制剂时,可抑制αSN4F或αSN39Y聚集,导致该筛选体系不发光或发光较弱;而当溶液中不含抑制剂时,αSN4F或αSN39Y迅速聚集,使得筛选体系能发出较强荧光;When there is an inhibitor in EPB-αSN4F or EPB-αSN39Y solution, it can inhibit the aggregation of αSN4F or αSN39Y, resulting in no or weak luminescence of the screening system. The screening system can emit strong fluorescence;
优选地,EPB-αSN4F或EPB-αSN39Y浓度为20μM,激发波长350nm,发射波长380nm-600nm范围内检测荧光强度,优选发射波长490nm。Preferably, the concentration of EPB-αSN4F or EPB-αSN39Y is 20 μM, the excitation wavelength is 350 nm, and the fluorescence intensity is detected within the range of emission wavelength 380 nm-600 nm, preferably emission wavelength 490 nm.
有益效果:Beneficial effects:
EPB并不能随着αSN的聚集而产生荧光,即EPB不能单独用于αSN聚集特性的研究;经过pAzF突变的αSN在聚集的过程中无法使EPB聚合产生荧光;而本发明构建的EPB-αSN4F或EPB-αSN39Y在形成聚集体时能够诱导体系发出较强的荧光,从而为αSN聚集抑制剂的筛选提供新的方法思路。EPB cannot generate fluorescence with the aggregation of αSN, that is, EPB cannot be used alone to study the aggregation characteristics of αSN; αSN mutated by pAzF cannot make EPB aggregate to generate fluorescence during the aggregation process; EPB-αSN4F or EPB-αSN4F constructed in the present invention or EPB-αSN39Y can induce the system to emit strong fluorescence when forming aggregates, thus providing a new method for the screening of αSN aggregation inhibitors.
附图说明:Description of drawings:
图1EPB分子结构及其聚集诱导发光特性验证Fig.1 EPB molecular structure and verification of aggregation-induced luminescence properties
其中,a.EPB分子结构;b.EPB在不同浓度甘油中荧光值变化;Among them, a. EPB molecular structure; b. EPB fluorescence value changes in different concentrations of glycerol;
图2αSN聚集诱导发光体系的构建流程图;Figure 2 The flow chart of the construction of the αSN aggregation-induced luminescence system;
图3αSN及6种UAA突变体蛋白表达纯化及聚集特性研究Figure 3. Protein expression, purification and aggregation properties of αSN and six UAA mutants
其中,a.非天然氨基酸pAzF结构及替换原则;b.αSN蛋白中pAzF替换位点;c.pET22b-αSN/mutαSN表达载体示意图;d.SDS-PAGE凝胶电泳检测αSN及其6个pAzF突变体蛋白;Among them, a. structure and replacement principle of unnatural amino acid pAzF; b. pAzF replacement site in αSN protein; c. schematic diagram of pET22b-αSN/mutαSN expression vector; d. SDS-PAGE gel electrophoresis to detect αSN and its six pAzF mutations somatic protein;
图4MALDI TOF质谱鉴定αSN及其6个pAzF突变体蛋白Figure 4 Identification of αSN and its six pAzF mutant proteins by MALDI TOF mass spectrometry
其中,a-g分别为:αSN、αSN4F、αSN39Y、αSN94F、αSN125Y、αSN133Y、αSN136Y;Wherein, a-g are respectively: αSN, αSN4F, αSN39Y, αSN94F, αSN125Y, αSN133Y, αSN136Y;
图5ThT荧光染色检测αSN及其6个pAzF突变体蛋白聚集特性;Figure 5. ThT fluorescent staining to detect the aggregation properties of αSN and its six pAzF mutants;
图6EPB-αSN4F/39Y体系构建及验证Figure 6 Construction and verification of EPB-αSN4F/39Y system
其中,a.利用CuAAC将EPB连接至αSN4F/39Y上,构建EPB-αSN4F/39Y;b,c.UV-可见分光全波长扫描验证EPB-αSN4F和EPB-αSN39Y是否构建成功,扫描波长范围为200-600nm;Among them, a. Using CuAAC to connect EPB to αSN4F/39Y to construct EPB-αSN4F/39Y; b, c. UV-visible spectroscopy full wavelength scan to verify whether EPB-αSN4F and EPB-αSN39Y were successfully constructed, the scanning wavelength range is 200 -600nm;
图7EPB-αSN4F/39Y聚集诱导发光体系的应用其中,(a)EPB-αSN4F;(b)EPB-αSN39Y体系;Figure 7 Application of EPB-αSN4F/39Y aggregation-induced luminescence system wherein, (a) EPB-αSN4F; (b) EPB-αSN39Y system;
图8不同发光体系的聚集特性Figure 8 Aggregation characteristics of different luminescent systems
其中,a为αSN4F相关体系;b为αSN39Y相关体系。Among them, a is the αSN4F-related system; b is the αSN39Y-related system.
