CN108486024A - The method of sensor-based system detection organophosphorus pesticide based on flora - Google Patents
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Abstract
Description
技术领域technical field
本发明涉及农药检测技术领域,具体涉及一种基于菌群的传感系统检测有机磷农药的方法。The invention relates to the technical field of pesticide detection, in particular to a method for detecting organophosphorus pesticides with a bacterial flora-based sensing system.
背景技术Background technique
有机磷农药(OPs)广泛用于昆虫防治,约占全球农药使用量的38%。作为神经系统乙酰胆碱酯酶的有效抑制剂,它们还可以引起人和动物的急性神经毒性中毒。因此,尽管OPs有大量的农业利益,OPs的大规模应用引起了公众对健康,环境和食品安全的严重关注。因此迫切需要开发用于快速,灵敏和便携式OPs检测的方法。已经开发了许多分析方法,如液相色谱或气相色谱和质谱,用于检测OPs。但是,它们花费往往很昂贵,需要大量的物流。近年来,生物传感器由于操作简单,响应速度快,性价比高而受到越来越多的关注。对于OPs,有机磷酸酯水解酶(OPH)是一种高效的OPs转化酶,已经被固定在电化学分析检测器的表面,为OPs化合物的检测提供了另一种方法。然而,这种类型的传感器在实际样品中经常受到其他可氧化物质(例如葡萄糖,蔗糖和苯酚)的干扰。Organophosphorus pesticides (OPs) are widely used in insect control, accounting for approximately 38% of global pesticide use. As potent inhibitors of acetylcholinesterase in the nervous system, they can also cause acute neurotoxic poisoning in humans and animals. Therefore, despite the substantial agricultural benefits of OPs, the large-scale application of OPs raises serious public concerns about health, environment, and food safety. Therefore, there is an urgent need to develop methods for rapid, sensitive and portable OPs detection. Many analytical methods, such as liquid chromatography or gas chromatography and mass spectrometry, have been developed for the detection of OPs. However, they are often expensive and require extensive logistics. In recent years, biosensors have attracted increasing attention due to their simple operation, fast response, and high cost performance. For OPs, organophosphate hydrolase (OPH), a highly efficient OPs-converting enzyme, has been immobilized on the surface of an electrochemical analytical detector, providing an alternative method for the detection of OPs compounds. However, this type of sensor is often interfered by other oxidizable species such as glucose, sucrose, and phenol in real samples.
解决现有方法局限性的一种有前景的方法是全细胞生物传感,它利用微生物的不同调控元件来检测环境信号。全细胞生物传感器通常由与其靶分析物结合的转录调节因子和将调节物-靶标相互作用转化为可测量的输出物的报告基因组成。对于OPs检测,Chong等人通过用二甲基苯酚调节蛋白(DmpR)检测和报道OPs水解产物中的一种对硝基苯酚(PNP)来构建新型全细胞大肠杆菌生物传感器。值得注意的是,由于DmpR不是对PNP敏感的天然调节因子,因此研究人员采用了一种系统的工程方法来优化DmpR,从而产生的检测灵敏度。然而,灵敏度仍然是个数量级,幅度低于电化学和色谱方法。另外,它花费很长的响应时间(超过6小时)。A promising approach to address the limitations of existing approaches is whole-cell biosensing, which exploits distinct regulatory elements of microorganisms to detect environmental signals. Whole-cell biosensors typically consist of a transcriptional regulator that binds its target analyte and a reporter gene that translates the regulator-target interaction into a measurable output. For OPs detection, Chong et al. constructed a novel whole-cell Escherichia coli biosensor by detecting and reporting a p-nitrophenol (PNP) in OPs hydrolyzate with dimethylphenol regulatory protein (DmpR). Notably, since DmpR is not a natural regulator of PNP sensitivity, the researchers employed a systematic engineering approach to optimize DmpR, resulting in detection sensitivity. However, the sensitivity is still orders of magnitude lower than electrochemical and chromatographic methods. Also, it takes a long time to respond (over 6 hours).
