CN110343641A - A kind of salt bacillus SYW-1 and the application in cotton verticillium wilt prevention and treatment - Google Patents
A kind of salt bacillus SYW-1 and the application in cotton verticillium wilt prevention and treatment Download PDFInfo
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Abstract
Description
技术领域technical field
本发明涉及微生物菌种及其应用的技术领域,具体的涉及一种盐芽孢杆菌SYW-1及在棉花黄萎病生物防治中的应用的技术领域。The invention relates to the technical field of microbial strains and applications thereof, in particular to the technical field of a halobacillus SYW-1 and its application in the biological control of cotton verticillium wilt.
背景技术Background technique
植物根系及周围存在的大量细菌,其中一些是能够促进植物生长的根际细菌(Plant growth promoting rhizobacteria,PGPR)。某些根际细菌能够通过竞争、产生抗生素、合成铁载体以及诱导植物系统抗性等方式抑制植物土传病害,促进植物的生长。近年来,已有利用根际细菌对棉花立枯病进行生物防治的相关报道。对棉花苗期病害具有良好生防作用的木霉、粘帚霉等。A large number of bacteria exist in and around plant roots, some of which are rhizobacteria (Plant growth promoting rhizobacteria, PGPR) that can promote plant growth. Certain rhizosphere bacteria can inhibit plant soil-borne diseases and promote plant growth by competing, producing antibiotics, synthesizing siderophores, and inducing plant systemic resistance. In recent years, there have been reports on the biological control of cotton blight using rhizosphere bacteria. Trichoderma, Gliocladium, etc. have good biocontrol effects on cotton seedling diseases.
棉花根际微生物是棉花微生态系统中重要组成部分,其中棉花根际微生物指接近棉花根部,在物理、化学和生物学特性上不同于周围土体,与棉花关系紧密的土壤微生物。李家恕和王祖农通过分离发现根际细菌距离根越近数量越大,生育期呈先增后降,开花期最高。张亚平采用分离培养方法研究了北疆棉花根际微生物,筛选到棉花立枯病拮抗菌。张凤华等研究指出水分处理对棉田土壤根际微生物数量的影响比施肥要明显,花铃期适水中肥处理数量最多,而吐絮期丰水高肥达最大。顾美英等通过分离发现新疆棉花黄萎病株根际土壤微生物总量大于健株根际土壤微生物总量,特别是真菌数量大幅度增加。沈其荣等采用微生物有机肥调控根际土壤微生物群落结构,改变了土壤微生物的区系,细菌的数量大大增加,真菌数量明显减少。Cotton rhizosphere microorganisms are an important part of the cotton micro-ecosystem. Cotton rhizosphere microorganisms refer to soil microorganisms close to cotton roots, which are different from the surrounding soil in terms of physical, chemical and biological characteristics, and closely related to cotton. Li Jiashu and Wang Zunong found through isolation that the closer the rhizosphere bacteria are to the root, the greater the number, the growth period first increased and then decreased, and the flowering period was the highest. Zhang Yaping used the method of isolation and culture to study the microorganisms in the rhizosphere of cotton in northern Xinjiang, and screened out the antagonistic bacteria of cotton blight. Research by Zhang Fenghua and others pointed out that the impact of water treatment on the number of rhizosphere microorganisms in cotton field is more obvious than that of fertilization. The number of suitable water and fertilizer treatments is the largest during the flowering and boll stage, while the maximum amount of water and high fertilizer is during the boll opening period. Gu Meiying and others found that the total amount of soil microorganisms in the rhizosphere soil of Verticillium dahliae plants in Xinjiang was greater than that of healthy plants through isolation, especially the number of fungi increased significantly. Shen Qirong et al. used microbial organic fertilizers to regulate the microbial community structure of the rhizosphere soil, changing the flora of soil microorganisms, greatly increasing the number of bacteria, and significantly reducing the number of fungi.
从棉花根际分离筛选的拮抗菌适宜于在棉花根际定殖,拮抗菌的应用效果更加稳定。因此,利用棉花根际分离筛选适合棉花黄萎病防治的微生物菌种,开发高效的微生物菌剂,解决棉花植物-环境间的微生态平衡,对于防治棉花病害,提高棉花产量具有重要的实用价值。The antagonistic bacteria isolated and screened from the cotton rhizosphere are suitable for colonization in the cotton rhizosphere, and the application effect of the antagonistic bacteria is more stable. Therefore, the use of cotton rhizosphere isolation to screen microbial strains suitable for the control of cotton verticillium wilt, the development of efficient microbial agents, and the solution to the micro-ecological balance between cotton plants and the environment have important practical value for the prevention and treatment of cotton diseases and the improvement of cotton yield. .
发明内容Contents of the invention
针对现有技术未见有关棉花根际盐芽孢杆菌(Bacillus halotoler ans)用于棉花黄萎病生物防治研究报道的技术现状,本发明提供一种新菌种根际盐芽孢杆菌(Bacillus halotolerans)SYW-1CGMCC No.15008及其在棉花黄萎病生物防治中的应用。本发明通过在棉花根际土壤中分离出一批根际拮抗菌菌株,从中筛选出一株盐芽孢杆菌(Bacillus halotolerans)SYW-1CGMCC No.15008菌株,利用分离出的菌种生长温度宽、易培养等特点,利用SYW-1菌悬液浸泡棉花种子,可促进棉花种子出芽,SYW-1菌悬液施用于多年连作重病棉花地,可有效地防治棉花生育期的棉花黄萎病的作用,将棉花黄萎病对棉花生产的不利影响降低到最低限度,有利于提高棉花的产量和品质,具有显著和稳定的技术效果,作为棉花黄萎病生物防治中具有广泛而适用的价值。In view of the fact that there is no report on the use of Bacillus halotolerans in the prior art for the biological control of cotton verticillium wilt, the present invention provides a new strain of Bacillus halotolerans (Bacillus halotolerans) SYW -1CGMCC No.15008 and its application in biological control of Verticillium wilt in cotton. The present invention isolates a batch of rhizosphere antagonistic bacteria strains in the cotton rhizosphere soil, and screens out a strain of Bacillus halotolerans (Bacillus halotolerans) SYW-1CGMCC No.15008 strain from them. Cultivation and other characteristics, using SYW-1 bacterial suspension to soak cotton seeds can promote cotton seed germination, and SYW-1 bacterial suspension can be applied to cotton fields with continuous cropping and severe diseases for many years, which can effectively prevent and control cotton Verticillium wilt during the cotton growth period. Minimizing the adverse effects of cotton Verticillium wilt on cotton production is conducive to improving the yield and quality of cotton, has significant and stable technical effects, and has extensive and applicable value as a biological control of cotton Verticillium wilt.
