CN109402086B - 2-methylbutyrate side chain hydrolase, expression strain and application thereof - Google Patents
2-methylbutyrate side chain hydrolase, expression strain and application thereof Download PDFInfo
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- CN109402086B CN109402086B CN201810114102.4A CN201810114102A CN109402086B CN 109402086 B CN109402086 B CN 109402086B CN 201810114102 A CN201810114102 A CN 201810114102A CN 109402086 B CN109402086 B CN 109402086B
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- side chain
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- pcest
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- aspergillus
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Abstract
Description
技术领域technical field
本发明属于蛋白质工程和医药生产领域,涉及一种2-甲基丁酸侧链水解酶以及能够生产莫纳可林J的菌株。The invention belongs to the fields of protein engineering and pharmaceutical production, and relates to a 2-methylbutyric acid side chain hydrolase and a strain capable of producing monacolin J.
背景技术Background technique
心脑血管疾病严重威胁人类健康,其发病率和死亡率在许多国家和地区排名第一。高脂血症(高胆固醇血症)是心脑血管疾病的一个重要诱因,因此预防高脂血症、调节血脂和降低血脂成为防治心脑血管疾病的关键。基于上述原因,降胆固醇药物具有很大的市场前景,多年来一直位于全球畅销药物的前列。Cardiovascular and cerebrovascular diseases are a serious threat to human health, and their morbidity and mortality ranks first in many countries and regions. Hyperlipidemia (hypercholesterolemia) is an important cause of cardiovascular and cerebrovascular diseases. Therefore, preventing hyperlipidemia, regulating blood lipids and reducing blood lipids have become the keys to preventing and treating cardiovascular and cerebrovascular diseases. Based on the above reasons, cholesterol-lowering drugs have great market prospects and have been at the forefront of the world's best-selling drugs for many years.
辛伐他汀(Simvastatin)即舒降之(Zocor),是Merck公司研发的一种重要的降血脂药物,能有效地抑制胆固醇的体内合成,是治疗高脂血症的首选药物之一。辛伐他汀的合成是以土曲霉的发酵产物洛伐他汀(lovastatin)为原料,通过化学合成的。在辛伐他汀的合成过程中,需要先去除洛伐他汀C8位的2-甲基丁酸侧链,获得莫纳可林J(Monacolin J),然后再通过后续工艺将2,2-二甲基丁酸侧链添加到莫纳可林J的C8位上,从而获得辛伐他汀。由此可见,莫纳可林J是辛伐他汀合成的重要前体物。目前,辛伐他汀的合成路线中,采用化学方法水解洛伐他汀制备莫纳可林J,整个制备过程中会使用到大量的酸、碱和有机试剂,工艺复杂、耗时长、收率低、污染压力大。Simvastatin (Zocor) is an important hypolipidemic drug developed by Merck, which can effectively inhibit the synthesis of cholesterol in the body and is one of the first-choice drugs for the treatment of hyperlipidemia. The synthesis of simvastatin is chemically synthesized from the fermentation product of Aspergillus terreus, lovastatin. In the synthesis process of simvastatin, it is necessary to remove the 2-methylbutyric acid side chain at the C8 position of lovastatin first to obtain Monacolin J (Monacolin J), and then the 2,2-dimethylbutyric acid is converted into 2,2-dimethyl by subsequent processes. A side chain of butyric acid is added to the C8 position of monacolin J to obtain simvastatin. It can be seen that monacolin J is an important precursor for the synthesis of simvastatin. At present, in the synthetic route of simvastatin, the chemical method is used to hydrolyze lovastatin to prepare monacolin J. A large number of acids, bases and organic reagents are used in the whole preparation process. The process is complicated, time-consuming, low yield, Pollution pressure is high.
2-甲基丁酸侧链水解酶可以水解洛伐他汀的侧链酯键断裂,生成莫纳可林J和2-甲基丁酸。Komagata等人于1986年在真菌Emericella unguis的菌丝体中纯化出了一种2-甲基丁酸侧链水解酶,该酶的转化效率约为86%。在接下来的几十年中,研究人员又陆续发现了多个2-甲基丁酸侧链水解酶,然而这些酶的催化效率较低,存在明显的底物抑制现象,并且关于酶的蛋白序列和相关编码基因信息都未被鉴定,因此无法直接对其进行利用和改造,这些问题都大大地限制了该酶在大规模工业生产中的应用。2-Methylbutyric acid side chain hydrolase can hydrolyze the ester bond of lovastatin side chain to generate monacolin J and 2-methylbutyric acid. In 1986, Komagata et al. purified a 2-methylbutyric acid side-chain hydrolase from the mycelium of the fungus Emericella unguis with a conversion efficiency of about 86%. In the following decades, researchers successively discovered a number of 2-methylbutyrate side chain hydrolases. However, these enzymes have low catalytic efficiency, obvious substrate inhibition, and the protein Neither the sequence nor the related coding gene information has been identified, so it cannot be directly utilized and modified. These problems greatly limit the application of this enzyme in large-scale industrial production.
本申请发明人于2017年报道了一种2-甲基丁酸侧链水解酶PcEST(SEQ ID NO:1),它能够有效水解洛伐他汀的2-甲基丁酰侧链生成莫纳可林J和2-甲基丁酸,其催化效率显著高于之前报道的洛伐他汀侧链水解酯酶(WO2005040107A2)。此外,通过在高产洛伐他汀土曲霉菌株中过表达PcEST,使得洛伐他汀在体内合成后即被水解成莫纳可林J,从而获得了能够直接发酵生产莫纳可林J的曲霉工程菌株,可以建立一步发酵直接生产莫纳可林J的新工艺(Huang XN,Liang YJ,Yang Y,Lu XF.Single-step production of thesimvastatin precursor monacolin J by engineering of an industrial strain ofAspergillus terreus.Metab.Eng.,2017,42,109-114)。但是该工程菌株中洛伐他汀水解率约为95%,仍然有约5%的洛伐他汀残留,这会增加后续分离纯化的成本。因此,构建一个能高效合成莫纳可林J而又没有洛伐他汀残留的工程菌株非常有必要,可以进一步简化辛伐他汀生产工艺,降低生产成本。The inventor of the present application reported a 2-methylbutyric acid side chain hydrolase PcEST (SEQ ID NO: 1) in 2017, which can effectively hydrolyze the 2-methylbutyryl side chain of lovastatin to generate monac Lin J and 2-methylbutyric acid, with significantly higher catalytic efficiency than previously reported lovastatin side-chain hydrolysis esterase (WO2005040107A2). In addition, by overexpressing PcEST in a high-yielding lovastatin Aspergillus terreus strain, lovastatin is hydrolyzed into monacolin J after it is synthesized in vivo, thereby obtaining an Aspergillus engineered strain capable of directly fermenting and producing monacolin J , a new process for the direct production of monacolin J by one-step fermentation can be established (Huang XN, Liang YJ, Yang Y, Lu XF. Single-step production of the simvastatin precursor monacolin J by engineering of an industrial strain of Aspergillus terreus. Metab.Eng. , 2017, 42, 109-114). However, the hydrolysis rate of lovastatin in the engineered strain is about 95%, and about 5% of lovastatin remains, which will increase the cost of subsequent separation and purification. Therefore, it is very necessary to construct an engineered strain that can efficiently synthesize monacolin J without lovastatin residue, which can further simplify the production process of simvastatin and reduce the production cost.
发明内容SUMMARY OF THE INVENTION
本发明的目的是提供一种新的2-甲基丁酸侧链水解酶,它改善了PcEST可溶性表达的效果和热稳定性,同时进一步提高其催化活性,使其能够更好地应用于工业生产,解决上述现有技术问题。The purpose of the present invention is to provide a new 2-methylbutyric acid side chain hydrolase, which improves the soluble expression effect and thermal stability of PcEST, and further improves its catalytic activity, so that it can be better used in industry production to solve the above-mentioned prior art problems.
在第一个方面,本发明提供一种2-甲基丁酸侧链水解酶,是通过定点突变野生型PcEST(SEQ ID NO:1)得到的突变体,突变位点是第140位,突变形式为Q140L,即,所述2-甲基丁酸侧链水解酶的序列如SEQ ID NO:2所示。In a first aspect, the present invention provides a 2-methylbutyric acid side chain hydrolase, which is a mutant obtained by site-directed mutation of wild-type PcEST (SEQ ID NO: 1), the mutation site is the 140th position, and the mutation The format is Q140L, ie, the sequence of the 2-methylbutyrate side chain hydrolase is shown in SEQ ID NO:2.
在本申请文件中,如无具体说明,PcEST/Q140L缩写为Q140L,表示蛋白突变体。本领域技术人员根据上下文内容,可以清楚地区分Q140L表示的是突变形式还是突变体。In this application document, unless otherwise specified, PcEST/Q140L is abbreviated as Q140L, which means protein mutant. Those skilled in the art can clearly distinguish whether Q140L represents a mutant form or a mutant according to the context.
本申请文件中,氨基酸、核苷酸的缩写有本领域通用的含义。In this application document, the abbreviations of amino acids and nucleotides have the meanings commonly used in the art.
