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CN110157721A - A tracer targeting plasmid of vaccinia virus Tiantan strain and preparation method thereof - Google Patents

A tracer targeting plasmid of vaccinia virus Tiantan strain and preparation method thereof Download PDF

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CN110157721A
CN110157721A CN201910012569.2A CN201910012569A CN110157721A CN 110157721 A CN110157721 A CN 110157721A CN 201910012569 A CN201910012569 A CN 201910012569A CN 110157721 A CN110157721 A CN 110157721A
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马茜
汪洋
徐文
郭红霞
刘梅
李怡萱
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Abstract

本发明公开了一种痘苗病毒天坛株的示踪打靶质粒,包括痘苗病毒天坛株TK基因的上游同源重组臂VTT‑TKL和下游同源重组臂VTT‑TKR,上游同源重组臂VTT‑TKL和下游同源重组臂VTT‑TKR间插入Luciferase报告基因和EGFP绿色荧光蛋白标记基因,Luciferase报告基因和EGFP绿色荧光蛋白标记基因由启动子P7.5启动表达。本发明还公开了该痘苗病毒天坛株的示踪打靶质粒的制备方法。本发明一种痘苗病毒天坛株的示踪打靶质粒,能够靶向去除痘苗病毒天坛株中的TK基因,制备出去除TK基因的重组天坛株病毒。

The invention discloses a tracer targeting plasmid of the Tiantan strain of vaccinia virus, comprising an upstream homologous recombination arm VTT‑TKL, a downstream homologous recombination arm VTT‑TKR, and an upstream homologous recombination arm VTT‑TKL of the TK gene of the vaccinia virus Tiantan strain. The Luciferase reporter gene and EGFP green fluorescent protein marker gene are inserted between the downstream homologous recombination arm VTT-TKR, and the Luciferase reporter gene and EGFP green fluorescent protein marker gene are expressed by the promoter P7.5. The invention also discloses a preparation method of the tracer targeting plasmid of the vaccinia virus Tiantan strain. The invention discloses a tracer targeting plasmid of the Tiantan strain of vaccinia virus, capable of targeting and removing the TK gene in the Tiantan strain of the vaccinia virus, and preparing a recombinant Tiantan strain virus with the TK gene removed.

Description

一种痘苗病毒天坛株的示踪打靶质粒及其制备方法A tracer targeting plasmid of vaccinia virus Tiantan strain and preparation method thereof

技术领域technical field

本发明属于生物基因工程技术领域,涉及一种痘苗病毒天坛株的示踪打 靶质粒,本发明还涉及该痘苗病毒天坛株的示踪打靶质粒的制备方法。The invention belongs to the technical field of biological genetic engineering, and relates to a tracer targeting plasmid of the Tiantan strain of vaccinia virus, and also relates to a preparation method of the tracer targeting plasmid of the Tiantan strain of vaccinia virus.

背景技术Background technique

痘苗病毒天坛株(Vaccinia virus Tian Tan,VTT)是我国特有的疫苗株, 为了提高痘苗病毒天坛株VTT的溶瘤效力,需借助相应的打靶质粒。胸苷 激酶TK可为病毒DNA复制提供高水平的核苷酸池,正常细胞中TK水平 较低,去除病毒TK基因使病毒更倾向于在肿瘤细胞中复制,不能早在正常 细胞中复制,因此去除VTT的TK基因可提高病毒的肿瘤选择性。目前针对 痘苗病毒天坛株的打靶质粒主要用于预防传染性疾病,用于抗肿瘤应用的较少。这些打靶质粒要么缺乏示踪报告基因,要么缺乏荧光筛选标记,以此形 成的重组VTT病毒要么无法示踪,要么示踪能力较弱,要么较难筛选,因 此无法满足当前减毒溶瘤痘苗病毒研究的需要。Vaccinia virus Tian Tan (VTT) strain is a unique vaccine strain in my country. In order to improve the oncolytic efficacy of vaccinia virus Tian Tan strain VTT, the corresponding targeting plasmid is needed. Thymidine kinase TK can provide a high level of nucleotide pool for viral DNA replication, and the level of TK in normal cells is low. Removing the viral TK gene makes the virus more inclined to replicate in tumor cells and cannot replicate in normal cells earlier, so Removing the TK gene of VTT improves the tumor selectivity of the virus. At present, targeting plasmids targeting the Tiantan strain of vaccinia virus are mainly used for the prevention of infectious diseases, and are rarely used for anti-tumor applications. These targeting plasmids either lack a tracer reporter gene or a fluorescent selection marker, and the resulting recombinant VTT virus is either unable to be traced, or has a weak traceability, or is difficult to screen, so it cannot meet the requirements of the current attenuated oncolytic vaccinia virus. research needs.

发明内容Contents of the invention

本发明的目的是提供一种痘苗病毒天坛株的示踪打靶质粒,能够靶向去 除痘苗病毒天坛株TK基因,并使其携带示踪标记基因,制备出去除TK基 因的具有示踪能力的重组天坛株病毒。The purpose of the present invention is to provide a tracer targeting plasmid of vaccinia virus Tiantan strain, which can target and remove the TK gene of vaccinia virus Tiantan strain, and make it carry a tracer marker gene, and prepare a recombination with traceability that removes the TK gene Tiantan strain virus.

本发明另一个目的是提供一种痘苗病毒天坛株的示踪打靶质粒的制备 方法。Another object of the present invention is to provide a method for preparing a tracer targeting plasmid of vaccinia virus Tiantan strain.

本发明所采用的技术方案是,一种痘苗病毒天坛株的示踪打靶质粒,包 括痘苗病毒天坛株TK基因的上游同源重组臂VTT-TKL和下游同源重组臂 VTT-TKR,上游同源重组臂VTT-TKL和下游同源重组臂VTT-TKR间插入 EGFP绿色荧光蛋白标记基因,EGFP绿色荧光蛋白标记基因由启动子P7.5 启动表达。The technical solution adopted in the present invention is a tracer targeting plasmid of the Tiantan strain of vaccinia virus, including the upstream homologous recombination arm VTT-TKL and the downstream homologous recombination arm VTT-TKR of the TK gene of the vaccinia virus Tiantan strain. The EGFP green fluorescent protein marker gene was inserted between the recombination arm VTT-TKL and the downstream homologous recombination arm VTT-TKR, and the expression of the EGFP green fluorescent protein marker gene was driven by the promoter P7.5.

本发明第一种技术方案的特点还在于:The feature of the first technical solution of the present invention is also:

打靶质粒还包括Luciferase报告基因,Luciferase报告基因也位于上游 同源重组臂VTT-TKL和下游同源重组臂VTT-TKR之间,Luciferase报告基 因由启动子P7.5启动表达,打靶质粒的核苷酸序列如序列表1所示。The targeting plasmid also includes a Luciferase reporter gene. The Luciferase reporter gene is also located between the upstream homologous recombination arm VTT-TKL and the downstream homologous recombination arm VTT-TKR. The Luciferase reporter gene is expressed by the promoter P7.5, and the nucleoside of the targeting plasmid The acid sequences are shown in Sequence Table 1.

打靶质粒的出发载体pMV-VTTTK-Luc。The departure vector of the targeting plasmid is pMV-VTTTK-Luc.

本发明采用的另一种技术方案是:Another kind of technical scheme that the present invention adopts is:

一种痘苗病毒天坛株的示踪打靶质粒的制备方法,具体按照下述步骤进 行:A method for preparing a tracer targeting plasmid of vaccinia virus Tiantan strain, specifically carried out according to the following steps:

步骤1,构建荧光标记示踪基因片段E-Luc片段,E-Luc片段的核苷酸 序列如序列表2所示;Step 1, construct the fluorescent marker tracer gene fragment E-Luc fragment, the nucleotide sequence of the E-Luc fragment is as shown in Sequence Table 2;

步骤2,将所述E-Luc片段用酶切连接的方法连接至pMV-VTTTK-Luc 质粒中,得到痘苗病毒天坛株的示踪打靶质粒。In step 2, the E-Luc fragment was ligated into the pMV-VTTTK-Luc plasmid by restriction endonuclease ligation to obtain a tracer targeting plasmid of the Tiantan strain of vaccinia virus.

