Specific embodiment
One, experimental material
Tissue specimen: gastric cancer and cancer beside organism's qRT-PCR sample are obtained from 12 patients with gastric cancer by operation, when materials
Between be 2 months 2015;For paraffin embedding sample by performing the operation what excision was obtained from 90 patients with gastric cancer, the materials time is 2015
Year.All patients being included according to 2010 standard of UICC/AJCC carry out clinicopathologic stage: 19 be the gastric cancer I phase, 37
For II phase of gastric cancer, 34 are the gastric cancer III phase.Sample is fixed with 10% formalin, paraffin embedding, slice.All patients pass through
Radical surgery tumor resection lesion, and do not received any antineoplaston before materials.
Key instrument: SpectraMax5 multi-function microplate reader is purchased from U.S. Molecular Devices company, Odyssey
Imaging system is purchased from LI-COR company, and LightCycler 480 is purchased from Roche, and inverted microscope is just being set microscope and is purchased from
Olympus, FACSCanto II streaming systems are purchased from BD Biosciences.
Main agents and consumptive material: fetal calf serum, 1640 culture mediums are purchased from Hyclone company, and 2000 × PBS powder is purchased from
Biosharp company.It EDTA, is that Solarbio company produces without EDTA pancreatin, Tris-Hcl (PH8.8 and PH6.8) is purchased from Shanghai
Bai Sai Bioisystech Co., Ltd, TEMED, 30% polyacrylamide, ammonium persulfate, 10%SDS etc. prepare the reagent purchase of gel
From Biosharp company.Tris alkali is purchased from Biosharp company.Glycine, SDS powder are the production of Sigma company.Methanol, isopropyl
Alcohol, dehydrated alcohol, chloroform, tween are the production of Guangdong Province's chemical reagent engineering and technological research development centre.Skimmed milk power is adopted
Purchased from Biosharp company.2000 × TBS powder, primary antibody dilution are purchased from Biosharp company.Holoprotein extracts kit is
The production of Co., Ltd, Nanjing Keygen Biotech.5 × albumen sample-loading buffer is purchased from Hangzhou Fu De Biotechnology Co., Ltd.Rabbit Dan Ke
Grand E-cadherin, vimentin and GAPDH are purchased from Cell Signal Technology, and the anti-DLC3 antibody of rabbit polyclonal is purchased from
Proteintech company, the anti-MACC1 antibody of rabbit monoclonal are purchased from Abnova company, and the anti-Ki-67 antibody of rabbit monoclonal is purchased from Cell
Signaling technology company, goat-anti rabbit secondary antibody are the production of Li-COR company.Dimethylbenzene, sodium citrate buffer, mistake
Hydrogen peroxide solution, DAB working solution, haematoxylin, hydrochloric acid, neutral gum are purchased from the exploitation of Guangdong Province's chemical reagent engineering and technological research
The heart.Each model Tissue Culture Dish, 6 orifice plates, 12 orifice plates, 96 orifice plates are Corning Incorporated's production.The cell Transwell is purchased from healthy and free from worry public affairs
Department.BCA determination of protein concentration kit is the green skies biotech firm production in Jiangsu.Trizol Kit is purchased from Takara, and cDNA is closed
Takara is purchased from Reverse Transcriptase kit.SYBR Green I Master kit is purchased from Takara.Apoptosis detection kit is
Three arrow biological productions.ROS detection kit is the green skies biotech firm production in Jiangsu.EDU kit is sharp rich production.MTT purchase
From Sigma company.Dimethyl sulfoxide is purchased from Guangzhou Hua Da company.Recombinant slow virus is purchased from Ji Kai company.
Two, experimental method
1. immunohistochemical staining
Roasting piece: slice is baked piece 3 hours on 65 DEG C of roasting piece machines
Dewaxing: twice through xylene soak, every time after ten minutes, successively through 100% alcohol, 95% alcohol, 90% alcohol,
80% alcohol, 70% alcohol, which impregnate 3 minutes, to dewax, and is finally immersed in PBS solution and washs 3 times, every time 5 minutes.
Antigen retrieval: configuration citrate solution 2000ml is placed in pressure cooker, and slice is placed in slide holding frame and is put into
In citrate solution, electromagnetic oven heating to pressure cooker jet starts timing, stops heating and being placed in pressure cooker cold after 3 minutes
Recovery room temperature is cooled in water.Slice is taken out to wash 3 times, every time 3 minutes through PBS solution.
