CN110042061B - High yield gibberellin GA3Gibberella fujikuroi mutant strain and application thereof - Google Patents
High yield gibberellin GA3Gibberella fujikuroi mutant strain and application thereof Download PDFInfo
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Abstract
本发明公开了一株一株高产赤霉素GA3的藤仓赤霉菌突变株——水稻恶苗病菌GA‑251及其应用;所述水稻恶苗病菌GA‑251(Fusarium fujikuroi GA‑251),保藏于中国典型培养物保藏中心,地址:中国武汉武汉大学,邮编430072,保藏编号:CCTCC NO:M 2019201,保藏日期2019年3月25日。该菌株通过氯化锂和钴60辐射复合诱变原生质体获得,该菌株产赤霉素GA3提高20%。本方法具有效价高,终产物易于提取等优点,克服了原工艺发酵效价低、成本高的缺点。The invention discloses a mutant strain of Gibberella fujikura with high production of gibberellin GA 3 - rice bakanae GA-251 and its application; , deposited in the China Center for Type Culture Collection, address: Wuhan University, Wuhan, China, zip code 430072, preservation number: CCTCC NO: M 2019201, preservation date March 25, 2019. The strain was obtained by compound mutagenesis of protoplasts with lithium chloride and cobalt 60 radiation, and the gibberellin GA 3 production of this strain was increased by 20%. The method has the advantages of high titer, easy extraction of the final product, etc., and overcomes the shortcomings of low fermentation titer and high cost of the original process.
Description
(一)技术领域(1) Technical field
本发明涉及一株高产赤霉素GA3的藤仓赤霉菌突变株——水稻恶苗病菌GA-251及其应用。The present invention relates to a high-yielding gibberellin GA 3 mutant strain of Gibberella fujikura - rice bakanae pathogen GA-251 and its application.
(二)背景技术(2) Background technology
赤霉素(Gibbeerllins,GAs)是一种植物激素,广泛应用于农、林、园艺、食品酿造等诸多领域。其制备方法主要有植物提取法、化学法、微生物发酵法,然而微生物发酵法因其具有生产成本低和对环境污染小等优点,具有广阔的工业应用前景。霉素最早是由日本植物病理学家Kenkichi Sawada在研究水稻恶苗病中发现的,后来他的同事EiichiKurosawa证实了这一点,他于1926年发表了一篇论文,表明这种疾病的症状可以通过应用无菌真菌培养物来复制,他发现这些分泌物也会刺激除水稻以外的几种幼苗的生长。这一具有里程碑意义的出版物随后出现了大量有关分泌物质特性的报告,1935年,东京大学农业化学教授化学家TeijiroYabuta获得了具有高生物活性的纯化样品,称为赤霉素。赤霉素可促进种子发芽、植物生长使蔬菜水果增产;可作为植物生长调节剂,促进作物生长发育;拥有雌激素样活性,在发制品中能促进头皮血液循环。Gibberellins (GAs) are plant hormones widely used in agriculture, forestry, horticulture, food brewing and many other fields. The preparation methods mainly include plant extraction method, chemical method and microbial fermentation method. However, the microbial fermentation method has the advantages of low production cost and low environmental pollution, and has broad industrial application prospects. Mycin was first discovered by Japanese phytopathologist Kenkichi Sawada in his study of rice bakanae disease, and was later confirmed by his colleague Eiichi Kurosawa, who published a paper in 1926 showing that the symptoms of the disease could be Using sterile fungal cultures to replicate, he found that the secretions also stimulated the growth of several seedlings other than rice. This landmark publication was followed by numerous reports on the properties of the secreted substance, and in 1935, chemist Teijiro Yabuta, a professor of agricultural chemistry at the University of Tokyo, obtained a purified sample with high biological activity, called gibberellin. Gibberellin can promote seed germination, plant growth and increase the yield of vegetables and fruits; it can be used as a plant growth regulator to promote crop growth and development; it has estrogen-like activity and can promote scalp blood circulation in hair products.
赤霉素GA3是一种二萜类酸,分子式C19H22O6,分子量346.37,熔点233-235℃,易溶于醇类、丙酮、乙酸乙酯、碳酸氢钠溶液及pH为6.2 的磷酸缓冲液,难溶于水和乙醚。Gibberellin GA 3 is a diterpenoid acid, molecular formula C 19 H 22 O 6 , molecular weight 346.37, melting point 233-235°C, easily soluble in alcohol, acetone, ethyl acetate, sodium bicarbonate solution and pH 6.2 phosphate buffer, insoluble in water and ether.
GAs生物合成从GGDP开始经由异戊烯二磷酸(IPP),在经过两次环化步骤从GGDP经由焦磷酸古巴酯(CPP)后,产生了贝壳杉烯。通过贝壳杉烯醇和贝壳杉烯醛在C-19上氧化产生贝壳杉烯酸,后氧化收缩,形成GA12-醛。GA12-醛羟基化生成GA14-醛,然后在C-7位氧化形成GA14, GA14通过氧化转化为GA4,GA4经去饱作用生成GA7,然后通过羟基化转化为GA3。GAs biosynthesis starts from GGDP via isopentenyl diphosphate (IPP), and after two cyclization steps from GGDP via Cuban pyrophosphate (CPP), kaurene is produced. Kaurenoic acid is produced by oxidation of kaurenol and kaurial at C-19, which is post-oxidatively contracted to form GA 12 -aldehyde. GA 12 -aldehyde is hydroxylated to GA 14 -aldehyde, which is then oxidized at the C-7 position to form GA 14 , which is converted to GA 4 by oxidation, and GA 4 is desaturated to GA 7 , which is then converted to GA 3 by hydroxylation .