作为来自假单胞菌的PNP降解途径的一部分,菌株WBC-3,LysR型转录调节因子LTTR(表示为PnpR)已经显示响应于PNP激活三个操纵子(pnpA,pnpB和pnpCDEFG)。因此,有希望的解决方案是利用这种本地PNP响应调节器可以成为开发超灵敏的OPs生物传感器。除了OPH的催化效率之外,PNP传感也很大程度上取决于OPH的OPH的物理可接近性。研究表明OPs在OPH所在的细胞质中的扩散是PNP感应的一个限速步骤。事实上,当OPH锚定在外膜上时,其活性提高了七倍。与表面展示有关的一个问题是长时间的孵育需要适当的目标蛋白质易位,导致延迟和非线性信号积累。As part of the PNP degradation pathway from Pseudomonas, strain WBC-3, the LysR-type transcriptional regulator LTTR (denoted PnpR) has been shown to activate three operons (pnpA, pnpB and pnpCDEFG) in response to PNP. Therefore, a promising solution to utilize this native PNP response regulator can be a promising solution for the development of ultrasensitive OPs biosensors. In addition to the catalytic efficiency of OPHs, PNP sensing also largely depends on the physical accessibility of OPHs to OPHs. Studies have shown that the diffusion of OPs in the cytoplasm where OPH resides is a rate-limiting step in PNP induction. In fact, OPH's activity increased sevenfold when it was anchored to the outer membrane. One problem associated with surface display is that prolonged incubations require proper target protein translocation, leading to delays and non-linear signal accumulation.
最近,合成的微生物菌群已经成为细胞功能编程的有效途径。一系列人造生态系统已被成功地创造出来,大量生产化学物质和生物大分子以及产生确定的种群动态。与单一工程菌株相比,这些设计合理的生态系统具有几个明显的优势,包括通过生态系统内物种间的分工来增强细胞功能的性能,稳定性和可编程性。Recently, synthetic microbial consortia have emerged as an effective way to program cellular functions. A range of man-made ecosystems have been successfully created, producing large quantities of chemicals and biomacromolecules and generating defined population dynamics. These well-designed ecosystems have several distinct advantages over single engineered strains, including enhanced performance, stability, and programmability of cellular functions through the division of labor among species within the ecosystem.
发明内容Contents of the invention
本发明要解决的技术问题是,针对现有技术不足,提供一种基于菌群的传感系统检测有机磷农药的方法。The technical problem to be solved by the present invention is to provide a method for detecting organophosphorus pesticides with a bacterial flora-based sensing system for deficiencies in the prior art.
本发明的目的是通过以下技术方案实现的:The purpose of the present invention is achieved through the following technical solutions:
第一方面,本发明提供了一种基于菌群的传感系统,包括含OPH信号感应模块和含信号发生模块的基因工程菌群。In the first aspect, the present invention provides a bacterial flora-based sensing system, including a genetically engineered flora containing an OPH signal sensing module and a signal generating module.
优选地,所述含OPH信号感应模块的基因工程菌的构建方法包括以下步骤:将OPH与pVLT33载体进行连接,构建pPNCO33质粒,然后将pPNCO33质粒转化到基因工程菌中形成含OPH信号感应模块的基因工程菌。优选所述基因工程菌为大肠杆菌XL1-Blue。Preferably, the construction method of the genetically engineered bacterium containing the OPH signal sensing module comprises the following steps: connecting the OPH with the pVLT33 carrier, constructing the pPNCO33 plasmid, and then transforming the pPNCO33 plasmid into the genetically engineered bacterium to form a bacterium containing the OPH signal sensing module. Genetically engineered bacteria. Preferably, the genetically engineered bacterium is Escherichia coli XL1-Blue.