具体实施方式:Detailed ways:
为了使本专利的目的、技术方案及优点更加清楚明白,以下结合具体实施例,对本专利进行进一步详细说明。应当理解,此处所描述的具体实施例仅仅用以解释本专利,并不用于限定本发明。In order to make the purpose, technical solutions and advantages of the present patent more clear, the present patent will be further described in detail below with reference to specific embodiments. It should be understood that the specific embodiments described herein are only used to explain the present patent, but not to limit the present invention.
本发明使用限制性内切酶及DNA聚合酶购自大连宝生物工程有限公司,小量质粒提取试剂盒、DNA胶回收试剂盒、DNA纯化回收试剂盒购自Omega bio-tech,Ni+树脂购自sigma公司,非天然氨基酸pAzF购自MCE公司,其他试剂未特别注明来源的,均购自上海源叶生物科技有限公司。基因及引物合成来自于苏州金唯智生物科技有限公司。聚集诱导发光分子EPB委托化学合成公式进行合成。实验操作中未详述的,均根据实验室手册——如《分子克隆》进行操作。In the present invention, restriction endonuclease and DNA polymerase were purchased from Dalian Bao Bioengineering Co., Ltd., a small amount of plasmid extraction kit, DNA gel recovery kit, and DNA purification recovery kit were purchased from Omega bio-tech, and Ni + resin was purchased from Omega bio-tech. The non-natural amino acid pAzF was purchased from Sigma Company, and the unnatural amino acid pAzF was purchased from MCE Company. Other reagents without special source were purchased from Shanghai Yuanye Biotechnology Co., Ltd. Gene and primer synthesis were obtained from Suzhou Jinweizhi Biotechnology Co., Ltd. The aggregation-induced luminescent molecule EPB was synthesized by entrusting a chemical synthesis formula. If the experimental operation is not described in detail, the operation is carried out according to the laboratory manual - such as "Molecular Cloning".
四苯乙烯及其衍生物因其合成简单、易于修饰等特点,是目前研究最为深入的AIE分子。EPB分子即为一种四苯乙烯的衍生物。Tetrastyrene and its derivatives are the most deeply studied AIE molecules due to their simple synthesis and easy modification. The EPB molecule is a derivative of tetraphenylene.
本发明选择的AIE分子为EPB,全称2,20-(((2-(4-ethynylphenyl)-2-phenylethene-1,1-diyl)bis(4,1-phenylene))bis(oxy))bis-(N,N,N-trimethylethanaminium)bromide,该分子是四苯乙烯的衍生物,具有较好的聚集诱导发光特性,已公开于Hu,R.;Yap,H.K.;Fung,Y.H.;Wang,Y.;Cheong,W.L.;So,L.Y.;Tsang,C.S.;Lee,L.Y.;Lo,W.K.;Yuan,J.;Sun,N.;Leung,Y.C.;Yang,G.;Wong,K.Y.,'Light up'protein-protein interaction through bioorthogonal incorporation of a turn-onfluorescent probe into beta-lactamase.Mol.Biosyst.2016,12(12),3544-3549。本领域技术人员可根据上述文献或结构式、化学式等相关信息对EPB进行合成。The AIE molecule selected in the present invention is EPB, the full name is 2,20-(((2-(4-ethynylphenyl)-2-phenylethene-1,1-diyl)bis(4,1-phenylene))bis(oxy))bis -(N,N,N-trimethylethanaminium)bromide, the molecule is a derivative of tetraphenylene with good aggregation-induced luminescence properties, which have been published in Hu, R.; Yap, H.K.; Fung, Y.H.; Wang, Y .;Cheong,W.L.;So,L.Y.;Tsang,C.S.;Lee,L.Y.;Lo,W.K.;Yuan,J.;Sun,N.;Leung,Y.C.;Yang,G.;Wong,K.Y.,'Light up'protein -protein interaction through bioorthogonal incorporation of a turn-onfluorescent probe into beta-lactamase. Mol. Biosyst. 2016, 12(12), 3544-3549. Those skilled in the art can synthesize EPB according to the above documents or relevant information such as structural formula and chemical formula.