1970年来我国筛选到高产变种“4303”,不过该菌无产孢子能力,且为多核菌丝,使继续选育十分困难。目前的生产效价呈现出徘徊不前的状态,而且有的生产菌种出现退化。中国的发明专利(公开号 CN104892554A)描述了关于赤霉素GA3的制备方法,但未有报道高产赤霉素的藤仓赤霉菌及其应用,传统的菌株在产量上一直在1.8g~2g之间徘徊,有待于进一步提升。Since 1970, a high-yielding variety "4303" has been screened in my country. However, the strain has no spore-producing ability and is polykaryotic, making it very difficult to continue breeding. The current production titer shows a stagnant state, and some production strains are degraded. China's invention patent (publication number CN104892554A) describes the preparation method of gibberellin GA 3 , but has not reported the high-yielding gibberellic acid Gibberella fujikura and its application, the traditional strain has been 1.8g~2g in output Wandering between, to be further improved.
(三)发明内容(3) Contents of the invention
本发明目的是提供一种高产赤霉素GA3的藤仓赤霉菌突变株——水稻恶苗病菌GA-251及其应用,该菌株可应用于工业化生产,在相同培养成本的条件下有更高的产素能力,可为工业化生产提供利润,在发酵后期杂质少,可减少提取分离工作。The purpose of the present invention is to provide a high-yielding gibberellin GA 3 mutant of Gibberella fujikura - rice bakanae GA-251 and its application, the strain can be applied to industrial production, and has more High protein-producing capacity can provide profits for industrial production, and less impurities in the later stage of fermentation can reduce the extraction and separation work.
本发明采用的技术方案是:The technical scheme adopted in the present invention is:
一株高产赤霉素GA3的藤仓赤霉菌突变株——水稻恶苗病菌GA-251 (Fusariumfujikuroi GA-251),保藏于中国典型培养物保藏中心,地址:中国武汉武汉大学,邮编430072,保藏编号:CCTCC NO:M 2019201,保藏日期2019年3月25日。A high-yielding gibberellin GA 3 mutant of Gibberella fujikura - bakanae GA-251 (Fusarium fujikuroi GA-251), deposited in the China Center for Type Culture Collection, Address: Wuhan University, Wuhan, China, zip code 430072, Deposit number: CCTCC NO: M 2019201, deposit date March 25, 2019.
本发明菌株的获得过程如下:The obtaining process of the bacterial strain of the present invention is as follows:
1、制备原生质体,具体方法参照朱廷恒等赤霉菌原生质体外源基因高效转化方法研究(浙江工业大学学报,2013,41(5),482-485)1. Preparation of protoplasts. For the specific method, refer to Zhu Tingheng et al. Research on efficient transformation of exogenous genes from Gibberella sp. (Journal of Zhejiang University of Technology, 2013, 41(5), 482-485)
2、通过钴60-γ射线(Co60γ-射线)、氯化锂单因素诱变和复合诱变得到藤仓赤霉菌GA-251。2. Gibberella fujikura GA-251 was obtained by cobalt 60-γ-ray (Co 60 γ-ray), lithium chloride single-factor mutagenesis and compound mutagenesis.
所述水稻恶苗病菌GA-251的18s rDNA序列如SEQ ID NO.1所示。The 18s rDNA sequence of the rice bakanae pathogen GA-251 is shown in SEQ ID NO.1.
本发明还涉及所述的水稻恶苗病菌GA-251在微生物发酵制备赤霉素中的应用。The invention also relates to the application of the rice bakanae pathogen GA-251 in the preparation of gibberellins by microbial fermentation.
具体的,所述水稻恶苗病菌GA-251用于微生物发酵制备赤霉素GA3。Specifically, the rice bakanae GA-251 is used for microbial fermentation to prepare gibberellin GA 3 .
具体的,所述应用为:将所述水稻恶苗病菌GA-25接种至发酵培养基,20~30℃、200~300rpm条件下发酵培养12~48h,获得含赤霉素GA3的发酵液,发酵液经分离纯化获得赤霉素GA3。Specifically, the application is as follows: inoculating the rice bakanae GA-25 into a fermentation medium, fermenting and culturing it at 20-30° C. and 200-300 rpm for 12-48 hours, to obtain a fermentation broth containing gibberellin GA 3 , the fermentation broth was separated and purified to obtain gibberellin GA 3 .
所述发酵培养基组成如下:玉米淀粉60~90g/L,米粉70~100g/L,大豆粉3~7g/L,花生粉3~7g/L,K2SO4 0.3~0.7g/L,KH2PO4 0.3~0.7g/L,溶剂为水,pH自然,121度灭菌30min。The fermentation medium is composed as follows: corn starch 60-90 g/L, rice flour 70-100 g/L, soybean flour 3-7 g/L, peanut flour 3-7 g/L, K 2 SO 4 0.3-0.7 g/L, KH 2 PO 4 0.3~0.7g/L, solvent is water, pH is natural, sterilization at 121 degrees for 30min.