第二个方面,提供与本发明的2-甲基丁酸侧链水解酶相关的生物材料,为:A second aspect provides biological materials relevant to the 2-methylbutyric acid side chain hydrolase of the present invention, which are:
(1)核酸分子,所述核酸分子编码本发明的2-甲基丁酸侧链水解酶;优选地,所述核酸分子为pcest/Q140L,其序列如SEQ ID NO:3所示;或者(1) a nucleic acid molecule, the nucleic acid molecule encodes the 2-methylbutyric acid side chain hydrolase of the present invention; preferably, the nucleic acid molecule is pcest/Q140L, the sequence of which is shown in SEQ ID NO: 3; or
(2)包含(1)所述核酸分子的表达盒、重组载体、重组细胞或重组微生物;(2) an expression cassette, recombinant vector, recombinant cell or recombinant microorganism comprising the nucleic acid molecule of (1);
优选地,所述微生物为曲霉菌株,其能够生产莫纳可林J。Preferably, the microorganism is an Aspergillus strain capable of producing monacolin J.
关于上述生物材料,本领域技术人员根据提供的2-甲基丁酸侧链水解酶的氨基酸序列可以知晓编码该酶的核酸分子的序列,并能够容易地选择、制备和使用包含所述核酸分子从而表达蛋白的表达盒、重组载体、重组细胞和重组微生物。Regarding the above-mentioned biological materials, those skilled in the art can know the sequence of the nucleic acid molecule encoding the enzyme based on the amino acid sequence of the 2-methylbutyrate side chain hydrolase provided, and can easily select, prepare and use the nucleic acid molecule containing the enzyme. Thereby expressing protein expression cassettes, recombinant vectors, recombinant cells and recombinant microorganisms.
第三个方面,提供本发明的2-甲基丁酸侧链水解酶在水解含有2-甲基丁酸侧链的他汀类物质中的应用;优选地,所述含有2-甲基丁酸侧链的他汀类物质为洛伐他汀、美伐他汀或普伐他汀;进一步优选地,所述他汀类物质为酸式、内酯式或盐式。A third aspect provides the application of the 2-methylbutyric acid side chain hydrolase of the present invention in the hydrolysis of statins containing 2-methylbutyric acid side chains; preferably, the 2-methylbutyric acid-containing The statin in the side chain is lovastatin, mevastatin or pravastatin; further preferably, the statin is in acid form, lactone form or salt form.
第四个方面,提供构建上述产莫纳可林J的曲霉菌株的方法,包括将出发曲霉菌株原生质体与包含编码本发明的2-甲基丁酸侧链水解酶的核酸分子的DNA片段共转化,经筛选后得到。优选地,所述出发曲霉菌株为曲霉菌(Aspergillus sp.)HZ01,其保藏编号为CGMCC NO.12970。A fourth aspect provides a method for constructing the above-mentioned Aspergillus strain producing monacolin J, comprising co-coagulating the Aspergillus strain protoplast with a DNA fragment comprising a nucleic acid molecule encoding the 2-methylbutyrate side chain hydrolase of the present invention transformation, obtained after screening. Preferably, the Aspergillus sp. strain is Aspergillus sp. HZ01, whose deposit number is CGMCC NO.12970.
本发明中使用的出发曲霉菌(Aspergillus sp.)HZ01于2016年10月17日保藏于中国微生物菌种保藏管理委员会普通微生物中心(CGMCC),保藏编号为CGMCC NO.12970,保藏中心地址为北京市朝阳区北辰西路1号院3号。Aspergillus sp. HZ01 used in the present invention was deposited in the General Microorganism Center (CGMCC) of the China Microorganism Culture Collection Management Committee on October 17, 2016, and the deposit number is CGMCC NO.12970, and the address of the deposit center is Beijing No. 3, Yard 1, Beichen West Road, Chaoyang District.
曲霉菌株原生质体的制备、原生质体与DNA片段的共培养、阳性曲霉菌的筛选等都是本领域的常规技术。Preparation of protoplasts of Aspergillus strains, co-culture of protoplasts and DNA fragments, screening of positive Aspergillus species, etc. are all routine techniques in the art.
优选地,所述编码本发明的2-甲基丁酸侧链水解酶的核酸分子的序列如SEQ IDNO:3所示。Preferably, the sequence of the nucleic acid molecule encoding the 2-methylbutyrate side chain hydrolase of the present invention is shown in SEQ ID NO:3.
第五个方面,提供本发明的核酸分子或包含所述核酸分子的表达盒、重组载体、重组细胞或重组微生物在制备产莫纳可林J的曲霉菌株中的应用。The fifth aspect provides the use of the nucleic acid molecule of the present invention or an expression cassette comprising the nucleic acid molecule, a recombinant vector, a recombinant cell or a recombinant microorganism in the preparation of a monacolin J-producing Aspergillus strain.
第六个方面,提供一种制备莫纳可林J的方法,包括发酵培养本发明提供的曲霉菌株,或者用本发明提供的2-甲基丁酸侧链水解酶水解洛伐他汀。A sixth aspect provides a method for preparing monacolin J, comprising fermenting and culturing the Aspergillus strain provided by the present invention, or hydrolyzing lovastatin with the 2-methylbutyric acid side chain hydrolase provided by the present invention.
第七个方面,提供上述本发明的生物材料或曲霉菌株或其菌悬液或其发酵液或其代谢产物在制备莫纳可林J中的应用。The seventh aspect provides the application of the above-mentioned biological material or Aspergillus strain or bacterial suspension or fermentation broth or metabolite thereof of the present invention in the preparation of monacolin J.
第八个方面,提供上述本发明的生物材料或曲霉菌株或其菌悬液或其发酵液或其代谢产物在生产降血脂药物中的应用,其中所述降血脂药物是辛伐他汀。In an eighth aspect, there is provided the use of the above-mentioned biological material or Aspergillus strain or bacterial suspension or fermentation broth or metabolite thereof of the present invention in the production of a hypolipidemic drug, wherein the hypolipidemic drug is simvastatin.
本发明提供的2-甲基丁酸侧链水解酶与野生型酶相比,酶活提高,高出约2倍,对温度的稳定性提高,简化了辛伐他汀的生产工艺,减少生产成本,更有利于工业化应用。Compared with the wild-type enzyme, the 2-methylbutyric acid side chain hydrolase provided by the invention has improved enzyme activity, about 2 times higher, improved temperature stability, simplified the production process of simvastatin, and reduced production costs , more conducive to industrial applications.
附图说明Description of drawings
图1:A是野生型和突变体蛋白纯化结果的电泳分析图;B是酶活测定结果图,酶活力单位定义为每分钟催化产生1微摩尔莫纳可林J所需的酶量为一个活力单位(U)。图中的纵坐标表示的是每毫克酶蛋白所含有的酶活力单位数。WT:野生型PcEST;Q140L:PcEST/Q140L突变体。Figure 1: A is the electrophoresis analysis of the purification results of wild-type and mutant proteins; B is the result of enzyme activity assay. The unit of enzyme activity is defined as the amount of enzyme required to catalyze the production of 1 μmol of monacolin J per minute. Vitality unit (U). The ordinate in the figure represents the number of enzyme activity units per milligram of enzyme protein. WT: wild-type PcEST; Q140L: PcEST/Q140L mutant.
图2:野生型和突变体蛋白可溶性表达的电泳分析图,WT:野生型PcEST;Q140L:PcEST/Q140L突变体。S:可溶性蛋白部分;I:不可溶性蛋白部分。Figure 2: Electrophoretic analysis of soluble expression of wild-type and mutant proteins, WT: wild-type PcEST; Q140L: PcEST/Q140L mutant. S: soluble protein fraction; I: insoluble protein fraction.
图3:野生型和突变体蛋白的热稳定性分析图,WT:野生型PcEST;Q140L:PcEST/Q140L突变体。Figure 3: Thermal stability analysis plot of wild type and mutant proteins, WT: wild type PcEST; Q140L: PcEST/Q140L mutant.
图4:pG3H的质粒图谱示意图。Figure 4: Schematic representation of the plasmid map of pG3H.
图5:过表达PcEST/Q140L的曲霉转化子的基因组PCR验证结果;其中,1#、2#、7#、8#、9#、10#、11#、13#为阳性转化子,C为质粒pG3H-pcest/Q140L,wt为对照菌株HZ01菌株。Figure 5: Genome PCR verification results of Aspergillus transformants overexpressing PcEST/Q140L; wherein, 1#, 2#, 7#, 8#, 9#, 10#, 11#, 13# are positive transformants, and C is Plasmid pG3H-pcest/Q140L, wt is the control strain HZ01 strain.
图6:过表达野生型PcEST的曲霉转化子的基因组PCR验证结果;其中,1#、4#、5#为阳性转化子,C为质粒pG3H-pcest,wt为对照菌株HZ01菌株。Figure 6: Genome PCR verification results of Aspergillus transformants overexpressing wild-type PcEST; among them, 1#, 4#, and 5# are positive transformants, C is plasmid pG3H-pcest, and wt is control strain HZ01 strain.
图7:各菌株第8天样品的HPLC分析;其中,HZ01为野生型菌株,HZ-PcEST为过表达野生型PcEST的对照菌株,HZ-PcEST/Q140L是过表达PcEST/Q140L突变体的曲霉工程菌株,其中图B是图A的局部放大示意图。Figure 7: HPLC analysis of the 8th day samples of each strain; wherein, HZ01 is a wild-type strain, HZ-PcEST is a control strain overexpressing wild-type PcEST, and HZ-PcEST/Q140L is an Aspergillus project overexpressing a PcEST/Q140L mutant strains, wherein panel B is a partially enlarged schematic view of panel A.
