CN110331203B - Application of ubiquitin ligase CHAF1B as target site in preparation of lung adenocarcinoma cisplatin sensitization drug - Google Patents
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Abstract
本发明公开了泛素连接酶CHAF1B作为靶位点在制备肺腺癌顺铂增敏药物中的应用。本发明研究表明,肺腺癌顺铂耐药细胞株中泛素连接酶CAHF1B高表达,予以敲除CAHF1B后可增加肺腺癌细胞的顺铂药物敏感性。因此,CAHF1B可在制备肺腺癌顺铂增敏药物中作为靶位点,也是临床上预测肺腺癌患者顺铂药物敏感性的的分子标志物。机制研究表明,高表达的CAHF1B可通过促进NCOR2泛素化降解导致肺腺癌细胞顺铂耐药。因此,NCOR2也在制备肺腺癌顺铂增敏药中作为靶位点。The invention discloses the application of the ubiquitin ligase CHAF1B as a target site in the preparation of cisplatin-sensitizing drugs for lung adenocarcinoma. The research of the present invention shows that the ubiquitin ligase CAHF1B is highly expressed in the cisplatin-resistant cell line of lung adenocarcinoma, and the cisplatin drug sensitivity of lung adenocarcinoma cells can be increased after knocking out CAHF1B. Therefore, CAHF1B can be used as a target site in the preparation of cisplatin-sensitizing drugs for lung adenocarcinoma, and it is also a molecular marker for clinically predicting cisplatin drug sensitivity in patients with lung adenocarcinoma. Mechanistic studies have shown that highly expressed CAHF1B can lead to cisplatin resistance in lung adenocarcinoma cells by promoting the ubiquitination and degradation of NCOR2. Therefore, NCOR2 is also used as a target site in the preparation of cisplatin sensitizers for lung adenocarcinoma.
Description
技术领域technical field
本发明属于生物医药技术领域,具体涉及泛素连接酶CHAF1B作为靶位点在制备肺腺癌顺铂增敏药物中的应用。The invention belongs to the technical field of biomedicine, and specifically relates to the application of ubiquitin ligase CHAF1B as a target site in the preparation of cisplatin-sensitizing drugs for lung adenocarcinoma.
背景技术Background technique
肺癌是全球最常见的恶性肿瘤,其发病率及死亡率均位居全球第一,在中国的发病率及死亡率亦高。据2015年WHO肺癌组织学分型标准,肺癌病理类型主要包括腺癌、鳞癌、大细胞癌、腺鳞癌、小细胞癌及其他少见类型的肺癌,除小细胞癌外其他类型统称为非小细胞肺癌,在肺癌患者中占比约90%,其中腺癌比例最高约40%~55%。目前非小细胞肺癌的治疗是包括手术、化疗、放疗、分子靶向治疗及免疫治疗等多种治疗手段结合的综合治疗。因为非小细胞肺癌患者早期症状不明显,诊断时多为中晚期,失去了手术机会、需要术前新辅助化疗或术后需要行化疗抗肿瘤治疗等,所以化疗是非小细胞肺癌的重要治疗手段。肺癌的一线化疗方案以铂类为基础联合其他化疗药物为主,其中顺铂为最常用的铂类化疗药物。但是一般情况下肺癌患者对顺铂初治便耐药或是在后续治疗中逐渐出现耐药,从而导致治疗的失败。肺腺癌在非小细胞肺癌中占比最高,因此进一步探讨肺腺癌顺铂耐药的具体分子机制,为肺腺癌患者顺铂耐药逆转提供新依据迫在眉睫。Lung cancer is the most common malignant tumor in the world, and its morbidity and mortality rate rank first in the world, and the morbidity and mortality rate in China are also high. According to the 2015 WHO lung cancer histological classification standard, the pathological types of lung cancer mainly include adenocarcinoma, squamous cell carcinoma, large cell carcinoma, adenosquamous carcinoma, small cell carcinoma and other rare types of lung cancer, and other types except small cell carcinoma are collectively referred to as non-small cell carcinoma. Cell lung cancer accounts for about 90% of lung cancer patients, and the highest proportion of adenocarcinoma is about 40% to 55%. At present, the treatment of non-small cell lung cancer is a comprehensive treatment including surgery, chemotherapy, radiotherapy, molecular targeted therapy and immunotherapy. Chemotherapy is an important treatment for non-small cell lung cancer because the early symptoms of non-small cell lung cancer patients are not obvious, and most of them are in the middle and late stages when they are diagnosed. . The first-line chemotherapy for lung cancer is based on platinum-based chemotherapy combined with other chemotherapy drugs, among which cisplatin is the most commonly used platinum-based chemotherapy drug. However, in general, lung cancer patients are resistant to cisplatin after initial treatment or gradually develop drug resistance during subsequent treatment, which leads to treatment failure. Lung adenocarcinoma accounts for the highest proportion of non-small cell lung cancer. Therefore, it is urgent to further explore the specific molecular mechanism of cisplatin resistance in lung adenocarcinoma and provide new evidence for the reversal of cisplatin resistance in lung adenocarcinoma patients.
迄今为止,肺腺癌患者缺乏预测个体患者顺铂药物敏感性的信息。所以,有些患者并没有获得预期的治疗效果反而受到高毒性药物的副作用。更重要的是,由于他们的身体状况恶化,一些不必要治疗的患者可能失去额外的治疗机会。通常认为传统的病理组织学参数例如肿瘤分期或分级是肺腺癌患者的预后因素。然而即使肿瘤有相似的病理组织学特点,同样也可能有广泛不同的分子特征,属于独特的分子亚组,具有不同疾病的侵袭性和药物的敏感性。为了针对肺腺癌施行有效的精准药物治疗,需要探索肺腺癌顺铂药物增敏的新靶点。同时也需要改善分子标志物预测患者对特定的治疗反应性的能力,或者对治疗效果的评估。从基因表达分析中鉴定的多基因分类方法可以预测肺腺癌患者的顺铂药物敏感性、复发和生存。因此迫切需要能预测肺腺癌患者的顺铂药物敏感性、复发和预后的可靠标志物,以优化治疗策略和改善临床结局。To date, there is a lack of information in patients with lung adenocarcinoma to predict sensitivity to cisplatin in individual patients. Therefore, some patients did not obtain the expected therapeutic effect but suffered side effects of highly toxic drugs. What's more, some unnecessarily treated patients may lose the opportunity for additional treatment due to their deteriorating physical condition. Traditional histopathological parameters such as tumor stage or grade are generally considered to be prognostic factors in patients with lung adenocarcinoma. However, even tumors that share similar histopathologic features may similarly have widely divergent molecular features, belong to distinct molecular subgroups, and have distinct disease aggressiveness and drug sensitivity. In order to implement effective precision drug therapy for lung adenocarcinoma, it is necessary to explore new targets for cisplatin drug sensitization in lung adenocarcinoma. There is also a need to improve the ability of molecular markers to predict a patient's response to a particular treatment, or to assess the effect of a treatment. A multigene classification method identified from gene expression analysis predicts cisplatin sensitivity, recurrence, and survival in patients with lung adenocarcinoma. Therefore, there is an urgent need for reliable markers that can predict cisplatin drug sensitivity, recurrence, and prognosis in patients with lung adenocarcinoma in order to optimize treatment strategies and improve clinical outcomes.
