CN110295174A - Transgenic Arabidopsis line with overexpression of FIPV gene and construction method thereof - Google Patents
Transgenic Arabidopsis line with overexpression of FIPV gene and construction method thereof Download PDFInfo
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Abstract
Description
技术领域technical field
本发明属于植物转基因技术领域,具体涉及一种FIPV基因过量表达的转基因拟南芥株系及其构建方法。The invention belongs to the technical field of plant transgenesis, and in particular relates to a transgenic Arabidopsis strain with overexpression of FIPV gene and a construction method thereof.
背景技术Background technique
氮素对植物的生长和发育起着非常重要的作用,绝大多数的陆生植物吸收氮素以硝态氮(NO3 -)为主。大量的研究表明,NO3 -不但是一种营养物质,而且还是一种信号分子,在植物短期和长期生长过程中起调控作用。短期效应主要体现在硝态氮初级响应,即施加NO3 -时植物体内有超过1000多个基因的表达迅速发生变化,比如NRTs,NIAs和NiR在NO3 -处理几分钟内被诱导表达。长期效应表现在NO3 -影响植物根系形态建成、种子休眠、开花、生物钟和不依赖于ABA的气孔关闭和生长素运输等过程。近十年来,一些重要的参与NO3 -初级响应过程并影响NO3 -代谢过程的调控基因被鉴定。这些调控基因包括转运蛋白类,如NRT1.1;蛋白激酶类,如CIPK8和CIPK23;转录因子类,如NLP7、TGA1、TGA4、TCP20、NRG2等;microRNA类,如micR167。最近的研究表明,参与真核生物mRNA前体3’末端加工的多聚腺苷酸化复合体(CPSF)在调控硝态氮信号途径中起重要作用。FIPV是CPSF的关键成员,极有可能调控植物的硝态氮感知、吸收、转运和同化等过程。因此鉴定该基因的功能对于研究植物硝态氮代谢过程,进而提高植物氮素利用率非常重要。Nitrogen plays a very important role in the growth and development of plants. Nitrate nitrogen (NO 3 - ) is the main nitrogen absorbed by most terrestrial plants. A large number of studies have shown that NO 3 - is not only a nutrient, but also a signal molecule, which plays a regulatory role in the short-term and long-term growth of plants. The short-term effect is mainly reflected in the primary response of nitrate nitrogen, that is, the expression of more than 1000 genes in plants changes rapidly when NO 3 - is applied, such as NRTs, NIAs and NiR are induced within a few minutes of NO 3 - treatment. The long - term effects of NO 3 -affect plant root morphogenesis, seed dormancy, flowering, circadian clock, stomatal closure and auxin transport independent of ABA. In the past ten years, some important regulatory genes involved in the NO 3 - primary response process and affecting the NO 3 -metabolism process have been identified. These regulatory genes include transporters, such as NRT1.1; protein kinases, such as CIPK8 and CIPK23; transcription factors, such as NLP7, TGA1, TGA4, TCP20, NRG2, etc.; microRNAs, such as micR167. Recent studies have shown that the polyadenylation complex (CPSF), involved in the processing of the 3' end of eukaryotic pre-mRNA, plays an important role in regulating the nitrate nitrogen signaling pathway. FIPV is a key member of CPSF, which is very likely to regulate the processes of nitrate nitrogen sensing, uptake, transport and assimilation in plants. Therefore, identifying the function of this gene is very important for studying the process of plant nitrate nitrogen metabolism and improving plant nitrogen utilization efficiency.
鉴定基因功能首先需要获得该基因的突变体和过量表达株系。在突变体中由于缺失该基因,会产生相应的分子、生化或者生理表型,由此可以推断出该基因的功能。同时,还需要研究该基因大量表达时,分子、生化或者生理表型的变化。因此,构建目的基因的过量表达株系是鉴定基因功能的必需环节。一般地,利用拟南芥构建目的基因过量表达株系采用根瘤农杆菌介导的浸花法。首先,提取植物的总RNA,以此为模板进行反转录得到第一链cDNA,进行PCR反应克隆目的基因的cDNA或者编码区序列(CDS)。然后,将克隆得到的cDNA或CDS连入强启动子(如35S promoter)下游构建植物表达载体,将该表达载体转化根瘤农杆菌。最后,将转化的农杆菌培养至合适浓度,将拟南芥的花序侵入其中,农杆菌可以通过花粉管进入植物受体,并将包含强启动子融合目的基因cDNA或CDS的序列整合到宿主植物基因组中。植物表达载体一般都含有抗生素标记基因(如抗Kana,氨苄或潮霉素基因)用以筛选转基因植物。转基因植株的种子可以生长在含有相应抗生素的固体培养基上并萌发和生长,非转基因种子只能萌发而不能生长。Identification of gene function first requires the acquisition of mutants and overexpression lines of the gene. Due to the deletion of the gene in the mutant, corresponding molecular, biochemical or physiological phenotypes will be produced, from which the function of the gene can be deduced. At the same time, it is also necessary to study the molecular, biochemical or physiological phenotype changes when the gene is expressed in large quantities. Therefore, constructing an overexpression line of the target gene is a necessary step in identifying the function of the gene. Generally, the Agrobacterium tumefaciens-mediated flower dipping method is used to construct a target gene overexpression line using Arabidopsis thaliana. First, extract the total RNA of the plant, and use it as a template to perform reverse transcription to obtain the first-strand cDNA, and perform PCR reaction to clone the cDNA or coding sequence (CDS) of the target gene. Then, the cloned cDNA or CDS is linked into a strong promoter (such as 35S promoter) downstream to construct a plant expression vector, and the expression vector is transformed into Agrobacterium tumefaciens. Finally, the transformed Agrobacterium is cultivated to a suitable concentration, and the inflorescence of Arabidopsis is invaded, and the Agrobacterium can enter the plant receptor through the pollen tube, and integrate the cDNA or CDS sequence containing the strong promoter fusion target gene into the host plant in the genome. Plant expression vectors generally contain antibiotic marker genes (such as anti-Kana, ampicillin or hygromycin genes) for screening transgenic plants. The seeds of the transgenic plants can grow on the solid medium containing the corresponding antibiotics and germinate and grow, while the non-transgenic seeds can only germinate but not grow.