优选的,所述水稻恶苗病菌GA-25先接种至斜面培养基,活化后的菌株接种至种子培养基经种子培养获得种子液再接种至发酵培养基,所述斜面培养基组成如下:土豆150~200g/L、蔗糖10~30g/L、硫酸镁0.1~0.3 g/L、碳酸钙0.1~0.3g/L、琼脂20g/L,pH自然,115℃灭菌30min;所述种子培养基组成如下:玉米淀粉10~30g/L、蔗糖10~30g/L、花生粉10~30g/L、大豆粉10~30g/L、磷酸二氢钾0.5~1.5g/L、硫酸镁0.5~1.5g/L, pH自然,121℃灭菌30min。Preferably, the rice bakanae GA-25 is first inoculated into a slant medium, the activated strain is inoculated into a seed medium, and the seed liquid is obtained by seed culture, and then inoculated into a fermentation medium, and the slant medium is composed as follows: potato 150-200 g/L, sucrose 10-30 g/L, magnesium sulfate 0.1-0.3 g/L, calcium carbonate 0.1-0.3 g/L, agar 20 g/L, natural pH, sterilized at 115°C for 30 minutes; the seed medium The composition is as follows: corn starch 10-30g/L, sucrose 10-30g/L, peanut flour 10-30g/L, soybean flour 10-30g/L, potassium dihydrogen phosphate 0.5-1.5g/L, magnesium sulfate 0.5-1.5 g/L, natural pH, sterilized at 121°C for 30min.
本发明有益效果主要体现在:The beneficial effects of the present invention are mainly reflected in:
1、本发明提供一株高产赤霉素的藤仓赤霉菌突变株,该菌株生长过程中不产生分生孢子;1. The present invention provides a Gibberella fujikura mutant with high gibberellin production, which does not produce conidia in the growth process of the bacterial strain;
2、本发明提供一种赤霉素GA3的发酵方法,该方法采用可产生赤霉素GA3;本发明菌株接种到液体种子培养基中,待细胞长成熟后,转接到发酵培养基中,发酵水平大幅度提高,赤霉素产率达到野生菌的21倍,为国际领先。赤霉素在胞外分泌,可直接从发酵液汇总获取,有利于固液分离,提取收率升高。同时,提高了设备和原料的利用率,大大降低了生产成本,具有显著的经济效益与社会效益;2. The present invention provides a fermentation method for gibberellin GA 3 , which can produce gibberellin GA 3 ; the strain of the present invention is inoculated into a liquid seed medium, and after the cells grow and mature, it is transferred to a fermentation medium Among them, the fermentation level has been greatly improved, and the yield of gibberellin has reached 21 times that of wild bacteria, leading the world. Gibberellin is secreted extracellularly and can be directly obtained from the fermentation broth, which is beneficial to solid-liquid separation and increases the extraction yield. At the same time, it improves the utilization rate of equipment and raw materials, greatly reduces the production cost, and has significant economic and social benefits;
3、采用本发明,能在现有制药生产设备上实施,无额外投资。3. The present invention can be implemented on existing pharmaceutical production equipment without additional investment.
(四)附图说明(4) Description of drawings
图1为菌株18S rDNA序列PCR扩增argrose电泳图。Fig. 1 is the argrose electrophoresis picture of the PCR amplification of the 18S rDNA sequence of the strain.
图2为电镜观察下的菌丝体形态。Figure 2 shows the morphology of the mycelium under electron microscope observation.
图3为发酵液中GA3含量变化。Figure 3 shows the change of GA3 content in the fermentation broth.
图4为发酵液中pH变化。Figure 4 shows the pH changes in the fermentation broth.
图5为GA-251发酵干重变化。Figure 5 is the change in dry weight of GA-251 fermentation.
图6为GA3高效液相色谱(HPLC)检测标准曲线。Figure 6 is a standard curve for GA3 high performance liquid chromatography (HPLC) detection.
图7为不同发酵温度对菌株GA-251GA3产生的影响Figure 7 shows the effects of different fermentation temperatures on the production of strain GA-251GA3
(五)具体实施方式(5) Specific implementation methods
下面结合具体实施例对本发明进行进一步描述,但本发明的保护范围并不仅限于此:The present invention is further described below in conjunction with specific embodiment, but the protection scope of the present invention is not limited to this:
实施例1:野生藤仓赤霉菌原生质体制备Example 1: Preparation of wild Gibberella fujikura protoplasts
(1)斜面的制备:将野生藤仓赤霉菌菌株接种至斜面培养基中,28℃培养3~7天,待气生菌丝长满斜面可转接至种子液。(1) Preparation of the slant: Inoculate the wild Gibberella fujikura strain into the slant medium, cultivate at 28°C for 3-7 days, and transfer to the seed solution when the aerial mycelium is covered with the slant.
(2)种子液的制备:(2) Preparation of seed liquid:
挑取步骤(1)中的一小块菌接种至种子培养基中,28℃,250rpm培养48h,获得种子液。种子培养基按以下方法制得:玉米淀粉20g/L、蔗糖20g/L、花生粉20g/L、大豆粉20g/L、磷酸二氢钾1.0g/L、硫酸镁1.0 g/L,溶剂为自来水,pH自然,121℃灭菌30min。Pick a small piece of bacteria in step (1) and inoculate it into a seed medium, and cultivate at 28° C. and 250 rpm for 48 hours to obtain a seed liquid. The seed culture medium is prepared by the following method: corn starch 20g/L, sucrose 20g/L, peanut flour 20g/L, soybean flour 20g/L, potassium dihydrogen phosphate 1.0g/L, magnesium sulfate 1.0g/L, the solvent is Tap water, natural pH, sterilized at 121°C for 30min.