图8:各菌株第8天发酵样品中洛伐他汀和莫纳可林J的含量;其中,HZ01为野生型菌株,HZ-PcEST系列为过表达野生型PcEST的对照菌株,Q140L系列是过表达PcEST/Q140L突变体的曲霉工程菌株。Figure 8: Contents of lovastatin and monacolin J in fermentation samples of each strain on the 8th day; among them, HZ01 is a wild-type strain, HZ-PcEST series is a control strain overexpressing wild-type PcEST, and Q140L series is an overexpressing strain Aspergillus engineered strains of the PcEST/Q140L mutant.
具体实施方式Detailed ways
下面将结合具体实施例来描述本发明内容。如无明确说明,以下实施例中使用的试剂、仪器均是本领域常规试剂、仪器,可以通过商购途径获得;所使用的方法也是常规方法,本领域技术人员根据说明书内容,可以明确地知道如何完成所述实验,获得相应的结果。The content of the present invention will be described below with reference to specific embodiments. Unless otherwise specified, the reagents and instruments used in the following examples are conventional reagents and instruments in the art, and can be obtained through commercial channels; the methods used are also conventional methods, and those skilled in the art can clearly know from the contents of the description. How to complete the experiment and obtain the corresponding results.
本发明中质粒提取采用OMEGA公司Plasmid Mini Kit I试剂盒(D6942-01),DNA片段回收是采用OMEGA公司Cycle-Pure Kit试剂盒(D6492-01),凝胶回收是采用OMEGA公司Gel Extraction Kit试剂盒(D2500-01)。In the present invention, plasmid extraction adopts OMEGA company Plasmid Mini Kit I kit (D6942-01), DNA fragment recovery adopts OMEGA company Cycle-Pure Kit kit (D6492-01), and gel recovery adopts OMEGA company Gel Extraction Kit reagent Box (D2500-01).
CD培养基组成为:3g/L NaNO3,2g/L KCl,1g/L KH2PO4,0.5g/L MgSO4·7H2O,0.02g/L FeSO4·7H2O,10g/L葡萄糖。The composition of CD medium is: 3g/L NaNO 3 , 2g/L KCl, 1g/L KH 2 PO 4 , 0.5g/L MgSO 4 ·7H 2 O, 0.02g/L FeSO 4 ·7H 2 O, 10g/L glucose.
CD平板培养基组成为:3g/L NaNO3,2g/L KCl,1g/L KH2PO4,0.5g/L MgSO4·7H2O,0.02g/L FeSO4·7H2O,10g/L葡萄糖,1.5g/L琼脂。The composition of CD plate medium is: 3g/L NaNO 3 , 2g/L KCl, 1g/L KH 2 PO 4 , 0.5g/L MgSO 4 ·7H 2 O, 0.02g/L FeSO 4 ·7H 2 O, 10g/L L glucose, 1.5g/L agar.
IPM液体培养基:60g L-1葡萄糖,2g L-1NH4NO3,20mg L-1(NH4)2HPO4,20mg L-1FeSO4,0.4g L-1MgSO4,4.4mg L-1ZnSO4,0.5g/L玉米浆,pH 3.5。IPM liquid medium: 60 g L -1 glucose, 2 g L -1 NH 4 NO 3 , 20 mg L -1 (NH 4 ) 2 HPO 4 , 20 mg L -1 FeSO 4 , 0.4 g L -1 MgSO 4 , 4.4 mg L -1 ZnSO 4 , 0.5 g/L corn steep liquor, pH 3.5.
洛伐他汀发酵种子培养基:9g L-1葡萄糖,10g L-1蔗糖,1g L-1酵母抽提物,1g L-1蛋白胨,1g L-1乙酸钠,0.04g L-1KH2PO4,0.1g L-1MgSO4,5g L-1豆粕,1.5g L-1碳酸钙,pH6.8。Lovastatin Fermentation Seed Medium: 9g L -1 glucose, 10g L -1 sucrose, 1g L -1 yeast extract, 1g L -1 peptone, 1g L -1 sodium acetate, 0.04g L -1 KH 2 PO 4 , 0.1 g L -1 MgSO 4 , 5 g L -1 soybean meal, 1.5 g L -1 calcium carbonate, pH 6.8.
洛伐他汀发酵培养基:70g L-1葡萄糖,20g L-1蔗糖,1.5g L-1酵母抽提物,20g L-1蛋白胨,7g L-1乙酸钠,0.5g L-1KH2PO4,0.5g L-1MgSO4,5g L-1豆粕,5g L-1碳酸钙,泡敌(烟台恒鑫化工科技有限公司,型号THIX-298)0.1mL L-1,pH6.5。Lovastatin fermentation medium: 70g L -1 glucose, 20g L -1 sucrose, 1.5g L -1 yeast extract, 20g L -1 peptone, 7g L -1 sodium acetate, 0.5g L -1 KH 2 PO 4 , 0.5g L -1 MgSO 4 , 5g L -1 soybean meal, 5g L -1 calcium carbonate, foam Di (Yantai Hengxin Chemical Technology Co., Ltd., model THIX-298) 0.1mL L -1 , pH 6.5.
实施例1:2-甲基丁酸侧链水解酶突变体的获得Example 1: Obtainment of 2-methylbutyrate side chain hydrolase mutants
1.2-甲基丁酸侧链水解酶突变体Q140L的构建1. Construction of 2-methylbutyrate side chain hydrolase mutant Q140L
(1)突变PCR:采用QuikChange方法进行定点突变。以pEASY-E2-pcest质粒(HuangXN,Liang YJ,Yang Y,Lu XF.(2017).Single-step production of the simvastatinprecursor monacolin J by engineering of an industrial strain of Aspergillusterreus.Metab.Eng.,42,109-114)为模板,根据突变位点设计并合成引物,进行PCR扩增,得到编码2-甲基丁酸侧链水解酶突变体的基因。(1) Mutation PCR: site-directed mutagenesis was performed using the QuikChange method. Take pEASY-E2-pcest plasmid (HuangXN, Liang YJ, Yang Y, Lu XF. (2017). Single-step production of the simvastatinprecursor monacolin J by engineering of an industrial strain of Aspergillusterreus. Metab.Eng., 42, 109-114) As a template, primers were designed and synthesized according to the mutation site, and PCR amplification was performed to obtain a gene encoding a 2-methylbutyrate side chain hydrolase mutant.
PCR反应体系为:无菌水32.5μL,模板DNA 1μL,5×PrimeSTAR HS缓冲液(Mg2+plus)10μL,dNTP混合液(各2.5mmol/L)4μL,突变引物对Q140L-F(5’-CAAAATGGCGCGCACTATACGCGAATCCGG-3’)和Q140L-R(5’-CCGGATTCGCGTATAGTGCGCGCCATTTTG-3’)各1μL(20pmol/μL),TaKaRa PrimeSTAR HS DNA聚合酶0.5μL。反应条件为:95℃预变性5min;94℃10s、60℃15s、72℃7.5min,18个循环;最后72℃延伸10min。The PCR reaction system was: sterile water 32.5 μL,
(2)酶切:将反应完成的PCR产物取出,按1:50(Dpn I酶:PCR产物,v:v)的比例加入Dpn I酶,37℃酶切1个小时。(2) Enzyme digestion: Take out the PCR product after the reaction, add Dpn I enzyme at a ratio of 1:50 (Dpn I enzyme:PCR product, v:v), and digest at 37°C for 1 hour.
(3)取出,转化至大肠杆菌BL21(DE3)感受态细胞,在含有卡那霉素(终浓度50μg/ml)的LB平板上涂布,37℃过夜培养。(3) Take out, transform into Escherichia coli BL21 (DE3) competent cells, spread on LB plates containing kanamycin (
转化子长出后,挑取单克隆送去测序,按照突变体的核苷酸序列SEQ ID NO:3所示突变形式筛选正确突变的菌株及其包含的对应载体pEASY-E2-pcest/Q140L。After the transformants were grown, single clones were picked and sent for sequencing, and the correct mutant strain and the corresponding vector pEASY-E2-pcest/Q140L contained therein were screened according to the mutant form shown in SEQ ID NO: 3 of the mutant nucleotide sequence.