研究者一般希望过量表达株系中的目的基因表达量尽量高并且能够稳定遗传。因此,研究FIPV基因的功能,构建高效表达且稳定遗传的过量表达系是鉴定该基因在调控NO3 -代谢途径中的功能是关键关节。Researchers generally hope that the expression level of the target gene in the overexpression line is as high as possible and can be stably inherited. Therefore, studying the function of FIPV gene and constructing an overexpression line with high expression and stable inheritance are the key joints to identify the function of this gene in regulating the NO 3 - metabolic pathway.
发明内容Contents of the invention
为了达到目的基因高效表达和稳定遗传的目的,本发明提供了一种FIPV基因过量表达的转基因拟南芥株系及其构建方法。In order to achieve the purpose of high-efficiency expression and stable inheritance of the target gene, the invention provides a transgenic Arabidopsis strain with overexpression of the FIPV gene and a construction method thereof.
为了实现上述目的,本发明采用的技术方案为:In order to achieve the above object, the technical scheme adopted in the present invention is:
本发明FIPV基因过量表达的转基因拟南芥株系的构建方法,所述FIPV基因过量表达的转基因拟南芥株系的构建方法包括:用根瘤农杆菌通过浸花法得FIPV基因过量表达的转基因拟南芥株系。The construction method of the transgenic Arabidopsis strain with FIPV gene overexpression of the present invention, the construction method of the transgenic Arabidopsis strain with FIPV gene overexpression comprises: using Agrobacterium tumefaciens to obtain the transgene with FIPV gene overexpression through flower dipping method Arabidopsis strains.
所述FIPV基因过量表达的转基因拟南芥株系的构建方法包括以下步骤:The construction method of the transgenic Arabidopsis strain of described FIPV gene overexpression comprises the following steps:
步骤一,拟南芥培养,将4℃低温和避光处理3d的拟南芥种子播种于蛭石上,加入1/2MS培养液,置于相对湿度70%,温度23℃,光照和黑暗时间分别为16h和/8h的植物专用培养箱中培养;Step 1, Arabidopsis culture, sow Arabidopsis seeds treated at 4°C low temperature and dark for 3 days on vermiculite, add 1/2MS culture solution, place at 70% relative humidity, temperature 23°C, light and dark time respectively Cultivate in a plant-specific incubator for 16h and /8h;
步骤二,制备大肠杆菌DH5α感受态细胞;Step 2, preparing Escherichia coli DH5α competent cells;
步骤三,利用Gateway技术构建FIPV过表达的表达载体Pmdc83-FIPV;Step 3, using Gateway technology to construct the expression vector Pmdc83-FIPV for overexpression of FIPV;
步骤四,利用试剂盒法提取PMDC83-FIPV质粒;Step 4, using the kit method to extract the PMDC83-FIPV plasmid;
步骤五,制备农杆菌GV3101感受态细胞;Step 5, preparing Agrobacterium GV3101 competent cells;
步骤七,PMDC83-FIPV表达载体转化农杆菌;Step 7, transforming the PMDC83-FIPV expression vector into Agrobacterium;
步骤八,筛菌鉴定阳性农杆菌转化子;Step 8, screening bacteria to identify positive Agrobacterium transformants;
步骤九,农杆菌介导的遗传转化;Step 9, genetic transformation mediated by Agrobacterium;
步骤十,转基因植株T1代的获得及分离比的鉴定;Step 10, obtaining the T1 generation of transgenic plants and identifying the segregation ratio;
步骤十一,转基因植株T3代中筛选纯合的FIPV过表达转基因株系;Step 11, screening homozygous FIPV overexpression transgenic lines in the T3 generation of transgenic plants;
步骤十一,FIPV过表达转基因株系的DNA水平、RNA水平及蛋白水平的鉴定。Step eleven, identifying the DNA level, RNA level and protein level of the FIPV overexpression transgenic line.