肺癌顺铂化疗耐药机制复杂,迄今顺铂耐药机制主要与铂类药物在恶性肿瘤细胞内积聚少、DNA损伤修复增加、凋亡失活、上皮-间质转变激活、肿瘤干细胞特性等密切相关。而与之相关的蛋白及其信号通路中的重要分子通常受基因组、表观遗传学和蛋白翻译后修饰等多种因素的调控。蛋白质是生命活动的主要执行者和承担者,其功能正常与否决定着生命活动能否有序、高效的进行。基因组学和表观遗传学在基因层面上共同指导各种细胞独特的基因表达。而蛋白翻译后修饰是在蛋白水平直接影响蛋白的空间构象、活性及稳定性等,进而调控蛋白质多种功能来调节机体生命活动。蛋白翻译后修饰是指生物将mRNA翻译成蛋白质后对蛋白质进行化学修饰,此过程可形成成熟的蛋白质产物或者调控蛋白质表达水平。翻译后修饰种类高达400多种,主要类型包括磷酸化、乙酰化、泛素化、类泛素化、甲基化、糖基化等。The mechanism of cisplatin chemotherapy resistance in lung cancer is complex. So far, the mechanism of cisplatin resistance is mainly related to less accumulation of platinum drugs in malignant tumor cells, increased DNA damage repair, apoptosis inactivation, activation of epithelial-mesenchymal transition, and tumor stem cell characteristics. relevant. The related proteins and important molecules in the signaling pathway are usually regulated by multiple factors such as genome, epigenetics and protein post-translational modification. Protein is the main executor and bearer of life activities, and whether its function is normal or not determines whether life activities can be carried out in an orderly and efficient manner. Genomics and epigenetics work together at the genetic level to direct the unique gene expression of various cells. The protein post-translational modification directly affects the spatial conformation, activity and stability of the protein at the protein level, and then regulates various functions of the protein to regulate the life activities of the body. Protein post-translational modification refers to the chemical modification of protein after the organism translates mRNA into protein. This process can form mature protein products or regulate protein expression levels. There are more than 400 types of post-translational modifications, and the main types include phosphorylation, acetylation, ubiquitination, ubiquitination, methylation, and glycosylation.
蛋白泛素化是指泛素分子(一类在真核生物中广泛表达,由76个氨基酸构成的高度保守的短肽)在一系列酶作用下,连接到某一靶蛋白分子上,对靶蛋白进行特异性修饰的过程。该过程由三类酶催化:泛素活化酶(E1)、泛素结合酶(E2)和泛素连接酶(E3)。E1激活泛素并将其转移到E2上,E3招募被泛素化的E2,识别底物并且协助或直接帮助E2上的泛素转移到蛋白底物。在泛素化过程中E3具有识别底物的重要作用,人类基因组编码超过600个泛素连接酶,其中诸多泛素连接酶被证实与肿瘤的发生发展及恶性表型密切相关,并且有研究证实泛素连接酶通过调控底物来影响肺癌的顺铂耐药。Protein ubiquitination refers to that ubiquitin molecules (a highly conserved short peptide composed of 76 amino acids widely expressed in eukaryotes) are connected to a target protein molecule under the action of a series of enzymes. The process of protein specific modification. This process is catalyzed by three classes of enzymes: ubiquitin activating enzymes (E1), ubiquitin conjugating enzymes (E2) and ubiquitin ligases (E3). E1 activates ubiquitin and transfers it to E2, E3 recruits ubiquitinated E2, recognizes the substrate and assists or directly assists the transfer of ubiquitin on E2 to the protein substrate. E3 plays an important role in identifying substrates in the ubiquitination process. The human genome encodes more than 600 ubiquitin ligases, many of which have been proven to be closely related to tumor development and malignant phenotypes, and studies have confirmed Ubiquitin ligases affect cisplatin resistance in lung cancer by modulating substrates.
发明内容Contents of the invention
本发明旨在提供一种可以用于制备肺腺癌顺铂增敏药物的新靶点。The present invention aims to provide a new target that can be used to prepare cisplatin-sensitizing drugs for lung adenocarcinoma.
为探索肺腺癌患者顺铂耐药的原因,本发明行肺腺癌细胞株A549及肺腺癌顺铂耐药株A549/DDP的蛋白组芯片筛查,识别系列显著变化蛋白,对显著上调蛋白进行生信分析,发现相比A549,A549/DDP中泛素依赖性蛋白分解代谢过程活跃。本发明表明肺腺癌顺铂耐药细胞株中泛素连接酶CAHF1B高表达,提示其高表达与肺腺癌顺铂药物敏感性相关。本发明研究表明,肺腺癌顺铂耐药细胞株中泛素连接酶CAHF1B高表达,敲除CAHF1B后可增加肺腺癌细胞的顺铂药物敏感性。机制研究表明,高表达的CAHF1B可通过促进NCOR2泛素化降解导致肺腺癌细胞顺铂耐药。总的来说,数据表明高水平的CAHF1B和低表达的NCOR2与肺腺癌顺铂耐药有关。此外, CAHF1B和NCOR2在制备肺腺癌顺铂增敏药中作为靶位点,也是临床上预测肺腺癌患者顺铂药物敏感性的的分子标志物,可能是一种新的改善肺腺癌患者治疗和生存的策略。In order to explore the cause of cisplatin resistance in patients with lung adenocarcinoma, the present invention carried out proteome chip screening of lung adenocarcinoma cell line A549 and lung adenocarcinoma cisplatin-resistant strain A549/DDP, and identified a series of significantly changed proteins, which were significantly up-regulated Bioinformatics analysis of the protein revealed that compared with A549, the ubiquitin-dependent protein catabolism process was active in A549/DDP. The present invention shows that the ubiquitin ligase CAHF1B is highly expressed in lung adenocarcinoma cisplatin drug-resistant cell lines, suggesting that its high expression is related to lung adenocarcinoma cisplatin drug sensitivity. The research of the present invention shows that the ubiquitin ligase CAHF1B is highly expressed in the cisplatin-resistant cell line of lung adenocarcinoma, and the cisplatin drug sensitivity of lung adenocarcinoma cells can be increased after knocking out CAHF1B. Mechanistic studies have shown that highly expressed CAHF1B can lead to cisplatin resistance in lung adenocarcinoma cells by promoting the ubiquitination and degradation of NCOR2. Collectively, the data suggest that high levels of CAHF1B and low expression of NCOR2 are associated with cisplatin resistance in lung adenocarcinoma. In addition, CAHF1B and NCOR2 are used as target sites in the preparation of cisplatin sensitizers for lung adenocarcinoma, and they are also molecular markers for clinically predicting cisplatin drug sensitivity in patients with lung adenocarcinoma, which may be a new method to improve lung adenocarcinoma Strategies for patient care and survival.