(3)发酵培养(3) Fermentation culture
250mL规格摇瓶装样40mL发酵培养基,发酵时按体积浓度1-4%接种种子液,28℃,250rpm发酵培养168h。发酵培养基组成:玉米淀粉80g/L,米粉80g/L,大豆粉5g/L,花生粉5g/L,K2SO4 0.5g/L,KH2PO4 0.5g/L,溶剂为自来水,pH自然,121度灭菌30min。A 250mL shake flask was filled with 40mL fermentation medium, and the seed liquid was inoculated at a concentration of 1-4% by volume during fermentation, and the fermentation was cultured at 28°C and 250rpm for 168h. Fermentation medium composition: corn starch 80g/L, rice flour 80g/L, soybean flour 5g/L, peanut flour 5g/L, K 2 SO 4 0.5g/L, KH 2 PO 4 0.5g/L, the solvent is tap water, Natural pH, sterilized at 121 degrees for 30 minutes.
(4)原生质体制备(4) Protoplast preparation
从斜面接种一小菌块至YEPD液体培养基(酵母提取物0.3%、蛋白胨 1%、葡萄糖2%,溶剂为水)中,28℃、180rpm培养48个小时。取2ml 菌液加入无菌Eppendorf管中,先后用无菌水、1M MgSO4各洗涤一次。用灭菌枪头蘸取少量菌丝至已过滤除菌的1.5mL破壁缓冲液(1M MgSO4、总酶浓度为15mg/mL,其中Dryslase:Yatalase=3:7)中,吹打均匀,置于30℃水浴摇床中反应45分钟(原生质体产生率在95%以上)。 5000rpm离心10分钟,转移上清0.75mL至另一离心管,加入等量的无菌水,混合均匀,6000rpm离心5分钟,弃上清。用1mL 1M山梨醇将上述细胞沉淀充分悬浮,原生质体制备成功。经过镜检,可稀释适当倍数涂板于MYG培养基(麦芽糖0.5%,葡萄糖1%,酵母粉0.5%,蔗糖5M,琼脂2%,溶剂为水)进行原生质体复苏。对照用无菌水悬浮并稀释、涂板。通过血球计数板计数,测出单位体积内所含有的原生质体数。并将原生质体溶液稀释至106~107个/mL。A small colony was inoculated from the slant to YEPD liquid medium (0.3% yeast extract, 1% peptone, 2% glucose, and the solvent was water), and cultured at 28° C. and 180 rpm for 48 hours. Take 2ml of bacterial solution and add it to a sterile Eppendorf tube, and wash it once with sterile water and 1M MgSO4 successively. Dip a small amount of mycelium with a sterilized pipette tip into 1.5 mL of filter-sterilized wall-breaking buffer (1M MgSO4, total enzyme concentration of 15 mg/mL, where Dryslase: Yatalase=3:7), pipette evenly, and place it in The reaction was carried out in a water bath shaker at 30°C for 45 minutes (the yield of protoplasts was over 95%). Centrifuge at 5000rpm for 10 minutes, transfer 0.75 mL of the supernatant to another centrifuge tube, add an equal amount of sterile water, mix well, centrifuge at 6000rpm for 5 minutes, and discard the supernatant. The above cell pellets were fully suspended with 1 mL of 1 M sorbitol, and protoplasts were successfully prepared. After microscopic examination, it can be diluted with appropriate multiples and plated on MYG medium (maltose 0.5%,
实施例2:高产GA3突变株的筛选Example 2: Screening of high-yielding GA 3 mutants
(1)将野生型藤仓赤霉菌接种至斜面培养基,28℃培养3~7天,从斜面接种一小菌块至YEPD液体培养基(酵母提取物0.3%、蛋白胨1%、葡萄糖2%,溶剂为水),用无菌水和盐缓冲液洗涤一次,取少量菌丝加入破壁缓冲液,置于30℃水浴摇床中反应45分钟,3000rpm离心10min,弃上清用无菌水洗一次后加入缓冲液悬浮。(1) Inoculate the wild-type Gibberella fujikura into the slant medium, cultivate at 28°C for 3 to 7 days, and inoculate a small colony from the slant to YEPD liquid medium (0.3% yeast extract, 1% peptone, 2% glucose) , the solvent is water), wash once with sterile water and salt buffer, add a small amount of mycelium to the wall-breaking buffer, place it in a water bath shaker at 30 °C for 45 minutes, centrifuge at 3000 rpm for 10 minutes, discard the supernatant and wash with sterile water Add buffer suspension after one time.
(2)Co60诱变方法:将步骤(1)活化的菌株涂布于MYG固体培养基(麦芽糖0.5%、酵母粉0.5%、葡萄糖1%、蔗糖5M、琼脂2%),28℃培养3-7天至长出菌落,通过步骤(1)制备原生质体,控制菌数约为107个/mL,以不同的剂量(0Gy、200Gy、400Gy、600Gy、800Gy和1000Gy)的Co60对原生质体进行诱变。将经Co60诱变的原生质体用生理盐水稀释至10-5后涂板于MYG平板培养基,30℃培养5天,初步筛选菌落大菌,气生丝密集的菌株,挑取单菌落,进行发酵,收集发酵液通过HPLC方法检测产量,直至获得高产GA3突变株。突变次数、突变率和致死率如表1所示。(2) Co 60 mutagenesis method: The strain activated in step (1) was spread on MYG solid medium (maltose 0.5%, yeast powder 0.5%,
表1:Co60诱变方法诱变过程Table 1: Co 60 Mutagenesis Method Mutagenesis Process
(3)LiCl-Co60诱变方法:将步骤(1)制备好的原生质体悬液5mL 置于无菌ep管中,经过步骤(2)后,使用LiCl处理,处理方式:每1mL 菌体悬液使用含1mg/mL氯化锂(LiCl)用1M山梨醇缓冲液搅拌0.5h, 6000rpm离心5min,收集菌体使用无菌水清洗3次,重悬后涂布在MYG 固体培养基中,28℃培养,初步筛选菌落大菌,气生丝密集的菌株,挑取单菌落,进行发酵,收集发酵液通过HPLC方法检测产量,直至获得高产GA3突变株。突变次数、突变率和致死率如表2所示。(3) LiCl-Co 60 mutagenesis method: put 5 mL of the protoplast suspension prepared in step (1) into a sterile ep tube, and after step (2), use LiCl for treatment, treatment method: per 1 mL of bacterial cells The suspension was stirred with 1 M sorbitol buffer solution containing 1 mg/mL lithium chloride (LiCl) for 0.5 h, centrifuged at 6000 rpm for 5 min, the cells were collected and washed with sterile water for 3 times, and then resuspended and coated in MYG solid medium. Cultivated at 28°C, initially screened the colony of large bacteria and strains with dense aerial silk, picked a single colony, fermented, and collected the fermentation broth to detect the yield by HPLC until a high-yielding GA 3 mutant was obtained. The number of mutations, mutation rate and lethality are shown in Table 2.