所述步骤三具体包括:提取拟南芥总RNA,然后进行反转录得到第一链cDNA,以此为模板,设计特异扩增FIPV编码区序列(CDS)的正向引物F和反向引物R,两引物的序列如下:The step three specifically includes: extracting Arabidopsis total RNA, and then performing reverse transcription to obtain the first-strand cDNA, using this as a template to design a forward primer F and a reverse primer for specifically amplifying the FIPV coding region sequence (CDS) R, the sequences of the two primers are as follows:
F(正向引物):5’-CGGGGTACCATGGAAGAGGACGATGAG-3’;F (forward primer): 5'-CGGGGTACCATGGAAGAGGACGATGAG-3';
R(反向引物):5’-CCGCTCGAG TCATCCCACACATACTCT-3’;R (reverse primer): 5'-CCGCTCGAG TCATCCCACACATACTCT-3';
利用F和R进行PCR反应,产物凝胶回收后通过酶切连接入Gateway兼容的载体pENTR3C,构建克隆载体pENTR 3C-FIPV,然后将pENTR 3C-FIPV与含有35S强启动子和潮霉素标记基因的表达载体pMDC83进行LR反应,得到FIPV过表达的pMDC83-FIPV表达载体。用该表达载体转化感受态大肠杆菌DH5α,对pMDC83-FIPV序列测定后得到拟南芥FIPV基因CDS序列所示:Use F and R to carry out PCR reaction. After the product is recovered from the gel, it is ligated into the Gateway-compatible vector pENTR3C by enzyme digestion to construct the cloning vector pENTR 3C-FIPV, and then combine pENTR 3C-FIPV with the 35S strong promoter and hygromycin marker The expression vector pMDC83 was subjected to LR reaction to obtain the pMDC83-FIPV expression vector overexpressing FIPV. Use this expression vector to transform competent escherichia coli DH5α, obtain Arabidopsis thaliana FIPV gene CDS sequence as shown in after the pMDC83-FIPV sequence is determined:
用限制性内切酶Kpn I和Xho I分别对PCR产物和Gateway兼容的载体pENTR3C进行双酶切,将得到的含有黏性末端的FIPV CDS连接入酶切开的pENTR3C构建克隆载体pENTR3C-FIPV,然后将pENTR 3C-FIPV与包含35S强启动子和潮霉素标记基因的表达载体pMDC83进行LR反应,得到FIPV过表达的pMDC83-FIPV表达载体。The PCR product and the Gateway-compatible vector pENTR3C were double-digested with restriction endonucleases Kpn I and Xho I respectively, and the resulting FIPV CDS containing cohesive ends were ligated into pENTR3C cut by enzymes to construct the cloning vector pENTR3C-FIPV. Then pENTR 3C-FIPV was subjected to LR reaction with expression vector pMDC83 containing 35S strong promoter and hygromycin marker gene to obtain pMDC83-FIPV expression vector overexpressing FIPV.
首次克隆到了拟南芥FIPV基因的编码区序列,具体序列如下:For the first time, the sequence of the coding region of the Arabidopsis FIPV gene was cloned, and the specific sequence is as follows:
本发明所述FIPV基因过量表达的转基因拟南芥株系为OE31和OE51。The transgenic Arabidopsis lines with overexpression of FIPV gene in the present invention are OE31 and OE51.
本发明的有益效果为:The beneficial effects of the present invention are:
1.本发明构建的FIPV基因过表达拟南芥转基因株系为首次报道,可以直接用农杆菌介导的浸花法进行遗传转化,获得FIPV过表达的新种质,为该鉴定该基因的功能鉴定提供基础。1. The FIPV gene overexpression Arabidopsis transgenic strain constructed by the present invention is reported for the first time, and can be directly transformed by the flower dipping method mediated by Agrobacterium to obtain a new germplasm with FIPV overexpression, which is the basis for the identification of the gene. Functional identification provides the basis.
2.构建过量表达系所使用的植物表达载体在目的基因下游融合一个GFP标记基因。因此,该过量表达株系除了实现目的基因高效表达外,GFP蛋白还可以用于FIPV基因在植物中的亚细胞定位。同时,使用GFP抗体通过免疫反应可以提取过表达株系中FIPV融合GFP蛋白,实现提纯FIPV蛋白的目的。2. The plant expression vector used to construct the overexpression line is fused with a GFP marker gene downstream of the target gene. Therefore, in addition to achieving high-efficiency expression of the target gene in the overexpression strain, the GFP protein can also be used for the subcellular localization of the FIPV gene in plants. At the same time, the FIPV fusion GFP protein in the overexpression strain can be extracted by using the GFP antibody through the immune reaction, so as to achieve the purpose of purifying the FIPV protein.
3.在筛选阳性的转化农杆菌克隆的中,使用抗生素Kana,而在筛选阳性转基因植株中,使用抗生素潮霉素。使用两种不同的抗生素最为筛选条件,可以极大减少假阳性出现的几率,确保得到的阳性克隆特异性高。3. The antibiotic Kana was used in the screen-positive transformed Agrobacterium clones, and the antibiotic hygromycin was used in the screen-positive transgenic plants. Using two different antibiotics as the most screening conditions can greatly reduce the chance of false positives and ensure that the positive clones obtained have high specificity.
附图说明Description of drawings
图1为植物表达载体pMDC 83-FIPV构建方法示意图;Fig. 1 is a schematic diagram of the construction method of the plant expression vector pMDC 83-FIPV;
图2为以拟南芥cDNA为模板克隆FIPV基因CDS的电泳图,其中,1—4泳道3792bp处条带为FIPV基因CDS;Fig. 2 is the electrophoresis diagram of cloning the FIPV gene CDS using Arabidopsis cDNA as a template, wherein the band at 3792bp in lanes 1-4 is the FIPV gene CDS;
图3为以大肠杆菌中克隆载体pENTR 3C-FIPV(重组质粒)为模板的克隆FIPV基因CDS的电泳图,其中,1—4泳道3792bp处条带为FIPV基因CDS,5泳道为不加模板的阴性对照;Fig. 3 is the electrophoresis figure of cloning FIPV gene CDS using the cloning vector pENTR 3C-FIPV (recombinant plasmid) in E. negative control;
图4为以大肠杆菌中表达载体pMDC 83-FIPV(重组质粒)为模板的克隆FIPV基因CDS的电泳图,其中,1—4泳道3792bp处条带为FIPV基因CDS,5泳道为不加模板的阴性对照;Fig. 4 is the electrophoresis figure of the cloned FIPV gene CDS using the expression vector pMDC 83-FIPV (recombinant plasmid) in Escherichia coli as a template, wherein, the band at 3792bp in the 1-4 swimming lanes is the FIPV gene CDS, and the 5 swimming lanes are without template negative control;
图5为以根瘤农杆菌中表达载体pMDC 83-FIPV(重组质粒)为模板的克隆FIPV基因CDS的电泳图,其中,1—4泳道3792bp处条带为FIPV基因CDS,5泳道为不加模板的阴性对照;Figure 5 is an electrophoresis image of the cloned FIPV gene CDS using the expression vector pMDC 83-FIPV (recombinant plasmid) in Agrobacterium tumefaciens as a template, wherein the band at 3792 bp in lanes 1-4 is the CDS of the FIPV gene, and lane 5 is without template negative control;
图6为利用荧光实时定量PCR检测FIPV过表达的转基因株系OE31和OE51中FIPV表达量。Fig. 6 is the detection of FIPV expression levels in FIPV overexpressed transgenic lines OE31 and OE51 by fluorescent real-time quantitative PCR.