本发明另一种技术方案的特点还在于:The feature of another kind of technical scheme of the present invention is also in:

步骤1具体按照下述方法进行:Step 1 is specifically carried out as follows:

步骤1.1,以pEGFP-Luc质粒为模板,根据Luciferase报告基因和EGFP 绿色荧光蛋白标记基因的融合序列,设计引物;Step 1.1, using the pEGFP-Luc plasmid as a template, design primers according to the fusion sequence of the Luciferase reporter gene and the EGFP green fluorescent protein marker gene;

步骤1.2,在引物的一端添加酶切位点EcoRI,在所述引物的另一端酶 切位点XmaI,得到合成引物;Step 1.2, adding a restriction site EcoRI at one end of the primer, and a restriction site XmaI at the other end of the primer to obtain a synthetic primer;

步骤1.3,以pEGFP-Luc质粒为模板,以步骤2得到的序列为引物,经PCR扩增后,得到光标记示踪基因片段E-Luc片段。In step 1.3, the pEGFP-Luc plasmid is used as a template, and the sequence obtained in step 2 is used as a primer. After PCR amplification, the light-labeled tracer gene fragment E-Luc fragment is obtained.

步骤1.2中的合成引物为:The synthetic primers in step 1.2 are:

ELuc-F:5’-GGAATTCGCCACCATGGAAGACGCCA-3’ELuc-F: 5'-GGAATTCGCCACCATGGAAGACGCCA-3'

ELuc-R:5’-TCCCCCCGGGTTACTTGTACAGCTCGTCCATG-3。ELuc-R: 5'-TCCCCCCGGGTTACTTGTACAGCTCGTCCATG-3.

步骤1.3中,PCR反应体系为:DNA 1μl,dNTP mix(2.5mM)1μl,正向 引物(10μM)2μl,反向引物(10μM)2μl,5×PrimeSTAR buffer 10μl, PrimeSTAR HS DNA聚合酶0.5μl,加DEPC水至50μl。In step 1.3, the PCR reaction system is: DNA 1 μl, dNTP mix (2.5mM) 1 μl, forward primer (10 μM) 2 μl, reverse primer (10 μM) 2 μl, 5×PrimeSTAR buffer 10 μl, PrimeSTAR HS DNA polymerase 0.5 μl, Add DEPC water to 50 μl.

PCR反应条件为:98℃预变性30s;98℃变性10s,55-60℃退火15s, 72℃延伸1min/kb,循环30次;72℃延伸5分钟,最后置于4℃保存;The PCR reaction conditions are: pre-denaturation at 98°C for 30s; denaturation at 98°C for 10s, annealing at 55-60°C for 15s, extension at 72°C for 1min/kb, cycled 30 times; extension at 72°C for 5 minutes, and finally stored at 4°C;

PCR片段回收:PCR产物经琼脂糖凝胶电泳,切胶回收E-Luc片段。PCR fragment recovery: PCR products were subjected to agarose gel electrophoresis, and the E-Luc fragment was recovered by cutting the gel.

步骤2具体按照下述步骤进行:Step 2 is specifically carried out in accordance with the following steps:

步骤2.1,将pMV-VTTTK-Luc质粒经EcoRI/XmaI双酶切,凝胶电泳回 收大片段作为载体;Step 2.1, the pMV-VTTTK-Luc plasmid is digested with EcoRI/XmaI, and the large fragment is recovered by gel electrophoresis as a carrier;

将E-Luc片段进过EcoRI/XmaI双酶切,然后纯化回收获得连接片段;The E-Luc fragment was subjected to EcoRI/XmaI double digestion, and then purified and recovered to obtain the ligated fragment;

步骤2.2,将载体和连接片段进行连接、转化,得到痘苗病毒天坛株的 示踪打靶质粒。In step 2.2, the vector and the ligated fragment are ligated and transformed to obtain the tracer targeting plasmid of the Tiantan strain of vaccinia virus.

步骤2.2中将载体和连接片段按照分子克隆技术进行连接、转化。In step 2.2, the vector and the connected fragments are connected and transformed according to the molecular cloning technique.

本发明的有益效果是:The beneficial effects of the present invention are:

本发明一种痘苗病毒天坛株的示踪打靶质粒,能够靶向去除痘苗病毒天 坛株中的TK基因,制备出去除TK基因的具有示踪能力的重组天坛株病毒;The tracer targeting plasmid of a kind of vaccinia virus Tiantan strain of the present invention can be targeted to remove the TK gene in the vaccinia virus Tiantan strain, and prepare the recombinant Tiantan strain virus with traceability that removes the TK gene;

本发明一种痘苗病毒天坛株的示踪打靶质粒,EGFP绿色荧光蛋白标记 可用于筛选重组病毒;Luciferase报告基因可通过催化荧光素产生生物荧光, 发挥示踪功能,用于分析溶瘤VTT病毒在体内的分布情况,尤其在肿瘤中 的分布,为痘苗病毒作为载体研发活疫苗及肿瘤生物治疗提供了良好工具。A tracer targeting plasmid of the Tiantan strain of vaccinia virus of the present invention, EGFP green fluorescent protein marker can be used to screen recombinant viruses; Luciferase reporter gene can generate bioluminescence by catalyzing fluorescein, and play a tracer function, which is used to analyze oncolytic VTT virus in The distribution in the body, especially in tumors, provides a good tool for vaccinia virus as a carrier to develop live vaccines and tumor biotherapy.

附图说明Description of drawings

图1是本发明一种痘苗病毒天坛株的示踪打靶质粒的质粒图谱;Fig. 1 is the plasmid map of the tracer targeting plasmid of a kind of vaccinia virus Tiantan strain of the present invention;

图2是E-Luc片段PCR扩增产物凝胶电泳结果;Fig. 2 is the gel electrophoresis result of PCR amplification product of E-Luc fragment;

图3是载体pMV-VTTTK-Luc质粒的结构示意图;Fig. 3 is the structural representation of carrier pMV-VTTTK-Luc plasmid;

图4是本发明一种痘苗病毒天坛株的示踪打靶质粒的酶切鉴定结果;Fig. 4 is the enzyme digestion identification result of the tracer targeting plasmid of a kind of vaccinia virus Tiantan strain of the present invention;

图5-图8是本发明一种痘苗病毒天坛株的示踪打靶质粒的测序鉴定结 果。Fig. 5-Fig. 8 is the sequence identification result of the tracer targeting plasmid of a kind of vaccinia virus Tiantan strain of the present invention.

具体实施方式Detailed ways

下面结合附图和具体实施方式对本发明进行详细说明。The present invention will be described in detail below in conjunction with the accompanying drawings and specific embodiments.

本发明所使用的材料、试剂,如无特殊说明,均可从商业途径获得。The materials and reagents used in the present invention can be obtained from commercial sources unless otherwise specified.

本发明中野生痘苗病毒天坛株的基因组DNA序列为GenBank号为 AF095689.1的序列(VRL 14-FEB-2000)。痘苗病毒天坛株在西安医学院分 子病毒与病毒免疫学实验室(本实验室,下同)保藏。质粒pEGFP-Luc和 pMV-VTTTK-Luc由本实验室保藏。The genomic DNA sequence of the wild vaccinia virus Tiantan strain in the present invention is the sequence (VRL 14-FEB-2000) of GenBank number AF095689.1. The Tiantan strain of vaccinia virus was preserved in the Laboratory of Molecular Virology and Viral Immunology of Xi'an Medical College (this laboratory, the same below). Plasmids pEGFP-Luc and pMV-VTTTK-Luc are preserved by our laboratory.