肺腺癌患者顺铂耐药是肿瘤进展与预后不佳的主要原因之一,为探索肺腺癌顺铂耐药的机制,本课题对A549/DDP及A549细胞株行全蛋白质组芯片筛查,量化、识别A549A549/DDP细胞系差异蛋白质共7475个,可定量蛋白5758个。定义P值<0.05,A549/DDP较A549上调2倍或下调2倍及以上的蛋白为显著变化蛋白共657个,其中显著上调蛋白共312个,显著下调蛋白共345个,通过公共数据库David对显著上调蛋白进行GO分析,发现相比A549而言A549/DDP中泛素依赖性蛋白分解代谢过程活跃。由此可见泛素化过程与肺腺癌顺铂药物敏感性相关。Cisplatin resistance in patients with lung adenocarcinoma is one of the main reasons for tumor progression and poor prognosis. In order to explore the mechanism of cisplatin resistance in lung adenocarcinoma, this project screened A549/DDP and A549 cell lines with a whole proteome chip , A total of 7475 differential proteins were quantified and identified in the A549A549/DDP cell line, and 5758 proteins could be quantified. Defined as P value <0.05, A549/DDP up-regulated 2 times or down-regulated 2 times or more than A549 as significant changes. There are 657 proteins, including 312 significantly up-regulated proteins and 345 significantly down-regulated proteins. Through the public database David Significantly up-regulated proteins were analyzed by GO, and it was found that the ubiquitin-dependent protein catabolism process was active in A549/DDP compared with A549. It can be seen that the ubiquitination process is related to the sensitivity of lung adenocarcinoma to cisplatin.
显著上调的蛋白中泛素化酶较多,共46个:1个泛素活化酶、3个泛素结合酶和42个泛素连接酶。蛋白泛素化过程为E1激活泛素并将其转移到E2上,E3招募被泛素化的E2,识别底物并且协助或直接帮助E2上的泛素转移到蛋白底物。E3在泛素化过程中具有识别底物的重要作用,42个E3中,公共数据库GEPIA分析示泛素连接酶WDHD1、ARPC1A、CDC20、CHAF1B、PPP1R13L、TRIP12、AURKA、CDCA3、FBXO22高表达与肺腺癌患者总生存期呈负相关;行PCR法验证前6者的mRNA表达水平,结果提示A549/DDP细胞株中WDHD1、CHAF1B、PPP1R13L及CDC20表达量较A549细胞株上调。MTT法结果示,分别敲除上述4个基因后,均可增加A549/DDP细胞顺铂药物敏感性,选择增敏效果显著的CHAF1B进行下一步研究。这些发现提示了CHAF1B在肺腺癌细胞潜在的顺铂耐药机制中起重要作用。Among the significantly up-regulated proteins, there were more ubiquitinases, 46 in total: 1 ubiquitin activating enzyme, 3 ubiquitin conjugating enzymes and 42 ubiquitin ligases. The process of protein ubiquitination is that E1 activates ubiquitin and transfers it to E2, and E3 recruits ubiquitinated E2, recognizes the substrate and assists or directly assists the transfer of ubiquitin on E2 to the protein substrate. E3 plays an important role in identifying substrates in the process of ubiquitination. Among the 42 E3s, the public database GEPIA analysis showed that the high expression of ubiquitin ligases WDHD1, ARPC1A, CDC20, CHAF1B, PPP1R13L, TRIP12, AURKA, CDCA3, and FBXO22 were associated with pulmonary The overall survival of adenocarcinoma patients was negatively correlated; the mRNA expression levels of the first 6 patients were verified by PCR, and the results indicated that the expression levels of WDHD1, CHAF1B, PPP1R13L and CDC20 in A549/DDP cell lines were up-regulated compared with A549 cell lines. The results of MTT method showed that the knockout of the above four genes could increase the drug sensitivity of A549/DDP cells to cisplatin, and CHAF1B with a significant sensitization effect was selected for further research. These findings suggest that CHAF1B plays an important role in the underlying mechanism of cisplatin resistance in lung adenocarcinoma cells.
Ualcan数据库分析示, CHAF1B的mRNA表达水平在肺腺癌组织中较癌旁组织高,WB表明A549/DDP中CHAF1B的蛋白表达量高于A549细胞,与芯片结果一致,证实芯片结果真实可靠,且提示两者与肺腺癌顺铂耐药密切相关。成功敲除CHAF1B后WB结果示CHAF1B表达下降,NCOR2表达上调,PPP5C表达无明显改变。上述结果提示CHAF1B变化分别能调控底物NCOR2的变化。行MTT、流式细胞术结果表明,A549细胞株敲除NCOR2后,在顺铂作用下细胞活力增加、凋亡率减少。这些数据支持了泛素连接酶CHAF1B和底物NCOR2影响肺腺癌细胞顺铂耐药重要参与者的假说。Ualcan database analysis showed that the mRNA expression level of CHAF1B in lung adenocarcinoma tissue was higher than that in adjacent tissues. WB showed that the protein expression level of CHAF1B in A549/DDP was higher than that in A549 cells, which was consistent with the chip results, confirming that the chip results were true and reliable, and It is suggested that the two are closely related to cisplatin resistance in lung adenocarcinoma. After successfully knocking out CHAF1B, WB results showed that the expression of CHAF1B decreased, the expression of NCOR2 was up-regulated, and the expression of PPP5C had no significant change. The above results suggest that the changes of CHAF1B can regulate the changes of the substrate NCOR2 respectively. The results of MTT and flow cytometry showed that after knocking out NCOR2 in the A549 cell line, the cell viability increased and the apoptosis rate decreased under the action of cisplatin. These data support the hypothesis that the ubiquitin ligase CHAF1B and substrate NCOR2 affect important players in cisplatin resistance in lung adenocarcinoma cells.