表2:紫外-亚硝基胍复合诱变过程Table 2: UV-nitrosoguanidine composite mutagenesis process
对于每轮诱变获得的高产菌株,重新作为初始菌株按照上述方法进行复合诱变。最终筛选获得GA3产量达2~4g/L的突变株GA-251,命名为藤仓赤霉菌(Fusariumfujikuroi)GA-251,保藏于中国典型培养物保藏中心,保藏日期2019年3月25号,保藏编号CCTCCNO:M 2019201,保藏地址为中国武汉,武汉大学,邮编430072。The high-yielding strains obtained in each round of mutagenesis were re-used as initial strains and subjected to compound mutagenesis according to the above method. The mutant strain GA-251 with a GA 3 yield of 2-4 g/L was finally screened and named as Fusarium fujikuroi GA-251, which was deposited in the China Type Culture Collection on March 25, 2019. The deposit number is CCTCCNO: M 2019201, and the deposit address is Wuhan University, Wuhan, China, zip code 430072.
本发明包含但不仅限于上述三种诱变方式。The present invention includes but is not limited to the above three mutagenesis methods.
其中MYG固体培养基的配制:麦芽糖0.5%、酵母粉0.5%、葡萄糖 1%、蔗糖5M、琼脂2%,溶剂为自来水,pH自然,121度灭菌20min。The preparation of MYG solid medium: maltose 0.5%, yeast powder 0.5%,
YEPD培养基的配制:酵母提取物0.3%、蛋白胨1%、葡萄糖2%,溶剂为自来水,pH自然,121度灭菌20min。Preparation of YEPD medium: 0.3% yeast extract, 1% peptone, 2% glucose, tap water as the solvent, natural pH, sterilization at 121 degrees for 20 minutes.
实施例3:18S rDNA分子鉴定Example 3: 18S rDNA molecular identification
(1)DNA提取:取菌丝离心,取少量放入1.5mL EP管中,加入978μL sodiumphosphate buffer,悬浮菌体;将菌悬液转移至Lysing Matrix E Tube中,加入112μL MTBuffer混匀;使用MP均质破碎仪破碎细胞,速度设定为6.0,时间设定为40s;12000rpm离心Lysing Matrix E Tube 10min,去除样品碎屑;将上清液转移至新的EP管中,加入250μL PPS试剂,手持离心管晃动10次以混匀,12000rpm离心5min;将上清转移至10mL干净离心管中,加入1mL Binding Matrix suspension,将离心管上下颠倒2min,静置3min,使DNA附着于 Binding Matrix上,并等待二氧化硅基质沉淀;小心移除500μL上清 (避免吸出沉淀),将剩余的上清液与沉淀物重新混匀,吸取约600μL 混合液移入SPIN Filter中,12000rpm离心1min,弃滤液,再将剩余液体都转移至SPIN Filter,离心弃滤液;加500μLSEWS-M溶液,12000 rpm离心1min弃滤液,再将SPIN Filter离心2min,将SPIN Filter转移至新的catch tube,敞开室温干燥5min;加入50μL DES溶液,室温静置1min,并12000rpm离心1min,catch tube中的滤液即为所提取的菌种的基因组。(1) DNA extraction: centrifuge the mycelium, put a small amount into a 1.5mL EP tube, add 978μL sodiumphosphate buffer, and suspend the bacteria; transfer the bacterial suspension to a Lysing Matrix E Tube, add 112μL MTBuffer and mix; use MP The cells were broken by a homogenizer, the speed was set to 6.0, and the time was set to 40 s; the Lysing Matrix E Tube was centrifuged at 12,000 rpm for 10 min to remove sample debris; the supernatant was transferred to a new EP tube, 250 μL of PPS reagent was added, and the hand held The centrifuge tube was shaken 10 times to mix, and centrifuged at 12,000 rpm for 5 minutes; the supernatant was transferred to a 10 mL clean centrifuge tube, 1 mL of Binding Matrix suspension was added, the centrifuge tube was inverted for 2 minutes, and allowed to stand for 3 minutes to allow the DNA to adhere to the Binding Matrix. Wait for the silica matrix to settle; carefully remove 500 μL of the supernatant (avoid aspiration of the precipitate), re-mix the remaining supernatant with the precipitate, pipette about 600 μL of the mixture into the SPIN Filter, centrifuge at 12,000 rpm for 1 min, discard the filtrate, and then Transfer the remaining liquid to the SPIN Filter, and centrifuge to discard the filtrate; add 500 μL SEWS-M solution, centrifuge at 12,000 rpm for 1 min to discard the filtrate, then centrifuge the SPIN Filter for 2 min, transfer the SPIN Filter to a new catch tube, and dry it at room temperature for 5 min; add 50 μL The DES solution was allowed to stand at room temperature for 1 min, and centrifuged at 12,000 rpm for 1 min. The filtrate in the catch tube was the genome of the extracted strain.