本发明选择的非天然氨基酸为一种含有叠氮基的苯丙氨酸结构类似物,对叠氮基苯丙氨酸(p-Azido-L-phenylalanine,pAZF)。为减小由于UAA的替换对蛋白本身聚集特性产生影响,根据结构类似性原则,选择αSN中的苯丙氨酸(4和94位)和酪氨酸(39、125、133和136位)作为pAzF的替换位点。经大肠杆菌表达纯化获得6种pAzF突变的αSN异构体蛋白。经ThT荧光染色分析突变体的聚集特性,结果显示αSN4F及αSN39Y的聚集性受pAzF引入的影响较小,因此选择αSN4F或αSN39Y突变体蛋白进行后续的实验。The unnatural amino acid selected in the present invention is a phenylalanine structural analog containing an azide group, p-Azido-L-phenylalanine (pAZF). In order to reduce the effect of the substitution of UAA on the aggregation properties of the protein itself, according to the principle of structural similarity, phenylalanine (positions 4 and 94) and tyrosine (positions 39, 125, 133 and 136) in αSN were selected as Replacement site for pAzF. Six kinds of pAzF mutant αSN isoform proteins were obtained by expression and purification in E. coli. The aggregation properties of the mutants were analyzed by ThT fluorescence staining, and the results showed that the aggregation of αSN4F and αSN39Y was less affected by the introduction of pAzF, so αSN4F or αSN39Y mutant proteins were selected for subsequent experiments.
以下将通过具体实施例对本发明做进一步的解释说明。其中αSN聚集诱导发光筛选体系构建流程如图2所示。The present invention will be further explained and illustrated by specific embodiments below. The construction flow of the αSN aggregation-induced luminescence screening system is shown in Figure 2.
实施例1:聚集诱导发光分子的选择及发光特性鉴定Example 1: Selection of aggregation-induced luminescent molecules and identification of luminescent properties
聚集诱导发光分子EPB为一种四苯乙烯的衍生物,结构式如图1-a所示。为验证该AIE分子的聚集诱导特性,取相同浓度EPB(2μM)分别检测其在不同浓度甘油中荧光值变化,甘油浓度分别为0%、20%、40%、60%、70%,缓冲液为PBS,pH 7.4。充分混匀后在激发波长350nm,发射波长460nm条件下检测发荧光情况。The aggregation-induced luminescent molecule EPB is a derivative of tetraphenylene, and its structural formula is shown in Figure 1-a. In order to verify the aggregation-inducing properties of the AIE molecule, the same concentration of EPB (2 μM) was used to detect the change of its fluorescence value in different concentrations of glycerol. as PBS, pH 7.4. After thorough mixing, the fluorescence was detected under the conditions of excitation wavelength of 350 nm and emission wavelength of 460 nm.
实验结果如图1-b所示,EPB溶液荧光强度随甘油浓度的增加而逐渐增加,证明其确实具有聚集诱导发光的特性。The experimental results are shown in Figure 1-b, the fluorescence intensity of EPB solution gradually increased with the increase of glycerol concentration, which proved that it indeed has the characteristics of aggregation-induced luminescence.
实施例2:含非天然氨基酸pAzF的αSN异构体的表达纯化Example 2: Expression and purification of αSN isoforms containing unnatural amino acid pAzF
(1)选择αSN中的苯丙氨酸(4和94位)和酪氨酸(39、125、133和136位)作为pAzF的替换位点,通过基因合成或PCR的方法获得第4或94位苯丙氨酸、第9、125、133或136位酪氨酸替换为pAzF的αSN4F、αSN39Y、αSN94F、αSN125Y、αSN133Y、αSN136Y的编码基因(替换原则及替换位点如图3-a,3-b所示);(1) Select phenylalanine (positions 4 and 94) and tyrosine (positions 39, 125, 133 and 136) in αSN as the replacement sites of pAzF, and obtain the 4th or 94th by gene synthesis or PCR The coding genes of αSN4F, αSN39Y, αSN94F, αSN125Y, αSN133Y, αSN136Y in which the phenylalanine, 9, 125, 133 or 136 tyrosine of pAzF are replaced (replacement principle and replacement site are shown in Figure 3-a, 3 -b);
编码αSN蛋白基因经密码子优化后由金唯智公司合成,基因序列如SEQ ID No.1所示,αSN125Y琥珀突变体基因同样通过基因公司合成,其他5个琥珀突变体基因通过以野生型基因为模板,经PCR或重叠PCR的方法获得,所用引物如SEQ ID No.3-No.11所示。The gene encoding the αSN protein was synthesized by Jinweizhi Company after codon optimization. The gene sequence is shown in SEQ ID No. 1. The αSN125Y amber mutant gene was also synthesized by the gene company, and the other five amber mutant genes were synthesized by using the wild-type gene as The template is obtained by PCR or overlapping PCR, and the primers used are shown in SEQ ID No.3-No.11.