2.野生型2-甲基丁酸侧链水解酶表达载体的构建:2. Construction of wild-type 2-methylbutyric acid side chain hydrolase expression vector:
通过常规PCR用引物1:5’GGAATTCCATATGGATACCACCTTTCAGGCG 3’和引物2:5’CCGCTCGAGTCACTGCTGACCTTTCCAGGC 3’分别从质粒pEASY-E2-pcest和pEASY-E2-pcest/Q140L上扩增到野生型PcEST基因pcest和PcEST/Q140L突变体基因pcest/Q140L,PCR产物纯化后用限制性内切酶Nde I和Xho I酶切,与经相同酶切的pET28a-smt3载体连接,得到的载体分别命名为pET-pcest和pET-pcest/Q140L,质粒分别转化大肠杆菌BL21(DE3)感受态细胞,挑取转化子,测序鉴定其基因序列。pcest/Q140L突变体序列如SEQ ID NO:3所示,野生型pcest如SEQ ID NO:4所示。The wild-type PcEST genes pcest and PcEST/Q140L were amplified by conventional PCR with primer 1: 5'GGAATTCCATATGGATACCACCTTTCAGGCG 3' and primer 2: 5'CCGCTCGAGTCACTGCTGACCTTTCCAGGC 3' from plasmids pEASY-E2-pcest and pEASY-E2-pcest/Q140L, respectively The mutant gene pcest/Q140L, the PCR product was purified and digested with restriction enzymes Nde I and Xho I, and then ligated with the pET28a-smt3 vector digested by the same enzyme, and the obtained vectors were named pET-pcest and pET-pcest respectively /Q140L, the plasmids were transformed into E. coli BL21 (DE3) competent cells, and the transformants were picked and sequenced to identify their gene sequences. The pcest/Q140L mutant sequence is shown in SEQ ID NO:3, and the wild-type pcest is shown in SEQ ID NO:4.
3.蛋白质的纯化3. Protein purification
培养表达野生型酶和突变体酶的大肠杆菌BL21(DE3),37℃培养至对数生长期,加入诱导剂异丙基-β-D-硫代半乳糖苷(IPTG,终浓度是0.2mM),16℃过夜诱导表达后,收集菌体,重悬于40ml Tris–HCl缓冲液(20mM,pH 8.0)中,超声破碎菌体,得到粗酶液,经过Ni-NTA进行纯化。收集蛋白,用Ulp1(Ulp1:PcEST质量比为1:50)过夜酶切,通过反挂Ni柱的方式继续纯化蛋白,绝大多数目标蛋白穿出Ni柱,而His-sumo与Ni柱结合较紧密,需要高浓度(250mM)的咪唑才能洗脱下来,因此可以获得纯蛋白质(图1A)。E. coli BL21 (DE3) expressing wild-type enzyme and mutant enzyme was cultured at 37°C to logarithmic growth phase, and the inducer isopropyl-β-D-thiogalactoside (IPTG) was added, the final concentration was 0.2mM ), after inducing expression overnight at 16°C, the cells were collected, resuspended in 40 ml of Tris-HCl buffer (20 mM, pH 8.0), and the cells were sonicated to obtain crude enzyme solution, which was purified by Ni-NTA. The protein was collected, digested with Ulp1 (Ulp1:PcEST mass ratio of 1:50) overnight, and continued to purify the protein by inverting the Ni column. Tight, high concentrations (250 mM) of imidazole are required to elute, so pure protein can be obtained (Figure 1A).
经测序,突变体酶的序列与预期的一致。After sequencing, the sequence of the mutant enzyme was as expected.
实施例2:测定酶活性Example 2: Determination of enzymatic activity
取实施例1制备的蛋白质进行酶活性测定。酶蛋白的浓度是0.05μM,底物洛伐他汀的浓度是400μM,37℃反应10分钟,利用HPLC测定生成的莫纳可林J。HPLC反应使用的色谱柱是Agilent ZORBAX XDB-C18(4.6×150mm,5μm),流动相是乙腈:0.1%磷酸(50:50,v:v)流速是1ml/min,进样10μl。结果如图1B所示,突变体Q140L的2-甲基丁酸侧链水解酶的酶活为野生酶的2.51倍。The protein prepared in Example 1 was used for enzyme activity assay. The concentration of the enzyme protein was 0.05 μM, the concentration of the substrate lovastatin was 400 μM, and the reaction was carried out at 37° C. for 10 minutes, and the produced monacolin J was measured by HPLC. The column used for the HPLC reaction was Agilent ZORBAX XDB-C18 (4.6×150 mm, 5 μm), the mobile phase was acetonitrile:0.1% phosphoric acid (50:50, v:v), the flow rate was 1 ml/min, and the injection was 10 μl. The results are shown in Figure 1B, the enzyme activity of the 2-methylbutyrate side chain hydrolase of the mutant Q140L was 2.51 times that of the wild enzyme.
实施例3:2-甲基丁酸侧链水解酶突变体酶性质测定Example 3: Determination of enzyme properties of 2-methylbutyrate side chain hydrolase mutants
1、2-甲基丁酸侧链水解酶野生型和突变体蛋白可溶性表达测定1. 2-Methylbutyrate side chain hydrolase wild-type and mutant protein soluble expression assay
培养编码野生型和突变体2-甲基丁酸侧链水解酶的大肠杆菌BL21(DE3)100ml,37℃培养至对数生长期,加入诱导剂异丙基-β-D-硫代半乳糖苷(IPTG,终浓度是0.2mM),在25℃条件下进行蛋白的诱导表达,过夜后收集菌液,超声破碎后离心,分开上清液和沉淀,沉淀部分加入相同体积的Tris–HCl缓冲液(50mM,pH 8.0)悬浮。取相同量的上清液和沉淀蛋白液进行SDS-PAGE蛋白电泳分析,结果如图2所示。绝大部分的野生型蛋白在沉淀部分,上清液部分只有很少量的PcEST蛋白,而突变体Q140L的上清液部分中PcEST的蛋白量明显增多,说明Q140L突变体蛋白的可溶性表达量相对于野生型有所提高。Cultivate 100ml of Escherichia coli BL21(DE3) encoding the wild-type and mutant 2-methylbutyrate side chain hydrolase, cultivate to logarithmic growth phase at 37℃, add the inducer isopropyl-β-D-galactothioate Glycoside (IPTG, final concentration is 0.2mM), protein expression was induced at 25°C, the bacterial solution was collected overnight, sonicated and centrifuged, the supernatant and the pellet were separated, and the same volume of Tris-HCl buffer was added to the pellet. solution (50mM, pH 8.0) for suspension. Take the same amount of supernatant and precipitated protein solution for SDS-PAGE protein electrophoresis analysis, the results are shown in Figure 2. Most of the wild-type protein is in the precipitate part, and there is only a small amount of PcEST protein in the supernatant part, while the amount of PcEST protein in the supernatant part of the mutant Q140L is significantly increased, indicating that the soluble expression of the Q140L mutant protein is relatively high. increased in wild type.
2、2-甲基丁酸侧链水解酶野生型和突变体蛋白的温度稳定性测定2. Determination of temperature stability of 2-methylbutyrate side chain hydrolase wild-type and mutant proteins
对PCR仪的反应槽温度条件进行设定,取出等量的野生型和突变体蛋白,放置在具有不同温度(20℃、22℃、25℃、28℃、30℃、32℃、35℃、37℃、40℃、42℃、45℃和50℃)的反应槽中,孵育10分钟,立即放置冰上冷却10分钟,然后从中取出蛋白进行酶活性测定,测定条件是:酶的浓度是0.05μM,底物洛伐他汀的浓度是400μM,37℃反应10分钟,利用HPLC测定生成的莫纳可林J。以不做温度处理的蛋白的活性为100%,计算蛋白经过不同温度处理后酶活性的相对值,绘制曲线。如图3所示,突变体Q140L的T50值比野生型提高了3℃。Set the temperature conditions of the reaction tank of the PCR instrument, take out equal amounts of wild-type and mutant proteins, and place them at different temperatures (20°C, 22°C, 25°C, 28°C, 30°C, 32°C, 35°C, 37°C, 40°C, 42°C, 45°C and 50°C), incubate for 10 minutes, immediately place on ice to cool for 10 minutes, and then remove the protein from it for enzyme activity assay. The assay conditions are: the concentration of the enzyme is 0.05 μM, the concentration of the substrate lovastatin was 400 μM, the reaction was carried out at 37° C. for 10 minutes, and the generated monacolin J was measured by HPLC. Taking the activity of the protein without temperature treatment as 100%, calculate the relative value of the enzyme activity of the protein after different temperature treatments, and draw a curve. As shown in Figure 3, the T50 value of the mutant Q140L was 3°C higher than that of the wild type.