一,一种痘苗病毒天坛株的示踪打靶质粒,如图1所示,包括 pMV-VTTTK-ELuc质粒,pMV-VTTTK-Luc质粒插入有痘苗病毒天坛株TK 基因的上游同源重组臂VTT-TKL和下游同源重组臂VTT-TKR,上游同源 重组臂VTT-TKL和下游同源重组臂VTT-TKR间插入EGFP绿色荧光蛋白标 记基因和Luciferase报告基因,EGFP绿色荧光蛋白标记基因和Luciferase报告基因均由痘苗病毒启动子P7.5启动表达。One, a tracer targeting plasmid of the vaccinia virus Tiantan strain, as shown in Figure 1, includes the pMV-VTTTK-ELuc plasmid, and the pMV-VTTTK-Luc plasmid is inserted into the upstream homologous recombination arm VTT- Insert EGFP green fluorescent protein marker gene and Luciferase reporter gene between TKL and downstream homologous recombination arm VTT-TKR, upstream homologous recombination arm VTT-TKL and downstream homologous recombination arm VTT-TKR, EGFP green fluorescent protein marker gene and Luciferase reporter All the genes were expressed by vaccinia virus promoter P7.5.

本发明一种痘苗病毒天坛株的示踪打靶质粒,同源臂VTT-TKL和 VTT-TKR与VTT的TK基因两侧的序列发生同源重组,形成敲除TK基因、 表达Luciferase和EGFP的重组VTT病毒。EGFP荧光标记可用于筛选重组 病毒;Luciferase通过催化荧光素产生生物荧光,发挥示踪功能以确定病毒 在体内的分布情况。A tracer targeting plasmid of the Tiantan strain of vaccinia virus of the present invention, the homologous arms VTT-TKL and VTT-TKR undergo homologous recombination with the sequences on both sides of the TK gene of VTT to form a recombination that knocks out the TK gene and expresses Luciferase and EGFP VTT virus. EGFP fluorescent labeling can be used to screen recombinant viruses; Luciferase catalyzes fluorescein to produce bioluminescence, and plays a tracing function to determine the distribution of viruses in vivo.

二,一种痘苗病毒天坛株的示踪打靶质粒的制备方法,按照下述步骤进 行:Two, a kind of preparation method of the tracer targeting plasmid of vaccinia virus Tiantan strain, carry out according to the following steps:

步骤1,构建荧光标记示踪基因片段E-Luc片段;Step 1, constructing a fluorescently labeled tracer gene fragment E-Luc fragment;

步骤1.1,以pEGFP-Luc质粒为模板,根据Luciferase和EGFP融合基 因的融合序列,设计引物;Step 1.1, using the pEGFP-Luc plasmid as a template, according to the fusion sequence of Luciferase and EGFP fusion gene, design primers;

步骤1.2,在所引物的一端添加酶切位点EcoRI,在引物的另一端酶切 位点XmaI,得到合成引物,合成引物的序列信息如下:Step 1.2, add the enzyme cutting site EcoRI at one end of the primer, and the enzyme cutting site XmaI at the other end of the primer to obtain a synthetic primer. The sequence information of the synthetic primer is as follows:

ELuc-F:5’-GGAATTCGCCACCATGGAAGACGCCA-3’(下划线之前部 分为保护碱基,下划线部分为EcoRI内切酶识别序列,其后序列为序列2的 第1-19位)ELuc-F: 5'-G GAATTC GCCACCATGGAAGACGCCA-3' (the part before the underline is the protected base, the underline part is the EcoRI endonuclease recognition sequence, and the sequence after that is the 1-19th position of sequence 2)

ELuc-R:5’-TCCCCCCGGGTTACTTGTACAGCTCGTCCATG-3’(下划 线之前部分为保护碱基,下划线部分为XmaI内切酶识别序列,其后序列为 序列2的第2376-2397位的反向互补序列);ELuc-R: 5'-TCCC CCCGGG TTACTTGTACAGCTCGTCCATG-3' (the part before the underline is the protective base, the underline part is the XmaI endonuclease recognition sequence, and the sequence thereafter is the reverse complementary sequence of the 2376-2397th position of sequence 2) ;

步骤1.3,以pEGFP-Luc质粒为模板,经PCR扩增后,得到光标记示踪 基因片段E-Luc片段,E-Luc片段的基因序列见序列表2。In step 1.3, the pEGFP-Luc plasmid is used as a template, and after PCR amplification, the light-labeled tracer gene fragment E-Luc fragment is obtained, and the gene sequence of the E-Luc fragment is shown in Sequence Table 2.

PCR反应体系为:DNA 1μl,dNTP mix(2.5mM)1μl,正向引物(10μM) 2μl,反向引物(10μM)2μl,5×PrimeSTAR buffer 10μl,PrimeSTAR HS DNA 聚合酶0.5μl,加DEPC水至50μl。The PCR reaction system is: DNA 1μl, dNTP mix (2.5mM) 1μl, forward primer (10μM) 2μl, reverse primer (10μM) 2μl, 5×PrimeSTAR buffer 10μl, PrimeSTAR HS DNA polymerase 0.5μl, add DEPC water to 50 μl.

PCR反应条件为:98℃预变性30s;98℃变性10s,60℃退火15s,72℃ 延伸1min/kb,循环30次;72℃延伸5分钟,最后置于4℃保存;The PCR reaction conditions are: pre-denaturation at 98°C for 30s; denaturation at 98°C for 10s, annealing at 60°C for 15s, extension at 72°C for 1min/kb, and 30 cycles; extension at 72°C for 5 minutes, and finally stored at 4°C;

PCR片段回收:PCR产物经琼脂糖凝胶电泳,带酶切位点的E-Luc为2414bp,电泳结果见图2,切胶回收目的片段。PCR fragment recovery: The PCR product was subjected to agarose gel electrophoresis, and the E-Luc with the enzyme cutting site was 2414bp. The electrophoresis result is shown in Figure 2, and the target fragment was recovered by cutting the gel.

步骤2,将E-Luc片段酶切连接的方法连接至pMV-VTTTK-Luc质粒中, 得到痘苗病毒天坛株的示踪打靶质粒:Step 2. Ligate the E-Luc fragment into the pMV-VTTTK-Luc plasmid by enzyme-cut ligation to obtain the tracer targeting plasmid of the vaccinia virus Tiantan strain:

步骤2.1,将如图3所示的pMV-VTTTK-Luc质粒经EcoRI/XmaI双酶切, 凝胶电泳回收4197bp片段得到载体;In step 2.1, the pMV-VTTTK-Luc plasmid shown in Figure 3 was digested with EcoRI/XmaI, and the 4197bp fragment was recovered by gel electrophoresis to obtain the vector;

将E-Luc片段进过EcoRI/XmaI双酶切,纯化回收2403bp片段,得到连 接片段;The E-Luc fragment was subjected to EcoRI/XmaI double digestion, and the 2403bp fragment was purified and recovered to obtain the ligated fragment;

步骤2.2,将载体和连接片段经分子克隆技术进行连接、转化,得到痘 苗病毒天坛株的示踪打靶质粒。In step 2.2, the vector and the connecting fragment are ligated and transformed by molecular cloning techniques to obtain the tracer targeting plasmid of the Tiantan strain of vaccinia virus.