其中,克隆αSN4F基因引物为NdeI-4αSN-F/XhoI-αSN-R。The primers for cloning αSN4F gene were NdeI-4αSN-F/XhoI-αSN-R.
克隆αSN39Y基因时,首先利用引物NdeI-αSN-F/39TAG-R克隆左臂片段,利用引物39TAG-F/XhoI-αSN-R克隆右臂片段,然后以左右臂片段混合物为模板,利用引物NdeI-αSN-F/XhoI-αSN-R克隆αSN39Y基因。When cloning the αSN39Y gene, first use the primer NdeI-αSN-F/39TAG-R to clone the left arm fragment, use the primer 39TAG-F/XhoI-αSN-R to clone the right arm fragment, and then use the left and right arm fragment mixture as a template, use the primer NdeI - αSN-F/XhoI-αSN-R clone αSN39Y gene.
克隆αSN94F基因时,首先利用引物NdeI-αSN-F/94TAG-R克隆左臂片段,利用引物94TAG-F/XhoI-αSN-R克隆右臂片段,然后以左右臂片段混合物为模板,利用引物NdeI-αSN-F/XhoI-αSN-R克隆αSN94Y基因。When cloning the αSN94F gene, first use the primer NdeI-αSN-F/94TAG-R to clone the left arm fragment, use the primer 94TAG-F/XhoI-αSN-R to clone the right arm fragment, and then use the left and right arm fragment mixture as a template, use the primer NdeI - αSN-F/XhoI-αSN-R clone αSN94Y gene.
克隆αSN133Y基因引物为NdeI-αSN-F/133TAG-R。The primer of the cloned αSN133Y gene was NdeI-αSN-F/133TAG-R.
克隆αSN136Y基因引物为NdeI-αSN-F/136TAG-R。The primer of the cloned αSN136Y gene was NdeI-αSN-F/136TAG-R.
NdeI-αSN-F:GGAATTCCATATG GATGTGTTTATGAAAGGCCT(SEQ ID No.3);NdeI-αSN-F: GGAATTCCATATG GATGTGTTTATGAAAGGCCT (SEQ ID No. 3);
XhoI-αSN-R:CCGCTCGAG GGCTTCCGGTTCATAATCCT(SEQ ID No.4);XhoI-αSN-R: CCGCTCGAG GGCTTCCGGTTCATAATCCT (SEQ ID No. 4);
NdeI-4αSN-F:GGAATTCCATATGGATGTGTAGATGAAAGGCCT(SEQ ID No.5);NdeI-4αSN-F: GGAATTCCATATGGATGTGTAGATGAAAGGCCT (SEQ ID No. 5);
39TAG-R:TTGCTACCCACCTACAGCACGCCCT(SEQ ID No.6);39TAG-R: TTGCTACCCACCTACAGCACGCCCT (SEQ ID No. 6);
39TAG-F:AGGGCGTGCTGTAGGTGGGTAGCAA(SEQ ID No.7);39TAG-F: AGGGCGTGCTGTAGGTGGGTAGCAA (SEQ ID No. 7);
94TAG-R:CTTTCTTCACCTAACCGGTGGCG(SEQ ID No.8);94TAG-R: CTTTCTTCACCTAACCGGTGGCG (SEQ ID No. 8);
94TAG-F:CGCCACCGGTTAGGTGAAGAAAG(SEQ ID No.9);94TAG-F: CGCCACCGGTTAGGTGAAGAAAG (SEQ ID No. 9);
133TAG-R:CCGCTCGAGGGCTTCCGGTTCATAATCCTGCTAGCCAA(SEQ ID No.10);133TAG-R: CCGCTCGAGGGCTTCCGGTTCATAATCCTGCTAGCCAA (SEQ ID No. 10);
136TAG-R:CCGCTCGAGGGCTTCCGGTTCCTAATCCTGGTAGCC(SEQ ID No.11)。136TAG-R: CCGCTCGAGGGCTTCCGGTTCCTAATCCTGGTAGCC (SEQ ID No. 11).