进一步Co-IP结果证实CHAF1B与NCOR2分别为互作蛋白;免疫荧光双色检测示CHAF1B与NCOR2的相互作用位置主要在细胞核内,行蛋白稳定性实验证实CHAF1B促进NCOR2泛素化降解;功能回复实验结果显示:在顺铂作用下,A549/DDP中敲除CHAF1B+敲除NCOR2组较单独敲除CHAF1B组在细胞实验中细胞增殖、迁移能力增加,凋亡率减少,在动物实验中瘤体生长速度增快及大小明显增加,免疫组化提示Ki-67增加,而凋亡相关指标明显下降。因此,本发明提示CHAF1B表达及其下游靶蛋白NCOR2的检测可作为预测肺腺癌患者顺铂药物敏感性的有效方法,以指导临床决策。Further Co-IP results confirmed that CHAF1B and NCOR2 are interacting proteins; immunofluorescence double-color detection showed that the interaction between CHAF1B and NCOR2 is mainly in the nucleus, and protein stability experiments confirmed that CHAF1B promotes the ubiquitination and degradation of NCOR2; the results of functional recovery experiments It shows that under the action of cisplatin, the knockout CHAF1B + knockout NCOR2 group in A549/DDP has increased cell proliferation and migration ability in cell experiments, decreased apoptosis rate, and increased tumor growth rate in animal experiments compared with CHAF1B knockout group alone. Immunohistochemistry showed that Ki-67 increased significantly, while apoptosis-related indicators decreased significantly. Therefore, the present invention suggests that the detection of CHAF1B expression and its downstream target protein NCOR2 can be used as an effective method for predicting cisplatin drug sensitivity in patients with lung adenocarcinoma, so as to guide clinical decision-making.
总之,本发明描述了肺腺癌中改变的表达模型,并证明了其在肺腺癌顺铂药物敏感性中的潜在作用。此外,进一步研究证实泛素连接酶CAHF1B可通过促进NCOR2泛素化降解导致肺腺癌细胞顺铂耐药。我们的研究结果支持这样的概念:高水平的CHAF1B可能是肺腺癌顺铂耐药的新型预测因子,使临床医生能够确定需要更强化治疗的高危患者。因此,靶向CHAF1B途径可能成为改善肺腺癌或其他癌症患者的治疗和存活的新的治疗策略。In conclusion, the present invention describes an altered expression model in lung adenocarcinoma and demonstrates its potential role in lung adenocarcinoma cisplatin drug sensitivity. In addition, further studies confirmed that the ubiquitin ligase CAHF1B can lead to cisplatin resistance in lung adenocarcinoma cells by promoting the ubiquitination and degradation of NCOR2. Our findings support the concept that high levels of CHAF1B may be a novel predictor of cisplatin resistance in lung adenocarcinoma, allowing clinicians to identify high-risk patients who require more intensive therapy. Therefore, targeting the CHAF1B pathway may become a new therapeutic strategy to improve the treatment and survival of patients with lung adenocarcinoma or other cancers.
附图说明Description of drawings
图1:蛋白芯片筛查芯片中A549/DDP较A549显著变化蛋白。A:行A549/DDP及A549全蛋白质组芯片,识别可定量差异蛋白蛋白5758个。定义P值<0.05,A549/DDP较A549上调2倍或下调2倍及以上的蛋白为显著变化蛋白。B:蛋白翻译后修饰相关蛋白显著上调。C:对显著变化蛋白进行GO富集分析,发现泛素依赖性蛋白分解代谢过程活跃。D:A549/DDP和A549蛋白质芯片中显著变化蛋白共657个,显著上调蛋白312个,显著下调蛋白345个,显著上调的泛素化酶共46个。E:46个上调显著泛素化酶中,共1个E1、3个E2和42个E3;Figure 1: A549/DDP significantly changed protein compared with A549 in the protein chip screening chip. A: Run A549/DDP and A549 whole proteome chip, identify and quantify 5758 differential proteins. Define the P value <0.05, and the protein that A549/DDP is up-regulated by 2 times or down-regulated by 2 times or more than A549 is a significantly changed protein. B: Protein post-translational modification related proteins are significantly upregulated. C: GO enrichment analysis of significantly changed proteins revealed that ubiquitin-dependent protein catabolism was active. D: In A549/DDP and A549 protein chips, there are 657 significantly changed proteins, 312 significantly up-regulated proteins, 345 significantly down-regulated proteins, and 46 significantly up-regulated ubiquitinases. E: Among the 46 significantly up-regulated ubiquitinases, there is 1 E1, 3 E2 and 42 E3;
图2:蛋白质芯片中显著上调的E3及预后呈负相关的E3。A:A549/DDP及A549中46个显著上调泛素相关酶的蛋白丰度及相对表达量,*所标蛋白为数据库提示与预后呈负相关的蛋白。B:根据公共数据库,9个E3高表达(包括:WDHD1、ARPC1A、AURKA、CDC20、CDCA3、CHAF1B、FBXO22、PPP1R13L、TRIP12)与肺腺癌患者预后呈负相关;Figure 2: Significantly upregulated E3 and E3 with negative prognosis in protein microarray. A: The abundance and relative expression of 46 ubiquitin-related enzymes significantly upregulated in A549/DDP and A549. The proteins marked by * are proteins that the database suggests are negatively correlated with prognosis. B: According to the public database, the high expression of 9 E3s (including: WDHD1, ARPC1A, AURKA, CDC20, CDCA3, CHAF1B, FBXO22, PPP1R13L, TRIP12) is negatively correlated with the prognosis of lung adenocarcinoma patients;