将本实施例得到的痘苗病毒天坛株的示踪打靶质粒进行酶切鉴定,鉴定 结果如图4所示,痘苗病毒天坛株的示踪打靶质粒经EcoRI/XmaI双酶切产 生4197bp片段和2403bp,与预期片段大小一致;The tracer targeting plasmid of the vaccinia virus Tiantan strain obtained in this example was digested and identified, and the identification results are shown in Figure 4. The tracer targeting plasmid of the vaccinia virus Tiantan strain was digested with EcoRI/XmaI to produce a 4197bp fragment and a 2403bp fragment. Consistent with the expected fragment size;

将本实施例得到的痘苗病毒天坛株的示踪打靶质粒进行基因序 列测定,如图5、图6、图7和图8所示,从图5、图6、图7和图8 中可知:显示基因序列没有发生变化,插入位置正确;因此,痘苗病 毒天坛株的示踪打靶质粒构建成功。The tracer targeting plasmid of the vaccinia virus Tiantan strain obtained in this embodiment is subjected to gene sequence determination, as shown in Fig. 5, Fig. 6, Fig. 7 and Fig. 8, as can be seen from Fig. 5, Fig. 6, Fig. 7 and Fig. 8: It showed that the gene sequence did not change, and the insertion position was correct; therefore, the tracer targeting plasmid of the vaccinia virus Tiantan strain was successfully constructed.

SEQUENCE LISTINGSEQUENCE LISTING

<110> 西安医学院<110> Xi'an Medical College

<120> 一种痘苗病毒天坛株的示踪打靶质粒及其制备方法<120> A tracer targeting plasmid of vaccinia virus Tiantan strain and its preparation method

<160> 2<160> 2

<210> 1<210> 1

<211> 6600<211> 6600

<212> DNA<212> DNA

<213> 人工序列<213> Artificial sequence

<400> 1<400> 1

aaaaataaac aaataggggt tccgcgcaca tttccccgaa aagtgccacc tgacgtctaa 60aaaaataaac aaataggggt tccgcgcaca tttccccgaa aagtgccacc tgacgtctaa 60

gaaaccatta ttatcatgac attaacctat aaaaataggc gtatcacgag gccctttcgt 120gaaaccatta ttatcatgac attaacctat aaaaataggc gtatcacgag gccctttcgt 120

tgtaaaacga cggccagtcg aaccacgcaa tgcgtctcga tccgcagtgt cttgcgtctc 180tgtaaaacga cggccagtcg aaccacgcaa tgcgtctcga tccgcagtgt cttgcgtctc 180

tttactgcag acagatattc cgacaaagga ttgattacta taaatggaga atgttcctaa 240tttactgcag acagatattc cgacaaagga ttgattacta taaatggaga atgttcctaa 240

tgtatacttt aatcctgtgt ttatagagcc cacgtttaaa cattctttat taagtgttta 300tgtatacttt aatcctgtgt ttatagagcc cacgtttaaa cattctttat taagtgttta 300

taaacacaga ttaatagttt tatttgaagt attcattgta ttcattctaa tatatgtatt 360taaacacaga ttaatagttttatttgaagt attcattgta ttcattctaa tatatgtatt 360

ttttagatct gaattaaata tgttcttcat gcctaaacga aaaatacccg atcctattga 420ttttagatct gaattaaata tgttcttcat gcctaaacga aaaatacccg atcctattga 420

tagattacga cgtgctaatc tagcgtgtga agacgataaa ttaatgatct atggattacc 480tagattacga cgtgctaatc tagcgtgtga agacgataaa ttaatgatct atggattacc 480

atggatgaca actcaaacat ctgcgttatc aataaatagt aaaccgatag tgtataaaga 540atggatgaca actcaaacat ctgcgttatc aataaatagt aaaccgatag tgtataaaga 540

ttgtgcaaag cttttgcgat caataaatgg atcacaacca gtatctctta acgatgttct 600ttgtgcaaag cttttgcgat caataaatgg atcacaacca gtatctctta acgatgttct 600

tcgcagatga tgattcattt tttaagtatt tggctagtca agatgatgaa tcttcattat 660tcgcagatga tgattcattt tttaagtatt tggctagtca agatgatgaa tcttcattat 660

ctgatatatt gcaaatcact caatatctag actttctgtt attattattg atccaatcaa 720ctgatatatt gcaaatcact caatatctag actttctgtt attattattg atccaatcaa 720

aaaataaatt agaagccgtg ggtcattgtt atgaatctct ttcagaggaa tacagacaat 780aaaataaatt agaagccgtg ggtcattgtt atgaatctct ttcagaggaa tacagacaat 780

tgacaaaatt cacagactct caagatttta aaaaactgtt taacaaggtc cctattgtta 840tgacaaaatt cacagactct caagatttta aaaaactgtt taacaaggtc cctattgtta 840

cagatggaag ggtcaaactt aataaaggat atttgttcga ctttgtgatt agtttgatgc 900cagatggaag ggtcaaactt aataaaggat atttgttcga ctttgtgatt agtttgatgc 900

gattcaaaaa agaatcctct ctagctacca ccgcaataga tcctattaga tacatagatc 960gattcaaaaa agaatcctct ctagctacca ccgcaataga tcctattaga tacatagatc 960

ctcgtcgcga tatcgcattt tctaacgtga tggatatatt aaagtcgaat aaagtgaaca 1020ctcgtcgcga tatcgcattt tctaacgtga tggatatatt aaagtcgaat aaagtgaaca 1020

ataattaatt ctttattgtc atcatgaacg gcggacatat tcagttgatg tcgacaagct 1080ataattaatt ctttattgtc atcatgaacg gcggacatat tcagttgatg tcgacaagct 1080

tcaactgtcc atgggcccgc ggccgctcga gcatctggta atttatagca tagaaaaaaa 1140tcaactgtcc atggcccgc ggccgctcga gcatctggta atttatagca tagaaaaaaa 1140

caaaatgaaa ttctactata tttttacata catatattct aaatatgaaa gtggtgattg 1200caaaatgaaa ttctactata tttttacata catatattct aaatatgaaa gtggtgattg 1200

tgactagcgt agcatcgctc atctatatac tatatagtaa taccaataga gctcaagact 1260tgactagcgt agcatcgctc atctatatac tatatagtaa taccaataga gctcaagact 1260

acgactagta aactgataca atctcttata tgtgggtaat gttctcgatg tcgatagcca 1320acgactagta aactgataca atctcttata tgtgggtaat gttctcgatg tcgatagcca 1320

tatgcccggt agttgcgata tacataaact gatcactaat tccaaaccca cccgcttttt 1380tatgcccggt agttgcgata tacataaact gatcactaat tccaaaccca cccgcttttt 1380

atagtaagtt tttcacccat aaataataaa tacaatggaa ttcgccacca tggaagacgc 1440atagtaagtt tttcacccat aaataataaa tacaatggaa ttcgccacca tggaagacgc 1440

caaaaacata aagaaaggcc cggcgccatt ctatccgctg gaagatggaa ccgctggaga 1500caaaaacata aagaaaggcc cggcgccatt ctatccgctg gaagatggaa ccgctggaga 1500

gcaactgcat aaggctatga agagatacgc cctggttcct ggaacaattg cttttacaga 1560gcaactgcat aaggctatga agagatacgc cctggttcct ggaacaattg cttttacaga 1560

tgcacatatc gaggtggaca tcacttacgc tgagtacttc gaaatgtccg ttcggttggc 1620tgcacatatc gaggtggaca tcacttacgc tgagtacttc gaaatgtccg ttcggttggc 1620

agaagctatg aaacgatatg ggctgaatac aaatcacaga atcgtcgtat gcagtgaaaa 1680agaagctatg aaacgatatg ggctgaatac aaatcacaga atcgtcgtat gcagtgaaaa 1680

ctctcttcaa ttctttatgc cggtgttggg cgcgttattt atcggagttg cagttgcgcc 1740ctctcttcaa ttctttatgc cggtgttggg cgcgttattt atcggagttg cagttgcgcc 1740

cgcgaacgac atttataatg aacgtgaatt gctcaacagt atgggcattt cgcagcctac 1800cgcgaacgac atttataatg aacgtgaatt gctcaacagt atgggcattt cgcagcctac 1800