本发明采用的主要技术方案:Main technical scheme that the present invention adopts:
本发明具体提供一种新菌种根际盐芽孢杆菌(Bacillus halotoler ans)SYW-1CGMCC No.15008。通过从棉花根际土壤筛选、分离出一株编号为SYW-1的根际盐芽孢杆菌(Bacillus halotolerans)菌种,将根际盐芽孢杆菌(Bacillus halotolerans)SYW-1通过现在常见的菌种鉴定手段获悉是一株新菌种,分离出的菌种具有生长温度宽、易培养等特点,该菌株菌悬液浸泡棉花种子,可促进棉花种子出芽,施用于多年连作重病棉花地,可有效地防治棉花生育期的棉花黄萎病的作用,将棉花黄萎病对棉花生产的不利影响降低到最低限度,有利于提高棉花的产量和品质,具有显著和稳定的技术效果,体现了筛选该菌种具有鲜明的应用价值导向。The invention specifically provides a new strain of Bacillus halotoler ans SYW-1CGMCC No.15008. By screening and isolating a strain of Bacillus halotolerans (Bacillus halotolerans) numbered SYW-1 from the cotton rhizosphere soil, the Bacillus halotolerans (Bacillus halotolerans) SYW-1 was identified through the current common strains It was learned by means that it is a new strain, and the isolated strain has the characteristics of wide growth temperature and easy cultivation, etc. The bacterial suspension of this strain soaks cotton seeds, which can promote the germination of cotton seeds. The effect of preventing and controlling cotton verticillium wilt in the cotton growth period can minimize the adverse effects of cotton verticillium wilt on cotton production, which is conducive to improving the yield and quality of cotton, and has a significant and stable technical effect. It has a distinct application value orientation.
具体的,通过对棉花根际土壤进行微生物菌种的培养、分离,筛选一批优良菌种,并从中分离筛选出一株编号为SYW-1的根际盐芽孢杆菌(Bacillus halotolerans)菌种,经微生物学分类与鉴定属于根际盐芽孢杆菌属,该菌株最适生长条件为:生长温度范围在8-42℃,最适生长温度是30℃;pH生长范围4.9-11.2,培养基为胰蛋白胨大豆琼脂培养基。参照《伯杰氏系统细菌学鉴定手册》第九版和《常用细菌系统鉴定手册》对编号为SYW-1菌株进行形态学、生理生化试验,确定SYW-1菌株为根际盐芽孢杆菌属中的成员,但是具有与常见的根际盐芽孢杆菌属成员菌种不同的特点,具有一些新菌种的特性。Specifically, by cultivating and separating microbial strains from cotton rhizosphere soil, a batch of excellent strains were screened, and a strain of Bacillus halotolerans (Bacillus halotolerans) strain numbered SYW-1 was isolated and screened therefrom, According to microbiological classification and identification, it belongs to the genus Halobacillus rhizosphere. The optimal growth conditions for this strain are: the growth temperature range is 8-42°C, and the optimum growth temperature is 30°C; the pH growth range is 4.9-11.2, and the medium is pancreas Peptone Soy Agar Medium. Referring to the ninth edition of "Bergey's Systematic Bacteriological Identification Manual" and "Common Bacterial System Identification Manual", the morphological, physiological and biochemical tests were carried out on the strain numbered SYW-1, and it was determined that the SYW-1 strain was a member of the genus Halobacillus rhizosphere. Members of the genus Rhizobacillus, but have different characteristics from the common members of the genus Rhizobacillus, and have some characteristics of new strains.
进一步,本发明通过对上述编号为SYW-1菌种进行基因测序,序列参见附后提供的SEQ ID NO:1所示,所得序列经常见网站进行比对分析,并构建系统发育树,经比对分析发现,菌株SYW-1的 16S rDNA序列与标准模式Bacillus halotolerans strain DSM 8802T同源性最高,序列相似度为96.01%,具有新菌种的鲜明技术特征,菌株SYW-1与Bacillushalotolerans strain DSM 8802T的亲缘关系最近,利用本领域常见采用的MEGA 5.0软件通过Neighbor-Joinin g方法建立系统进化树,结果经比对分析发现,菌株SYW-1与Bacillus halotolerans ATCC 25096T处于最小分支,是其近似种,置信值为89,表明该菌种作为新菌种的支持率较高,在进化树中体现较好的稳定性,经过系列菌种分子水平鉴定可知该菌株SYW-1确定为Bacillus halotolerans新种,具有新菌种典型性的特点,从分类学角度暂命名为根际盐芽孢杆菌(Bacillus halotolerans)SYW-1。Further, the present invention conducts gene sequencing on the above-mentioned bacterial species numbered SYW-1, and the sequence is shown in the attached SEQ ID NO: 1. The obtained sequences are often compared and analyzed on websites, and a phylogenetic tree is constructed. The analysis found that the 16S rDNA sequence of the strain SYW-1 had the highest homology with the standard model Bacillus halotolerans strain DSM 8802 T , with a sequence similarity of 96.01%. The phylogenetic tree of 8802 T is the closest, and the MEGA 5.0 software commonly used in this field was used to establish a phylogenetic tree through the Neighbor-Joining method. After comparison and analysis, it was found that the strain SYW-1 and Bacillus halotolerans ATCC 25096 T were in the smallest branch, and it was its Similar species, with a confidence value of 89, indicating that the strain has a high support rate as a new strain and shows good stability in the phylogenetic tree. The strain SYW-1 is determined to be Bacillus halotolerans after molecular identification of a series of strains The new species has the typical characteristics of new species, and it is tentatively named Bacillus halotolerans SYW-1 from the perspective of taxonomy.