图3:预后呈负相关显著上调的E3表达水平及其剂量反应线。A:PCR法结果提示A549/DDP中WDHD1、CHAF1B、PPP1R13L及CDC20的mRNA表达明显高于A549。B:敲除WDHD1、CHAF1B、PPP1R13L及CDC20后A549/DDP细胞增殖能力明显下降,IC50明显下调。*p<0.05,**p<0.01,***p<0.001;Figure 3: Significantly upregulated E3 expression levels and their dose-response lines negatively correlated with prognosis. A: The results of PCR showed that the mRNA expressions of WDHD1, CHAF1B, PPP1R13L and CDC20 in A549/DDP were significantly higher than those in A549. B: After knocking out WDHD1, CHAF1B, PPP1R13L and CDC20, the proliferation ability of A549/DDP cells was significantly decreased, and IC50 was significantly down-regulated. *p<0.05, **p<0.01, ***p<0.001;
图4:CHAF1B在肺腺癌中的表达水平及其底物探索。A:公共数据库Ualcan提示肺癌组织中CHAF1B表达高于癌旁组织。B:敲除CHAF1B后NCOR2上调,而NCOR2无明显改变。C:NCOR2和PPP5C的泛素化位点;Figure 4: Expression level of CHAF1B in lung adenocarcinoma and its substrate exploration. A: The public database Ualcan suggests that the expression of CHAF1B in lung cancer tissues is higher than that in paracancerous tissues. B: NCOR2 is upregulated after knocking out CHAF1B, while NCOR2 has no significant change. C: ubiquitination sites of NCOR2 and PPP5C;
图5:下调A549细胞中NCOR2表达可降低顺铂药物敏感性。A-B:MTT法及流式细胞术结果示A549细胞敲除NCOR2后,肺腺癌细胞对顺铂的药物敏感性下降,细胞增殖加快、凋亡减少。DDP:顺铂对A549/DDP的IC25浓度。*p<0.05;Figure 5: Down-regulation of NCOR2 expression in A549 cells reduces cisplatin drug sensitivity. A-B: The results of MTT assay and flow cytometry showed that after knocking out NCOR2 in A549 cells, the drug sensitivity of lung adenocarcinoma cells to cisplatin decreased, cell proliferation accelerated and apoptosis decreased. DDP: IC25 concentration of cisplatin on A549/DDP. *p<0.05;
图6:A549/DDP中CHAF1B与NCOR2形成复合物并促进NCOR2泛素化降解。A:免疫共沉淀法显示CHAF1B与NCOR2为相互作用蛋白。B:免疫荧光检测结果表明NCOR2(绿色)主要存在于细胞核内,CHAF1B(红色)在细胞核及细胞浆内均存在,两者共定位于细胞核。C:蛋白稳定性实验证实敲除CHAF1B后NCOR2降解速度减慢。*p<0.05;Figure 6: CHAF1B forms a complex with NCOR2 in A549/DDP and promotes ubiquitination and degradation of NCOR2. A: Co-immunoprecipitation method shows that CHAF1B and NCOR2 are interacting proteins. B: The results of immunofluorescence detection show that NCOR2 (green) mainly exists in the nucleus, CHAF1B (red) exists in both the nucleus and the cytoplasm, and both co-localize in the nucleus. C: Protein stability experiments confirmed that the degradation rate of NCOR2 slowed down after knocking out CHAF1B. *p<0.05;
图7:A549/DDP中CHAF1B通过增加NCOR2降解导致顺铂耐药。A-D:分别行MTT法、流式细胞术、划痕实验及细胞克隆形成实验进行功能回复实验证实CHAF1B通过增加NCOR2的降解导致顺铂耐药;Figure 7: CHAF1B contributes to cisplatin resistance by increasing NCOR2 degradation in A549/DDP. A-D: MTT method, flow cytometry, scratch test and cell clone formation test were performed to perform functional recovery experiments to confirm that CHAF1B leads to cisplatin resistance by increasing the degradation of NCOR2;
图8:体内实验进一步验证CHAF1B的功能。A:移植瘤实验发现A549/DDP敲除CHAF1B后顺铂对瘤体体积的抑制作用明显大于对照组。B:WB证实A549/DDP的瘤体组织中CHAF1B表达上调,敲除CHAF1B组瘤体组织中NCOR2上调。C-D:A549/DDP敲除CHAF1B后Ki-67表达明显少于对照组,凋亡指标则明显高于对照组。Bars表示标准差,*p<0.05,DDP处理浓度为A549/DDP细胞IC25浓度。Figure 8: In vivo experiments further validate the function of CHAF1B. A: The transplanted tumor experiment found that the inhibitory effect of cisplatin on the tumor volume after A549/DDP knocked out CHAF1B was significantly greater than that of the control group. B: WB confirmed that the expression of CHAF1B was up-regulated in the tumor tissue of A549/DDP, and the expression of NCOR2 was up-regulated in the tumor tissue of the knockout CHAF1B group. C-D: After A549/DDP knockout CHAF1B, the expression of Ki-67 was significantly less than that of the control group, and the apoptosis index was significantly higher than that of the control group. Bars represent the standard deviation, *p<0.05, the DDP treatment concentration is the IC25 concentration of A549/DDP cells.
实施方式Implementation
下面结合附图和实验数据对本发明做进一步的解释和说明Below in conjunction with accompanying drawing and experimental data, the present invention is further explained and illustrated
1、材料及方法:细胞培养及转染,qRT-PCR分析,蛋白质印迹分析,免疫组化测定,MTT测定,流式细胞术,免疫沉淀,免疫荧光,细胞划痕修复实验,集落形成测定,以上方法均是现有方法,在此不再累述。1. Materials and methods: cell culture and transfection, qRT-PCR analysis, western blot analysis, immunohistochemical assay, MTT assay, flow cytometry, immunoprecipitation, immunofluorescence, cell scratch repair experiment, colony formation assay, The above methods are all existing methods and will not be repeated here.