具体实施方式Detailed ways
下面结合实例对本发明做进一步说明。Below in conjunction with example the present invention will be further described.
实施例1Example 1
拟南芥FIPV基因CDS序列的克隆,植物材料为拟南芥。Cloning of Arabidopsis thaliana FIPV gene CDS sequence, the plant material is Arabidopsis thaliana.
1.拟南芥总RNA的提取(试剂盒法)1. Extraction of Arabidopsis total RNA (kit method)
利用试剂盒法(柱式总RNA提取试剂盒)提取相应拟南芥植株的总RNA,具体方法如下:Utilize the kit method (column total RNA extraction kit) to extract the total RNA of corresponding Arabidopsis plants, the specific method is as follows:
(1)称取约100mg材料于1.5mL Eppendorf管中,在液氮中充分研磨;(1) Weigh about 100mg of the material into a 1.5mL Eppendorf tube, and grind it fully in liquid nitrogen;
(2)加入1mL Buffer RLT(材料体积小于等于Buffer RLT体积的10%),充分震荡混匀,室温静置5min;(2) Add 1mL Buffer RLT (the volume of the material is less than or equal to 10% of the volume of Buffer RLT), shake and mix well, and let stand at room temperature for 5 minutes;
(3)为充分去除细胞壁残渣、蛋白、脂肪、多糖等,4℃,12000rpm离心10min,将上清转移到新的离心管中;(3) In order to fully remove cell wall residues, proteins, fats, polysaccharides, etc., centrifuge at 12,000 rpm for 10 minutes at 4°C, and transfer the supernatant to a new centrifuge tube;
(4)分相:(4) Phase separation:
①加0.2mL氯仿,剧烈震荡15s,室温静置2min;①Add 0.2mL chloroform, shake vigorously for 15s, and let stand at room temperature for 2min;
②离心(4℃,12000rpm,勿超过12000rpm)10min;② Centrifuge (4°C, 12000rpm, do not exceed 12000rpm) for 10min;
(5)沉淀,并去除多糖:(5) Precipitation and removal of polysaccharides:
①取无色水相(大约原初Buffer RLT体积的50%,约500μL)至一新的Eppendorf管中,切勿吸到中间层;① Take the colorless aqueous phase (about 50% of the volume of the original Buffer RLT, about 500 μL) into a new Eppendorf tube, do not suck into the middle layer;
②加0.25mL 70%乙醇,颠倒混匀;②Add 0.25mL of 70% ethanol, mix by inverting;
(6)将上步所得溶液加入到已装入吸附柱的收集管中(若液体体积超过700μL,则分两次转移),4℃,12000rpm离心20s,倒掉收集管中的废液,将吸附柱重新放回收集管中;(6) Add the solution obtained in the previous step into the collection tube that has been loaded into the adsorption column (if the liquid volume exceeds 700μL, transfer it twice), centrifuge at 12000rpm for 20s at 4°C, pour off the waste liquid in the collection tube, and Put the adsorption column back into the collection tube;
(7)向吸附柱中加入700μL Buffer RW1,4℃,12000rpm离心20s,倒掉收集管中的废液,将吸附柱重新放回收集管中;(7) Add 700 μL Buffer RW1 to the adsorption column, centrifuge at 12,000 rpm for 20 seconds at 4°C, pour off the waste liquid in the collection tube, and put the adsorption column back into the collection tube;
(8)向吸附柱中加入500μL Buffer RW2,4℃,12000rpm离心20s,倒掉收集管中的废液,将吸附柱重新放回收集管中;(8) Add 500 μL Buffer RW2 to the adsorption column, centrifuge at 12,000 rpm for 20 seconds at 4°C, pour off the waste liquid in the collection tube, and put the adsorption column back into the collection tube;
(9)重复步骤(8)(9) Repeat step (8)
(10)4℃,12000rpm空离2min;(10) 4°C, 12000rpm air separation for 2min;
(11)将空的吸附柱置于室温数分钟,以彻底晾干;(11) Place the empty adsorption column at room temperature for several minutes to dry completely;
(12)将吸附柱置于一个新的无RNase离心管中,加入30μL RNase-free water,室温放置1min,4℃,12000rpm离心1min,收集RNA溶液,置于-70℃保存。(12) Put the adsorption column in a new RNase-free centrifuge tube, add 30 μL RNase-free water, place at room temperature for 1 min, centrifuge at 12000 rpm at 4 °C for 1 min, collect the RNA solution, and store at -70 °C.