(2)为便于后期UAA突变体蛋白的筛选纯化,选择pET22b质粒作为表达载体。(2) In order to facilitate the screening and purification of the UAA mutant protein in the later stage, the pET22b plasmid was selected as the expression vector.
(3)利用常规大肠杆菌化学转化方法,构建了野生型αSN及6个突变体蛋白在大肠杆菌中表达的表达载体,表达载体示意图如图3-c所示。(3) An expression vector for expressing wild-type αSN and 6 mutant proteins in E. coli was constructed using the conventional chemical transformation method of E. coli. The schematic diagram of the expression vector is shown in Figure 3-c.
对于野生型αSN蛋白,将pET22b-αSN表达载体转化至大肠杆菌BL21表达宿主,构建相应重组菌株BL21-αSN。挑取构建好的BL21-αSN工程菌单菌落至5mL LB培养基中过夜37℃培养,按1%接种量转接新鲜LB培养基中,37℃培养至OD600为0.6-0.8,加入终浓度0.5mMIPTG诱导,诱导温度为16℃,诱导时间16-18h。最终6000rpm离心10min收集菌体。用缓冲液lysisbuffer(20mMTris-HCl,pH 7.4,200mMNaCl,1mM EDTA,1mM DTT)将上述所得菌体重悬,加入终浓度30μg/mL的溶菌酶和1%PMSF,冰浴30min后超声破碎,12000rpm离心40min,收集上清。将上清加入到直链淀粉树脂亲和层析柱,再用10个柱体积的wash buffer(20mMTris-HCl,pH 7.4,200mMNaCl,1mM EDTA,1mM DTT,2mM麦芽糖)洗涤柱子,最后用10个柱体积的elution buffer(20mMTris-HCl,pH 7.4,200mMNaCl,1mM EDTA,1mM DTT,10mM麦芽糖)缓冲液洗脱。经Nanodrop 2000测定蛋白浓度,计算每升菌液可纯化获得得35.5mg野生型αSN蛋白。For the wild-type αSN protein, the pET22b-αSN expression vector was transformed into the E. coli BL21 expression host to construct the corresponding recombinant strain BL21-αSN. Pick a single colony of the constructed BL21-αSN engineering bacteria into 5mL LB medium for overnight culture at 37°C, transfer to fresh LB medium at 1% inoculum, and culture at 37°C until the OD600 is 0.6-0.8, and add a final concentration of 0.5 Induction by mMIPTG, the induction temperature was 16 °C, and the induction time was 16-18 h. Finally, the cells were collected by centrifugation at 6000 rpm for 10 min. The bacteria obtained above were resuspended with a buffer lysisbuffer (20mM Tris-HCl, pH 7.4, 200mMNaCl, 1mM EDTA, 1mM DTT), added with a final concentration of 30 μg/mL lysozyme and 1% PMSF, sonicated on ice for 30 min, and centrifuged at 12,000 rpm. After 40 min, the supernatant was collected. The supernatant was added to the amylose resin affinity chromatography column, and the column was washed with 10 column volumes of wash buffer (20 mM Tris-HCl, pH 7.4, 200 mM NaCl, 1 mM EDTA, 1 mM DTT, 2 mM maltose), and finally 10 A column volume of elution buffer (20 mM Tris-HCl, pH 7.4, 200 mM NaCl, 1 mM EDTA, 1 mM DTT, 10 mM maltose) buffer was used for elution. The protein concentration was determined by Nanodrop 2000, and it was calculated that 35.5 mg of wild-type αSN protein could be obtained per liter of bacterial solution.