具体的,该菌株SYW-1已保藏于布达佩斯条约微生物国际保藏单位:中国微生物菌种保藏管理委员会普通微生物中心(CGMC C)。地址:北京市朝阳区北辰西路1号院3号,中国科学院微生物研究所,邮编:100101。保藏日期2017年12月04日,菌种保藏号为CGMCCNo.15008。经微生物学鉴定暂命名为根际盐芽孢杆菌 (Bacillus halotolerans)SYW-1。Specifically, the strain SYW-1 has been deposited in the International Depository of Microorganisms under the Budapest Treaty: the Center for General Microorganisms of the China Committee for the Collection of Microorganisms (CGMC C). Address: Institute of Microbiology, Chinese Academy of Sciences, No. 3, No. 1 Courtyard, Beichen West Road, Chaoyang District, Beijing, 100101. The preservation date was December 4, 2017, and the strain preservation number was CGMCCNo.15008. After microbiological identification, it was tentatively named Bacillus halotolerans SYW-1.
新菌种根际盐芽孢杆菌(Bacillus halotolerans)SYW-1在胰蛋白胨大豆琼脂培养基上生长良好,在30℃下培养48h后,形成可见的菌落,该菌株菌落2-4mm且平滑,呈半透明、乳白色、表面湿润、边缘整齐,生长较快,革兰氏阳性菌;该菌株最适生长条件为:生长温度范围在8-42℃,最适生长温度是30℃;pH生长范围4. 9-11.2。The new strain Bacillus halotolerans (Bacillus halotolerans) SYW-1 grows well on the tryptone soybean agar medium. After culturing at 30°C for 48 hours, visible colonies are formed. The colonies of this strain are 2-4mm smooth and semi Transparent, milky white, moist surface, neat edges, fast growth, Gram-positive bacteria; the optimum growth conditions for this strain are: the growth temperature range is 8-42°C, and the optimum growth temperature is 30°C; the pH growth range is 4. 9-11.2.
进一步,本发明提供根际盐芽孢杆菌(Bacillus halotolerans)S YW-1CGMCCNo.15008在促进棉花种子出芽中的应用,具有促进棉花种子萌发,防治棉花生育期的各类棉花黄萎病的作用,具有显著和稳定的技术效果,具有广泛的应用价值。Further, the present invention provides the application of Bacillus halotolerans (Bacillus halotolerans) S YW-1CGMCCNo.15008 in promoting the germination of cotton seeds, which has the effect of promoting the germination of cotton seeds and preventing and controlling various types of cotton verticillium wilt in the growth period of cotton. Significant and stable technical effect, with a wide range of application value.
通过实施本发明提供上述具体技术方案,实施本发明内容,可以达到以下有益效果:Provide above-mentioned specific technical scheme by implementing the present invention, implement content of the present invention, can reach following beneficial effect:
(1)本发明提供的根际盐芽孢杆菌(Bacillus halotolerans)SY W-1CGMCCNo.15008是一种典型的新菌种,该菌株最适生长条件为:生长温度范围在8-42℃,最适生长温度是30℃;pH生长范围4. 9-11.2,利用分离出的菌种生长温度宽、易培养等特点,该菌株菌悬液能促进棉花种子出芽,且能有效防治棉花生育期的棉花黄萎病,定其为根际盐芽孢杆菌(Bacillus halotolerans)新种,具有新菌种典型性的特点,从分类学角度暂命名为根际盐芽孢杆菌(Bacillus h alotolerans)SYW-1。(1) Bacillus halotolerans (Bacillus halotolerans) SY W-1CGMCCNo.15008 provided by the present invention is a typical new bacterial species, and the optimal growth conditions of the bacterial strain are: the growth temperature range is 8-42 °C, the optimum The growth temperature is 30°C; the pH growth range is 4.9-11.2. Taking advantage of the characteristics of wide growth temperature and easy cultivation of the isolated strain, the bacterial suspension of this strain can promote the germination of cotton seeds, and can effectively prevent cotton in the growth period. Verticillium wilt, it is designated as a new species of Bacillus halotolerans (Bacillus h alotolerans), which has the typical characteristics of a new species, and is tentatively named Bacillus h alotolerans SYW-1 from a taxonomic point of view.
(2)将本发明分离筛选的根际盐芽孢杆菌(Bacillus halotolera ns)SYW-1CGMCCNo.15008,在以玉米浆和酵母膏为主要原料的培养基中,发酵条件为:温度32℃,转速200rpm,通气1:0.3,培养24h获得菌悬液;用1×109cfu/mL菌悬液浸种棉花种子的出芽、出苗齐、叶色浓有促进作用,多年连作重病棉花地田间施用SYW-1 菌悬液5000mL,浓度7×108cfu/mL,防效为69.9%,可有效地防治棉花生育期的棉花黄萎病的作用,将棉花黄萎病对棉花生产的不利影响降低到最低限度,有利于提高棉花的产量和品质,具有显著和稳定的技术效果,作为棉花黄萎病生物防治中具有广泛而适用的价值。(2) The Bacillus halotolera ns SYW-1CGMCC No.15008 isolated and screened by the present invention is placed in a culture medium with corn steep liquor and yeast extract as main raw materials, and the fermentation conditions are: temperature 32°C, rotation speed 200rpm , aeration 1:0.3, cultured for 24 hours to obtain a bacterial suspension; soaking cotton seeds with 1×10 9 cfu/mL bacterial suspension can promote germination, uniform seedling emergence, and thick leaf color, and field application of SYW-1 for years of continuous cropping of severely diseased cotton The bacterial suspension is 5000mL, the concentration is 7×10 8 cfu/mL, and the control effect is 69.9%. It can effectively prevent and control cotton verticillium wilt in the cotton growth period, and minimize the adverse effects of cotton verticillium wilt on cotton production. , is conducive to improving the yield and quality of cotton, has significant and stable technical effects, and has extensive and applicable value as the biological control of cotton verticillium wilt.
附图说明Description of drawings
图1所示为根际盐芽孢杆菌(Bacillus halotolerans)SYW-1C GMCC No.15008的菌落形态图。Figure 1 shows the colony morphology of Bacillus halotolerans SYW-1C GMCC No.15008.
图2所示为根际盐芽孢杆菌(Bacillus halotolerans)SYW-1C GMCC No.15008的系统发育树图。Figure 2 shows the phylogenetic tree of Bacillus halotolerans SYW-1C GMCC No.15008.