2.反转录2. Reverse transcription
取1μg总RNA,加Oligd(T)0.5μL,补充RNase-free water至总体积为6μL。Take 1 μg of total RNA, add 0.5 μL of Oligd(T), and supplement RNase-free water to a total volume of 6 μL.
65℃水浴中放置5min,稍离心后在管中配置下列反转录反应液。Place in a water bath at 65°C for 5 minutes, centrifuge slightly and prepare the following reverse transcription reaction solution in the tube.
42℃保温1h后,70℃处理15min,冰上冷却即可。After incubation at 42°C for 1 hour, treat at 70°C for 15 minutes and cool on ice.
3.利用Phusion高保真DNA聚合酶进行PCR扩增3. PCR amplification using Phusion high-fidelity DNA polymerase
(1)取0.2mL PCR专用管,依次加入以下成分:(1) Take a 0.2mL PCR tube and add the following ingredients in sequence:
(2)封闭PCR管,放入PCR仪中。反应条件为:98℃预变性2min,98℃变性20s,根据引物的退火温度退火20s,72℃延伸30s/Kb,循环30次,72℃后延伸10min。(2) Close the PCR tube and put it into the PCR machine. The reaction conditions were: pre-denaturation at 98°C for 2 min, denaturation at 98°C for 20 s, annealing for 20 s according to the annealing temperature of the primers, extension at 72°C for 30 s/Kb, 30 cycles, and extension at 72°C for 10 min.
(3)反应完毕后,在1%琼脂糖凝胶中电泳,检查扩增效果。PCR产物琼脂糖凝胶电泳检测结果如图2所示,在3792bp处可以观察到清晰的目的条带。(3) After the reaction is completed, perform electrophoresis on a 1% agarose gel to check the amplification effect. The results of PCR product agarose gel electrophoresis are shown in Figure 2, and a clear target band can be observed at 3792bp.
实施例2Example 2
克隆载体pENTR 3C-FIPV的构建Construction of Cloning Vector pENTR 3C-FIPV
1.PCR扩增FIPV基因CDS并与pENTR 3C连接1. PCR amplification of FIPV gene CDS and connection with pENTR 3C
F(正向引物):5’-CGGGGTACCATGGAAGAGGACGATGAG-3’;F (forward primer): 5'-CGGGGTACCATGGAAGAGGACGATGAG-3';
R(反向引物):5’-CCGCTCGAG TCATCCCACACATACTCT-3’;R (reverse primer): 5'-CCGCTCGAG TCATCCCACACATACTCT-3';
以提取的cDNA为模板,通过特异性引物F和R进行PCR扩增,并在目的基因上游和下游分别引入Kpn I和Xho I酶切位点。用天根(北京)胶回收试剂盒回收PCR产物,PCR产物与Gateway兼容的pENTR 3C进行酶切连接,操作步骤按下表进行。Using the extracted cDNA as a template, PCR amplification was performed with specific primers F and R, and Kpn I and Xho I restriction sites were introduced upstream and downstream of the target gene, respectively. Use the Tiangen (Beijing) Gel Recovery Kit to recover the PCR product, and perform enzyme digestion and ligation of the PCR product with Gateway-compatible pENTR 3C. The operation steps are as follows.
混匀后,室温(25℃)下反应30分钟,然后冰浴1分钟,用于转化大肠杆菌DH5α,表面涂含有卡那霉素的LB培养平板,37℃培养12小时。然后,挑取单个白色克隆涂布新的含有卡那霉素的LB培养平板,37℃培养12小时,进行菌落PCR扩增,如图3所示。同时,将筛菌正确的菌株送上海生工公司进行DNA测序。DNAMAN软件将测序序列与拟南芥FIPV基因启动子序列进行比对,比对正确后说明克隆载体pENTR 3C-FIPV构建成功,提取阳性质粒备用。质粒的提取使用北京康维公司试剂盒,按说明书步骤进行。After mixing, react at room temperature (25°C) for 30 minutes, then ice-bath for 1 minute to transform Escherichia coli DH5α, coat the surface with an LB culture plate containing kanamycin, and incubate at 37°C for 12 hours. Then, a single white clone was picked and spread on a new LB culture plate containing kanamycin, cultured at 37° C. for 12 hours, and colony PCR amplification was performed, as shown in FIG. 3 . At the same time, the correct bacterial strains were sent to Shanghai Sangong Company for DNA sequencing. The DNAMAN software compared the sequencing sequence with the promoter sequence of the Arabidopsis FIPV gene. After the comparison was correct, it indicated that the cloning vector pENTR 3C-FIPV was successfully constructed, and the positive plasmid was extracted for future use. The extraction of the plasmid was carried out according to the instruction manual using kits from Beijing Kangwei Company.
(1)取1-5mL过夜培养的菌液,加入离心管中,12000rpm离心1min,尽量吸弃上清。(1) Take 1-5 mL of overnight cultured bacterial solution, add it to a centrifuge tube, centrifuge at 12,000 rpm for 1 min, and discard the supernatant as much as possible.
(2)向留有菌体沉淀的离心管中加入250μLBuffer P1,使用移液器或涡旋振荡器彻底悬浮细菌沉淀。注意:如果菌块未彻底混匀,将会影响裂解效果,使提取量和纯度偏低。(2) Add 250 μL Buffer P1 to the centrifuge tube with the bacterial pellet left, and use a pipette or a vortex shaker to thoroughly suspend the bacterial pellet. Note: If the bacterial block is not thoroughly mixed, the lysis effect will be affected, resulting in low extraction volume and purity.