优选地,所述含信号发生模块的基因工程菌的构建包括以下步骤:Preferably, the construction of the genetically engineered bacteria containing the signal generation module comprises the following steps:
通过重叠延伸聚合酶链式反应将pnpR-PpnpC基因序列插入到pSV-β-galactosidase载体中,形成pSVRTCL质粒,在这个构建的质粒中引入pnpR基因表达受组成型启动子SV40调控,引入的pnpC启动子负责调控下游的lacZ基因表达;然后将pSVRTCL质粒转化到大肠杆菌中,形成含信号发生模块的基因工程菌。优选所述基因工程菌为大肠杆菌DH5α。The pnpR-PpnpC gene sequence was inserted into the pSV-β-galactosidase vector by overlapping extension polymerase chain reaction to form a pSVRTCL plasmid, and the expression of the pnpR gene introduced into the constructed plasmid was regulated by the constitutive promoter SV40, and the introduced pnpC was activated The pSVRTCL plasmid is responsible for regulating the expression of the downstream lacZ gene; then the pSVRTCL plasmid is transformed into Escherichia coli to form a genetically engineered bacterium containing a signal generation module. Preferably, the genetically engineered bacteria is Escherichia coli DH5α.
优选地,所述含OPH信号感应模块的基因工程菌和含信号发生模块的基因工程菌的相对比例为10:1~1:10。Preferably, the relative ratio of the genetically engineered bacteria containing the OPH signal sensing module to the genetically engineered bacteria containing the signal generating module is 10:1˜1:10.
优选地,所述含OPH信号感应模块的基因工程菌和含信号发生模块的基因工程菌的总密度相同。Preferably, the total densities of the genetically engineered bacteria containing the OPH signal sensing module and the genetically engineered bacteria containing the signal generating module are the same.
第二方面,本发明提供了一种基于前述的传感系统在检测有机磷农药中的应用。In a second aspect, the present invention provides an application of the aforementioned sensing system in the detection of organophosphorus pesticides.
优选地,所述有机磷农药包括乙基对氧磷、甲基对氧磷、乙基对硫磷、甲基对硫磷、对硝基苯基苯基硫代磷酸乙酯(EPN)和杀螟松。Preferably, the organophosphorus pesticides include ethyl paraoxon, methyl paraoxon, ethyl parathion, methyl parathion, ethyl p-nitrophenylphenylphosphorothioate (EPN) and borer pine.
第三方面,本发明提供了一种基于菌群的传感系统检测有机磷农药的方法,包括以下步骤:In a third aspect, the present invention provides a method for detecting organophosphorus pesticides with a flora-based sensing system, comprising the following steps:
将前述的传感系统悬浮在含有X-gal和有机磷的2YT液体培养基中,28℃下共温育,通过颜色强度测得有机磷的浓度。The aforementioned sensing system was suspended in 2YT liquid medium containing X-gal and organophosphate, and co-incubated at 28°C, and the concentration of organophosphate was measured by color intensity.
第四方面,本发明提供了一种基于前述的传感系统的检测有机磷农药用滤纸。In a fourth aspect, the present invention provides a filter paper for detecting organophosphorus pesticides based on the aforementioned sensing system.
第五方面,本发明提供了一种检测有机磷农药用滤纸的制备方法,包括以下步骤:将前述的含OPH信号感应模块的基因工程菌和含信号发生模块的基因工程菌悬浮在干燥保护剂溶液中,并在无菌条件下滴在滤纸条上,形成细胞区,然后将滤纸条真空冷冻干燥,即得。In a fifth aspect, the present invention provides a method for preparing filter paper for detecting organophosphorus pesticides, comprising the following steps: suspending the aforementioned genetically engineered bacteria containing the OPH signal sensing module and the genetically engineered bacteria containing the signal generating module in the drying protectant solution, and drop it on the filter paper strip under sterile conditions to form a cell area, and then vacuum freeze-dry the filter paper strip to obtain the obtained product.
第六方面,本发明提供了一种检测有机磷农药用滤纸的使用方法,包括以下步骤:将含有机磷的待测溶液溶于2YT液体培养基中,然后将滤纸的细胞区插入该培养基中,28℃孵育2小时后,将X-gal加入滤纸的细胞区,通过颜色强度测定有机磷的浓度。In a sixth aspect, the present invention provides a method for using filter paper for detecting organophosphorus pesticides, comprising the following steps: dissolving the solution to be tested containing organophosphate in 2YT liquid medium, and then inserting the cell region of the filter paper into the medium After incubation at 28°C for 2 hours, X-gal was added to the cell area of the filter paper, and the concentration of organophosphorus was determined by color intensity.