对于pAzF突变体蛋白的表达,将辅助质粒pEVOL-pAzF与表达载体质粒pET22b-mutαSN(mutαSN分别为6个突变体蛋白编码基因,pET22b-mutαSN代表负载αSN突变体蛋白编码基因pET22b表达载体)共转化同一大肠杆菌BL21感受态细胞,构建相应重组菌株BL21-mutαSN。挑取构上述工程菌单菌落至5mL LB培养基中37℃过夜培养,按1%接种量转接新鲜LB培养基中,37℃培养至OD600为0.3,加入终浓度1mM pAzF。继续置于37℃摇床中培养,OD600至0.5时,加入终浓度0.2%(w/v)L-阿拉伯糖,置于30℃摇床中培养至OD600为1时,加入终浓度0.5mM IPTG诱导,诱导温度为30℃,诱导时间16-18h。最终6000rpm离心10min收集菌体。与上述蛋白纯化方法一致,经Ni柱亲和层析纯化获得6种pAzF突变体蛋白,SDS-PAGE电泳图如图3-d所示,图中可以看出,蛋白纯度达95%以上,经Nanodrop 2000检测蛋白浓度,计算这6种突变体蛋白αSN4F、αSN39Y、αSN94F、αSN125Y、αSN133Y、αSN136Y产量分别约为7.5mg/L、13.7mg/L、8.3mg/L、8.8mg/L、9.1mg/L、7.8mg/L。上述蛋白经透析脱盐后冻干处理,置于-20℃备用。For the expression of pAzF mutant protein, the helper plasmid pEVOL-pAzF was co-transformed with the expression vector plasmid pET22b-mutαSN (mutαSN are 6 mutant protein encoding genes, pET22b-mutαSN represents the pET22b expression vector carrying the αSN mutant protein encoding gene) The same E. coli BL21 competent cells were used to construct the corresponding recombinant strain BL21-mutαSN. Pick a single colony of the above-mentioned engineered bacteria to 5mL LB medium for overnight culture at 37°C, transfer to fresh LB medium at 1% inoculum size, cultivate at 37°C to OD600 of 0.3, and add a final concentration of 1mM pAzF. Continue to be cultured in a shaker at 37°C, when the OD600 reaches 0.5, add a final concentration of 0.2% (w/v) L-arabinose, and place it in a shaker at 30°C to culture until the OD600 is 1, add a final concentration of 0.5mM IPTG Induction, the induction temperature was 30 °C, and the induction time was 16-18 h. Finally, the cells were collected by centrifugation at 6000 rpm for 10 min. Consistent with the above-mentioned protein purification method, 6 kinds of pAzF mutant proteins were obtained by Ni-column affinity chromatography. The protein concentration was detected by Nanodrop 2000, and the yields of the six mutant proteins αSN4F, αSN39Y, αSN94F, αSN125Y, αSN133Y, and αSN136Y were calculated to be approximately 7.5 mg/L, 13.7 mg/L, 8.3 mg/L, 8.8 mg/L, and 9.1 mg, respectively. /L, 7.8mg/L. The above proteins were lyophilized after desalting by dialysis, and placed at -20°C for later use.
利用MALDI TOF质谱检测进一步验证所得蛋白为目标蛋白,质谱图如图4所示。MALDI TOF mass spectrometry was used to further verify that the obtained protein was the target protein, and the mass spectrogram is shown in Figure 4.
实施例3:ThT荧光染色检测突变体蛋白聚集特性Example 3: ThT fluorescent staining to detect the aggregation properties of mutant proteins
采用非原位培养法进行检测,取上述六种突变体蛋白及αSN分别配成等浓度蛋白溶液,浓度为100μM,置于37℃,180rpm震荡培养。定点时间取样,取样体积为10μL,加入90μL250μM ThT溶液,充分混匀后在激发波长440nm,发射波长480nm条件下检测荧光强度。检测结果如图5所示,图中可以看出,随培养时间的增加,野生型αSN荧光强度逐渐增强,12h后基本进入稳定期;6种突变体蛋白中,αSN4F、αSN39Y荧光强度也随时间增加而增强,24h后基本进入稳定期;其他4种突变体蛋白荧光强度一直较低。以上结果证明:pAzF引入到4位、39位时,对蛋白本身聚集性影响较小,替换其他4种位置氨基酸时,该蛋白基本丧失聚集性,因此选择αSN4F、αSN39Y两种突变体蛋白进行后续的实验。The ex-situ culture method was used for detection. The above-mentioned six mutant proteins and αSN were respectively prepared into equal concentration protein solutions with a concentration of 100 μM, placed at 37° C. and incubated with shaking at 180 rpm. Sampling at a fixed time, the sampling volume is 10 μL, 90 μL of 250 μM ThT solution is added, and the fluorescence intensity is detected under the conditions of excitation wavelength 440 nm and emission wavelength 480 nm after thorough mixing. The detection results are shown in Figure 5. It can be seen from the figure that with the increase of culture time, the fluorescence intensity of wild-type αSN gradually increased, and basically entered a stable phase after 12 hours; among the six mutant proteins, the fluorescence intensity of αSN4F and αSN39Y also increased with time. The fluorescence intensity of the other four mutant proteins was always low. The above results prove that when pAzF is introduced into positions 4 and 39, it has little effect on the aggregation of the protein itself. When the amino acids at the other 4 positions are replaced, the protein basically loses the aggregation. Therefore, two mutant proteins, αSN4F and αSN39Y, were selected for follow-up. experiment of.