(3)向离心管中加入250μL Buffer P2,温和地上下颠倒混匀4-6次,使菌体充分裂解,此时菌液应变得清亮粘稠。所用时间不应超过5min,以免质粒受到破坏。(3) Add 250 μL Buffer P2 to the centrifuge tube, and gently mix it up and down 4-6 times to fully lyse the bacteria. At this time, the bacteria solution should become clear and viscous. The time used should not exceed 5 minutes to avoid damage to the plasmid.
(4)向离心管中加入350μL Buffer N3,立即温和地上下颠倒混匀4-6次,此时将出现白色絮状沉淀,12000rpm离心10min,此时在离心管底部形成沉淀。(4) Add 350 μL Buffer N3 to the centrifuge tube, and immediately mix it up and down gently for 4-6 times. At this time, a white flocculent precipitate will appear. Centrifuge at 12,000 rpm for 10 minutes, and a precipitate will form at the bottom of the centrifuge tube.
(5)柱平衡:向已装入吸附柱(Spin Column)的收集管中加入200μL Buffer PS,12000rpm离心2min,倒掉收集管中的废液,将吸附柱重新放回收集管中。(5) Column equilibration: Add 200 μL Buffer PS to the collection tube loaded with the spin column, centrifuge at 12000 rpm for 2 min, discard the waste liquid in the collection tube, and put the spin column back into the collection tube.
(6)将步骤4中所得上清加入到已装入吸附柱的收集管中,注意不要吸出沉淀,12000rpm离心1min,倒掉收集管中的废液,将吸附柱放回收集管中。(6) Add the supernatant obtained in step 4 into the collection tube that has been loaded into the adsorption column, be careful not to suck out the precipitate, centrifuge at 12000rpm for 1min, discard the waste liquid in the collection tube, and put the adsorption column back into the collection tube.
(7)向收集管中加入600μL Buffer PW,12000rpm离心1min,倒掉收集管中的废液。(7) Add 600 μL Buffer PW to the collection tube, centrifuge at 12000 rpm for 1 min, and discard the waste liquid in the collection tube.
(8)重复步骤7。(8) Repeat step 7.
(9)将吸附柱重新放回收集管中,12000rpm离心1min,倒掉收集管中的废液。将吸附柱置于室温数分钟,以彻底晾干。(9) Put the adsorption column back into the collection tube, centrifuge at 12000 rpm for 1 min, and discard the waste liquid in the collection tube. Allow the column to dry completely at room temperature for several minutes.
(10)将吸附柱置于一个新的离心管中,向吸附膜的中间部位悬空滴加50-100μLBuffer EB,室温放置数分钟,12000rpm离心1min,将质粒溶液收集到离心管中。-20℃保存质粒。(10) Put the adsorption column in a new centrifuge tube, add 50-100μL Buffer EB dropwise to the middle of the adsorption membrane, let it stand at room temperature for several minutes, centrifuge at 12000rpm for 1min, and collect the plasmid solution into the centrifuge tube. Store plasmids at -20°C.
实施例3Example 3
植物表达载体pMDC 83-FIPV的构建Construction of Plant Expression Vector pMDC 83-FIPV
将测序正确的克隆载体pENTR 3C-FIPV与含有35S启动子和GFP报告基因的pMDC83进行LR进行反应,得到35S启动子驱动的FIPV基因融合GFP报告基因的植物表达载体。LR反应体系如下:克隆载体1μL(约100ng)载体,pMDC83载体1μL(约100ng),LR克隆酶0.5μL。将上述物质混匀后置于室温(25℃)反应1-2小时,转化大肠杆菌DH5α。转化的菌株表面涂含有卡那霉素的LB培养平板,37℃培养12小时。然后,挑取单个白色克隆涂布新的含有卡那霉素的LB培养平板,37℃培养12小时,进行菌落PCR扩增,如图4所示。说明表达载体pMDC 83-FIPV构建成功,提取阳性质粒备用,提取方法如实施例2所述。The sequenced correct cloning vector pENTR 3C-FIPV was subjected to LR reaction with pMDC83 containing 35S promoter and GFP reporter gene to obtain a plant expression vector of 35S promoter-driven FIPV gene fused with GFP reporter gene. The LR reaction system is as follows: 1 μL (about 100 ng) of the cloning vector, 1 μL (about 100 ng) of the pMDC83 vector, and 0.5 μL of LR cloning enzyme. The above substances were mixed and then placed at room temperature (25° C.) to react for 1-2 hours to transform Escherichia coli DH5α. The surface of the transformed strain was coated with an LB culture plate containing kanamycin, and cultured at 37°C for 12 hours. Then, a single white clone was picked and spread on a new LB culture plate containing kanamycin, cultured at 37° C. for 12 hours, and colony PCR amplification was performed, as shown in FIG. 4 . It shows that the expression vector pMDC 83-FIPV is constructed successfully, and the positive plasmid is extracted for future use. The extraction method is as described in Example 2.
实施例4Example 4
FIPV过表达的拟南芥转基因株系构建Construction of transgenic lines of Arabidopsis thaliana overexpressed with FIPV
1.根癌农杆菌GV3101感受态细胞的制备与转化1. Preparation and transformation of Agrobacterium tumefaciens GV3101 competent cells
农杆菌感受态细胞的制备方法如下所示:The preparation method of Agrobacterium competent cells is as follows:
(1)挑取单菌落GV3101,接种于5mL YEP液体培养基中,28℃,200rpm过夜培养。(1) Pick a single colony GV3101, inoculate it in 5 mL of YEP liquid medium, and cultivate overnight at 28°C and 200 rpm.