与现有技术相比,本发明具有如下的有益效果:Compared with the prior art, the present invention has the following beneficial effects:
1、本发明所述的基于菌群的传感系统可用于检测和响应OPs,且该系统在纳摩尔浓度下具有较低的检测限,敏感度高。最低检测限可达1×10-9M。1. The flora-based sensing system of the present invention can be used to detect and respond to OPs, and the system has a lower detection limit and high sensitivity at nanomolar concentrations. The lowest detection limit can reach 1×10 -9 M.
2、相比于转化和检测步骤通常难以改变的单一工程菌株,OPs感测的基于菌群的实施允许通过简单地改变相对种群丰度在转化和检测之间进行简单且有效的调节。2. Compared with a single engineered strain whose transformation and detection steps are usually difficult to change, the colony-based implementation of OPs sensing allows simple and efficient adjustment between transformation and detection by simply changing the relative population abundance.
3、该系统在液体和冻干状态下都能工作,具有广泛的适用性。3. The system can work in both liquid and freeze-dried states, and has wide applicability.
4、其对OPs的快速比色反应消除了对精密仪器的需求,这在低资源环境下提供了可行的分析测试。4. Its rapid colorimetric response to OPs eliminates the need for sophisticated instruments, which provides a feasible analytical test in low-resource settings.
5、尽管生物传感系统设计用于检测由OPs转换而来的PNP,但原则上它可用于检测任何其他来源的PNP(47)。因此,该系统可以作为独立子系统用于其他PNP-相关的领域。5. Although the biosensing system is designed to detect PNP converted from OPs, it can in principle be used to detect PNP from any other source (47). Therefore, the system can be used as an independent subsystem in other PNP-related fields.
附图说明Description of drawings
通过阅读参照以下附图对非限制性实施例所作的详细描述,本发明的其它特征、目的和优点将会变得更明显:Other characteristics, objects and advantages of the present invention will become more apparent by reading the detailed description of non-limiting embodiments made with reference to the following drawings:
图1:本发明用于OPs检测的基于菌群的生物传感系统示意图;Figure 1: Schematic diagram of the bacterial flora-based biosensing system used for OPs detection in the present invention;
图2:本发明实施例中pPNCO33质粒图谱和全细胞OPH活性结果;其中图2A为pPNCO33质粒图谱;图2B为全细胞OPH活性结果;Figure 2: The plasmid map of pPNCO33 and the results of whole-cell OPH activity in the examples of the present invention; wherein Figure 2A is the plasmid map of pPNCO33; Figure 2B is the result of OPH activity of whole cells;
图3:本发明实施例中pBBR1-tacpnpR质粒和pCMgfp-spClacZ质粒的图谱以及信号发生模块对PNP浓度的剂量相应;其中图3A为pBBR1-tacpnpR质粒和pCMgfp-spClacZ质粒的图谱;图3B为信号发生模块对PNP浓度的剂量相应;Figure 3: The maps of the pBBR1-tacpnpR plasmid and pCMgfp-spClacZ plasmid and the dose response of the signal generation module to the PNP concentration in the embodiment of the present invention; wherein Figure 3A is the map of the pBBR1-tacpnpR plasmid and the pCMgfp-spClacZ plasmid; Figure 3B is the signal The dose response of the generation module to the PNP concentration;
图4:本发明实施例中用乙基对氧磷测试基于菌群的生物传感系统结果;其中,图4A为两种含信号发生模块的大肠杆菌;图4B为存在不同乙基对氧磷浓度的培养悬浮液650nm处的吸光度;图4C为在不同浓度的乙基-对氧磷下两种不同体系的比色测试的图片;Fig. 4: In the embodiment of the present invention, ethyl paraoxon is used to test the results of the biosensing system based on flora; wherein, Fig. 4A is two kinds of Escherichia coli containing signal generation modules; Fig. 4B is the presence of different ethyl paraoxon The absorbance at 650nm of the culture suspension of the concentration; Figure 4C is the picture of the colorimetric test of two different systems under different concentrations of ethyl-paraoxon;