(2)真菌18S rDNA的PCR扩增和序列分析:真菌核糖体ITS rDNA通用引物(2) PCR amplification and sequence analysis of fungal 18S rDNA: universal primers for fungal ribosomal ITS rDNA
所用引物如下:The primers used are as follows:
其中克隆PCR体系:加入10×Taq Buffer(Mg+)5μL,加入10mM dNTPs1μL,Taq DNAPolymerase0.5μL,ITS1和ITS4引物各0.5μL,模板1.5μL,补足去离子水至50μL。Clone PCR system: add 5 μL of 10×Taq Buffer (Mg+), add 1 μL of 10 mM dNTPs, 0.5 μL of Taq DNA Polymerase, 0.5 μL of ITS1 and ITS4 primers, 1.5 μL of template, and make up to 50 μL of deionized water.
其中克隆PCR程序:95℃变性45s,55-60℃退火30s,72℃延伸45 min,共35个循环。最后72℃延伸30s。The cloning PCR program was as follows: denaturation at 95°C for 45s, annealing at 55-60°C for 30s, and extension at 72°C for 45 min, a total of 35 cycles. A final extension at 72°C for 30s.
(3)取5μL PCR扩增产物,进行琼脂糖凝胶电泳实验,用凝胶成像仪观察分析。若条带清晰且大小无误(500bp左右),则对PCR产物进行凝胶回收。回收产物再各取5μL进行琼脂糖凝胶电泳验证,若条带清晰且大小无误,则回收样品可用于测序。测序由杭州擎科梓熙生物技术有限公司完成,测序引物与PCR引物相同。使用NCBI blast(http://blast.ncbi.nlm.nih.gov/)数据库进行序列比对。(3) Take 5 μL of PCR amplification products, conduct agarose gel electrophoresis experiment, and observe and analyze with a gel imager. If the band is clear and the size is correct (about 500bp), the PCR product is recovered by gel. Take 5 μL of each recovered product for verification by agarose gel electrophoresis. If the band is clear and the size is correct, the recovered sample can be used for sequencing. Sequencing was completed by Hangzhou Qingke Zixi Biotechnology Co., Ltd., and the sequencing primers were the same as PCR primers. Sequence alignments were performed using the NCBI blast (http://blast.ncbi.nlm.nih.gov/) database.
测序由杭州擎科梓熙生物技术有限公司完成,结果如下(SEQ ID NO.1):The sequencing was completed by Hangzhou Qingke Zixi Biotechnology Co., Ltd. The results are as follows (SEQ ID NO.1):
ggtccggccgggcctttccctctgtggaaccccatgcccttcactgggtgtggcggggaa 60
acaggacttttactgtgaaaaaattagagtgctccaggcaggcctatgctcgaatacatt 120
agcatggaataatagaataggacgtgtggttctattttgttggtttctaggaccgccgta 180
atgattaatagggacagtcgggggcatcagtattcaattgtcagaggtgaaattcttgga 240atgattaatagggacagtcgggggcatcagtattcaattgtcagaggtgaaattcttgga 240
tttattgaagactaactactgcgaaagcatttgccaaggatgttttcattaatcaggaac 300tttattgaagactaactactgcgaaagcatttgccaaggatgttttcattaatcaggaac 300
gaaagttaggggatcgaagacgatcagataccgtcgtagtcttaaccataaactatgccg 360gaaagttaggggatcgaagacgatcagataccgtcgtagtcttaaccataaactatgccg 360
actagggatcggacggtgttattttttgacccgttcggcaccttacgagaaatcaaagtg 420actagggatcggacggtgttattttttgacccgttcggcaccttacgagaaatcaaagtg 420
cttgggctccagggggagtatggtcgcaaggctgaaacttaaagaaattgacggaagggc 480cttgggctccagggggagtatggtcgcaaggctgaaacttaaagaaattgacggaagggc 480
accaccaggggtggagcctgcggcttaatt510accaccaggggtggagcctgcggcttaatt510
获得的序列与genBank中保存的数据进行相似性分析发现,本实验所鉴定微生物与Fusariumfujikuroi同源性最高(homology,99%/510bp,based on 18S rDNA),根据微生物分子遗传学鉴定原则,基于18S rDNA序列的同源性高于99%,鉴定菌基本属于对照菌。Similarity analysis between the obtained sequence and the data stored in genBank found that the microorganism identified in this experiment has the highest homology with Fusarium fujikuroi (homology, 99%/510bp, based on 18S rDNA), according to the principle of molecular genetic identification of microorganisms, based on 18S The homology of the rDNA sequence was higher than 99%, and the identified bacteria basically belonged to the control bacteria.