实施例4:产莫纳可林J的曲霉菌株的构建Example 4: Construction of Monacolin J-producing Aspergillus strains
分别以pEASY-E2-pcest和实施例1构建的pEASY-E2-pcest/Q140L两种质粒为模板,用引物pcest-F1(5’-gatccatggataccacctttcaggc-3’)和pcest-R1(5’-gatgcggccgcgttagcagccggatctcagtg-3’)扩增野生型pcest和突变体pcest/Q140L基因片段,分别用限制性内切酶Nco I(Thermo,FD0573)和Not I(Thermo,FD0593)进行酶切并回收目的片段(1.2kb)。用限制性内切酶Pci I(Thermo,ER1871)和Not I对载体pG3H(图4,XuenianHuang,Xuefeng Lv,Jianjun Li*,Cloning and functional characterization of anative glyceraldehyde-3-phosphate dehydrogenase promoter for Aspergillusterreus,Journal of Industrial Microbiology and Biotechnology,2014,41(3):585-592)进行酶切,回收大小约为7.3kb的片段。将酶切回收后的pcest和pcest/Q140L片段分别和pG3H载体用T4连接酶进行连接,并转化大肠杆菌DH5a,PCR及测序验证正确的质粒分别记为pG3H-pcest和pG3H-pcest/Q140L。分别以pG3H-pcest和pG3H-pcest/Q140L为模板,用引物PgpdAt-F630(5’-catcatcgcattctccctctcg-3’)和TtrpC-R2(5’-ttactattgtatacccatcttag-3’)进行PCR扩增,获得PcEST的表达元件PgpdAt-pcest-TtrpC和PgpdAt-pcest/Q140L-TtrpC,该表达元件包括启动子PgpdAt、PcEST(或PcEST/Q140L)编码序列pcest(或pcest/Q140L)、终止子TtrpC,大小为2490bp,通过PCR产物回收试剂盒进行回收纯化。以质粒pPTR II(TAKARA,Catalog No.:3621)为模板,以ptrA-F(5’-gggcaattgattacgggatc-3’)和ptrA-R(5’-atggggtgacgatgagccgc-3’)作为引物扩增获得大小约为2.0kb的筛选标记吡啶硫胺抗性基因ptrA片段,经PCR产物回收试剂盒回收纯化。The two plasmids pEASY-E2-pcest and pEASY-E2-pcest/Q140L constructed in Example 1 were used as templates, and the primers pcest-F1 (5'-gatccatggataccacctttcaggc-3') and pcest-R1 (5'-gatgcggccgcgttagcagccggatctcagtg- 3') Amplify the wild-type pcest and mutant pcest/Q140L gene fragments, digest with restriction enzymes Nco I (Thermo, FD0573) and Not I (Thermo, FD0593) respectively, and recover the target fragment (1.2kb) . The vector pG3H (Figure 4, Xuenian Huang, Xuefeng Lv, Jianjun Li*, Cloning and functional characterization of anative glyceraldehyde-3-phosphate dehydrogenase promoter for Aspergillusterreus, Journal of Industrial Microbiology and Biotechnology, 2014, 41(3): 585-592) for enzyme digestion, and a fragment with a size of about 7.3 kb was recovered. The recovered pcest and pcest/Q140L fragments were ligated with pG3H vector using T4 ligase, respectively, and transformed into E. coli DH5a. The correct plasmids verified by PCR and sequencing were recorded as pG3H-pcest and pG3H-pcest/Q140L, respectively. Using pG3H-pcest and pG3H-pcest/Q140L as templates, PCR amplification was performed with primers PgpdAt-F630 (5'-catcatcgcattctccctctcg-3') and TtrpC-R2 (5'-ttactattgtatacccatcttag-3') to obtain the expression of PcEST Elements PgpdAt-pcest-TtrpC and PgpdAt-pcest/Q140L-TtrpC, the expression element includes promoter PgpdAt, PcEST (or PcEST/Q140L) coding sequence pcest (or pcest/Q140L), terminator TtrpC, the size is 2490bp, by PCR Product recovery kit for recovery and purification. Using plasmid pPTR II (TAKARA, Catalog No.: 3621) as a template, ptrA-F (5'-gggcaattgattacgggatc-3') and ptrA-R (5'-atggggtgacgatgagccgc-3') as primers, the obtained size is about The 2.0kb screenable marker pyridinethiamine resistance gene ptrA fragment was recovered and purified by a PCR product recovery kit.
将曲霉菌株HZ01(保藏于中国微生物菌种保藏管理委员会普通微生物中心(CGMCC),保藏编号为CGMCC NO.12970,保藏中心地址为北京市朝阳区北辰西路1号院3号)。接种于PDA固体平板(BD,DifcoTM Potato Dextrose Agar,213400)上,30℃培养7天,获得孢子。将HZ01菌株的孢子接种至50mL液体培养基IPM(60g L-1葡萄糖,2g L-1NH4NO3,20mg L-1(NH4)2HPO4,20mg L-1FeSO4,0.4g L-1MgSO4,4.4mg L-1ZnSO4,0.5g/L玉米浆粉(Sigma,C8160-500G),pH 3.5)中,使孢子浓度约为107个/mL,在200rmp、32℃培养12-18h。用无菌单层500目尼龙布过滤收集长出的菌丝,并用灭菌的0.6M MgSO4溶液冲洗三次,压干后置于无菌的50ml三角瓶中;称取1g菌丝,加入10ml酶解液,在30℃、60rpm处理1-3h。酶解液成分为:0.8%(质量体积比)纤维素酶(Sigma,Catalog No.:C1184)、0.8%(质量体积比)裂解酶(Sigma,Catalog NO.:L1412)、0.4%(质量体积比)蜗牛酶(上海生工,Catalog No.:SB0870)、0.6M MgSO4,经由0.22μm的无菌过滤器过滤除菌。将上述酶解后的混合液先用8层擦镜纸过滤,收集滤液。4℃离心收集原生质体,用预冷1.0M山梨醇溶液洗涤一次,再用预冷的STC(STC为1.0M山梨醇,50mM Tris·HCl-pH 8.0,50mM CaCl2)洗涤一次,最后把原生质体重悬于预冷的STC中,并用STC将原生质体浓度调整为2×108个/mL,得到原生质体悬液。The Aspergillus strain HZ01 (preserved in the General Microbiology Center of the China Microbial Culture Collection Management Committee (CGMCC), the preservation number is CGMCC No. 12970, and the address of the preservation center is No. 3, No. 1, Beichen West Road, Chaoyang District, Beijing). It was inoculated on a PDA solid plate (BD, Difco ™ Potato Dextrose Agar, 213400) and cultured at 30°C for 7 days to obtain spores. Spores of HZ01 strain were inoculated into 50 mL liquid medium IPM (60 g L -1 glucose, 2 g L -1 NH 4 NO 3 , 20 mg L -1 (NH 4 ) 2 HPO 4 , 20 mg L -1 FeSO 4 , 0.4 g L -1 MgSO 4 , 4.4 mg L -1 ZnSO 4 , 0.5 g/L corn steep liquor (Sigma, C8160-500G), pH 3.5), the spore concentration was about 10 7 /mL, and cultured at 200 rmp and 32°C 12-18h. Use sterile single-layer 500-mesh nylon cloth to filter and collect the grown mycelium, rinse with sterilized 0.6M MgSO4 solution three times, press dry and place in a sterile 50ml conical flask; weigh 1g of mycelium, add 10ml The enzymatic hydrolyzate was treated at 30°C and 60rpm for 1-3h. The components of the enzymatic hydrolysis solution are: 0.8% (mass volume ratio) cellulase (Sigma, Catalog No.: C1184), 0.8% (mass volume ratio) lyase (Sigma, Catalog No.: L1412), 0.4% (mass volume ratio) than) helicase (Shanghai Shenggong, Catalog No.: SB0870), 0.6M MgSO 4 , and sterilized by filtration through a 0.22 μm sterile filter. The mixed solution after the enzymolysis was first filtered with 8 layers of lens-wiping paper, and the filtrate was collected. Protoplasts were collected by centrifugation at 4°C, washed once with pre-cooled 1.0M sorbitol solution, and then once with pre-cooled STC (STC was 1.0M sorbitol, 50mM Tris·HCl-pH 8.0, 50mM CaCl 2 ), and finally the protoplasts were washed once. The body weight was resuspended in pre-cooled STC, and the protoplast concentration was adjusted to 2×10 8 /mL with STC to obtain a protoplast suspension.
向150μl上述原生质体悬液中同时加入DNA片段PgpdAt-pcest/Q140L-TtrpC(或PgpdAt-pcest/Q140L-TtrpC)(约3μg)和ptrA(约0.5μg),总体积为15μl,表达元件和ptrA的摩尔比约为1:5。再加入50μl冰浴的PSTC(PSTC为40%PEG4000,1.2M山梨醇,50mM Tris-HCl-pH8.0,50mM CaCl2),轻轻混匀,冰浴30min。加入1mL常温的PSTC,混匀后室温放置20min;然后与30mL上层琼脂(CD+1.2M山梨醇+4g/L琼脂糖,灭菌后48℃保温)混合后倾注于10块CD-SP再生筛选培养基平板(CD平板+1.2M山梨醇+0.1mg/L吡啶硫胺(Sigma,P0256))上,在30℃、黑暗条件下培养5-7天。The DNA fragments PgpdAt-pcest/Q140L-TtrpC (or PgpdAt-pcest/Q140L-TtrpC) (about 3 μg) and ptrA (about 0.5 μg) were simultaneously added to 150 μl of the above protoplast suspension, the total volume was 15 μl, the expression element and ptrA The molar ratio is about 1:5. Then add 50 μl of PSTC in ice bath (PSTC is 40% PEG4000, 1.2 M sorbitol, 50 mM Tris-HCl-pH8.0, 50 mM CaCl 2 ), mix gently, and ice bath for 30 min. Add 1 mL of PSTC at room temperature, mix well and place at room temperature for 20 min; then mix with 30 mL of upper agar (CD+1.2M sorbitol+4g/L agarose, sterilized at 48°C) and pour into 10 pieces of CD-SP for regeneration screening Culture medium plates (CD plates + 1.2M sorbitol + 0.1 mg/L pyrithione (Sigma, P0256)), and cultured at 30°C under dark conditions for 5-7 days.