Endogenous peroxydase inactivation: slice impregnates 10 minutes in 3% hydrogenperoxide steam generator, continues to use PBS solution
Washing 3 times, every time 3 minutes.
Closing: 5%BSA is added dropwise and is incubated at room temperature tissue 1 hour
It incubates primary antibody: primary antibody is added dropwise in tissue, is placed in wet box in 4 DEG C of refrigerators and is incubated overnight.
Rewarming: after wet box is transferred to normal temperature environment 1 hour by next day, with PBS solution washing slice 5 times, 3 minutes every time
It incubates secondary antibody: corresponding kind source property secondary antibody is added dropwise in tissue, is incubated at room temperature 1 hour, continues to be washed with PBS solution and cut
Piece 5 times, every time 5 minutes.
DAB colour developing: press DAB concentrate: DBA substrate buffer solution=1:20 configures DAB solution, and drop is in tissue, and develop the color 3-
Color development stopping in clear water is immersed after ten minutes.
Haematoxylin dyeing: the slice after colour developing is placed in haematoxylin solution after dyeing 10~15 minutes, under tap water
Flowing water rinses about 10min.
Differentiation is anti-blue: it is to impregnate 2 seconds in l% hydrochloride alcohol that slice, which is placed in concentration, again, is transferred to tap water down-flow water rapidly
It rinses about 5 minutes, in microscopically observation nuclear targeting situation, if unobvious repeatable haematoxylin dyeing and subsequent rinse,
The step of differentiation.
It is transparent: histotomy of the dye after good being sequentially placed into 70%, 80%, 90%, 95% alcoholic solution and impregnates 2 points
Clock, 100% alcohol impregnate about 10 minutes, are finally soaked in 10min in dimethylbenzene.
Mounting is taken pictures: the histotomy after transparent draws neutral tree fat drips with suction pipe after the natural air drying of ventilation and exists
Wax disk(-sc) is placed in and just sets microscopically observation, takes pictures by tissue, covered, hardening of resin after placing 1-2 days at room temperature.
Evaluation criterion: dye level is divided into 0 point (colourless), 1 point (faint yellow), 2 points (yellow), 3 points (brown color), often
Kind dyeing occupied area is then according to 0 point (0%), 1 point (1%-25%), 2 points (26%-50%), 3 points (51%-75%) or 4 points
(76%-100%) scores.Dye level scoring is added after being multiplied with the scoring of corresponding stained area, has both been obtained last
Dyeing scoring.Wherein it is defined as negative expression for 0-2 points, 3-5 points are defined as weakly positive expression, and 6-12 points are defined as strong positive table
It reaches.
2.MTT experiment
Kind plate: need to be arranged blank group, negative control group, experimental group, 5 multiple holes of every group of setting by experiment.Cell is disappeared
Change, precipitated after centrifugation, complete medium is added, cell is resuspended and counts, by the plantation of 2000/hole density in 96 orifice plates,
Liquid volume is no more than 200ul in every hole, cultivates in 37 DEG C of incubators.
Processing: it handles after overnight incubation by experimental group to continue to be put in 37 DEG C of incubators after cell respectively and cultivate.
0.5% MTT stoste is made into MTT working solution by 1:9 with the RPMI-1640 culture medium without fetal calf serum.By 96
MTT working solution 200ul is added after cell conditioned medium sucks in orifice plate, is protected from light in 37 DEG C of incubators and is incubated for 3h, suck supernatant, every hole adds
Enter 150ul dimethyl sulfoxide and measures each hole at 490nm wavelength using microplate reader after room temperature shakes 10min to precipitating dissolution
OD value.
3. plate clone is tested
Kind plate: will be precipitated after cell dissociation, centrifugation, complete medium is added, cell is resuspended, train completely by every hole 2ml
Feeding base, 1000 cells calculate the culture volume and cell number of needs, draw after mixing well corresponding celliferous complete
Full culture medium kind is placed in 37 DEG C of incubator cultures in 6 orifice plates.
Processing: need to handle cell in each hole by experiment after adherent.
Fixed: culture sucked supernatant after 14 days, was washed 3 times with PBS, and the fixed cell 30min of 4% paraformaldehyde is added.
Dyeing: cells rinsed with PBS 3 times after fixed, 0.1% crystal violet solution 1ml is added and dyes 30min, clear water is washed
Removal floating color is placed at dry and ventilated and dries, and camera is taken pictures.