实施例4:生理生化鉴定Example 4: Physiological and biochemical identification
利用Biolog自动微生物鉴定系统考察菌株对95种碳源的代谢情况:将菌株接种于PDA平板培养基,28℃恒温培养5d,用无菌棉签将平板上的菌体洗下,与接种液(FF-IF)混合,制成菌悬液,用浊度计调整至 75%T/FF(参考值:75%±3%)。用8孔电动加液器将菌悬液分别加在Biolog FF微孔鉴定板的各孔中,每孔100μl。将微孔鉴定板放在28℃培养箱中,分别在培养24h、48h、72h、96h、168h和240h后将其置于Biolog读数仪上读取结果。综合考虑Biolog读数仪读取的各时间点数据,给出24h 鉴定结果。The biolog automatic microbial identification system was used to investigate the metabolism of the strains to 95 carbon sources: the strains were inoculated into the PDA plate medium, cultured at a constant temperature of 28 °C for 5 d, the bacteria on the plate were washed with a sterile cotton swab, and the inoculum (FF -IF) mixed to prepare a bacterial suspension, which was adjusted to 75% T/FF with a turbidimeter (reference value: 75% ± 3%). The bacterial suspension was added to each well of the Biolog FF microwell identification plate with an 8-well electric pipette, 100 μl per well. The microwell identification plate was placed in a 28°C incubator, and the results were read on a Biolog reader after culturing for 24h, 48h, 72h, 96h, 168h and 240h, respectively. Considering the data of each time point read by the Biolog reader, the 24h identification result is given.
将野生菌种按照上述方法进行生理生化鉴定,利用Biolog自动微生物鉴定系统考察菌株对95种碳源的代谢情况,综合考虑Biolog读数仪读取的各时间点数据,给出24h鉴定结果,见表3。Physiological and biochemical identification of wild strains was carried out according to the above method, and the metabolism of the strains to 95 carbon sources was investigated by using the Biolog automatic microbial identification system. The 24-hour identification results were given comprehensively considering the data at each time point read by the Biolog reader, as shown in the table. 3.
表3:菌株GA-251对Biolog FF板上95种碳源的利用能力Table 3: The ability of strain GA-251 to utilize 95 carbon sources on Biolog FF plates
Notes:+,positive;-,negative;B,borderlineNotes:+,positive;-,negative;B,borderline
实施例5:高产GA3菌株电镜观察Example 5: Electron microscope observation of high-yielding GA3 strain
(1)菌种培养:用接种环挑取斜面保藏菌种液,PDA平板划线,28℃培养5d,挑取长好的菌种块接入种子培养基,250rpm,28℃培养2d,待处理。(1) Bacterial culture: use the inoculation loop to pick the slanted surface preservation strain solution, streak the PDA plate, cultivate at 28°C for 5 days, pick the grown strain block and insert it into the seed medium, cultivate at 250rpm, 28°C for 2d, wait for deal with.
(2)菌体处理:(a)取1mL菌丝种子液分装在2.5%戊二醛中,4℃冰箱过夜放置。(b)第二天将过夜的菌体4000-5000rpm离心2min。(c)加磷酸缓冲液每隔15min后吸出缓冲液,尽量不要吸出菌体,缓冲液量随意,重复三次。(d)加锇酸,静置1.5h。(e)重复步骤b。(f)加30%、50%、 70%、80%、90%、95%的乙醇,每隔15min吸出乙醇。(g)加入无水乙醇,保存,SEM观察。(2) Bacteria treatment: (a) 1 mL of mycelial seed solution was dispensed into 2.5% glutaraldehyde, and placed in a refrigerator at 4°C overnight. (b) Centrifuge the overnight cells at 4000-5000 rpm for 2 min on the second day. (c) Add phosphate buffer solution and aspirate the buffer solution every 15 minutes, try not to aspirate the bacterial cells, and the amount of buffer solution is arbitrary, and repeat three times. (d) Add osmic acid and let stand for 1.5h. (e) Repeat step b. (f) Add 30%, 50%, 70%, 80%, 90%, 95% ethanol, and suck out the ethanol every 15 minutes. (g) Add absolute ethanol, save, and observe by SEM.
将土豆平板(PDA)上28℃培养5d的GA-251菌株按所述方法处理,进行SEM扫描电镜分析,结果如图2。采用型号为SU-8010SEM扫描电镜,图中的放大倍数为1000倍,在扫描电镜下观察菌株的形态特征为菌丝光滑,密集,纵横交错。The GA-251 strain cultured at 28° C. for 5 days on a potato plate (PDA) was treated according to the method described above, and SEM scanning electron microscope analysis was performed, and the results are shown in Figure 2 . The model is SU-8010SEM scanning electron microscope, and the magnification in the figure is 1000 times. The morphological characteristics of the strain observed under the scanning electron microscope are smooth, dense and criss-crossed hyphae.
实施例6:突变菌GA-251发酵产GA3Example 6: Fermentation of mutant strain GA-251 to produce GA3
(1)斜面的制备:将实施例1制备的高产赤霉素的藤仓赤霉菌突变株接种至斜面培养基中,28℃培养3-7天,待气生菌丝长满斜面可转接至种子液。(1) Preparation of slant: The mutant strain of Gibberella fujikura with high gibberellin production prepared in Example 1 was inoculated into the slant medium, cultivated at 28° C. for 3-7 days, and transferred when the aerial mycelium covered the slant. to the seed solution.
(2)种子液的制备:(2) Preparation of seed liquid:
挑取步骤(1)中的一小块菌接种至种子培养基中,28℃,250rpm培养48h,获得种子液。Pick a small piece of bacteria in step (1) and inoculate it into a seed medium, and cultivate at 28° C. and 250 rpm for 48 hours to obtain a seed liquid.
种子培养基按以下方法制得:玉米淀粉20g/L、蔗糖20g/L、花生粉 20g/L、大豆粉20g/L、磷酸二氢钾1.0g/L、硫酸镁1.0g/L,溶剂为水, pH自然,121℃灭菌30min。The seed culture medium is prepared by the following method: corn starch 20g/L, sucrose 20g/L, peanut flour 20g/L, soybean flour 20g/L, potassium dihydrogen phosphate 1.0g/L, magnesium sulfate 1.0g/L, the solvent is Water, natural pH, sterilized at 121°C for 30min.