图3所示为根际盐芽孢杆菌(Bacillus halotolerans)SYW-1CG MCC No.15008的生长曲线图。Figure 3 shows the growth curve of Bacillus halotolerans SYW-1CG MCC No.15008.
具体实施方式Detailed ways
下面举实施例说明本发明,但是,本发明并不限于下述的实施例。本发明中选用的所有原辅材料,以及选用的菌种培养方法都为本领域熟知选用的,本发明中涉0ml;活化培养基:蛋白胨10g,牛肉粉3g,氯化钠5g,琼脂15g,蒸馏水1000mL,pH7.3±0.1;种子培养基:蛋白胨10g,牛肉浸出粉3g,氯化钠5g,蒸馏水1000m L,pH7.2±0.2。The following examples illustrate the present invention, but the present invention is not limited to the following examples. All the raw and auxiliary materials selected in the present invention, and the strain culture method selected are well-known in the art and selected, involving 0ml in the present invention; activation medium: peptone 10g, beef powder 3g, sodium chloride 5g, agar 15g, Distilled water 1000mL, pH7.3±0.1; seed medium: peptone 10g, beef extract powder 3g, sodium chloride 5g, distilled water 1000mL, pH7.2±0.2.
本发明中涉及到的主要试剂:甘油,牛肉膏,酵母膏,氯化钠,氢氧化钠,葡萄糖,硫酸镁,硫酸锌,硫酸亚铁,磷酸二氢钠,磷酸氢二钠,磷酸二氢钾,琼脂,蔗糖,次氯酸钠,PCR预混液(TaKaRa Biotechnology),其余试剂均为分析纯。Main reagents involved in the present invention: glycerin, beef extract, yeast extract, sodium chloride, sodium hydroxide, glucose, magnesium sulfate, zinc sulfate, ferrous sulfate, sodium dihydrogen phosphate, disodium hydrogen phosphate, dihydrogen phosphate Potassium, agar, sucrose, sodium hypochlorite, PCR master mix (TaKaRa Biotechnology), and other reagents were of analytical grade.
主要仪器与试剂:TG328A型分析天平,AB204-N型电子天平,PHS-3TC(0.01级)精密数显酸度计,101-2型干燥箱,UV-21 00分光光度计,HYG-Ⅱ回转式恒温调速摇瓶柜,LS-B50L立式压力蒸汽灭菌器,超净工作台,3K15台式冷冻离心机。Main instruments and reagents: TG328A analytical balance, AB204-N electronic balance, PHS-3TC (0.01 level) precision digital pH meter, 101-2 drying oven, UV-21 00 spectrophotometer, HYG-Ⅱ rotary type Shaker cabinet with constant temperature and speed regulation, LS-B50L vertical pressure steam sterilizer, ultra-clean workbench, 3K15 desktop refrigerated centrifuge.
实施例一:根际盐芽孢杆菌(Bacillus halotolerans)SYW-1的分离、筛选及鉴定Example 1: Isolation, screening and identification of Bacillus halotolerans SYW-1
(一)分离、筛选:(1) Separation and screening:
从棉花根际土壤中通过梯度稀释法分离出多株细菌,采用平板对峙法,根据有无抑菌圈判断其是否具有拮抗作用,初步筛选出对棉花黄萎病病原具有一定拮抗能力的菌株。对具有拮抗作用的菌株进行进一步试验,筛选出拮抗能力较强的菌株以备后续试验。Several strains of bacteria were isolated from the cotton rhizosphere soil by gradient dilution method, and the plate confrontation method was used to judge whether they had antagonistic effect according to the presence or absence of the inhibition zone, and the strains with certain antagonistic ability to the cotton Verticillium dahliae pathogen were preliminarily screened out. Further tests are carried out on the strains with antagonistic effect, and the strains with stronger antagonistic ability are screened out for subsequent tests.
通过在棉花根际土壤中分离、筛选和培养,获得一批根际微生物的菌株,从中筛选出一株编号为SYW-1的菌株,经微生物学分类与鉴定,属于芽孢杆菌属的Bacillushalotolerans。A batch of rhizosphere microbial strains were obtained by isolating, screening and culturing in cotton rhizosphere soil, and a strain numbered SYW-1 was screened out, which belonged to Bacillushalotolerans of the genus Bacillus through microbiological classification and identification.
(二)分类、鉴定:(2) Classification and identification:
1、生理生化测定1. Physiological and biochemical assays
(1)通过生长条件研究结果显示根际盐芽孢杆菌(Bacillus hal otolerans)SYW-1为一种革兰氏阳菌。在胰蛋白胨大豆琼脂培养基上生长良好,在30℃下培养48h后,形成可见的菌落,该菌株菌落2-4mm且平滑,呈半透明、乳白色、表面湿润、边缘整齐,生长较快,参见附图1所示;菌体生长温度范围在8-42℃,最适生长温度是30℃;pH生长范围4.9-11.2。(1) The results of the growth condition study showed that Bacillus hal otolerans (Bacillus hal otolerans) SYW-1 is a Gram-positive bacterium. It grows well on tryptone soybean agar medium. After culturing at 30°C for 48 hours, visible colonies are formed. The colonies of this strain are 2-4mm smooth, translucent, milky white, moist on the surface, with neat edges, and grow fast. See As shown in Figure 1; the temperature range of bacterial growth is 8-42°C, and the optimum growth temperature is 30°C; the pH growth range is 4.9-11.2.
(2)主要氮源包括但不限于蛋白胨、酵母粉;使用的主要碳源包括但不限于蔗糖、甘露糖、木糖、半乳糖、果胶糖;使用的无机组分包括但不限于氯化钾、氯化钠、磷酸二氢钠、磷酸氢二钾、二水氯化钙、七水合硫酸镁、七水合硫酸亚铁。(2) The main nitrogen sources include but not limited to peptone, yeast powder; the main carbon sources used include but not limited to sucrose, mannose, xylose, galactose, pectin sugar; the inorganic components used include but not limited to chlorinated Potassium, Sodium Chloride, Monosodium Phosphate, Dipotassium Phosphate, Calcium Chloride Dihydrate, Magnesium Sulfate Heptahydrate, Ferrous Sulfate Heptahydrate.