4. active oxygen detects
Bed board: will be precipitated after cell dissociation, centrifugation, complete medium is added, cell is resuspended, complete by every hole 200ul
Culture medium, 2000 cells calculate the culture volume and cell number of needs, draw after mixing well corresponding celliferous
Complete medium kind is placed in 37 DEG C of incubator overnight incubations in 96 orifice plates.
Processing: next day needs to handle corresponding cell by experiment.
Load probe: according to DCFH-DA: serum-free medium=1:1000 dilutes DCFH-DA.Cell culture fluid is removed,
The DCFH-DA that has diluted of 100ul is added in every hole, in being incubated for 20 minutes in 37 DEG C of cell incubators.Use serum-free cell culture
Liquid washs cell three times, does not enter intracellular DCFH-DA with abundant removal.
Detection: it using fluorescence inverted microscope observation, takes pictures.
5. Apoptosis detects
Digestion, centrifugation: after needing to give cell respective handling by experiment, with without EDTA pancreatin by cell dissociation, from
Supernatant is removed after the heart, is centrifuged again after PBS washing is added, is left and taken precipitating.
According to pure water |: 10 × Binding Buffer=9:1 configures Binding Buffer.Every solencyte is added 1ml and matches
The Binding Buffer set is centrifuged after washing by 300g 10min, removes supernatant.
Cell concentration is adjusted to 1 × 10 with Binding Buffer6/ ml, and draw 100ul cell suspension and be placed in sample
Guan Zhong.
Dyeing: 5ul Annexin V-FITC solution is added in every pipe, and after room temperature is protected from light incubation 10min, 5ul is added in every pipe
PI solution, room temperature, which is protected from light, is incubated for 5min.
Detection: the every pipe of sample after dyeing is resuspended after 500ul PBS is added, in using flow cytomery sample in 1h.
6. Matrigel
Paving glue: Matrix stoste is diluted to 10%Matrix solution with the RPMI-1640 culture medium of serum-free.In upper chamber
100ul 10%Matrix solution is added, pipette tips are in advance in 4 degree of refrigerator cool overnights.2h is incubated for solution solidification in 37 DEG C of incubators
For gel.
Bed board: will be precipitated after cell dissociation, centrifugation, and the RPMI-1640 culture medium without fetal calf serum is added and is resuspended
Cell, by every hole 200ul complete medium, 1 × 105A cell calculates the culture volume and cell number of needs, sufficiently mixed
Corresponding cell suspension cover plant is drawn after even in the matrigel surface of upper chamber, the RPMI- for containing 10% fetal calf serum is added in lower room
1640 culture mediums, in 37 DEG C incubator culture 24-48 hours.
It is fixed: to take out cell after 48h and suck upper chamber liquid, the cell of film is secured across using 4% paraformaldehyde
30min。
Dyeing: 30min is dyed using 0.1% crystal violet solution.
As a result with inverted microscope observation, acquisition.
7. cell scratch experiment
Bed board: will be precipitated after cell dissociation, centrifugation, and the RPMI-1640 containing 10% fetal calf serum is added and cultivates base weight
Cell is pressed 5 × 10 by outstanding cell5/ hole density kind enters in 6 orifice plates, is placed in 37 DEG C of incubator cultures.
Scratch: marking scratch with the vertical ware bottom of 200ul pipette tips after cell covers with ware bottom, washes away drift with PBS rinse ware bottom
Floating cell is added the RPMI-1640 culture medium containing 2% fetal calf serum and is cultivated.
Observation: respectively at 0h, for 24 hours, 48h using inverted microscope observe scratch healing state, shooting, collecting.
8. quantitative fluorescent PCR
The extraction of 8.1RNA
Centrifuge is pre-chilled in half an hour in advance.The supernatant for discarding the cell of RNA to be mentioned is pre-chilled in right amount with suction pipe absorption
PBS solution is added in adherent cell, jiggles and discards solution afterwards for several times, is repeated 3 times, for the last time need to be thorough with liquid-transfering gun
Exhaust PBS.LmlTrizol solution is added, jiggling makes the entire ware bottom of Trizol solution uniform fold, and cell is placed in 4.C
It is shaken slowly on shaking table.After about 20-30min, lysate is drawn with liquid-transfering gun and blows and beats cell aufwuchsplate repeatedly, liquid is transferred to
1.5ml is gone in the EP pipe of RNA enzyme.