图5:本发明实施例中不同乙基对氧磷接种浓度时间函数对应的生物传感器样品的吸光度;Figure 5: The absorbance of biosensor samples corresponding to different ethyl paraoxon inoculation concentration time functions in the embodiment of the present invention;
图6:利用基于菌群的系统来检测不同的OPs的结果;其中图6A为待检测的OPs的结构;图6B为检测结果;Figure 6: The results of detecting different OPs using a system based on flora; wherein Figure 6A is the structure of the OPs to be detected; Figure 6B is the detection result;
图7:用基于菌群传感系统的纸质检测乙基对氧磷的结果;其中图7A为用数码相机获得的比色结果的图像;图7B为采用图7A中结果的颜色强度以乙基对氧磷浓度的函数作图;Figure 7: The result of detecting ethyl paraoxon with paper based on the flora sensing system; wherein Figure 7A is an image of the colorimetric result obtained with a digital camera; Figure 7B is the color intensity using the results in Figure 7A in B Plotting the function of base paraoxon concentration;
图8:使用实际样本对菌群传感系统进行比色测试结果;Figure 8: The colorimetric test results of the flora sensing system using actual samples;
图9:采用不同比例混合的基于菌群的传感系统的吸光度结果;Figure 9: Absorbance results of the colony-based sensing system using different ratio mixing;
图10:pSVRCL和pSVRTCL的质粒图谱;其中图10A为pSVRCL质粒;图10B为pSVRTCL质粒;Figure 10: Plasmid maps of pSVRCL and pSVRTCL; wherein Figure 10A is the pSVRCL plasmid; Figure 10B is the pSVRTCL plasmid;
图11:采用含有包含携带pSVRCL质粒的信号发生细胞的菌群传感系统对不同浓度乙基对氧磷的比色响应;Figure 11: Colorimetric response to different concentrations of ethyl paraoxon by using a colony sensing system containing signal-generating cells carrying pSVRCL plasmid;
图12:携带pSVRTCL和pBBR1-tacpnpR的大肠杆菌生长的时间过程;Figure 12: Time course of growth of E. coli carrying pSVRTCL and pBBR1-tacpnpR;
图13:使用化学发光实验监测β-半乳糖苷酶表达;其中图13A为β-半乳糖苷酶存在下的光生成机理图;图13B为基于化学发光测定的不同浓度OPs的样品中β-半乳糖苷酶表达的校准曲线。Figure 13: Monitoring of β-galactosidase expression using chemiluminescence experiments; where Figure 13A is a diagram of the light generation mechanism in the presence of β-galactosidase; Figure 13B is the β-galactosidase in samples with different concentrations of OPs based on chemiluminescence measurement Calibration curve for galactosidase expression.
具体实施方式Detailed ways
下面结合具体实施例对本发明进行详细说明。以下实施例将有助于本领域的技术人员进一步理解本发明,但不以任何形式限制本发明。应当指出的是,对本领域的普通技术人员来说,在不脱离本发明构思的前提下,还可以做出若干变化和改进。这些都属于本发明的保护范围。The present invention will be described in detail below in conjunction with specific embodiments. The following examples will help those skilled in the art to further understand the present invention, but do not limit the present invention in any form. It should be noted that those skilled in the art can make several changes and improvements without departing from the concept of the present invention. These all belong to the protection scope of the present invention.
实施例1Example 1
1、本实施例采用的菌株,培养基和试剂1. The bacterial strains, medium and reagents used in this embodiment
大肠杆菌XL1-Blue(Clontech公司,美国)和大肠杆菌DH5α(Invitrogen公司,美国)用于所有的克隆和蛋白表达步骤。细菌在2YT培养基(16g/L胰蛋白胨,10g/L酵母提取物和5g/L氯化钠)中培养。Escherichia coli XL1-Blue (Clontech, USA) and Escherichia coli DH5α (Invitrogen, USA) were used for all cloning and protein expression steps. Bacteria were cultured in 2YT medium (16 g/L tryptone, 10 g/L yeast extract and 5 g/L sodium chloride).