2、结果:2.1 全蛋白质组芯片分析及验证;2. Results: 2.1 Analysis and verification of the whole proteome chip;
2.1.1 A549/DDP细胞株全蛋白质组芯片中泛素依赖性蛋白分解代谢活跃,提示蛋白泛素化与顺铂耐药相关;肺腺癌患者顺铂耐药是肿瘤进展与预后不佳的主要原因之一,为探索肺腺癌顺铂耐药的机制,本课题对A549/DDP及A549细胞株行全蛋白质组芯片筛查。利用稳定同位素标记与液相色谱质谱或质谱分析整合联用的方法来量化A549及A549/DDP细胞系蛋白质,分析A549/DDP和A549的差异蛋白质,共识别差异蛋白共7475个,可定量蛋白5758个。我们定义P值<0.05,A549/DDP较A549上调2倍或下调2倍及以上的蛋白为显著变化蛋白,发现显著变化蛋白共657个,其中显著上调蛋白共312个,显著下调蛋白共345个(如图1 A)。分析显著上调蛋白发现翻译后修饰相关蛋白上调(如图1 B)。使用公共数据库https://david.ncifcrf.gov/对显著上调蛋白进行GO分析,发现相比A549而言A549/DDP中泛素依赖性蛋白分解代谢过程活跃,差异具有统计学意义(p<0.05)(如图1 C)。泛素化酶相关网站Uniprot 及Ubibrowser提示显著上调的蛋白中泛素化酶较多,共46个(如图1 D ):1个泛素活化酶(E1)、3个泛素结合酶(E2)和42个泛素连接酶(E3)(如图1 E)。2.1.1 Active ubiquitin-dependent protein catabolism in the whole proteome chip of A549/DDP cell line, suggesting that protein ubiquitination is related to cisplatin resistance; cisplatin resistance in lung adenocarcinoma patients is the cause of tumor progression and poor prognosis One of the main reasons is that in order to explore the mechanism of cisplatin resistance in lung adenocarcinoma, this project screened A549/DDP and A549 cell lines with a whole proteome microarray. Using stable isotope labeling combined with liquid chromatography mass spectrometry or mass spectrometry analysis to quantify A549 and A549/DDP cell line proteins, analyze the differential proteins of A549/DDP and A549, a total of 7475 differential proteins were identified, and 5758 proteins could be quantified indivual. We defined P value < 0.05, A549/DDP up-regulated 2 times or down-regulated 2 times or more than A549 as significantly changed proteins, and found a total of 657 significantly changed proteins, including 312 significantly up-regulated proteins and 345 significantly down-regulated proteins (Figure 1A). Analysis of significantly up-regulated proteins found that post-translational modification-related proteins were up-regulated (Figure 1 B). Using the public database https://david.ncifcrf.gov/ to perform GO analysis on the significantly up-regulated proteins, it was found that the ubiquitin-dependent protein catabolism process was active in A549/DDP compared with A549, and the difference was statistically significant (p<0.05 ) (as shown in Figure 1 C). The ubiquitinase-related websites Uniprot and Ubibrowser suggest that there are more ubiquitinases in significantly up-regulated proteins, a total of 46 (as shown in Figure 1 D): 1 ubiquitin activating enzyme (E1), 3 ubiquitin conjugating enzymes (E2 ) and 42 ubiquitin ligases (E3) (Figure 1 E).
2.1.2多种泛素连接酶可增加肺腺癌细胞顺铂药物敏感性;本课题蛋白质芯片中显著上调的泛素化酶共46个,包括1个泛素活化酶、3个泛素结合酶和42个泛素连接酶,其蛋白丰度如热图所示(如图2 A)。蛋白泛素化过程为E1激活泛素并将其转移到E2上,E3招募被泛素化的E2,识别底物并且协助或直接帮助E2上的泛素转移到蛋白底物。由此可见,E3在泛素化过程中具有识别底物的重要作用,且文献提示E3与恶性肿瘤顺铂耐药密切相关,因此课题组主要研究E3。42个E3中,为明确E3功能并探索其是否可影响肺腺癌顺铂耐药,查阅公共数据库http://gepia.cancer-pku.cn/发现上调E3中,与预后呈负相关的E3共9个(如图2B):WDHD1、ARPC1A、AURKA、CDC20、CDCA3、CHAF1B、FBXO22、PPP1R13L、TRIP12。2.1.2 A variety of ubiquitin ligases can increase the drug sensitivity of lung adenocarcinoma cells to cisplatin; a total of 46 ubiquitinases were significantly up-regulated in the protein chip of this project, including 1 ubiquitin activating enzyme and 3 ubiquitin binding enzymes enzymes and 42 ubiquitin ligases, and their protein abundances are shown in the heatmap (Fig. 2A). The process of protein ubiquitination is that E1 activates ubiquitin and transfers it to E2, and E3 recruits ubiquitinated E2, recognizes the substrate and assists or directly assists the transfer of ubiquitin on E2 to the protein substrate. It can be seen that E3 plays an important role in identifying substrates in the ubiquitination process, and the literature suggests that E3 is closely related to cisplatin resistance in malignant tumors. Therefore, the research group mainly studies E3. Among the 42 E3, in order to clarify the function of E3 and To explore whether it can affect cisplatin resistance in lung adenocarcinoma, consult the public database http://gepia.cancer-pku.cn/ and find that among the up-regulated E3s, there are 9 E3s that are negatively correlated with prognosis (as shown in Figure 2B): WDHD1 , ARPC1A, AURKA, CDC20, CDCA3, CHAF1B, FBXO22, PPP1R13L, TRIP12.