cgtggtgttc gtttccaaaa aggggttgca aaaaattttg aacgtgcaaa aaaagctccc 1860cgtggtgttc gtttccaaaa aggggttgca aaaaattttg aacgtgcaaa aaaagctccc 1860

aatcatccaa aaaattatta tcatggattc taaaacggat taccagggat ttcagtcgat 1920aatcatccaa aaaattatta tcatggattc taaaacggat taccagggat ttcagtcgat 1920

gtacacgttc gtcacatctc atctacctcc cggttttaat gaatacgatt ttgtgccaga 1980gtacacgttc gtcacatctc atctacctcc cggttttaat gaatacgatt ttgtgccaga 1980

gtccttcgat agggacaaga caattgcact gatcatgaac tcctctggat ctactggtct 2040gtccttcgat agggacaaga caattgcact gatcatgaac tcctctggat ctactggtct 2040

gcctaaaggt gtcgctctgc ctcatagaac tgcctgcgtg agattctcgc atgccagaga 2100gcctaaaggt gtcgctctgc ctcatagaac tgcctgcgtg agattctcgc atgccagaga 2100

tcctattttt ggcaatcaaa tcattccgga tactgcgatt ttaagtgttg ttccattcca 2160tcctattttt ggcaatcaaa tcattccgga tactgcgatt ttaagtgttg ttccattcca 2160

tcacggtttt ggaatgttta ctacactcgg atatttgata tgtggatttc gagtcgtctt 2220tcacggtttt ggaatgttta ctacactcgg atatttgata tgtggatttc gagtcgtctt 2220

aatgtataga tttgaagaag agctgtttct gaggagcctt caggattaca agattcaaag 2280aatgtataga tttgaagaag agctgtttct gaggagcctt caggattaca agattcaaag 2280

tgcgctgctg gtgccaaccc tattctcctt cttcgccaaa agcactctga ttgacaaata 2340tgcgctgctg gtgccaaccc tattctcctt cttcgccaaa agcactctga ttgacaaata 2340

cgatttatct aatttacacg aaattgcttc tggtggcgct cccctctcta aggaagtcgg 2400cgattattct aatttacacg aaattgcttc tggtggcgct cccctctcta aggaagtcgg 2400

ggaagcggtt gccaagaggt tccatctgcc aggtatcagg caaggatatg ggctcactga 2460ggaagcggtt gccaagaggt tccatctgcc aggtatcagg caaggatatg ggctcactga 2460

gactacatca gctattctga ttacacccga gggggatgat aaaccgggcg cggtcggtaa 2520gactacatca gctattctga ttacacccga gggggatgat aaaccgggcg cggtcggtaa 2520

agttgttcca ttttttgaag cgaaggttgt ggatctggat accgggaaaa cgctgggcgt 2580agttgttcca ttttttgaag cgaaggttgt ggatctggat accgggaaaa cgctgggcgt 2580

taatcaaaga ggcgaactgt gtgtgagagg tcctatgatt atgtccggtt atgtaaacaa 2640taatcaaaga ggcgaactgt gtgtgagagg tcctatgatt atgtccggtt atgtaaacaa 2640

tccggaagcg accaacgcct tgattgacaa ggatggatgg ctacattctg gagacatagc 2700tccggaagcg accaacgcct tgattgacaa ggatggatgg ctacattctg gagacatagc 2700

ttactgggac gaagacgaac acttcttcat cgttgaccgc ctgaagtctc tgattaagta 2760ttactgggac gaagacgaac acttcttcat cgttgaccgc ctgaagtctc tgattaagta 2760

caaaggctat caggtggctc ccgctgaatt ggaatccatc ttgctccaac accccaacat 2820caaaggctat caggtggctc ccgctgaatt ggaatccatc ttgctccaac accccaacat 2820

cttcgacgca ggtgtcgcag gtcttcccga cgatgacgcc ggtgaacttc ccgccgccgt 2880cttcgacgca ggtgtcgcag gtcttcccga cgatgacgcc ggtgaacttc ccgccgccgt 2880

tgttgttttg gagcacggaa agacgatgac ggaaaaagag atcgtggatt acgtcgccag 2940tgttgttttg gagcacggaa agacgatgac ggaaaaagag atcgtggatt acgtcgccag 2940

tcaagtaaca accgcgaaaa agttgcgcgg aggagttgtg tttgtggacg aagtaccgaa 3000tcaagtaaca accgcgaaaa agttgcgcgg aggagttgtg tttgtggacg aagtaccgaa 3000

aggtcttacc ggaaaactcg acgcaagaaa aatcagagag atcctcataa aggccaagaa 3060aggtcttacc ggaaaactcg acgcaagaaa aatcagagag atcctcataa aggccaagaa 3060

gggcggaaag atcgccgtgc gggatccacc ggtcgccacc atggtgagca agggcgagga 3120gggcggaaag atcgccgtgc gggatccacc ggtcgccacc atggtgagca agggcgagga 3120

gctgttcacc ggggtggtgc ccatcctggt cgagctggac ggcgacgtaa acggccacaa 3180gctgttcacc gggtggtgc ccatcctggt cgagctggac ggcgacgtaa acggccacaa 3180

gttcagcgtg tccggcgagg gcgagggcga tgccacctac ggcaagctga ccctgaagtt 3240gttcagcgtg tccggcgagg gcgagggcga tgccacctac ggcaagctga ccctgaagtt 3240

catctgcacc accggcaagc tgcccgtgcc ctggcccacc ctcgtgacca ccctgaccta 3300catctgcacc accggcaagc tgcccgtgcc ctggcccacc ctcgtgacca ccctgaccta 3300

cggcgtgcag tgcttcagcc gctaccccga ccacatgaag cagcacgact tcttcaagtc 3360cggcgtgcag tgcttcagcc gctaccccga ccacatgaag cagcacgact tcttcaagtc 3360

cgccatgccc gaaggctacg tccaggagcg caccatcttc ttcaaggacg acggcaacta 3420cgccatgccc gaaggctacg tccaggagcg caccatcttc ttcaaggacg acggcaacta 3420

caagacccgc gccgaggtga agttcgaggg cgacaccctg gtgaaccgca tcgagctgaa 3480caagacccgc gccgaggtga agttcgaggg cgacaccctg gtgaaccgca tcgagctgaa 3480

gggcatcgac ttcaaggagg acggcaacat cctggggcac aagctggagt acaactacaa 3540gggcatcgac ttcaaggagg acggcaacat cctggggcac aagctggagt acaactacaa 3540

cagccacaac gtctatatca tggccgacaa gcagaagaac ggcatcaagg tgaacttcaa 3600cagccacaac gtctatatca tggccgacaa gcagaagaac ggcatcaagg tgaacttcaa 3600

gatccgccac aacatcgagg acggcagcgt gcagctcgcc gaccactacc agcagaacac 3660gatccgccac aacatcgagg acggcagcgt gcagctcgcc gaccactacc agcagaacac 3660

ccccatcggc gacggccccg tgctgctgcc cgacaaccac tacctgagca cccagtccgc 3720ccccatcggc gacggccccg tgctgctgcc cgacaaccac tacctgagca cccagtccgc 3720

cctgagcaaa gaccccaacg agaagcgcga tcacatggtc ctgctggagt tcgtgaccgc 3780cctgagcaaa gaccccaacg agaagcgcga tcacatggtc ctgctggagt tcgtgaccgc 3780

cgccgggatc actctcggca tggacgagct gtacaagtaa cccgggatcc ggcttccttt 3840cgccgggatc actctcggca tggacgagct gtacaagtaa cccgggatcc ggcttccttt 3840

tctaaacgat tgggtgagga aaccgagata gaaataatag gaggtaatga tatgtatcaa 3900tctaaacgat tgggtgagga aaccgagata gaaataatag gaggtaatga tatgtatcaa 3900

tcggtgtgta gaaagtgtta catcgactca taatattata ttttttatct aaaaaactaa 3960tcggtgtgta gaaagtgtta catcgactca taatattata ttttttatct aaaaaactaa 3960