从转化筛选平板上挑取具有吡啶硫胺抗性转化子转接至筛选平板CD-P上(CD平板+0.1mg/L吡啶硫胺),在32℃培养5天进行传代纯化,连续传代4次。选取稳定传代的4个转化子(2#、3#、4#、5#)进行单孢分离纯化,选择得到的单菌落孢子接种于IPM液体培养基中,30℃,200rpm,培养48小时,收集菌丝提取基因组。用引物PgpdAt-F630/TtrpC-R2进行PCR验证,能扩增出大小约为2.6kb的条带(PcEST/Q140L或野生型PcEST表达元件)者为阳性。由图5可知1#、2#、7#、8#、9#、10#、11#、13#转化子为阳性,基因组上整合有PcEST/Q140L表达元件PgpdAt-pcest/Q140L-TtrpC,将这8株HZ-PcEST/Q140L工程菌株分别记为Q140L-1、Q140L-2、Q140L-7、Q140L-8、Q140L-9、Q140L-10、Q140L-11、Q140L-13。由图6可知1#、4#、5#转化子为整合有PcEST表达元件PgpdAt-pcest-TtrpC的阳性转化子,分别记为HZ-PcEST-1、HZ-PcEST-4、HZ-PcEST-5。The transformants with pyrithione resistance were picked from the transformation screening plate and transferred to the screening plate CD-P (CD plate + 0.1 mg/L pyrithione), cultured at 32°C for 5 days for passage purification, and serially passaged for 4 Second-rate. 4 transformants (2#, 3#, 4#, 5#) of stable passage were selected for single spore separation and purification, and the obtained single colony spores were inoculated in IPM liquid medium, and cultivated for 48 hours at 30° C. and 200 rpm. Collect the hyphae to extract the genome. PCR was performed with primers PgpdAt-F630/TtrpC-R2 to verify that a band with a size of about 2.6kb (PcEST/Q140L or wild-type PcEST expression element) could be amplified as positive. It can be seen from Figure 5 that 1#, 2#, 7#, 8#, 9#, 10#, 11#, 13# transformants are positive, and the PcEST/Q140L expression element PgpdAt-pcest/Q140L-TtrpC is integrated on the genome. The eight HZ-PcEST/Q140L engineering strains were recorded as Q140L-1, Q140L-2, Q140L-7, Q140L-8, Q140L-9, Q140L-10, Q140L-11, and Q140L-13, respectively. It can be seen from Figure 6 that the
实施例5:产莫纳可林J的曲霉菌株的发酵验证Example 5: Fermentation verification of Aspergillus strains producing monacolin J
将需要进行发酵培养的曲霉菌株接种于PDA固体平板,30℃培养7天获得孢子,包括:8株过表达PcEST/Q140L突变体的工程菌株Q140L-1、Q140L-2、Q140L-7、Q140L-8、Q140L-9、Q140L-10、Q140L-11、Q140L-13,3株过表达野生型PcEST的工程菌株HZ-PcEST-1、HZ-PcEST-4、HZ-PcEST-5,和出发菌株HZ01。将孢子接种于35ml洛伐他汀发酵种子培养基(250mL三角瓶),28℃、220rpm震荡培养48小时,对照菌株HZ01菌株接种4瓶。将3.5mL种子液接种于30mL洛伐他汀发酵培养基(250mL三角瓶),28℃,220rpm震荡培养8天。取0.8mL发酵液(用剪头的枪头)加入至15mL离心管中,加入0.8mL的0.2M NaOH溶液,再加入8mL无水甲醇,置于混匀仪上翻转震荡4小时。用0.22μm有机相滤器过滤处理样品,送HPLC分析。HPLC分析方法为:液相色谱柱为Agilent ZORBAX SB-C18液相色谱柱883975-902(4.6×150mm,5μm),流动相为乙腈/0.1%H3PO4=0.7/0.3,流速为0.5ml/min,紫外检测器(237nm),25℃。结果如图7、8所示,在出发菌株HZ01菌株中产物主要是洛伐他汀,莫纳可林J含量很少。过表达野生型PcEST的工程菌株中主要产物是莫纳可林J,洛伐他汀残留很少,约5%-8%。过表达PcEST/Q140L突变体的曲霉工程菌株中,主要产物中含有大量的莫纳可林J,而洛伐他汀在部分菌株中检测不到,在部分菌株中含量极少,低于0.5%,后续不再需要进行分离纯化,进一步简化了辛伐他汀生产工艺,降低生产成本。这说明过表达酶性能提高了的PcEST突变体,可以提高洛伐他汀的胞内水解效率,从而提高洛伐他汀水解率,降低洛伐他汀残留,获得性状更优的产莫纳可林J曲霉工程菌株。The Aspergillus strains that need to be fermented were inoculated on a PDA solid plate, and cultured at 30°C for 7 days to obtain spores, including: 8 engineering strains Q140L-1, Q140L-2, Q140L-7, Q140L-overexpressing PcEST/
序列表 sequence listing
<110> 中国科学院青岛生物能源与过程研究所<110> Qingdao Institute of Bioenergy and Processes, Chinese Academy of Sciences
浙江海正药业股份有限公司 Zhejiang Hisun Pharmaceutical Co., Ltd.
<120> 一种2-甲基丁酸侧链水解酶及其表达菌株和应用<120> A kind of 2-methylbutyric acid side chain hydrolase and its expression strain and application
<130> DP1F171503ZX<130> DP1F171503ZX
<160> 4<160> 4
<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0
<210> 1<210> 1
<211> 399<211> 399
<212> PRT<212> PRT
<213> 产黄青霉(Penicillium chrysogenum)<213> Penicillium chrysogenum
<400> 1<400> 1
Met Asp Thr Thr Phe Gln Ala Ala Ile Asp Thr Gly Lys Ile Asn GlyMet Asp Thr Thr Phe Gln Ala Ala Ile Asp Thr Gly Lys Ile Asn Gly
1 5 10 151 5 10 15
Ala Val Val Cys Ala Thr Asp Ala Gln Gly His Phe Val Tyr Asn LysAla Val Val Cys Ala Thr Asp Ala Gln Gly His Phe Val Tyr Asn Lys
20 25 30 20 25 30
Ala Thr Gly Glu Arg Thr Leu Leu Ser Gly Glu Lys Gln Pro Gln GlnAla Thr Gly Glu Arg Thr Leu Leu Ser Gly Glu Lys Gln Pro Gln Gln
35 40 45 35 40 45
Leu Asp Asp Val Leu Tyr Leu Ala Ser Ala Thr Lys Leu Ile Thr ThrLeu Asp Asp Val Leu Tyr Leu Ala Ser Ala Thr Lys Leu Ile Thr Thr
50 55 60 50 55 60
Ile Ala Ala Leu Gln Cys Val Glu Asp Gly Leu Leu Ser Leu Asp GlyIle Ala Ala Leu Gln Cys Val Glu Asp Gly Leu Leu Ser Leu Asp Gly
65 70 75 8065 70 75 80
Asp Leu Ser Ser Ile Ala Pro Glu Leu Ala Ala Lys Tyr Val Leu ThrAsp Leu Ser Ser Ile Ala Pro Glu Leu Ala Ala Lys Tyr Val Leu Thr
85 90 95 85 90 95
Gly Phe Thr Asp Asp Glu Ser Pro Leu Asp Asp Pro Pro Ala Arg ProGly Phe Thr Asp Asp Glu Ser Pro Leu Asp Asp Pro Pro Ala Arg Pro
100 105 110 100 105 110
Ile Thr Leu Lys Met Leu Leu Thr His Ser Ser Gly Thr Ser Tyr HisIle Thr Leu Lys Met Leu Leu Thr His Ser Ser Gly Thr Ser Tyr His
115 120 125 115 120 125
Phe Leu Asp Pro Ser Ile Ala Lys Trp Arg Ala Gln Tyr Ala Asn ProPhe Leu Asp Pro Ser Ile Ala Lys Trp Arg Ala Gln Tyr Ala Asn Pro
130 135 140 130 135 140
Glu Asn Glu Lys Pro Arg Leu Val Glu Glu Met Phe Thr Tyr Pro LeuGlu Asn Glu Lys Pro Arg Leu Val Glu Glu Met Phe Thr Tyr Pro Leu
145 150 155 160145 150 155 160
Ser Phe Gln Pro Gly Thr Gly Trp Met Tyr Gly Pro Gly Leu Asp TrpSer Phe Gln Pro Gly Thr Gly Trp Met Tyr Gly Pro Gly Leu Asp Trp
165 170 175 165 170 175
Ala Gly Arg Val Val Glu Arg Val Thr Gly Gly Thr Leu Met Glu PheAla Gly Arg Val Val Glu Arg Val Thr Gly Gly Thr Leu Met Glu Phe
180 185 190 180 185 190
Met Gln Lys Arg Ile Phe Asp Pro Leu Gly Ile Thr Asp Ser Gln PheMet Gln Lys Arg Ile Phe Asp Pro Leu Gly Ile Thr Asp Ser Gln Phe
195 200 205 195 200 205
Tyr Pro Val Thr Arg Glu Asp Leu Arg Ala Arg Leu Val Asp Leu AsnTyr Pro Val Thr Arg Glu Asp Leu Arg Ala Arg Leu Val Asp Leu Asn
210 215 220 210 215 220
Pro Ser Asp Pro Gly Ala Leu Gly Ser Ala Val Ile Gly Gly Gly GlyPro Ser Asp Pro Gly Ala Leu Gly Ser Ala Val Ile Gly Gly Gly Gly
225 230 235 240225 230 235 240