(2)取2mL培养物至50mL液体YEP中,继续培养至OD600为0.5左右。(2) Take 2 mL of the culture into 50 mL of liquid YEP and continue culturing until the OD600 is about 0.5.
(3)将培养物冰浴30min,4℃,5000rpm,离心5min。(3) Place the culture in an ice bath for 30 min, centrifuge at 5000 rpm at 4°C for 5 min.
(4)弃去上清,10mL 0.1mol/L冷的NaCl悬浮菌体;4℃,5000rpm,离心5min。(4) Discard the supernatant, and suspend the bacteria in 10 mL of 0.1 mol/L cold NaCl; centrifuge at 5000 rpm at 4°C for 5 min.
(5)弃上清,沉淀用1mL 20mmol/L冷的CaCl2悬浮,分装成200μL/管,液氮中冷冻后-70℃保存。(5) Discard the supernatant, suspend the precipitate with 1 mL of 20 mmol/L cold CaCl2, aliquot into 200 μL/tube, freeze in liquid nitrogen and store at -70 °C.
表达载体转化农杆菌采用冻融法,转化过程如下:The expression vector was transformed into Agrobacterium by freeze-thaw method, and the transformation process was as follows:
(1)从-80℃取出GV3101感受态细胞(250μL),冰上解冻,立即加入1-2μL质粒DNA。(1) Take out GV3101 competent cells (250 μL) from -80°C, thaw on ice, and immediately add 1-2 μL of plasmid DNA.
(2)冰上静置5min。(2) Stand on ice for 5 minutes.
(3)液氮中冷冻5min。(3) Freeze in liquid nitrogen for 5 minutes.
(4)37℃水浴热激5min。(4) Heat shock in a water bath at 37°C for 5 minutes.
(5)加入无抗生素的YEP液体培养基1mL,28℃摇床培养2-4h。(5) Add 1 mL of YEP liquid medium without antibiotics, and incubate on a shaker at 28°C for 2-4 hours.
(6)4000rpm室温离心5min,收集菌体,用80-100μLYEP溶液重新悬浮菌体。(6) Centrifuge at room temperature for 5 minutes at 4000 rpm, collect the cells, and resuspend the cells with 80-100 μL of YEP solution.
(7)将菌液均匀涂布于YEP固体选择培养基,28℃静置培养2-3天。(7) Evenly spread the bacterial liquid on the YEP solid selection medium, and culture it statically at 28°C for 2-3 days.
(8)长出菌落后,挑取单菌落重新划线于含抗生素的YEP固体平板上,36h后进行菌落PCR鉴定,结果如图5所示。(8) After the colony grows, pick a single colony and re-streak it on the YEP solid plate containing antibiotics, and perform colony PCR identification after 36 hours, and the results are shown in Figure 5.
2.拟南芥的转化2. Transformation of Arabidopsis
拟南芥的遗传转化采用花序浸染法,方法如下:The genetic transformation of Arabidopsis thaliana adopts the inflorescence dipping method, and the method is as follows:
(1)将拟南芥的主花序的剪掉,以诱导侧花序的生成,且侧花序同时开花,便于转化。转化前将材料浇透营养液,转化后要控制浇水或营养液,以便于种子及时成熟。(1) The main inflorescence of Arabidopsis was cut off to induce the formation of side inflorescences, and the side inflorescences bloomed at the same time to facilitate transformation. Water the nutrient solution thoroughly before transformation, and control watering or nutrient solution after transformation, so that the seeds can mature in time.
(2)提前一天准备好转化所需要用的农杆菌,取2-5mL过夜培养的菌液加到250mL的培养基中摇床培养,以便于第二天可用于转化拟南芥。(2) Prepare the Agrobacterium needed for transformation one day in advance, take 2-5 mL of overnight cultured bacterial solution and add it to 250 mL medium for shaking culture, so that it can be used for transformation of Arabidopsis the next day.
(3)收集过夜培养的农杆菌菌体,重新悬浮于50-100mL浸染液中。(3) Collect the Agrobacterium cells cultivated overnight, and resuspend them in 50-100mL dipping solution.
(4)将拟南芥伸长的种荚和已经开放的花全部剪掉后,将花絮浸入浸染液中,上下晃动花絮,以利于浸染液的进入。浸染时间一般持续1h左右。将浸染后的拟南芥平放入大盆中,薄膜覆盖以保湿,同时外罩黑色薄膜避光。黑暗处理后后将拟南芥取出置于光下,待成熟后收种子。(4) After all the elongated seed pods and bloomed flowers of Arabidopsis thaliana were cut off, the flocs were immersed in the liquid for dyeing, and the flocs were shaken up and down to facilitate the entry of the liquid for dyeing. The dipping time generally lasts about 1 hour. Put the soaked Arabidopsis thaliana flat into a large pot, cover with a film to keep moisture, and at the same time cover with a black film to avoid light. After the dark treatment, the Arabidopsis thaliana was taken out and placed in the light, and the seeds were harvested after maturity.
拟南芥浸染液配方如下:The Arabidopsis thaliana liquid formulation is as follows:
用1M KOH调pH值至5.7。Adjust the pH to 5.7 with 1M KOH.