The chloroform (chloroform) of 1/5 lysate volume (200u1) is added into EP pipe, gently overturns concussion up and down
Lmin is stored at room temperature 5min.
EP pipe is placed in micro refrigerated centrifuge, 4 DEG C of centrifugation 15min of 12000rpm.
After the completion of centrifugation, the bright liquid (remaining to discard) in 350ul volume upper layer is carefully slowly drawn with liquid-transfering gun,
The new standby 1.5ml capacity of injection is gone in enzyme EP pipe, then isometric aqueous isopropanol (350u1) is continuously added into the pipe,
It is mixed by inversion about 1min repeatedly after covering EP pipe lid, is then allowed to stand about 10min.
EP pipe is placed in refrigerated centrifuge, 4 DEG C of centrifugation 10min of 12000rpm.
Supernatant liquid is discarded after centrifugation, 75% ethyl alcohol (dehydrated alcohol: DEPC water=3:1 is prepared) that 1ml pre-cooling is added is clear
Wash precipitating.
In refrigerated centrifuge, 4 DEG C of centrifugation 5min of 12000rpm.
Supernatant liquid is carefully slowly drawn with liquid-transfering gun and is discarded, and avoids touching precipitating, then carefully drawn with filter paper
It is retained in the micro liquid of tube wall, is finally placed in drying precipitating in Biohazard Safety Equipment.
Become transparent gel-shaped to visually precipitate, 5~15ul is added toward EP tube bottom and goes RNA enzyme water dissolution precipitating.
Use the purity and concentration of the proposed sample RNA of spectrophotometric determination.The zeroing of lul deionized water standard is inhaled first,
Then the extracted RNA sample of lul, measurement result are inhaled.When entering 260/280 ratio numerical value greater than 1.8, then being included in research can be after
The experiment of continuous next step, otherwise discards mentioned RNA sample, extracts again.Record the concentration of the RNA that all samples measure and pure
Degree has marked title and the extraction time of sample, and 80 DEG C of refrigerators are given in placement can be reserved for half a year.
8.2 reverse transcription step
Reverse transcription using Japan Takara Reverse Transcriptase kit, by qualification RNA immediately reverse transcription at cDNA.It is reacted
System is 10ul, as follows:
Remove RNA enzyme water |
7ul |
5×PrimeScript RT Master Mix |
2ul |
RNA |
1ul |
Concentration is diluted to 500 units or so with deionized water by the RNA sample proposed, then each reverse transcription system
The RNA sample 1ul is added, then calculates and needs to be added the volume of the deionized water of whole system polishing to 10ul.Reference table
2.4 sequentially add corresponding reagent in the EP pipe for going RNA enzyme with dosage in order, and slightly brief centrifugation is gathered in by all liq
The tube bottom of EP pipe forbids bubble occur.It is immediately placed into reverse transcription machine, setting " 37 DEG C of 15min, 85 DEG C of 3s, 4 DEG C unlimited "
Condition is reacted.After the completion of reverse transcription, 30ul is added into each small EP pipe respectively, the dilution mixing of enzyme water is gone to be placed on 4 DEG C
Refrigerator cold-storage is spare.
The primer sequence is as follows in experiment:
8.3qRT-PCR
Reagent required for reaction system (10ul) is added according to following table carries out qRT-PCR:
Remove RNA enzyme water |
3.6ul |
Upstream primer |
0.2ul |
Downstream primer |
0.2ul |
Taq enzyme |
5ul |
cDNA |
1ul |
Prepare corresponding EP pipe respectively according to testing gene, is prepared respectively according to four kinds of reagents before upper table, after Taq enzyme is added
All steps will be protected from light.By the transient liquid centrifugation in each EP pipe, it is uniformly mixed it then accurate with micropipette rifle
9ul is drawn on ground, and the hole wall along PCR amplification plate is squeezed into completely, is each all provided with 3 multiple holes, then dilute toward each hole corresponding 1ul of addition
CDNA after releasing guarantees that additional amount is accurate.Finally in the dedicated pad pasting close adhesion plate of PCR plate, each loading hole is completely covered in guarantee,
Then 1000rpm5min is centrifuged in centrifuge, finally PCR plate is put into Roche quantitative fluorescence PCR instrument, upper machine testing, is selected
Specific amplification program is selected, computer is waited to export result.