上述9个显著上调且与预后负相关的E3中,已有研究报道部分泛素连接酶表达上调与顺铂耐药相关,证实了本课题所筛查芯片结果具有真实性和可靠性。本课题选择无文献报道与顺铂耐药相关的蛋白,及少数已有文献报道与顺铂耐药相关的蛋白进行探索,包括WDHD1、CHAF1B、ARPC1A、CDC20、PPP1R13L、TRIP12。行PCR法检测其表达水平,结果提示A549/DDP细胞株中WDHD1、CHAF1B、PPP1R13L及CDC20表达量较A549细胞株上调,差异具有统计学意义(P<0.05),这与蛋白芯片结果趋势相符(如图3 A)。因为ARPC1A和TRIP12表达趋势与芯片不相符,后续不予研究这两个基因所对应蛋白。进一步探索WDHD1、CHAF1B、PPP1R13L及CDC20对A549/DDP细胞顺铂药物敏感性的影响,构建相应的si-RNA敲除A549/DDP中上述4个基因后,行MTT法检测肿瘤细胞增殖能力并计算其IC50及其IC25,发现敲除上述4个基因表达后A549/DDP细胞增殖能力明显下降(如图3 B),IC50明显下调。由于已有文献报道PPP1R13L与顺铂耐药相关,CDC20的IC50下降相对小,后续不予研究这两个蛋白。因此本课题对CHAF1B调控A549肺腺癌细胞顺铂药物敏感性的机制进行初步探索。Among the nine E3s that were significantly up-regulated and negatively correlated with prognosis, some studies have reported that the up-regulation of ubiquitin ligase expression is related to cisplatin resistance, which confirms the authenticity and reliability of the chip screening results in this project. In this project, the proteins that have not been reported to be associated with cisplatin resistance and the few proteins that have been reported to be associated with cisplatin resistance are selected for exploration, including WDHD1, CHAF1B, ARPC1A, CDC20, PPP1R13L, and TRIP12. The expression levels were detected by PCR, and the results indicated that the expression levels of WDHD1, CHAF1B, PPP1R13L and CDC20 in the A549/DDP cell line were up-regulated compared with those in the A549 cell line, and the difference was statistically significant (P<0.05), which was consistent with the trend of the protein chip results ( Figure 3 A). Because the expression trends of ARPC1A and TRIP12 were not consistent with the microarray, the corresponding proteins of these two genes were not studied in the follow-up. To further explore the effects of WDHD1, CHAF1B, PPP1R13L and CDC20 on the sensitivity of A549/DDP cells to cisplatin, construct the corresponding si-RNA to knock down the above four genes in A549/DDP, and perform MTT assay to detect the proliferation ability of tumor cells and calculate For IC50 and IC25, it was found that the proliferation ability of A549/DDP cells was significantly reduced after knocking out the expression of the above four genes (as shown in Figure 3 B), and IC50 was significantly down-regulated. Since it has been reported in the literature that PPP1R13L is associated with cisplatin resistance, and the IC50 drop of CDC20 is relatively small, these two proteins will not be studied in the future. Therefore, this topic explores the mechanism of CHAF1B regulation of cisplatin drug sensitivity in A549 lung adenocarcinoma cells.
2.2泛素连接酶通过促进底物泛素化降解导致A549肺腺癌细胞顺铂耐药;2.2.1CHAF1B促进NCOR2泛素化降解导致肺腺癌顺铂耐药;2.2 Ubiquitin ligase leads to cisplatin resistance in A549 lung adenocarcinoma cells by promoting substrate ubiquitination and degradation; 2.2.1 CHAF1B promotes NCOR2 ubiquitination and degradation to lead to cisplatin resistance in lung adenocarcinoma cells;
2.2.1.1 A549/DDP中CHAF1B可致NCOR2表达下降;全蛋白质组芯片结果提示A549/DDP细胞株的CHAF1B蛋白表达量较A549细胞株上调2.01倍,公共数据库Ualcan结果提示CHAF1B在肺癌组织表达高于癌旁组织(如图4 A)。WB结果确证A549/DDP中CHAF1B蛋白表达量较A549上调(如图4 B)。结合全蛋白质组芯片及公共数据库Biocuckoo、Phosphosite和Ualcan,仅NCOR2和PPP5C(泛素化位点 如图4 C)与CHAF1B具有互相作用关系、具有泛素化位点并且在肺腺癌中低表达。予以si-CHAF1B敲除A549/DDP中CHAF1B后,行WB法检测NCOR2和PPP5C蛋白表达水平变化,NCOR2上调,而PPP5C无明显改变(如图4 B)。2.2.1.1 CHAF1B in A549/DDP can reduce the expression of NCOR2; the whole proteome microarray results show that the expression of CHAF1B protein in A549/DDP cell line is 2.01 times higher than that in A549 cell line, and the results of public database Ualcan suggest that the expression of CHAF1B in lung cancer tissue is higher than that of Paracancerous tissue (Figure 4A). WB results confirmed that the expression of CHAF1B protein in A549/DDP was up-regulated compared with A549 (Figure 4 B). Combined with the whole proteome chip and public databases Biocuckoo, Phosphosite and Ualcan, only NCOR2 and PPP5C (ubiquitination site as shown in Figure 4 C) have an interaction relationship with CHAF1B, have ubiquitination sites and are low expressed in lung adenocarcinoma . After knocking out CHAF1B in A549/DDP with si-CHAF1B, the protein expression levels of NCOR2 and PPP5C were detected by WB method, and NCOR2 was up-regulated, while PPP5C had no significant change (as shown in Figure 4 B).
2.2.1.2 A549中下调NCOR2的表达可致细胞顺铂耐药;为明确NCOR2的功能,A、B组以A549为研究对象,分别转染si-con和si-NCOR2,C、D在A549/DDP中分别转染si-con和si-NCOR2,行MTT法检测细胞活力(如图5 A)、流式细胞术检测细胞凋亡(如图5 B),结果显示A549细胞株敲除NCOR2后细胞活力增加、凋亡减少,而A549/DDP中转染或不转染si-NCOR2,细胞活力均高、凋亡均少,提示肺腺癌细胞中NCOR2下调是顺铂耐药的原因之一。2.2.1.2 Down-regulating the expression of NCOR2 in A549 can lead to cisplatin-resistant cells; in order to clarify the function of NCOR2, A549 was used as the research object in groups A and B, which were transfected with si-con and si-NCOR2 respectively. DDP was transfected with si-con and si-NCOR2 respectively, and cell viability was detected by MTT method (as shown in Figure 5 A), and cell apoptosis was detected by flow cytometry (as shown in Figure 5 B). Cell viability increased and apoptosis decreased, while A549/DDP transfected or not transfected with si-NCOR2 had high cell viability and less apoptosis, suggesting that down-regulation of NCOR2 in lung adenocarcinoma cells is one of the reasons for cisplatin resistance .
综上所述,我们推测NCOR2可能作为CHAF1B的下游靶蛋白来调控顺铂药物敏感性。In summary, we speculate that NCOR2 may act as a downstream target protein of CHAF1B to regulate cisplatin drug sensitivity.