(3)通过对SYW-1菌株进行形态学测定,并对菌株SYW-1的形状、大小、生理生化反应进行检测,本发明的SYW-1菌株生物学特性参见表1所示。(3) Through the morphological determination of the SYW-1 strain, and detection of the shape, size, physiological and biochemical reactions of the strain SYW-1, the biological characteristics of the SYW-1 strain of the present invention are shown in Table 1.
表1:菌株SYW-1的生理生化特性Table 1: Physiological and biochemical characteristics of strain SYW-1
注:“+”表示阳性;“-”表示阴性。Note: "+" means positive; "-" means negative.
通过上根际盐芽孢杆菌(Bacillus halotolerans)SYW-1的菌体形态、培养特征观察及生理生化指标测定:菌体形态观察、菌株培养特征观察、需氧性和运动性测定、生长温度测定、耐盐试验、柠檬酸盐利用试验、触酶试验、糖类发酵试验、硝酸盐还原试验、淀粉水解,均参照《常用细菌系统鉴定手册》的方法进行。Observation of bacterial morphology and culture characteristics and determination of physiological and biochemical indicators of Bacillus halotolerans SYW-1 in the upper rhizosphere: observation of bacterial morphology, observation of culture characteristics of strains, determination of aerobicity and motility, determination of growth temperature, Salt tolerance test, citrate utilization test, catalase test, sugar fermentation test, nitrate reduction test, and starch hydrolysis are all carried out with reference to the methods in the "Common Bacterial System Identification Manual".
2、根际盐芽孢杆菌(Bacillus halotolerans)SYW-116S rDNA 的序列测定与分析:2. Sequence determination and analysis of Bacillus halotolerans SYW-116S rDNA:
(1)挑取少量SYW-1菌的单菌落,放入盛有25μL无菌水的E P管中,100℃煮沸8-10min,后迅速放入冰水混合物中5min。离心 10000r/min、5min,4℃保存,用时取上清。16SrRNA基因序列测定及其系统进化树的构建:按常规方法提取细菌菌株的总DNA,(1) Pick a small amount of single colonies of SYW-1 bacteria, put them into an EP tube filled with 25 μL of sterile water, boil at 100°C for 8-10 minutes, and then quickly put them into the ice-water mixture for 5 minutes. Centrifuge at 10000r/min for 5min, store at 4°C, and take the supernatant when used. 16SrRNA gene sequence determination and phylogenetic tree construction: extract the total DNA of bacterial strains according to conventional methods,
(2)采用特异性引物进行16S rDNA的PCR扩增,引物设计如下:(2) PCR amplification of 16S rDNA was carried out using specific primers, and the primers were designed as follows:
PA:5′-AGAGTTTGATCCTGGCTCAG-3′;PA: 5'-AGAGTTTGATCCTGGCTCAG-3';
PB:5′-AAGGAGGTGATCCAGCCGCA-3′。PB: 5'-AAGGAGGTGATCCAGCCGCA-3'.
PCR反应体系总体积50μl,10×PCR缓冲液5μl,引物各20pmo l,模板DNA(1000ng/μl)1μl,TaqTM 0.5U,dNTP 8μl。PCR扩增条件:首先在94℃预变性2min,然后98℃10s、55℃30s、72℃ 1.5min,循环30次,最后在72℃延伸10min。PCR产物的纯化:取8μl的PCR产物,在1%琼脂糖凝胶中电泳,用TaKaRa PCR Fra gment Recovery Kit从胶中回收目的片段,溶于20μl的高纯水中。对PCR产物用PA(+)和PB(-)作测序引物,测定16S rDNA序列,序列参见附后提供的SEQ ID NO:1所示。The total volume of the PCR reaction system is 50 μl, 5 μl of 10×PCR buffer, 20 pmol of each primer, 1 μl of template DNA (1000 ng/μl), 0.5 U of TaqTM, and 8 μl of dNTP. PCR amplification conditions: first pre-denature at 94°C for 2 minutes, then cycle 30 times at 98°C for 10 seconds, 55°C for 30 seconds, and 72°C for 1.5 minutes, and finally extend at 72°C for 10 minutes. Purification of PCR products: Take 8 μl of PCR products, electrophoresis in 1% agarose gel, use TaKaRa PCR Fragment Recovery Kit to recover the target fragment from the gel, and dissolve it in 20 μl of high-purity water. For the PCR product, PA(+) and PB(-) were used as sequencing primers to determine the 16S rDNA sequence, and the sequence is shown in the attached SEQ ID NO:1.
(3)将测序得到的16S rDNA序列与GenBank数据库中的核苷酸序列进行BLAST分析,从中获取相近的16S rDNA序列,用C lustal X软件和MEGA 5.2Neighbor-joining法构建系统进化树,参见附图2所示,经比对分析发现,菌株SYW-1的16S rDNA序列与标准模式Bacillus halotolerans strain DSM 8802T同源性最高,序列相似度为96.01%,利用本领域常见采用的MEGA 5.0软件通过Nei ghbor-Joining方法建立系统进化树,结果经比对分析发现,菌株SY W-1与Bacillus halotolerans ATCC 25096T处于最小分支,是其近似种,置信值为89,表明该菌种作为新菌种的可能性较高,在进化树中体现较好的稳定性,经过系列菌种分子水平鉴定可将该菌株SY W-1确定为根际盐芽孢杆菌(Bacillus halotolerans)新种,具有新菌种典型性的特点,从分类学角度暂命名为根际盐芽孢杆菌(Bacill ushalotolerans)SYW-1。(3) Perform BLAST analysis on the 16S rDNA sequence obtained by sequencing and the nucleotide sequence in the GenBank database to obtain similar 16S rDNA sequences, and construct a phylogenetic tree with Clustal X software and MEGA 5.2 Neighbor-joining method, see the attached As shown in Figure 2, it was found through comparative analysis that the 16S rDNA sequence of the strain SYW-1 had the highest homology with the standard model Bacillus halotolerans strain DSM 8802 T , with a sequence similarity of 96.01%. The Nei ghbor-Joining method was used to establish a phylogenetic tree. After comparative analysis, it was found that the strain SY W-1 and Bacillus halotolerans ATCC 25096 T were in the smallest branch, and they were similar species with a confidence value of 89, indicating that the strain SY W-1 was a new strain. The possibility is higher, and it shows better stability in the phylogenetic tree. The strain SY W-1 can be determined as a new species of Bacillus halotolerans after a series of identifications at the molecular level. Typical characteristics, tentatively named from the taxonomic point of view as Bacillus halotolerans (Bacill ushalotolerans) SYW-1.