aaataaacat tgattaaatt ttaatataat acttaaaaat ggatgttgtg tcgttagata 4020aaataaacat tgattaaatt ttaatataat acttaaaaat ggatgttgtg tcgttagata 4020

aaccgtttat gtattttgag gaaattgata atgagttaga ttacgaacca gaaagtgcaa 4080aaccgtttat gtattttgag gaaattgata atgagttaga ttacgaacca gaaagtgcaa 4080

atgaggtcgc aaaaaaactg ccgtatcaag gacagttaaa actattacta ggagaattat 4140atgaggtcgc aaaaaaactg ccgtatcaag gacagttaaa actattacta ggagaattat 4140

tttttcttag taagttacag cgacacggta tattagatgg tgccaccgta gtgtatatag 4200tttttcttag taagttacag cgacacggta tattatagatgg tgccaccgta gtgtatatag 4200

gatctgctcc cggtacacat atacgttatt tgagagatca tttctataat ttaggagtga 4260gatctgctcc cggtacacat atacgttatt tgagagatca tttctataat ttaggagtga 4260

tcatcaaatg gatgctaatt gacggccgcc atcatgatcc tattttaaat ggattgcgtg 4320tcatcaaatg gatgctaatt gacggccgcc atcatgatcc tattttaaat ggattgcgtg 4320

atgtgactct agtgactcgg ttcgttgatg aggaatatct acgatccatc aaaaaacaac 4380atgtgactct agtgactcgg ttcgttgatg aggaatatct acgatccatc aaaaaacaac 4380

tgcatccttc taagattatt ttaatttctg atgtgagatc caaacgagga ggaaatgaac 4440tgcatccttc taagattatt ttaatttctg atgtgagatc caaacgagga ggaaatgaac 4440

ctagtacggc ggatttacta agtaattacg ctctacaaaa tgtcatgatt agtattttaa 4500ctagtacggc ggatttacta agtaattacg ctctacaaaa tgtcatgatt agtattttaa 4500

accccgtggc atctagtctt aaatggagat gcccgtttcc agatcaatgg atcaaggact 4560accccgtggc atctagtctt aaatggagat gcccgtttcc agatcaatgg atcaaggact 4560

tttatatccc acacggtaat aaaatgttac aaccttttgc tccttcatat tcagctgaaa 4620tttatatccc acacggtaat aaaatgttac aaccttttgc tccttcatat tcagctgaaa 4620

tgagattatt aagtatttat accggtgaga acatgagact gactcggtac ctaaagagac 4680tgagattatt aagtatttat accggtgaga acatgagact gactcggtac ctaaagagac 4680

ggagtcactg ccaaccgaga cggtcatagc tgtttcctgt gtgccgcttc ctcgctcact 4740ggagtcactg ccaaccgaga cggtcatagc tgtttcctgt gtgccgcttc ctcgctcact 4740

gactcgctgc gctcggtcgt tcggctgcgg cgagcggtat cagctcactc aaaggcggta 4800gactcgctgc gctcggtcgt tcggctgcgg cgagcggtat cagctcactc aaaggcggta 4800

atacggttac ccacagaatc aggggataac gcaggaaaga acatgtgagc aaaaggccag 4860atacggttac ccacagaatc aggggataac gcaggaaaga acatgtgagc aaaaggccag 4860

caaaaggcca ggaaccgtaa aaaggccgcg ttgctggcgt ttttccatag gctccgcccc 4920caaaaggcca ggaaccgtaa aaaggccgcg ttgctggcgt ttttccatag gctccgcccc 4920

cctgacgagc atcacaaaaa tcgacgctca agtcagaggt ggcgaaaccc gacaggacta 4980cctgacgagc atcacaaaaa tcgacgctca agtcagaggt ggcgaaaccc gacaggacta 4980

taaagatacc aggcgtttcc ccctggaagc tccctcgtgc gctctcctgt tccgaccctg 5040taaagatacc aggcgtttcc ccctggaagc tccctcgtgc gctctcctgt tccgaccctg 5040

ccgcttaccg gatacctgtc cgcctttctc ccttcgggaa gcgtggcgct ttctcatagc 5100ccgcttaccg gatacctgtc cgcctttctc ccttcgggaa gcgtggcgct ttctcatagc 5100

tcacgctgta ggtatctcag ttcggtgtag gtcgttcgct ccaagctggg ctgtgtgcac 5160tcacgctgta ggtatctcag ttcggtgtag gtcgttcgct ccaagctggg ctgtgtgcac 5160

gaaccccccg ttcagcccga ccgctgcgcc ttatccggta actatcgtct tgagtccaac 5220gaaccccccg ttcagcccga ccgctgcgcc ttatccggta actatcgtct tgagtccaac 5220

ccggtaagac acgacttatc gccactggca gcagccactg gtaacaggat tagcagagcg 5280ccggtaagac acgacttatc gccactggca gcagccactg gtaacaggat tagcagagcg 5280

aggtatgtag gcggtgctac agagttcttg aagtggtggc ctaactacgg ctacactaga 5340aggtatgtag gcggtgctac agagttcttg aagtggtggc ctaactacgg ctacactaga 5340

aggacagtat ttggtatctg cgctctgctg aagccagtta ccttcggaaa aagagttggt 5400aggacagtat ttggtatctg cgctctgctg aagccagtta ccttcggaaa aagagttggt 5400

agctcttgat ccggcaaaca aaccaccgct ggtagcggtg gtttttttgt ttgcaagcag 5460agctcttgat ccggcaaaca aaccaccgct ggtagcggtg gtttttttgt ttgcaagcag 5460

cagattacgc gcagaaaaaa aggatctcaa gaagatcctt tgatcttttc tacggggtct 5520cagattacgc gcagaaaaaa aggatctcaa gaagatcctt tgatcttttc tacggggtct 5520

gacgctcagt ggaacgaaaa ctcacgttaa gggattttgg tcatgagatt atcaaaaagg 5580gacgctcagt ggaacgaaaa ctcacgttaa gggattttgg tcatgagatt atcaaaaagg 5580

atcttcacct agatcctttt aaattaaaaa tgaagtttta aatcaatcta aagtatatat 5640atcttcacct agatcctttt aaattaaaaa tgaagtttta aatcaatcta aagtatatat 5640

gagtaaactt ggtctgacag ttaccaatgc ttaatcagtg aggcacctat ctcagcgatc 5700gagtaaactt ggtctgacag ttaccaatgc ttaatcagtg aggcacctat ctcagcgatc 5700

tgtctatttc gttcatccat agttgcctga ctccccgtcg tgtagataac tacgatacgg 5760tgtctatttc gttcatccat agttgcctga ctccccgtcg tgtagataac tacgatacgg 5760

gagggcttac catctggccc cagtgctgca ataataccgc gggacccacg ctcaccggct 5820gagggcttac catctggccc cagtgctgca ataataccgc gggacccacg ctcaccggct 5820

ccagatttat cagcaataaa ccagccagcc ggaagggccg agcgcagaag tggtcctgca 5880ccagatttat cagcaataaa ccagccagcc ggaagggccg agcgcagaag tggtcctgca 5880

actttatccg cctccatcca gtctattaat tgttgccggg aagctagagt aagtagttcg 5940actttatccg cctccatcca gtctattaat tgttgccggg aagctagagt aagtagttcg 5940

ccagttaata gtttgcgcaa cgttgttgcc atcgctacag gcatcgtggt atcacgctcg 6000ccagttaata gtttgcgcaa cgttgttgcc atcgctacag gcatcgtggt atcacgctcg 6000

tcgtttggta tggcttcatt cagctccggt tcccaacgat caaggcgagt tacatgatcc 6060tcgtttggta tggcttcatt cagctccggt tcccaacgat caaggcgagt tacatgatcc 6060