9. immunofluorescence dyeing
Kind ware: supernatant will be removed after cell dissociation, centrifugation, is adjusted cell density to 1 × 10 with complete medium5A/
Ml, and 1ml cell suspension inoculation cell is drawn in the burnt dedicated ware of copolymerization, cell is carefully shaken up, 37 DEG C of incubator cultures are placed in.
After needing to handle cell by experiment, cell 2 times are cleaned with the PBS solution after filtration, each 5min.
The 4% fixed cell 30min of paraformaldehyde solution 400ul is added.
PBS is added to clean 3 times, it is every all over 5min.
0.5% triton x-100 of 400ul filtering PBS configuration, room temperature rupture of membranes 10min is added.
It continuously adds PBS to wash 3 times, each 5min.
5%BSA solution 400ul room temperature is added and closes 30min.
The primary antibody working solution that 5%BSA is prepared is added, is incubated overnight in 4 DEG C of refrigerators;E-cadherin,vimentin,
MACC1 and DLC3 primary antibody dilution ratio is adjusted according to product description.
Next day takes out cell, sucks primary antibody working solution after being stored at room temperature rewarming 1h, and PBS is added and washs 5 times, each 3min.
The fluorescence secondary antibody working solution of corresponding kind source property is added, room temperature, which is protected from light, is incubated for 1h.
Secondary antibody working solution is discarded, PBS is added and washs 5 times, each 3min.
500ul 5ug/ml DAPI solution is added, is stored at room temperature dyeing 10min.
PBS is added to wash 5 times, each 3min.
The PBS solution of 400ul is eventually adding to keep ware bottom wet, is observed under Laser Scanning Confocal Microscope and acquires image.
10. zoopery
The BALB/c nude mice that zoopery is used is 4 week old, male, purchased from Nanfang Medical Univ's animal experiment study
The heart.
10.1 mouse subcutaneous tumors models
Nude mice is grouped at random by experimental design, every group at least 5.Precipitating will be washed with PBS after cell dissociation, and with
1000rpm is centrifuged 3min, in triplicate.The cell for eliminating serum is prepared into 1 × 108The cell suspension of a/ml, takes
100ul cell suspension is subcutaneously injected in mouse right hind root row.After being inoculated with subcutaneous tumors the 6th day, measurement mouse is swollen within every 2 days
The longest diameter (L) and shortest diameter (W) of tumor, and calculate gross tumor volume V (cm3)=(L × W2The growth curve of subcutaneous tumors is made in)/2.
After subcutaneous tumor formation 30 days, takes off cervical approach and put to death nude mice, collect subcutaneous tumors body tissue, weigh and photograph to record.
10.2 Lung metastases model
Nude mice is grouped at random by experimental design, every group at least 5.Cell precipitation will be resuspended with PBS after cell dissociation, and
Supernatant is removed after being centrifuged 3min with 1000 turns/min, in triplicate.The cell for removing serum is prepared into 5 × 107A/ml's is thin
Born of the same parents' suspension.Mousetail is immersed in 1min in pre-prepd warm water, dress mouse enters fixator after tail veins expansion, makes tail
It bar is exposed to outside fixator.Cotton ball soaked in alcohol disinfection tail portion is given, takes 100ul cell suspension to be slowly injected into mouse tail vein, after 4 weeks
Mouse is put to death, collected, fixed mouse lung tissue and photograph to record.
10.3 liver metastasis models
Nude mice is grouped at random by experimental design, and every group at least 5.By after cell dissociation with PBS be resuspended cell precipitation, and with
Supernatant is removed after 1000 turns/min centrifugation 3min, in triplicate.The cell for removing serum is prepared into 6 × 107The cell of a/ml
Suspension.Mouse takes right lateral position, makees an about 0.8cm skin incision in left arcus costarum lower edge, successively cuts off fascia and muscle, use is anodontia
Tweezer gently clamps mouse spleen, pulls out and is exposed to outside body cavity, 100ul cell suspension is extracted with insulin needle, from spleen lower edge
End parallel inserting needle about 0.3-0.5cm, slowly injects cell.It is given after having injected at alcohol cotton stick compressing spleen inserting needle one minute,
Sutures are given again to sew up the incision.Postoperative second day rises and gives Lovastatin 100mg/kg weight stomach-filling, and mouse is put to death after 4 weeks, receives
Collection, fixed mouse liver and spleen tissue simultaneously photograph to record.