综合16SrDNA序列分析、系统发育分析、微生物学特性分析结果,表明本发明提供的根际盐芽孢杆菌(Bacillus halotolerans)SY W-1为根际盐芽孢杆菌属的一株细菌新种,将其暂命名为根际盐芽孢杆菌(Bacillus halotolerans)SYW-1。菌株已于2017年12月04 日保藏于中国微生物菌种保藏管理委员会普通微生物中心(CGMC C)。地址:北京市朝阳区大屯路,中国科学院微生物研究所,保藏号为CGMCC No.15008。Comprehensive 16SrDNA sequence analysis, phylogenetic analysis, and microbiological characteristic analysis results show that the rhizosphere halotolerans (Bacillus halotolerans) SY W-1 provided by the present invention is a new strain of bacteria of the rhizosphere halotolerans genus. It was named as Bacillus halotolerans SYW-1. The strain was deposited in the General Microorganism Center (CGMC C) of the China Committee for the Collection of Microbial Cultures on December 4, 2017. Address: Datun Road, Chaoyang District, Beijing, Institute of Microbiology, Chinese Academy of Sciences, preservation number is CGMCC No.15008.
实施例二:棉花根际盐芽孢杆菌(Bacillus halotolerans)SYW -1的生长因子Embodiment two: the growth factor of cotton rhizosphere salt bacillus (Bacillus halotolerans) SYW-1
根据上述实施例提供的棉花根际盐芽孢杆菌(Bacillus halotoler ans)SYW-1CGMCC No.15008特性确定其具体的生长因子,将菌株SYW-1接种培养,测定温度、pH、盐、抗生素对菌株SYW-1生长的影响,结果参见表2所示。According to the characteristics of cotton rhizosphere bacillus halotoler ans (Bacillus halotoler ans) SYW-1CGMCC No.15008 provided by the foregoing examples, its specific growth factors are determined, bacterial strain SYW-1 is inoculated and cultivated, and the effects of temperature, pH, salt, and antibiotics on bacterial strain SYW are determined. -1 growth, the results are shown in Table 2.
表2:温度、pH、盐、抗生素对菌株SYW-1生长的影响Table 2: Effects of temperature, pH, salt, and antibiotics on the growth of strain SYW-1
生长曲线及培养条件,将根际SYW-1菌按以下方式进行培养,培养条件为:TSA固体培养基,pH7.0,34℃条件下培养28h,其生长曲线,参见附图3所示。通过以上结果得出SYW-1作为种子的最佳培养时间为20h,最适生长pH为7.0,大量产芽孢时间为24h。Growth curve and culture conditions. The rhizosphere SYW-1 bacteria were cultured in the following manner. The culture conditions were: TSA solid medium, pH 7.0, cultured at 34°C for 28 hours. The growth curve is shown in Figure 3. From the above results, it can be concluded that the optimal culture time of SYW-1 as a seed is 20 hours, the optimum growth pH is 7.0, and the time for mass production of spores is 24 hours.
通过上述对于根际SYW-1菌的生长因子及生理理化实验数据可知,根际SYW-1菌与常见的芽孢杆菌(Bacillus halotolerans)完全不同,与常见的根际盐芽孢杆菌(Bacillushalotolerans)相比具有新菌种的属性和特点。According to the above growth factors and physiological, physical and chemical experimental data for the rhizosphere SYW-1 bacteria, it can be known that the rhizosphere SYW-1 bacteria are completely different from the common Bacillus halotolerans, and compared with the common rhizosphere Bacillus halotolerans It has the attributes and characteristics of new strains.
实施例三:棉花根际盐芽孢杆菌(Bacillus halotolerans)SYW -1的发酵工艺研究Embodiment three: the fermentation process research of cotton rhizosphere halobacterium (Bacillus halotolerans) SYW-1
将SYW-1菌株接于活化培养基上,于30℃恒温培养2d,按一定的接种量,接入装有100mL种子培养基的500mL三角瓶中,3 0℃、180rmp条件下,摇瓶培养1d,再按照2%的接种量接种于装有100mL发酵培养基的500mL三角瓶中,30℃、180rmp条件下,摇瓶培养3d;通过碳、氮源、pH值等的优化来实现发酵获得SYW- 1菌悬液目的。OD值测定:取发酵液0.5mL,加2.5M HCl 1mL,加13.5mL去离子水,混匀,用分光光度计,在600nm波长下测定。Inoculate the SYW-1 strain on the activation medium and culture it at 30°C for 2 days. According to a certain amount of inoculum, insert it into a 500mL Erlenmeyer flask containing 100mL seed medium, and culture it in a shaker flask at 30°C and 180rmp. 1d, then inoculate 2% of the inoculum into a 500mL Erlenmeyer flask containing 100mL of fermentation medium, and culture in a shaker flask for 3d under the conditions of 30°C and 180rmp; through the optimization of carbon, nitrogen source, pH value, etc. to achieve fermentation The purpose of SYW-1 bacterial suspension. Determination of OD value: Take 0.5mL of fermentation broth, add 1mL of 2.5M HCl, add 13.5mL of deionized water, mix well, and use a spectrophotometer to measure at a wavelength of 600nm.
(1)培养基pH的确定(1) Determination of medium pH
按pH值6.0,6.5,7.0,7.5,8.0,在200r/min,温度30℃条件下发酵,得出最适生长pH值为7.0。According to the pH value of 6.0, 6.5, 7.0, 7.5, 8.0, ferment at 200r/min and temperature of 30°C, the optimum growth pH value is 7.0.
(2)碳源优化(2) Carbon source optimization
在种子培养基的基础上继续优化碳源,碳源分别为葡萄糖、蔗糖、玉米浆,其他成分为KH2PO40.1%,K2HPO40.1%,MgSO4·7H 2O 0.05%,pH7.0;试验均为3次重复。培养3d后测定菌悬液的O D值,试验结果参见表3所示。Continue to optimize the carbon source on the basis of the seed medium, the carbon source is glucose, sucrose, and corn steep liquor, and the other components are KH 2 PO 4 0.1%, K 2 HPO 4 0.1%, MgSO 4 7H 2 O 0.05%, pH7 .0; all experiments were repeated three times. After culturing for 3 days, the OD value of the bacterial suspension was measured, and the test results are shown in Table 3.