将对硝基苯酚(PNP)和Ops(如乙基对氧磷,甲基对氧磷,乙基对硫磷,甲基对硫磷,杀螟硫磷和EPN)溶于乙腈中以制备浓度为1×10-1M的原液。Dissolve p-nitrophenol (PNP) and Ops (such as ethyl paraoxon, methyl paraoxon, ethyl parathion, methyl parathion, fenitrothion and EPN) in acetonitrile to prepare concentrations It is 1×10 -1 M stock solution.
测试化学品购自Sigma-Aldrich公司。Whatman通用滤纸(中等速度,起绉,直径=9.0厘米),动物组织蛋白胨,牛肉膏,明胶,L-抗坏血酸钠,D-(+)-五氟化钠,L-谷氨酸单钠盐一水合物,氨苄西林,卡那霉素,四环素和无水N,N-二甲基甲酰胺(DMF)购自Promega(Madison,WI,USA)。HPLC级乙腈,氯化钠,氯化钾,氯化镁,磷酸钠一水合物和七水合磷酸二钠购自Fisher Scientific(Pittsburgh,PA,USA)。显色底物X-gal(5-溴-4-氯-3-吲哚基-D-吡喃半乳糖苷)购自Gold Biotechnology(St.Louis,MO,USA)。β-Glo分析试剂得自Promega(Madison,WI,USA)。Alpha 2-4冻干机购自Martin ChristGefriertrocknungsanlagenGmbH(Osterode,德国)。使用Q5高保真DNA聚合酶或Taq DNA聚合酶(New England Biolabs,Ipswich,MA,USA)进行聚合酶链式反应(PCR),并用QIAquick凝胶提取试剂盒(Qiagen,Valencia,CA,美国)。限制性酶和T4DNA连接酶购自New EnglandBiolabs(Ipswich,MA,USA),使用QIA prep Spin Miniprep试剂盒(Qiagen,Valencia,CA,USA)回收重组质粒。Test chemicals were purchased from Sigma-Aldrich Company. Whatman Universal filter paper (medium speed, creped, diameter = 9.0 cm), animal tissue peptone, beef extract, gelatin, L-sodium ascorbate, D-(+)-sodium pentafluoride, L-glutamic acid monosodium salt Hydrate, ampicillin, kanamycin, tetracycline and anhydrous N,N-dimethylformamide (DMF) were purchased from Promega (Madison, WI, USA). HPLC grade acetonitrile, sodium chloride, potassium chloride, magnesium chloride, sodium phosphate monohydrate and disodium phosphate heptahydrate were purchased from Fisher Scientific (Pittsburgh, PA, USA). The chromogenic substrate X-gal (5-bromo-4-chloro-3-indolyl-D-galactopyranoside) was purchased from Gold Biotechnology (St. Louis, MO, USA). β-Glo assay reagents were obtained from Promega (Madison, WI, USA). Alpha 2-4 lyophilizers were purchased from Martin Christ Gefriertrocknungsanlagen GmbH (Osterode, Germany). Polymerase chain reaction (PCR) was performed using Q5 high-fidelity DNA polymerase or Taq DNA polymerase (New England Biolabs, Ipswich, MA, USA) and QIAquick gel extraction kit (Qiagen, Valencia, CA, USA). Restriction enzymes and T4 DNA ligase were purchased from New England Biolabs (Ipswich, MA, USA), and recombinant plasmids were recovered using QIA prep Spin Miniprep Kit (Qiagen, Valencia, CA, USA).