2.2.1.3 CHAF1B与NCOR2形成复合物并促进NCOR2泛素化降解来导致顺铂耐药;免疫共沉淀探索CHAF1B和NCOR2的相互作用关系,结果表明CHAF1B和NCOR2为相互作用蛋白(如图6 A)。行IF双色检测明确CHAF1B与NCOR2共同作用位置,结果显示CHAF1B(红色)存在于细胞核及细胞浆,NCOR2(绿色)存在于细胞核,提示CHAF1B和NCOR2相互作用的主要位于细胞核内(如图6 B)。蛋白稳定性实验结果提示敲除CHAF1B后NCOR2降解速度明显减慢(如图6 C)。上述实验证实CHAF1B和NCOR2为互相作用蛋白,并且CHAF1B促进NCOR2泛素化降解。2.2.1.3 CHAF1B forms a complex with NCOR2 and promotes the ubiquitination and degradation of NCOR2 to cause cisplatin resistance; co-immunoprecipitation explores the interaction relationship between CHAF1B and NCOR2, and the results show that CHAF1B and NCOR2 are interacting proteins (as shown in Figure 6 A) . IF dual-color detection was performed to clarify the joint interaction between CHAF1B and NCOR2. The results showed that CHAF1B (red) exists in the nucleus and cytoplasm, and NCOR2 (green) exists in the nucleus, suggesting that the interaction between CHAF1B and NCOR2 is mainly located in the nucleus (Figure 6 B) . The results of protein stability experiments suggested that the degradation rate of NCOR2 was significantly slowed down after knocking out CHAF1B (Figure 6C). The above experiments confirmed that CHAF1B and NCOR2 are interacting proteins, and CHAF1B promotes the ubiquitination and degradation of NCOR2.
行功能回复实验探索CHAF1B通过调控NCOR2影响顺铂耐药的功能。以A549/DDP为研究对象设置A-E共5组,A、B两组分别转染si-control和si-CHAF1B,C、E两组分别转染si-CHAF1B、si-NCOR2,D组同时敲除CHAF1B和NCOR2,并且C-E三组转染后予以DDP处理,予以上述处理后分别行MTT法(如图7 A)、流式细胞术(如图7 B)、划痕实验(如图7 C)及细胞克隆形成实验(如图7 D)进行功能回复实验,实验结果表明予以DDP处理时敲除A549/DDP中CHAF1B后,细胞增殖能力明显下降、凋亡明显增加。敲除CHAF1B后再敲除NCOR2,细胞增殖能力恢复、凋亡减少。Functional recovery experiments were performed to explore the function of CHAF1B affecting cisplatin resistance by regulating NCOR2. A549/DDP was used as the research object to set up 5 groups A-E, groups A and B were transfected with si-control and si-CHAF1B respectively, groups C and E were transfected with si-CHAF1B and si-NCOR2 respectively, and group D was knocked out at the same time CHAF1B and NCOR2, and three groups C-E were treated with DDP after transfection. After the above treatment, MTT method (as shown in Figure 7 A), flow cytometry (as shown in Figure 7 B), and scratch test (as shown in Figure 7 C) were performed respectively. And the cell clone formation experiment (as shown in Figure 7 D) was used for functional recovery experiments. The experimental results showed that when CHAF1B in A549/DDP was knocked out when DDP was treated, the cell proliferation ability was significantly decreased and apoptosis was significantly increased. After knocking out CHAF1B and then knocking out NCOR2, the cell proliferation ability was restored and apoptosis was reduced.
2.2.1.4 动物实验证实CHAF1B促进NCOR2降解增加肺腺癌顺铂抵抗性;为了进一步验证CHAF1B和NCOR2的相互作用后的功能,在动物实验中将分别转染(1)si-con,(2)si-CHAF1B,(3)si-CHAF1B+si-NCOR2的A549/DDP细胞进行小鼠皮下植瘤,敲除CHAF1B后顺铂处理后的瘤体生长速度及大小明显小于对照组(P<0.05,图8 A-B)。WB证实A549/DDP的组织中CHAF1B表达上调,敲除CHAF1B后的瘤体组织中NCOR2上调。通过免疫组化检测肿瘤增殖相关指标Ki-67,可以发现CHAF1B敲除组的Ki67阳性率明显小于对照组(图8 C),凋亡指标明显上调(图8 D)。体内实验进一步证明敲除CHAF1B能增加肺腺癌顺铂敏感性、使细胞增殖减少并且凋亡增加,同时敲除CHAF1B和NCOR2致肺腺癌的顺铂药物敏感性下降、细胞增殖增多并且凋亡减少。2.2.1.4 Animal experiments confirmed that CHAF1B promotes the degradation of NCOR2 and increases lung adenocarcinoma cisplatin resistance; in order to further verify the function of the interaction between CHAF1B and NCOR2, in animal experiments, transfect (1) si-con, (2) si-CHAF1B, (3) A549/DDP cells of si-CHAF1B+si-NCOR2 were used to subcutaneously implant tumors in mice, and the growth rate and size of the tumors treated with cisplatin after knocking out CHAF1B were significantly smaller than those in the control group (P<0.05, Figure 8A-B). WB confirmed that the expression of CHAF1B was up-regulated in A549/DDP tissues, and NCOR2 was up-regulated in tumor tissues after knocking out CHAF1B. By immunohistochemical detection of Ki-67, an indicator related to tumor proliferation, it can be found that the positive rate of Ki67 in the CHAF1B knockout group was significantly lower than that in the control group (Figure 8C), and the apoptosis indicators were significantly up-regulated (Figure 8D). In vivo experiments further proved that knocking out CHAF1B can increase cisplatin sensitivity, decrease cell proliferation and increase apoptosis in lung adenocarcinoma, while knocking out CHAF1B and NCOR2 can lead to decreased cisplatin sensitivity, increased cell proliferation and increased apoptosis in lung adenocarcinoma reduce.
综上所述,细胞实验和动物实验证实CHAF1B促进NCOR2泛素化降解可导致A549/DDP细胞顺铂耐药。结合肺腺癌患者标本中CHAF1B表达上调而NCOR2表达下调,两者的负性关系极可能为临床上肺腺癌患者顺铂化疗敏感性预判提供新证据,为顺铂耐药逆转提供重要的分子靶标。In summary, cell experiments and animal experiments have confirmed that CHAF1B promotes the ubiquitination and degradation of NCOR2, which can lead to cisplatin resistance in A549/DDP cells. Combined with the up-regulation of CHAF1B expression and the down-regulation of NCOR2 expression in lung adenocarcinoma patient specimens, the negative relationship between the two is likely to provide new evidence for the prediction of cisplatin chemotherapy sensitivity in clinical lung adenocarcinoma patients, and provide important evidence for the reversal of cisplatin resistance. molecular target.
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"Overcoming chemotherapy resistance of ovarian cancer cells by liposomal cisplatin: Molecular mechanisms unveiled by gene expression profiling";Martin Koch et al.;《Biochemical Pharmacology》;20130208;第85卷;第1080页第3.4节、第1082页第3.5节 * |
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