上述蛋白及ThT缓冲液采用TBS缓冲液,pH为5.0。The above protein and ThT buffer were TBS buffer, pH 5.0.
实施例4:EPB-αSN4F/αSN39Y体系的构建Example 4: Construction of EPB-αSN4F/αSN39Y system
本发明采用铜催化叠氮端炔环加成反应(CuAAC)将EPB与αSN4F或αSN39Y连接,构建EPB-αSN4F或EPB-αSN39Y体系,如图6-a所示。1mL反应体系,反应条件及所用试剂添加量如下:The present invention adopts copper-catalyzed azide-terminal alkyne cycloaddition reaction (CuAAC) to connect EPB with αSN4F or αSN39Y to construct an EPB-αSN4F or EPB-αSN39Y system, as shown in Figure 6-a. 1mL reaction system, reaction conditions and the amount of reagents used are as follows:
之后用PBS补足1mL。混合轻摇,4℃反应8h(上述缓冲液及试剂皆用PBS配制)。反应完成后,利用透析袋或者脱盐柱对反应体系进行脱盐,将多余的离子等去除,透析或脱盐的过程尽量保持低温进行。Then make up 1 mL with PBS. Mix and shake gently, and react at 4°C for 8 hours (the above buffers and reagents are all prepared with PBS). After the reaction is completed, the reaction system is desalted by using a dialysis bag or a desalting column to remove excess ions, etc., and the dialysis or desalination process should be kept as low as possible.
为验证上述体系是否构建成功,利用UV-可见光分光光度计在200-600nm波长范围内扫描的方法对比检测EPB标记前和标记后目标蛋白吸光度的变化,结果如图6-b,6-c所示。图中明显看出,EPB标记后的EPB-αSN4F或EPB-αSN39Y复合物在250–350nm波长范围内吸光度明显比未标记前αSN4F或αSN39Y的荧光值大,此现象是由于EPB上的π-π键导致吸光度的增强,证明EPB成功连接到αSN4F或αSN39Y上。In order to verify whether the above system was successfully constructed, the UV-Vis spectrophotometer was used to scan in the wavelength range of 200-600nm to compare and detect the changes in the absorbance of the target protein before and after EPB labeling. The results are shown in Figures 6-b and 6-c. Show. It is obvious from the figure that the absorbance of EPB-αSN4F or EPB-αSN39Y complexes after EPB labeling in the wavelength range of 250–350 nm is significantly larger than that of unlabeled αSN4F or αSN39Y. This phenomenon is due to the π-π on EPB. The bond resulted in an increase in absorbance, demonstrating the successful attachment of EPB to αSN4F or αSN39Y.
实施例5:EPB-αSN4F或EPB-αSN39Y体系的应用Example 5: Application of EPB-αSN4F or EPB-αSN39Y system
为鉴定该系统是否真正能应用于聚集抑制剂的筛选中,选择已知具有αSN聚集抑制作用的小分子抑制剂EGCG进行验证。In order to identify whether the system can really be used in the screening of aggregation inhibitors, EGCG, a small molecule inhibitor known to have αSN aggregation inhibitory effect, was selected for verification.
用PBS缓冲液将EGCG粉末配制成浓度为100μM储存液。取相同终浓度(20μM)的EGCG和EPB-αSN4F或EPB-αSN39Y溶液置于96孔细胞培养板中配成200μL体系。充分混匀后,利用荧光分光光度计进行扫描检测,检测条件为:激发波长350nm,发射波长380nm-600nm。并用同样终浓度的EPB-αSN4F或EPB-αSN39Y且不加EGCG的样品作为对照组。EGCG powder was formulated as a 100 [mu]M stock solution in PBS buffer. The same final concentration (20 μM) of EGCG and EPB-αSN4F or EPB-αSN39Y solution was placed in a 96-well cell culture plate to prepare a 200 μL system. After fully mixing, use a fluorescence spectrophotometer to scan and detect, and the detection conditions are: excitation wavelength 350nm, emission wavelength 380nm-600nm. The same final concentration of EPB-αSN4F or EPB-αSN39Y without EGCG was used as a control group.