3.转基因株系的筛选3. Screening of transgenic lines
收集侵染后的拟南芥T0代种子,进行消毒处理,方法如下:Collect the Arabidopsis thaliana T0 generation seeds after infection, and carry out disinfection treatment, the method is as follows:
(1)取适量种子于1.5mL Eppendorf管中,标明相关信息;(1) Take an appropriate amount of seeds and place them in a 1.5mL Eppendorf tube, and indicate the relevant information;
(2)事先配置好70%乙醇,用移液器取1mL于管中,吸打混匀,使种子可以充分地接触乙醇溶液,静置处理5min(注意将管壁和管盖上的种子都冲洗下来以保证灭菌彻底),之后用1mL移液器将离心管内的乙醇吸出(注意不要将种子吸出);(2) Prepare 70% ethanol in advance, use a pipette to take 1mL into the tube, pipette and mix well, so that the seeds can fully contact the ethanol solution, and let it stand for 5 minutes (note that the seeds on the tube wall and the tube cover are all Rinse down to ensure complete sterilization), and then use a 1mL pipette to suck out the ethanol in the centrifuge tube (be careful not to suck out the seeds);
(3)吐温水冲洗一遍;(3) Rinse once with Tween water;
(4)用移液器取1mL 2.6%次氯酸钠溶液于管中,上下颠倒混匀,静置处理10min;(4) Use a pipette to take 1mL of 2.6% sodium hypochlorite solution in the tube, mix it upside down, and let it stand for 10 minutes;
(5)吐温水冲洗五遍;(5) Rinse with Tween water five times;
(6)置于4℃保存待用。(6) Store at 4°C until use.
转基因植株的筛选Screening of transgenic plants
将消毒后的T0代种子点播在含有50μg/mL潮霉素的MS固体培养基上,在植物专用培养室中生长7d,培养条件为22℃,长日照(16h光照/8h黑暗)。在T1代中挑选能够在潮霉素MS平板上萌发和生长的植株,分别转移到蛭石上培养,培养条件同上。The sterilized T0 generation seeds were inoculated on MS solid medium containing 50 μg/mL hygromycin, and grown for 7 days in a plant-specific cultivation room under the conditions of 22°C and long daylight (16h light/8h dark). Select the plants that can germinate and grow on the hygromycin MS plate in the T1 generation, and transfer them to the vermiculite for culture, and the culture conditions are the same as above.
收集T1代种子,按上述方法消毒,点播在含有50μg/mL潮霉素的MS固体培养基上,在植物专用培养室中生长7d,培养条件为22℃,长日照(16h光照/8h黑暗)。在T2代中挑选能够在潮霉素MS平板上萌发和生长的植株,分别转移到蛭石上培养,培养条件同上。Collect T1 generation seeds, sterilize according to the above method, sow on MS solid medium containing 50 μg/mL hygromycin, and grow for 7 days in a special cultivation room for plants. . Select the plants that can germinate and grow on the hygromycin MS plate in the T2 generation, and transfer them to the vermiculite for culture, and the culture conditions are the same as above.
收集T2代种子,按上述方法消毒,点播在含有50μg/mL潮霉素的MS固体培养基上,在植物专用培养室中生长7d,培养条件为22℃,长日照(16h光照/8h黑暗)。在T3代中挑选能够在潮霉素MS平板上全部萌发和生长且不出现分离的植株,得到过量表达系OE31和OE51。Collect T2 generation seeds, sterilize according to the above method, sow on MS solid medium containing 50 μg/mL hygromycin, and grow in a plant-specific cultivation room for 7 days. . In the T3 generation, the plants that could germinate and grow completely on the hygromycin MS plate without segregation were selected to obtain the overexpression lines OE31 and OE51.
实施例5Example 5
FIPV过表达的拟南芥转基因株系中FIPV表达量检测Detection of FIPV expression in Arabidopsis transgenic lines with FIPV overexpression
利用实时荧光定量PCR(qRT-PCR)检测FIPV过表达的转基因拟南芥株系OE31和OE51中FIPV的表达量。The expression of FIPV in transgenic Arabidopsis lines OE31 and OE51 with FIPV overexpression was detected by real-time fluorescent quantitative PCR (qRT-PCR).
将在OE31和OE51中提取的RNA进行反转录后得到的cDNA样品稀释至0.5-2ng/μL,反应体系如下表所示:Dilute the cDNA samples obtained after reverse transcription of the RNA extracted in OE31 and OE51 to 0.5-2ng/μL, and the reaction system is shown in the following table:
封闭PCR管,放入荧光定量PCR仪中(ABI7500FAST)。反应条件为:先50℃预变性20s,再95℃预变性10s,再95℃变性15s,60℃退火1min,之后进行plate read,从步骤3开始循环40次,溶解曲线为95℃15s,60℃1min,95℃30s,60℃15s。Close the PCR tube and put it into a fluorescent quantitative PCR instrument (ABI7500FAST). The reaction conditions are: pre-denaturation at 50°C for 20s, then pre-denaturation at 95°C for 10s, denaturation at 95°C for 15s, annealing at 60°C for 1min, and then plate read, cycle 40 times from step 3, and the melting curve is 95°C for 15s, 60°C 1min at ℃, 30s at 95℃, 15s at 60℃.
反应以tublin2作为内参基因以保证结果的准确性,每个处理有三次生物学重复,三个系统重复。FIPV过量表达系OE31和OE51中FIPV的表达量如图6所示,结果表明OE31和OE51中FIPV的表达量显著高于野生型和突变体,FIPV在过量表达系中可以高效表达。The reaction used tublin2 as an internal reference gene to ensure the accuracy of the results. Each treatment had three biological repetitions and three systematic repetitions. The expression levels of FIPV in the FIPV overexpression lines OE31 and OE51 are shown in Figure 6. The results showed that the expression levels of FIPV in OE31 and OE51 were significantly higher than those in the wild type and mutants, and FIPV could be highly expressed in the overexpression lines.
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