表3:发酵培养基不同碳源对SYW-1菌株的影响Table 3: Effects of different carbon sources in fermentation medium on SYW-1 strain
(3)氮源的优化(3) Optimization of nitrogen source
在种子培养基的基础上继续优化氮源,氮源分别为蛋白胨,酵母膏,(NH4)2SO4,其他成分为KH2PO40.1%,K2HPO40.1%,MgS O4·7H2O 0.05%,pH7.0。试验均为3次重复,通过不同氮源OD值检测,得出菌株的最适氮源,试验结果参见表4所示。Continue to optimize the nitrogen source on the basis of the seed medium. The nitrogen source is peptone, yeast extract, (NH 4 ) 2 SO 4 , and the other components are KH 2 PO 4 0.1%, K 2 HPO 4 0.1%, MgS O 4 · 7H 2 O 0.05%, pH 7.0. The experiments were repeated three times, and the optimal nitrogen source of the strain was obtained by detecting the OD value of different nitrogen sources. The test results are shown in Table 4.
表4:发酵培养基不同氮源对SYW-1菌株的影响Table 4: Effects of different nitrogen sources in fermentation medium on SYW-1 strain
根据表3、表4的试验结果,确定最佳碳源为玉米浆,最佳氮源为酵母膏。According to the test results in Table 3 and Table 4, it is determined that the best carbon source is corn steep liquor, and the best nitrogen source is yeast extract.
实施例四:棉花根际盐芽孢杆菌(Bacillus halotolerans)SYW -1发酵罐发酵试验Embodiment four: cotton rhizosphere salt bacillus (Bacillus halotolerans) SYW-1 fermentation tank fermentation test
在以玉米浆和酵母膏为主要原料的培养基中,发酵条件为:温度32℃,转速200rpm,通气1:0.3,时间在24h。其结果见如下表 5:In the culture medium with corn steep liquor and yeast extract as the main raw materials, the fermentation conditions are: temperature 32°C, rotation speed 200rpm, aeration 1:0.3, time 24h. The results are shown in Table 5 below:
表5:根际盐芽孢杆菌(Bacillus halotolerans)SYW-110L发酵试验结果Table 5: Fermentation test results of Bacillus halotolerans (Bacillus halotolerans) SYW-110L
发酵结束后平板计数结果表明,SYW-1菌发酵液全部存活,经冻干处理,菌体存活率高于90%。After the fermentation, the plate counting results showed that all the SYW-1 bacteria fermentation liquid survived, and after freeze-drying treatment, the bacteria body survival rate was higher than 90%.
实施例五:棉花根际盐芽孢杆菌(Bacillus halotolerans)SYW -1对棉花种子发芽的作用Embodiment five: the effect of cotton rhizosphere salt bacillus (Bacillus halotolerans) SYW-1 on cotton seed germination
(1)浸种催芽试验(1) Seed soaking germination test
用109cfu/mL菌悬液浸种3min,置于垫有湿润滤纸的培养皿内,28℃培养3d、5d、7d,检测出芽率,清水浸种为对照。Seeds were soaked with 10 9 cfu/mL bacterial suspension for 3 minutes, placed in a petri dish lined with wet filter paper, incubated at 28°C for 3 days, 5 days, and 7 days, and the germination rate was detected. Seeds soaked in water were used as a control.
(2)拮抗菌对棉花种子发芽的作用(2) Effect of antagonistic bacteria on cotton seed germination
试验结果参见表6所示,经SYW-1菌悬液处理3d、5d、7d的棉花种子出芽率均明显高于对照组。表明一定浓度的SYW-1菌悬液对棉花种子的出芽有促进作用,经SYW-1菌悬液浸种的棉花种子出苗早、出苗齐、叶色浓。The test results are shown in Table 6. The germination rate of cotton seeds treated with SYW-1 bacterial suspension for 3 days, 5 days and 7 days was significantly higher than that of the control group. It shows that a certain concentration of SYW-1 bacterial suspension can promote the germination of cotton seeds, and the cotton seeds soaked in SYW-1 bacterial suspension have early emergence, uniform emergence and thick leaf color.
表6:SYW-1菌悬液浸种对棉花出苗的影响Table 6: Effect of SYW-1 bacterial suspension soaking on cotton seedling emergence
注:大写字母分别表示P=0.01时的显着差异。Note: Capital letters indicate significant differences at P=0.01, respectively.
实施例六:棉花根际盐芽孢杆菌(Bacillus halotolerans)SYW -1的田间生防试验Embodiment six: the field biocontrol experiment of cotton rhizosphere salt bacillus (Bacillus halotolerans) SYW-1
(1)田间防效测定(1) Determination of field control effect
2016-2018年,连续3年在新疆博乐进行田间防效测定。选取多年连作重病棉花地,棉花播种后用拮抗菌液随水滴灌13h,出苗后分苗期、蕾期2次处理,每亩施用根际盐芽孢杆菌(Bacillus halotol erans)SYW-1菌悬液5000mL,浓度7×108cfu/mL,以清水处理作为对照,每个处理3次重复,每个重复面积为6667m2,对照分散于各个处理组之间。8月下旬调查1次,记录各级发病株数,计算病情指数。From 2016 to 2018, field control efficacy testing was carried out in Bole, Xinjiang for three consecutive years. Select a cotton field that has been continuously cropped for many years, drip irrigation with water for 13 hours with an antagonistic antibacterial solution after sowing the cotton, and divide it into two treatments at the seedling stage and bud stage after emergence, and apply Bacillus halotol erans SYW-1 bacterial suspension per mu 5000mL, concentration 7×10 8 cfu/mL, water treatment was used as control, each treatment was repeated 3 times, the area of each repetition was 6667m 2 , and the control was scattered among the treatment groups. A survey was conducted in late August to record the number of diseased plants at all levels and calculate the disease index.