(3)发酵培养(3) Fermentation culture
250mL规格摇瓶装样40mL发酵培养基,发酵时按体积浓度1-4%接种种子液,28℃,250rpm发酵培养168h。发酵过程中,其发酵液中GA3含量变化如图3,发酵液中pH变化如图4;突变菌干重变化如图5。A 250mL shake flask was filled with 40mL fermentation medium, and the seed liquid was inoculated at a concentration of 1-4% by volume during fermentation, and the fermentation was cultured at 28°C and 250rpm for 168h. During the fermentation process, the changes of GA 3 content in the fermentation broth are shown in Figure 3, the pH changes in the fermentation broth are shown in Figure 4; the dry weight changes of mutant bacteria are shown in Figure 5.
发酵培养基组成:玉米淀粉80g/L,米粉80g/L,大豆粉6g/L,花生粉5g/L,K2SO40.5g/L,KH2PO4 0.5g/L,,溶剂为自来水,pH自然,121 度灭菌30min。Fermentation medium composition: corn starch 80g/L, rice flour 80g/L, soybean flour 6g/L, peanut flour 5g/L, K 2 SO 4 0.5g/L, KH 2 PO 4 0.5g/L, the solvent is tap water , natural pH, sterilized at 121 degrees for 30 minutes.
上述突变菌通过摇瓶发酵生产,按照实施例7方法检测,所得发酵液中GA3含量为2100mg/L。The above-mentioned mutant bacteria were produced by shaking flask fermentation and detected according to the method of Example 7, and the GA 3 content in the obtained fermentation broth was 2100 mg/L.
实施例7:GA3的HPLC检测方法Example 7: HPLC detection method of GA 3
取实施例6方法制备的发酵液,按发酵液离心,12000rpm离心5min,取上清用0.45μm有机滤膜过膜后通过高效液相色谱(HPLC)检测。Take the fermentation broth prepared by the method in Example 6, centrifuge the fermentation broth at 12,000 rpm for 5 min, take the supernatant and filter it with a 0.45 μm organic filter and then detect by high performance liquid chromatography (HPLC).
检测方法:色谱柱为C18柱(150×4.6mm),柱温32℃,流速0.6 mL/min,进样量20μL,色谱保留时间30min,检测波长为210nm。GA3的出峰时间为14min。Detection method: The chromatographic column is a C18 column (150 × 4.6 mm), the column temperature is 32 °C, the flow rate is 0.6 mL/min, the injection volume is 20 μL, the chromatographic retention time is 30 min, and the detection wavelength is 210 nm. The peak time of GA 3 was 14 minutes.
其中流动相配制方法:0.5mL磷酸用水稀释到1L,取该溶液600mL 与400mL甲醇混合;The mobile phase preparation method: 0.5mL of phosphoric acid is diluted to 1L with water, and 600mL of this solution is mixed with 400mL of methanol;
GA3产量计算方法:从BBI Life Sciences公司购买GA3的标准品,用甲醇配制不同浓度(0mg/L、200mg/L、400mg/L、800mg/L、1000mg/L) 的GA3标准溶液,分别将上述标准液用HPLC检测出峰面积,根据峰面积和GA3标准溶液的浓度计算出标准曲线为Y=28123X-50.41, R2=0.999(其中Y为GA3的浓度,X为峰面积)。将未知浓度的GA3样品通过HPLC检测可以得到一个峰面积,带入上述标准曲线公式得出浓度,标准曲线结果如图6所示。GA 3 yield calculation method: buy GA 3 standard from BBI Life Sciences, prepare GA 3 standard solutions of different concentrations (0mg/L, 200mg/L, 400mg/L, 800mg/L, 1000mg/L) with methanol, Detect the peak area of the above standard solution by HPLC respectively, and calculate the standard curve according to the peak area and the concentration of the GA 3 standard solution as Y=28123X-50.41, R = 0.999 (wherein Y is the concentration of GA 3 , and X is the peak area) . The GA 3 sample of unknown concentration can be detected by HPLC to obtain a peak area, which is brought into the above standard curve formula to obtain the concentration. The result of the standard curve is shown in Figure 6.
实施例8:摇瓶发酵体系发酵温度优化Example 8: Optimization of fermentation temperature of shake flask fermentation system
将实施例5中发酵温度分别改为25℃、28℃、30℃、32℃、37℃,其它操作同实施例6,按照实施例7检测方法检测发酵液GA3,结果如图 7所示。The fermentation temperature in Example 5 was changed to 25°C, 28°C, 30°C, 32°C, and 37°C, respectively. Other operations were the same as those in Example 6. The fermentation broth GA 3 was detected according to the detection method of Example 7. The results are shown in Figure 7 .
发酵温度在28℃最佳,于168小时达到最高产量约2.1g/L。当温度超过30℃时,GA3产量低于最佳温度的产量。The best fermentation temperature was 28℃, and the highest yield was about 2.1g/L in 168 hours. When the temperature exceeds 30°C, the GA 3 yield is lower than that of the optimum temperature.
序列表 sequence listing
<110> 浙江工业大学<110> Zhejiang University of Technology
<120> 高产赤霉素GA<sub>3<sub>的藤仓赤霉菌突变株及其应用<120> Gibberella fujikura mutant strain with high gibberellin GA<sub>3<sub> and its application
<160> 1<160> 1
<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0
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<211> 510<211> 510
<212> DNA<212> DNA
<213> Fusarium fujikuroi<213> Fusarium fujikuroi
<400> 1<400> 1
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