实验结果如图7所示,EGCG溶液作为空白对照在该扫描范围内,尤其是450-550nm范围内的荧光值极低,而未加EGCG的EPB-αSN4F或EPB-αSN39Y溶液荧光值明显高于加入EGCG的样品。证明正是由于EGCG抑制了目标蛋白的聚集,使得该聚集诱导发光体系处于游离状态,因此荧光值较低,而不添加EGCG时,目标蛋白形成聚集体,最终诱导体系发出较强的荧光。另外分析结果显示,在该扫描范围内,发射波长为490nm时荧光值最高,可作为后期快速筛选小分子药物的检测条件。The experimental results are shown in Figure 7. As a blank control, the fluorescence value of EGCG solution in this scanning range, especially in the range of 450-550nm, is extremely low, while the fluorescence value of EPB-αSN4F or EPB-αSN39Y solution without EGCG is significantly higher than that of EPB-αSN4F solution without EGCG. Add samples of EGCG. It is proved that because EGCG inhibits the aggregation of the target protein, the aggregation-induced luminescence system is in a free state, so the fluorescence value is low. When EGCG is not added, the target protein forms aggregates and finally induces the system to emit strong fluorescence. In addition, the analysis results show that within this scanning range, the fluorescence value is the highest when the emission wavelength is 490 nm, which can be used as a detection condition for rapid screening of small molecule drugs in the later stage.
实施例6聚集特性的研究Example 6 Study of Aggregation Properties
(1)构建发光体系①αSN与EPB溶液等浓度充分混合,终浓度都为20μM;②αSN4F或αSN39Y与EPB等浓度充分混合,终浓度都为20μM;③20μM EPB-αSN4F或EPB-αSN39Y;(1) Construction of a luminescence system ① αSN and EPB solution were fully mixed at equal concentrations, and the final concentration was 20 μM; ② αSN4F or αSN39Y and EPB were fully mixed at equal concentrations, and the final concentration was 20 μM; ③ 20 μM EPB-αSN4F or EPB-αSN39Y;
(2)利用荧光分光光度计对上述体系分别进行扫描检测,检测条件为:激发波长350nm,发射波长380nm-600nm。(2) Scanning and detecting the above systems using a fluorescence spectrophotometer respectively, and the detection conditions are: excitation wavelength of 350 nm and emission wavelength of 380 nm-600 nm.
结果如图8所示,由图8可知EPB并不能随着αSN的聚集而产生荧光,即EPB不能单独用于αSN聚集特性的研究。经过pAzF突变的αSN在聚集的过程中同样无法使EPB聚合产生荧光,而本发明构建的EPB-αSN4F或EPB-αSN39Y在形成聚集体时能够诱导体系发出较强的荧光。The results are shown in FIG. 8 . It can be seen from FIG. 8 that EPB cannot generate fluorescence with the aggregation of αSN, that is, EPB cannot be used alone to study the aggregation properties of αSN. The αSN mutated by pAzF also cannot make EPB aggregate to generate fluorescence during the aggregation process, while the EPB-αSN4F or EPB-αSN39Y constructed in the present invention can induce the system to emit strong fluorescence when forming aggregates.
综上所述,本发明所构建的聚集诱导发光体系可应用于αSN聚集抑制剂的筛选中,当溶液中存在抑制剂时,可抑制αSN聚集,导致该传感器不发光;而当溶液中不含抑制剂时,αSN迅速聚集,使得传感器能发出较强荧光,利用荧光分光光度计即可检测,根据荧光强度来判定该小分子抑制剂的抑制效果。To sum up, the aggregation-induced luminescence system constructed in the present invention can be applied to the screening of αSN aggregation inhibitors. When the inhibitor exists in the solution, the αSN aggregation can be inhibited, resulting in the sensor not emitting light; When an inhibitor is present, αSN rapidly aggregates, so that the sensor can emit strong fluorescence, which can be detected by a fluorescence spectrophotometer, and the inhibitory effect of the small molecule inhibitor is determined according to the fluorescence intensity.
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