cccatgttgc gcaaaaaagc ggttagctcc ttcggtcctc cgatcgttgt cagaagtaag 6120cccatgttgc gcaaaaaagc ggttagctcc ttcggtcctc cgatcgttgt cagaagtaag 6120

ttggccgccg tgttatcact catggttatg gcagcactac ataattctct tactgtcatg 6180ttggccgccg tgttatcact catggttatg gcagcactac ataattctct tactgtcatg 6180

ccatccgtaa gatgcttttc tgtgactggt gagtactcaa ccaagtcatt ctgagaatag 6240ccatccgtaa gatgcttttc tgtgactggt gagtactcaa ccaagtcatt ctgagaatag 6240

tgtatgcggc gaccgagttg ctcttgcccg gcgtcaatac gggataatac cgcgccacat 6300tgtatgcggc gaccgagttg ctcttgcccg gcgtcaatac gggataatac cgcgccacat 6300

agcagaactt taaaagtgct catcattgga aaacgttctt cggggcgaaa actctcaagg 6360agcagaactt taaaagtgct catcattgga aaacgttctt cggggcgaaa actctcaagg 6360

atcttaccgc tgttgagatc cagttcgatg taacccactc gtgcacccaa ctgatcttca 6420atcttaccgc tgttgagatc cagttcgatg taacccactc gtgcacccaa ctgatcttca 6420

gcatctttta ctttcaccag cgtttctggg tgagcaaaaa caggaaggca aaatgccgca 6480gcatctttta ctttcaccag cgtttctggg tgagcaaaaa caggaaggca aaatgccgca 6480

aaaaagggaa taagggcgac acggaaatgt tgaatactca tactcttcct ttttcaatat 6540aaaaagggaa taagggcgac acggaaatgt tgaatactca tactcttcct ttttcaatat 6540

tattgaagca tttatcaggg ttattgtctc atgagcggat acatatttga atgtatttag 6600tattgaagca tttatcaggg ttatgtctc atgagcggat acatatttga atgtatttag 6600

<210> 2<210> 2

<211> 2397<211> 2397

<212> DNA<212> DNA

<213> 人工序列<213> Artificial sequence

<400> 2<400> 2

gccaccatgg aagacgccaa aaacataaag aaaggcccgg cgccattcta tccgctggaa 60gccaccatgg aagacgccaa aaacataaag aaaggcccgg cgccaattcta tccgctggaa 60

gatggaaccg ctggagagca actgcataag gctatgaaga gatacgccct ggttcctgga 120gatggaaccg ctggagagca actgcataag gctatgaaga gatacgccct ggttcctgga 120

acaattgctt ttacagatgc acatatcgag gtggacatca cttacgctga gtacttcgaa 180acaattgctt ttacagatgc acatatcgag gtggacatca cttacgctga gtacttcgaa 180

atgtccgttc ggttggcaga agctatgaaa cgatatgggc tgaatacaaa tcacagaatc 240atgtccgttc ggttggcaga agctatgaaa cgatatgggc tgaatacaaa tcacagaatc 240

gtcgtatgca gtgaaaactc tcttcaattc tttatgccgg tgttgggcgc gttatttatc 300gtcgtatgca gtgaaaactc tcttcaattc tttatgccgg tgttgggcgc gttatttatc 300

ggagttgcag ttgcgcccgc gaacgacatt tataatgaac gtgaattgct caacagtatg 360ggagttgcag ttgcgcccgc gaacgacatt tataatgaac gtgaattgct caacagtatg 360

ggcatttcgc agcctaccgt ggtgttcgtt tccaaaaagg ggttgcaaaa aattttgaac 420ggcatttcgc agcctaccgt ggtgttcgtt tccaaaaagg ggttgcaaaa aattttgaac 420

gtgcaaaaaa agctcccaat catccaaaaa attattatca tggattctaa aacggattac 480gtgcaaaaaa agctcccaat catccaaaaa attattatca tggattctaa aacggattac 480

cagggatttc agtcgatgta cacgttcgtc acatctcatc tacctcccgg ttttaatgaa 540cagggatttc agtcgatgta cacgttcgtc acatctcatc tacctcccgg ttttaatgaa 540

tacgattttg tgccagagtc cttcgatagg gacaagacaa ttgcactgat catgaactcc 600tacgattttg tgccagagtc cttcgatagg gacaagacaa ttgcactgat catgaactcc 600

tctggatcta ctggtctgcc taaaggtgtc gctctgcctc atagaactgc ctgcgtgaga 660tctggatcta ctggtctgcc taaaggtgtc gctctgcctc atagaactgc ctgcgtgaga 660

ttctcgcatg ccagagatcc tatttttggc aatcaaatca ttccggatac tgcgatttta 720ttctcgcatg ccagagatcc tatttttggc aatcaaatca ttccggatac tgcgatttta 720

agtgttgttc cattccatca cggttttgga atgtttacta cactcggata tttgatatgt 780agtgttgttc cattccatca cggttttgga atgtttacta cactcggata tttgatatgt 780

ggatttcgag tcgtcttaat gtatagattt gaagaagagc tgtttctgag gagccttcag 840ggatttcgag tcgtcttaat gtatagattt gaagaagagc tgtttctgag gagccttcag 840

gattacaaga ttcaaagtgc gctgctggtg ccaaccctat tctccttctt cgccaaaagc 900gattacaaga ttcaaagtgc gctgctggtg ccaaccctat tctccttctt cgccaaaagc 900

actctgattg acaaatacga tttatctaat ttacacgaaa ttgcttctgg tggcgctccc 960actctgattg acaaatacga tttatctaat ttacacgaaa ttgcttctgg tggcgctccc 960

ctctctaagg aagtcgggga agcggttgcc aagaggttcc atctgccagg tatcaggcaa 1020ctctctaagg aagtcgggga agcggttgcc aagaggttcc atctgccagg tatcaggcaa 1020

ggatatgggc tcactgagac tacatcagct attctgatta cacccgaggg ggatgataaa 1080ggatatgggc tcactgagac tacatcagct attctgatta cacccgaggg ggatgataaa 1080

ccgggcgcgg tcggtaaagt tgttccattt tttgaagcga aggttgtgga tctggatacc 1140ccgggcgcgg tcggtaaagt tgttccattt tttgaagcga aggttgtgga tctggatacc 1140

gggaaaacgc tgggcgttaa tcaaagaggc gaactgtgtg tgagaggtcc tatgattatg 1200gggaaaacgc tgggcgttaa tcaaagaggc gaactgtgtg tgagaggtcc tatgattatg 1200

tccggttatg taaacaatcc ggaagcgacc aacgccttga ttgacaagga tggatggcta 1260tccggttatg taaacaatcc ggaagcgacc aacgccttga ttgacaagga tggatggcta 1260

cattctggag acatagctta ctgggacgaa gacgaacact tcttcatcgt tgaccgcctg 1320cattctggag acatagctta ctgggacgaa gacgaacact tcttcatcgt tgaccgcctg 1320

aagtctctga ttaagtacaa aggctatcag gtggctcccg ctgaattgga atccatcttg 1380aagtctctga ttaagtacaa aggctatcag gtggctcccg ctgaattgga atccatcttg 1380

ctccaacacc ccaacatctt cgacgcaggt gtcgcaggtc ttcccgacga tgacgccggt 1440ctccaacaccc ccaacatctt cgacgcaggt gtcgcaggtc ttcccgacga tgacgccggt 1440

gaacttcccg ccgccgttgt tgttttggag cacggaaaga cgatgacgga aaaagagatc 1500gaacttcccg ccgccgttgt tgttttggag cacggaaaga cgatgacgga aaaagagatc 1500

gtggattacg tcgccagtca agtaacaacc gcgaaaaagt tgcgcggagg agttgtgttt 1560gtggattacg tcgccagtca agtaacaacc gcgaaaaagt tgcgcggagg agttgtgttt 1560