Glu Met Asn Leu Arg Gly Arg Gly Ala Phe Gly Gly His Gly Leu PheGlu Met Asn Leu Arg Gly Arg Gly Ala Phe Gly Gly His Gly Leu Phe
245 250 255 245 250 255
Leu Thr Gly Leu Asp Phe Val Lys Ile Leu Arg Ser Leu Leu Ala AsnLeu Thr Gly Leu Asp Phe Val Lys Ile Leu Arg Ser Leu Leu Ala Asn
260 265 270 260 265 270
Asp Gly Met Leu Leu Lys Pro Ala Ala Val Asp Asn Met Phe Gln GlnAsp Gly Met Leu Leu Lys Pro Ala Ala Val Asp Asn Met Phe Gln Gln
275 280 285 275 280 285
His Leu Gly Pro Glu Ala Ala Ala Ser His Arg Ala Ala Leu Ala SerHis Leu Gly Pro Glu Ala Ala Ala Ser His Arg Ala Ala Leu Ala Ser
290 295 300 290 295 300
Pro Leu Gly Pro Phe Phe Arg Val Gly Thr Asp Pro Glu Thr Lys ValPro Leu Gly Pro Phe Phe Arg Val Gly Thr Asp Pro Glu Thr Lys Val
305 310 315 320305 310 315 320
Gly Tyr Gly Leu Gly Gly Leu Leu Thr Leu Glu Asp Val Asp Gly TrpGly Tyr Gly Leu Gly Gly Leu Leu Thr Leu Glu Asp Val Asp Gly Trp
325 330 335 325 330 335
Tyr Gly Glu Arg Thr Leu Thr Trp Gly Gly Gly Leu Thr Leu Thr TrpTyr Gly Glu Arg Thr Leu Thr Trp Gly Gly Gly Leu Thr Leu Thr Trp
340 345 350 340 345 350
Phe Ile Asp Arg Lys Asn Asn Leu Cys Gly Val Gly Ala Ile Gln AlaPhe Ile Asp Arg Lys Asn Asn Leu Cys Gly Val Gly Ala Ile Gln Ala
355 360 365 355 360 365
Val Leu Pro Val Asp Gly Asp Leu Met Ala Asp Leu Lys Gln Thr PheVal Leu Pro Val Asp Gly Asp Leu Met Ala Asp Leu Lys Gln Thr Phe
370 375 380 370 375 380
Arg His Asp Ile Tyr Arg Lys Tyr Ser Ala Trp Lys Gly Gln GlnArg His Asp Ile Tyr Arg Lys Tyr Ser Ala Trp Lys Gly Gln Gln
385 390 395385 390 395
<210> 2<210> 2
<211> 399<211> 399
<212> PRT<212> PRT
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 2<400> 2
Met Asp Thr Thr Phe Gln Ala Ala Ile Asp Thr Gly Lys Ile Asn GlyMet Asp Thr Thr Phe Gln Ala Ala Ile Asp Thr Gly Lys Ile Asn Gly
1 5 10 151 5 10 15
Ala Val Val Cys Ala Thr Asp Ala Gln Gly His Phe Val Tyr Asn LysAla Val Val Cys Ala Thr Asp Ala Gln Gly His Phe Val Tyr Asn Lys
20 25 30 20 25 30
Ala Thr Gly Glu Arg Thr Leu Leu Ser Gly Glu Lys Gln Pro Gln GlnAla Thr Gly Glu Arg Thr Leu Leu Ser Gly Glu Lys Gln Pro Gln Gln
35 40 45 35 40 45
Leu Asp Asp Val Leu Tyr Leu Ala Ser Ala Thr Lys Leu Ile Thr ThrLeu Asp Asp Val Leu Tyr Leu Ala Ser Ala Thr Lys Leu Ile Thr Thr
50 55 60 50 55 60
Ile Ala Ala Leu Gln Cys Val Glu Asp Gly Leu Leu Ser Leu Asp GlyIle Ala Ala Leu Gln Cys Val Glu Asp Gly Leu Leu Ser Leu Asp Gly
65 70 75 8065 70 75 80
Asp Leu Ser Ser Ile Ala Pro Glu Leu Ala Ala Lys Tyr Val Leu ThrAsp Leu Ser Ser Ile Ala Pro Glu Leu Ala Ala Lys Tyr Val Leu Thr
85 90 95 85 90 95
Gly Phe Thr Asp Asp Glu Ser Pro Leu Asp Asp Pro Pro Ala Arg ProGly Phe Thr Asp Asp Glu Ser Pro Leu Asp Asp Pro Pro Ala Arg Pro
100 105 110 100 105 110
Ile Thr Leu Lys Met Leu Leu Thr His Ser Ser Gly Thr Ser Tyr HisIle Thr Leu Lys Met Leu Leu Thr His Ser Ser Gly Thr Ser Tyr His
115 120 125 115 120 125
Phe Leu Asp Pro Ser Ile Ala Lys Trp Arg Ala Leu Tyr Ala Asn ProPhe Leu Asp Pro Ser Ile Ala Lys Trp Arg Ala Leu Tyr Ala Asn Pro
130 135 140 130 135 140
Glu Asn Glu Lys Pro Arg Leu Val Glu Glu Met Phe Thr Tyr Pro LeuGlu Asn Glu Lys Pro Arg Leu Val Glu Glu Met Phe Thr Tyr Pro Leu
145 150 155 160145 150 155 160
Ser Phe Gln Pro Gly Thr Gly Trp Met Tyr Gly Pro Gly Leu Asp TrpSer Phe Gln Pro Gly Thr Gly Trp Met Tyr Gly Pro Gly Leu Asp Trp
165 170 175 165 170 175
Ala Gly Arg Val Val Glu Arg Val Thr Gly Gly Thr Leu Met Glu PheAla Gly Arg Val Val Glu Arg Val Thr Gly Gly Thr Leu Met Glu Phe
180 185 190 180 185 190
Met Gln Lys Arg Ile Phe Asp Pro Leu Gly Ile Thr Asp Ser Gln PheMet Gln Lys Arg Ile Phe Asp Pro Leu Gly Ile Thr Asp Ser Gln Phe
195 200 205 195 200 205
Tyr Pro Val Thr Arg Glu Asp Leu Arg Ala Arg Leu Val Asp Leu AsnTyr Pro Val Thr Arg Glu Asp Leu Arg Ala Arg Leu Val Asp Leu Asn
210 215 220 210 215 220
Pro Ser Asp Pro Gly Ala Leu Gly Ser Ala Val Ile Gly Gly Gly GlyPro Ser Asp Pro Gly Ala Leu Gly Ser Ala Val Ile Gly Gly Gly Gly
225 230 235 240225 230 235 240
Glu Met Asn Leu Arg Gly Arg Gly Ala Phe Gly Gly His Gly Leu PheGlu Met Asn Leu Arg Gly Arg Gly Ala Phe Gly Gly His Gly Leu Phe
245 250 255 245 250 255
Leu Thr Gly Leu Asp Phe Val Lys Ile Leu Arg Ser Leu Leu Ala AsnLeu Thr Gly Leu Asp Phe Val Lys Ile Leu Arg Ser Leu Leu Ala Asn
260 265 270 260 265 270
Asp Gly Met Leu Leu Lys Pro Ala Ala Val Asp Asn Met Phe Gln GlnAsp Gly Met Leu Leu Lys Pro Ala Ala Val Asp Asn Met Phe Gln Gln
275 280 285 275 280 285
His Leu Gly Pro Glu Ala Ala Ala Ser His Arg Ala Ala Leu Ala SerHis Leu Gly Pro Glu Ala Ala Ala Ser His Arg Ala Ala Leu Ala Ser
290 295 300 290 295 300
Pro Leu Gly Pro Phe Phe Arg Val Gly Thr Asp Pro Glu Thr Lys ValPro Leu Gly Pro Phe Phe Arg Val Gly Thr Asp Pro Glu Thr Lys Val
305 310 315 320305 310 315 320
Gly Tyr Gly Leu Gly Gly Leu Leu Thr Leu Glu Asp Val Asp Gly TrpGly Tyr Gly Leu Gly Gly Leu Leu Thr Leu Glu Asp Val Asp Gly Trp
325 330 335 325 330 335
Tyr Gly Glu Arg Thr Leu Thr Trp Gly Gly Gly Leu Thr Leu Thr TrpTyr Gly Glu Arg Thr Leu Thr Trp Gly Gly Gly Leu Thr Leu Thr Trp
340 345 350 340 345 350
Phe Ile Asp Arg Lys Asn Asn Leu Cys Gly Val Gly Ala Ile Gln AlaPhe Ile Asp Arg Lys Asn Asn Leu Cys Gly Val Gly Ala Ile Gln Ala
355 360 365 355 360 365
Val Leu Pro Val Asp Gly Asp Leu Met Ala Asp Leu Lys Gln Thr PheVal Leu Pro Val Asp Gly Asp Leu Met Ala Asp Leu Lys Gln Thr Phe
370 375 380 370 375 380
Arg His Asp Ile Tyr Arg Lys Tyr Ser Ala Trp Lys Gly Gln GlnArg His Asp Ile Tyr Arg Lys Tyr Ser Ala Trp Lys Gly Gln Gln
385 390 395385 390 395
<210> 3<210> 3
<211> 1200<211> 1200
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 3<400> 3
atggatacca cctttcaggc ggcgattgat accggcaaaa ttaacggcgc agttgtttgc 60atggatacca cctttcaggc ggcgattgat accggcaaaa ttaacggcgc agttgtttgc 60