2、基于菌群的传感系统的构建2. The construction of the bacterial colony-based sensing system
2.1含OPH信号感应模块的大肠杆菌的构建2.1 Construction of Escherichia coli containing OPH signal sensing module
OPH信号感应模块包含处于IPTG诱导型tac启动子控制下的inpnc-opd片段(编码的INPNC-OPH融合蛋白)。将其置于基于pVLT33的载体pPNCO33中(图2A)。opd部分用于编码将OP转换成PNP的水解酶。inpnc-opd片段的inpnc编码INP的截短版本,其中仅包含其N-和C-末端结构域,已被广泛用作表面锚定基序。这种融合设计允许OPH在细胞表面展示,以提高OP-PNP转换速率。因为活性OPH在细胞表面上的过度表达是高度宿主特异性的,并且在XL1-Blue菌株中表现出更高的OP降解速率,所以将pPNCO33质粒转化到大肠杆菌XL1-Blue中。The OPH signal-sensing module contains the inpnc-opd fragment (encoded INPNC-OPH fusion protein) under the control of the IPTG-inducible tac promoter. This was placed in the pVLT33-based vector pPNCO33 (Fig. 2A). The opd portion encodes a hydrolase that converts OP to PNP. The inpnc-opd fragment of the inpnc-encoded truncated version of INP, which contains only its N- and C-terminal domains, has been widely used as a surface anchoring motif. This fusion design allows OPH to be displayed on the cell surface to increase the OP-PNP turnover rate. Because the overexpression of active OPH on the cell surface is highly host-specific and exhibited a higher rate of OP degradation in the XL1-Blue strain, the pPNCO33 plasmid was transformed into E. coli XL1-Blue.
将编码INPNC-OPH有机磷水解酶片段从pINCOP质粒进行PCR扩增,克隆到EcoRI-HindIII消化的pVLT33(一种大肠杆菌-假单胞菌穿梭载体)中以产生pPNCO33。将pPNCO33质粒转化到大肠杆菌XL1-Blue中以形成OPH信号感应模块,即得含OPH信号感应模块的大肠杆菌。A fragment encoding the INPNC-OPH organophosphate hydrolase was PCR amplified from the pINCOP plasmid and cloned into EcoRI-HindIII digested pVLT33 (an E. coli-Pseudomonas shuttle vector) to generate pPNCO33. The pPNCO33 plasmid was transformed into Escherichia coli XL1-Blue to form the OPH signal sensing module, and E. coli containing the OPH signal sensing module was obtained.
将携带pPNCO33质粒的大肠杆菌在含有卡那霉素(50μg/mL)的2YT培养基中250rpm、37℃振荡培养。当大肠杆菌培养物的OD600达到0.6时,加入0.3mM IPTG,28℃诱导蛋白质表达24小时。The Escherichia coli carrying the pPNCO33 plasmid was cultured with shaking at 250 rpm and 37° C. in 2YT medium containing kanamycin (50 μg/mL). When the OD600 of the E. coli culture reached 0.6, 0.3 mM IPTG was added and protein expression was induced at 28°C for 24 hours.
2.2含信号发生模块的大肠杆菌2.2 Escherichia coli containing signal generation module
为了构建pCMgfp-spClacZ质粒,将mcs-gfp片段(其中mcs是多克隆位点)由pEX18Tc-cmgfp模板扩增并克隆到KpnI-SacI消化的pCM130中,得到pCMgfp质粒。将lacZ片段克隆到BamHI-HindIII消化的pCMgfp中以产生pCMgfp-lacZ质粒。将pnpC启动子(-94至+25区)克隆至经SphI-BamHI消化的pCMgfp-lacZ中以产生pCMgfp-spClacZ质粒(图3A所示),所述pCMgfp-spClacZ质粒中lacZ基因位于pnpC启动子下游。To construct the pCMgfp-spClacZ plasmid, the mcs-gfp fragment (where mcs is the multiple cloning site) was amplified from the pEX18Tc-cmgfp template and cloned into KpnI-SacI digested pCM130 to obtain the pCMgfp plasmid. The lacZ fragment was cloned into BamHI-HindIII digested pCMgfp to generate the pCMgfp-lacZ plasmid. The pnpC promoter (-94 to +25 region) was cloned into pCMgfp-lacZ digested with SphI-BamHI to generate the pCMgfp-spClacZ plasmid (shown in Figure 3A) in which the lacZ gene was located on the pnpC promoter downstream.