gtggacgaag taccgaaagg tcttaccgga aaactcgacg caagaaaaat cagagagatc 1620gtggacgaag taccgaaagg tcttaccgga aaactcgacg caagaaaaat cagagagatc 1620

ctcataaagg ccaagaaggg cggaaagatc gccgtgcggg atccaccggt cgccaccatg 1680ctcataaagg ccaagaaggg cggaaagatc gccgtgcggg atccaccggt cgccaccatg 1680

gtgagcaagg gcgaggagct gttcaccggg gtggtgccca tcctggtcga gctggacggc 1740gtgagcaagg gcgaggagct gttcaccggg gtggtgccca tcctggtcga gctggacggc 1740

gacgtaaacg gccacaagtt cagcgtgtcc ggcgagggcg agggcgatgc cacctacggc 1800gacgtaaacg gccacaagtt cagcgtgtcc ggcgagggcg agggcgatgc cacctacggc 1800

aagctgaccc tgaagttcat ctgcaccacc ggcaagctgc ccgtgccctg gcccaccctc 1860aagctgaccc tgaagttcat ctgcaccacc ggcaagctgc ccgtgccctg gcccaccctc 1860

gtgaccaccc tgacctacgg cgtgcagtgc ttcagccgct accccgacca catgaagcag 1920gtgaccaccc tgacctacgg cgtgcagtgc ttcagccgct accccgacca catgaagcag 1920

cacgacttct tcaagtccgc catgcccgaa ggctacgtcc aggagcgcac catcttcttc 1980cacgacttct tcaagtccgc catgcccgaa ggctacgtcc aggagcgcac catcttcttc 1980

aaggacgacg gcaactacaa gacccgcgcc gaggtgaagt tcgagggcga caccctggtg 2040aaggacgacg gcaactacaa gacccgcgcc gaggtgaagt tcgagggcga caccctggtg 2040

aaccgcatcg agctgaaggg catcgacttc aaggaggacg gcaacatcct ggggcacaag 2100aaccgcatcg agctgaaggg catcgacttc aaggaggacg gcaacatcct ggggcacaag 2100

ctggagtaca actacaacag ccacaacgtc tatatcatgg ccgacaagca gaagaacggc 2160ctggagtaca actacaacag ccacaacgtc tatatcatgg ccgacaagca gaagaacggc 2160

atcaaggtga acttcaagat ccgccacaac atcgaggacg gcagcgtgca gctcgccgac 2220atcaaggtga acttcaagat ccgccacaac atcgaggacg gcagcgtgca gctcgccgac 2220

cactaccagc agaacacccc catcggcgac ggccccgtgc tgctgcccga caaccactac 2280cactaccagc agaacaccccc catcggcgac ggccccgtgc tgctgcccga caaccactac 2280

ctgagcaccc agtccgccct gagcaaagac cccaacgaga agcgcgatca catggtcctg 2340ctgagcaccc agtccgccct gagcaaagac cccaacgaga agcgcgatca catggtcctg 2340

ctggagttcg tgaccgccgc cgggatcact ctcggcatgg acgagctgta caagtaa 2397ctggagttcg tgaccgccgc cgggatcact ctcggcatgg acgagctgta caagtaa 2397

Claims (9)

1. a kind of tracer target practice plasmid of vaccinia virus Tiantan strain, which is characterized in that including vaccinia virus Tiantan strain TK gene Upstream homologous recombination arm VTT-TKL and downstream homologous recombination arm VTT-TKR, the upstream homologous recombination arm VTT-TKL and downstream EGFP Green Fluorescent Protein gene, the EGFP Green Fluorescent Protein gene are inserted between homologous recombination arm VTT-TKR Started by promoter P7.5 and is expressed.
2. a kind of tracer target practice plasmid of vaccinia virus Tiantan strain according to claim 1, which is characterized in that the target practice Plasmid further includes Luciferase reporter gene, and the Luciferase reporter gene also is located at upstream homologous recombination arm VTT- Between TKL and downstream homologous recombination arm VTT-TKR, the Luciferase reporter gene is started by promoter P7.5 is expressed, institute The nucleotide sequence of target practice plasmid is stated as shown in sequence table 1.
3. a kind of tracer target practice plasmid of vaccinia virus Tiantan strain according to claim 1, which is characterized in that the target practice The carrier pMV-VTTTK-Luc that sets out of plasmid.
4. a kind of preparation method of the tracer target practice plasmid of vaccinia virus Tiantan strain, which is characterized in that specifically as steps described below It carries out:
Step 1, fluorescent marker tracer genetic fragment E-Luc segment, the nucleotide sequence such as sequence table of the E-Luc segment are constructed Shown in 2;
Step 2, the E-Luc segment is connected in pMV-VTTTK-Luc plasmid with the method that digestion connects, obtains bovine vaccine disease The tracer target practice plasmid of malicious the Temple of Heaven strain.
5. a kind of preparation method of the tracer target practice plasmid of vaccinia virus Tiantan strain according to claim 4, feature exist In the step 1 is specific to be carried out by the following method:
Step 1.1, using pEGFP-Luc plasmid as template, according to Luciferase reporter gene and EGFP green fluorescent protein mark Remember the fusion sequence of gene, design primer;
Step 1.2, restriction enzyme site EcoRI is added in one end of the primer, in the other end restriction enzyme site XmaI of the primer, Composition sequence is obtained as primer;
Step 1.3, using pEGFP-Luc plasmid as template, using the composition sequence as primer, after PCR amplification, signal is obtained Tracer genetic fragment E-Luc segment E-Luc segment.
6. the preparation method of the tracer target practice plasmid of according to claim 5 kind of vaccinia virus Tiantan strain, which is characterized in that Synthetic primer in the step 1.2 are as follows:
ELuc-F:5 '-GGAATTCGCCACCATGGAAGACGCCA-3 '
ELuc-R:5 '-TCCCCCCGGGTTACTTGTACAGCTCGTCCATG-3.
7. the preparation method of the tracer target practice plasmid of according to claim 5 kind of vaccinia virus Tiantan strain, which is characterized in that In the step 1.3, PCR reaction system are as follows: DNA 1 μ l, dNTP mix (2.5mM) 1 μ l, 2 μ l of forward primer (10 μM), reversely 2 μ l, 5 × PrimeSTAR buffer of primer (10 μM), 10 μ l, PrimeSTAR HS archaeal dna polymerase, 0.5 μ l, adds DEPC water extremely 50μl。
PCR reaction condition are as follows: 98 DEG C of initial denaturation 30s;98 DEG C of denaturation 10s, 55-60 DEG C of annealing 15s, 72 DEG C of extension 1min/kb are followed Ring 30 times;72 DEG C extend 5 minutes, are finally placed in 4 DEG C of preservations;
PCR fragment recycling: PCR product is through agarose gel electrophoresis, gel extraction E-Luc segment.
8. a kind of preparation method of the tracer target practice plasmid of vaccinia virus Tiantan strain according to claim 4, feature exist In step 2 is specific to be carried out as steps described below:
Step 2.1, by pMV-VTTTK-Luc plasmid through EcoRI/XmaI double digestion, gel electrophoresis recycles large fragment as carrier;
By the E-Luc segment into EcoRI/XmaI double digestion is crossed, then purification and recovery obtains junction fragment;
Step 2.2, the carrier and junction fragment are attached, converted, obtain the tracer target practice matter of vaccinia virus Tiantan strain Grain.
9. a kind of preparation method of the tracer target practice plasmid of vaccinia virus Tiantan strain according to claim 8, feature exist In the carrier and junction fragment are attached according to molecule clone technology in the step 2.2, converted.
CN201910012569.2A 2019-01-07 2019-01-07 A tracer targeting plasmid of vaccinia virus Tiantan strain and preparation method thereof Pending CN110157721A (en)

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