gcaaccgacg cacagggcca ttttgtttat aacaaagcaa ccggcgaacg taccctgctg 120gcaaccgacg cacagggcca ttttgtttat aacaaagcaa ccggcgaacg taccctgctg 120
tctggcgaaa aacaaccgca acagctggat gatgttctgt atctggcaag cgcgaccaaa 180tctggcgaaa aacaaccgca acagctggat gatgttctgt atctggcaag cgcgaccaaa 180
ctgattacca ccattgctgc tctgcaatgc gttgaagacg gtctgctgag tctggacggc 240ctgattacca ccattgctgc tctgcaatgc gttgaagacg gtctgctgag tctggacggc 240
gatctgagta gtattgcacc ggaactggca gcgaaatacg ttctgaccgg ttttaccgac 300gatctgagta gtattgcacc ggaactggca gcgaaatacg ttctgaccgg ttttaccgac 300
gacgaaagtc cgctggacga tccgccggca cgtccgatta ccctgaaaat gctgctgacc 360gacgaaagtc cgctggacga tccgccggca cgtccgatta ccctgaaaat gctgctgacc 360
catagcagcg gtaccagcta tcatttcctg gatccgtcta tcgcaaaatg gcgcgcacta 420catagcagcg gtaccagcta tcatttcctg gatccgtcta tcgcaaaatg gcgcgcacta 420
tacgcgaatc cggaaaacga aaaaccgcgt ctggtcgaag agatgttcac ctatccgctg 480tacgcgaatc cggaaaacga aaaaccgcgt ctggtcgaag agatgttcac ctatccgctg 480
agttttcaac cgggtaccgg ctggatgtac ggtccgggtc tggattgggc aggtcgcgtt 540agttttcaac cgggtaccgg ctggatgtac ggtccgggtc tggattgggc aggtcgcgtt 540
gttgaacgtg ttacgggcgg taccctgatg gaattcatgc agaaacgcat cttcgatccg 600gttgaacgtg ttacgggcgg taccctgatg gaattcatgc agaaacgcat cttcgatccg 600
ctgggtatca ccgatagcca gttttatccg gttacccgcg aagatctgcg cgcacgtctg 660ctgggtatca ccgatagcca gttttatccg gttacccgcg aagatctgcg cgcacgtctg 660
gttgatctga atccgtctga tccgggcgca ctgggttctg cagttattgg cggcggcggt 720gttgatctga atccgtctga tccgggcgca ctgggttctg cagttattgg cggcggcggt 720
gaaatgaatc tgcgcggtcg cggcgcattt ggcggtcacg gtctgtttct gaccggtctg 780gaaatgaatc tgcgcggtcg cggcgcattt ggcggtcacg gtctgtttct gaccggtctg 780
gatttcgtca aaatcctgcg tagcctgctg gctaacgacg gtatgctgct gaaaccggct 840gatttcgtca aaatcctgcg tagcctgctg gctaacgacg gtatgctgct gaaaccggct 840
gctgtcgata acatgttcca gcagcatctg ggtccggaag cagcagcaag tcatcgcgca 900gctgtcgata acatgttcca gcagcatctg ggtccggaag cagcagcaag tcatcgcgca 900
gcactggcaa gtccgctggg tccgtttttc cgcgttggta ccgatccgga aaccaaagtt 960gcactggcaa gtccgctggg tccgtttttc cgcgttggta ccgatccgga aaccaaagtt 960
ggttacggtc tgggcggtct gctgaccctg gaagacgttg acggttggta cggcgaacgt 1020ggttacggtc tgggcggtct gctgaccctg gaagacgttg acggttggta cggcgaacgt 1020
accctgacct ggggcggtgg tctgaccctg acctggttta tcgaccgcaa aaacaacctg 1080accctgacct ggggcggtgg tctgaccctg acctggttta tcgaccgcaa aaacaacctg 1080
tgtggtgttg gcgcaattca agcagttctg ccggttgacg gcgatctgat ggcagatctg 1140tgtggtgttg gcgcaattca agcagttctg ccggttgacg gcgatctgat ggcagatctg 1140
aaacagacct tccgccacga tatctaccgc aaatacagcg cctggaaagg tcagcagtga 1200aaacagacct tccgccacga tatctaccgc aaatacagcg cctggaaagg tcagcagtga 1200
<210> 4<210> 4
<211> 1200<211> 1200
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 4<400> 4
atggatacca cctttcaggc ggcgattgat accggcaaaa ttaacggcgc agttgtttgc 60atggatacca cctttcaggc ggcgattgat accggcaaaa ttaacggcgc agttgtttgc 60
gcaaccgacg cacagggcca ttttgtttat aacaaagcaa ccggcgaacg taccctgctg 120gcaaccgacg cacagggcca ttttgtttat aacaaagcaa ccggcgaacg taccctgctg 120
tctggcgaaa aacaaccgca acagctggat gatgttctgt atctggcaag cgcgaccaaa 180tctggcgaaa aacaaccgca acagctggat gatgttctgt atctggcaag cgcgaccaaa 180
ctgattacca ccattgctgc tctgcaatgc gttgaagacg gtctgctgag tctggacggc 240ctgattacca ccattgctgc tctgcaatgc gttgaagacg gtctgctgag tctggacggc 240
gatctgagta gtattgcacc ggaactggca gcgaaatacg ttctgaccgg ttttaccgac 300gatctgagta gtattgcacc ggaactggca gcgaaatacg ttctgaccgg ttttaccgac 300
gacgaaagtc cgctggacga tccgccggca cgtccgatta ccctgaaaat gctgctgacc 360gacgaaagtc cgctggacga tccgccggca cgtccgatta ccctgaaaat gctgctgacc 360
catagcagcg gtaccagcta tcatttcctg gatccgtcta tcgcaaaatg gcgcgcacaa 420catagcagcg gtaccagcta tcatttcctg gatccgtcta tcgcaaaatg gcgcgcacaa 420
tacgcgaatc cggaaaacga aaaaccgcgt ctggtcgaag agatgttcac ctatccgctg 480tacgcgaatc cggaaaacga aaaaccgcgt ctggtcgaag agatgttcac ctatccgctg 480
agttttcaac cgggtaccgg ctggatgtac ggtccgggtc tggattgggc aggtcgcgtt 540agttttcaac cgggtaccgg ctggatgtac ggtccgggtc tggattgggc aggtcgcgtt 540
gttgaacgtg ttacgggcgg taccctgatg gaattcatgc agaaacgcat cttcgatccg 600gttgaacgtg ttacgggcgg taccctgatg gaattcatgc agaaacgcat cttcgatccg 600
ctgggtatca ccgatagcca gttttatccg gttacccgcg aagatctgcg cgcacgtctg 660ctgggtatca ccgatagcca gttttatccg gttacccgcg aagatctgcg cgcacgtctg 660
gttgatctga atccgtctga tccgggcgca ctgggttctg cagttattgg cggcggcggt 720gttgatctga atccgtctga tccgggcgca ctgggttctg cagttattgg cggcggcggt 720
gaaatgaatc tgcgcggtcg cggcgcattt ggcggtcacg gtctgtttct gaccggtctg 780gaaatgaatc tgcgcggtcg cggcgcattt ggcggtcacg gtctgtttct gaccggtctg 780
gatttcgtca aaatcctgcg tagcctgctg gctaacgacg gtatgctgct gaaaccggct 840gatttcgtca aaatcctgcg tagcctgctg gctaacgacg gtatgctgct gaaaccggct 840
gctgtcgata acatgttcca gcagcatctg ggtccggaag cagcagcaag tcatcgcgca 900gctgtcgata acatgttcca gcagcatctg ggtccggaag cagcagcaag tcatcgcgca 900
gcactggcaa gtccgctggg tccgtttttc cgcgttggta ccgatccgga aaccaaagtt 960gcactggcaa gtccgctggg tccgtttttc cgcgttggta ccgatccgga aaccaaagtt 960
ggttacggtc tgggcggtct gctgaccctg gaagacgttg acggttggta cggcgaacgt 1020ggttacggtc tgggcggtct gctgaccctg gaagacgttg acggttggta cggcgaacgt 1020
accctgacct ggggcggtgg tctgaccctg acctggttta tcgaccgcaa aaacaacctg 1080accctgacct ggggcggtgg tctgaccctg acctggttta tcgaccgcaa aaacaacctg 1080
tgtggtgttg gcgcaattca agcagttctg ccggttgacg gcgatctgat ggcagatctg 1140tgtggtgttg gcgcaattca agcagttctg ccggttgacg gcgatctgat ggcagatctg 1140
aaacagacct tccgccacga tatctaccgc aaatacagcg cctggaaagg tcagcagtga 1200aaacagacct tccgccacga tatctaccgc aaatacagcg cctggaaagg tcagcagtga 1200
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