8月下旬开始进行调查,按通用的5级标准记载病情,即:0 级:健株,无病状;1级:1~2片子叶发病;2级:1片真叶发病; 3级:2片以上真叶发病或脱落仅剩心叶;4级:植株生长点或全株枯死。以接种后第25d调查的结果计算病情指数并划分品种的抗、感类型。The investigation began in late August, and the disease was recorded according to the general 5-level standard, namely: level 0: healthy plant, no symptoms; level 1: 1 to 2 cotyledons with disease; level 2: 1 true leaf with disease; level 3: 2 More than one true leaf becomes diseased or falls off and only the heart leaf remains; Grade 4: The growing point of the plant or the whole plant dies. The disease index was calculated based on the survey results on the 25th day after inoculation, and the resistant and susceptible types of varieties were divided.
(2)田间防效试验测定(2) Determination of field control effect test
表7结果表明,根际盐芽孢杆菌(Bacillus halotolerans)SYW- 1能降低棉花黄萎病的病情指数,防效为69.9%。SYW-1菌株对棉花主要棉花黄萎病有很好的防治效果。菌株SYW-1与对照存在显著性差异。The results in Table 7 show that Bacillus halotolerans (Bacillus halotolerans) SYW-1 can reduce the disease index of cotton Verticillium wilt, and the control effect is 69.9%. SYW-1 strain has a good control effect on the main cotton Verticillium wilt. There were significant differences between the strain SYW-1 and the control.
表7:SYW-1菌悬液对棉花主要棉花黄萎病的田间试验防效Table 7: Field test control effect of SYW-1 bacterial suspension on major cotton verticillium wilt
通过上述系列实施例提供的根际盐芽孢杆菌(Bacillus halotoler ans)SYW-1CGMCC No.15008是一种典型的新菌种,该菌株最适生长条件为:8-42℃,最适生长温度是30℃;pH生长范围4.9-11. 2,利用分离出的菌种生长温度宽、易培养等特点,利用SYW-1菌悬液浸泡棉花种子,可促进棉花种子出芽,SYW-1菌悬液施用于多年连作重病棉花地,可有效地防治棉花生育期的棉花黄萎病的作用,将棉花黄萎病对棉花生产的不利影响降低到最低限度,有利于提高棉花的产量和品质,具有显著和稳定的技术效果,作为棉花黄萎病生物防治中具有广泛而适用的价值。The Bacillus halotoler ans (Bacillus halotoler ans) SYW-1CGMCC No.15008 provided by the above-mentioned series of examples is a typical new bacterial species, and the optimal growth condition of the bacterial strain is: 8-42°C, and the optimal growth temperature is 30°C; pH growth range 4.9-11. 2, taking advantage of the characteristics of the isolated strains such as wide growth temperature and easy cultivation, soaking cotton seeds with SYW-1 bacterial suspension can promote cotton seed germination, SYW-1 bacterial suspension Applied to cotton fields with severe diseases in continuous cropping for many years, it can effectively prevent and control the cotton verticillium wilt in the cotton growth period, minimize the adverse effects of cotton verticillium wilt on cotton production, and help improve the yield and quality of cotton. And stable technical effect, as the biological control of Verticillium wilt in cotton has extensive and applicable value.
上述实施例仅仅是为清楚地说明本发明所作的举例,而并非对实施方式的限定。对于所属领域的普通技术人员来说,在上述说明的基础上还可以做出其它不同形式的变化或变动。这里无需也无法对所有的实施方式予以穷举。而由此所延伸出的显而易见的变化或变动仍处于本发明的保护范围之中。The above-mentioned embodiments are only examples for clearly illustrating the present invention, rather than limiting the implementation. For those of ordinary skill in the art, other changes or changes in different forms can be made on the basis of the above description. It is not necessary and impossible to exhaustively list all the implementation manners here. However, the obvious changes or changes extended therefrom still fall within the scope of protection of the present invention.
序列表sequence listing
<110> 新疆农业科学院微生物应用研究所(中国新疆-亚美尼亚生物工程研究开发中心)<110> Institute of Applied Microbiology, Xinjiang Academy of Agricultural Sciences (China Xinjiang-Armenia Bioengineering Research and Development Center)
<120> 一种盐芽孢杆菌SYW-1及在棉花黄萎病防治中的应用<120> A kind of halobacillus SYW-1 and its application in the control of cotton verticillium wilt
<160> 1<160> 1
<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0
<210> 1<210> 1
<211> 1091<211> 1091
<212> DNA<212>DNA
<213> 盐芽孢杆菌(Bacillus halotolerans)<213> Bacillus halotolerans
<400> 1<400> 1
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ggcttcggct accacttaca gatggacccg cggcgcatta gctagttggt gaggtaatgg 240ggcttcggct accacttaca gatggacccg cggcgcatta gctagttggt gaggtaatgg 240
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tgacggatca acgccgcgtg agtgatgaag gttttcggat cgtaaagctc tgttgttagg 420tgacggatca acgccgcgtg agtgatgaag gttttcggat cgtaaagctc tgttgttagg 420
gaagaacaag taccgttcca atagggcggc accttgacgg tacctaacca gaaagccacg 480gaagaacaag taccgttcca atagggcggc accttgacgg tacctaacca gaaagccacg 480
gctaactacg tgccagcagc cgcggtaata cgtaggtggc aagcgttgtc cggaattatt 540gctaactacg tgccagcagc cgcggtaata cgtaggtggc aagcgttgtc cggaattatt 540
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gggagggtca ttggaaactg gggaacttga gtgcagaaga ggagagtgga attccacgtg 660gggagggtca ttggaaactg gggaacttga gtgcagaaga ggagagtgga attccacgtg 660
tagcggtgaa atgcctagag atgtggagga acaccagtgg cgaatgcgac tctctggtct 720tagcggtgaa atgcctagag atgtggagga acaccagtgg cgaatgcgac tctctggtct 720
gtaactgacg ctgaggagcg aaagcgtgag gagcgaacac gattatatac cctggtagtc 780gtaactgacg ctgaggagcg aaagcgtgag gagcgaacac gattatatac cctggtagtc 780
cacgcccgta aacgatgagt gctaagtgtt agggggtttc cgccccttac tgctgcagct 840cacgcccgta aacgatgagt gctaagtgtt agggggtttc cgccccttac tgctgcagct 840
cacgcattac acactccgcc tggggagtac ggtcgcgaga ttgaaactca aaggaattga 900cacgcattac acactccgcc tggggagtac ggtcgcgaga ttgaaactca aaggaattga 900
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