用KpnI和BamHI消化tac片段,用BamHI和SacI消化含His标签序列的pnpR片段,将这两个片段克隆到KpnI-SacI消化的pBBR1mcs-2中,得到pBBR1-tacpnpR质粒。The tac fragment was digested with KpnI and BamHI, the pnpR fragment containing the His tag sequence was digested with BamHI and SacI, and these two fragments were cloned into pBBR1mcs-2 digested with KpnI-SacI to obtain the pBBR1-tacpnpR plasmid.
将pCMgfp-spClacZ质粒和pBBR1-tacpnpR质粒共转化到单一的大肠杆菌DH5α细胞中以形成信号发生模块(即含信号发生模块的大肠杆菌1)。将转化的大肠杆菌DH5α在250rpm和37℃下在补充有卡那霉素(50μg/mL)和四环素(100μg/mL)的2YT培养基中振荡培养。一旦大肠杆菌培养物的OD600达到0.6,向其中加入0.5mM IPTG表达PnpR蛋白,与OPH模块感应有机磷农药产生的PNP结合,激发β-半乳糖苷酶的表达,催化信号指示分子X-gal分解产生蓝色信号。The pCMgfp-spClacZ plasmid and the pBBR1-tacpnpR plasmid were co-transformed into a single E. coli DH5α cell to form a signaling module (ie, E. coli 1 containing a signaling module). Transformed Escherichia coli DH5α was cultured with shaking in 2YT medium supplemented with kanamycin (50 μg/mL) and tetracycline (100 μg/mL) at 250 rpm and 37°C. Once the OD 600 of the E. coli culture reaches 0.6, add 0.5mM IPTG to it to express the PnpR protein, which combines with the PNP produced by the OPH module to sense organophosphorus pesticides, and stimulates the expression of β-galactosidase, and the catalytic signal indicates the molecule X-gal Decomposition produces a blue signal.
为了测试构建组件含信号发生模块的大肠杆菌1的功能,将带有pCMgfp-spClacZ和pBBR1-tacpnpR的信号发生大肠杆菌DH5α细胞在100-mL培养瓶中生长至OD600为1,然后将90μL培养物等分到96孔微量滴定板。加入不同浓度的PNP后,每孔加入10μL10mg/mL的X-gal溶液,培养板在28℃,220rpm的振荡培养。使用SpectraMax○R M5酶标仪每隔30分钟测量650nm处的吸光度,一共测量3.5小时。To test the function of the building block E. coli 1 containing the signal-generating module, the signal-generating E. coli DH5α cells harboring pCMgfp-spClacZ and pBBR1-tacpnpR were grown to an OD600 of 1 in 100-mL culture flasks, and then 90 μL of Aliquot into 96-well microtiter plates. After adding different concentrations of PNP, 10 μL of 10 mg/mL X-gal solution was added to each well, and the culture plate was incubated at 28° C. with shaking at 220 rpm. The absorbance at 650 nm was measured every 30 minutes using a SpectraMax○R M5 microplate reader for a total of 3.5 hours.
PNP结合相应pnpC启动子诱导下游b-半乳糖酶基因表达,分解X-gal产生蓝色。通过量化X-gal消耗后由报告蛋白β-半乳糖苷酶产生的蓝色来确定系统对PNP的响应,这可以通过测量650nm处的吸光度来实现。实际上,数据清楚地表明650nm处蓝色的吸光度与PNP浓度正相关(图3B)。PNP binds to the corresponding pnpC promoter to induce the expression of the downstream b-galactase gene, and decomposes X-gal to produce blue. The response of the system to PNP was determined by quantifying the blue color produced by the reporter protein β-galactosidase after X-gal depletion, which can be achieved by measuring the absorbance at 650 nm. Indeed, the data clearly show that the absorbance of the blue color at 650 nm is positively correlated with the PNP concentration (Fig. 3B).
分别从pBBR1-tacpnpR和pCMgfp-spClacZ质粒扩增野生型pnpR和PNP分解代谢操纵子pnpC的启动子,并用于构建产生信号的单个质粒(引物列表如表1所示)。扩增产物通过凝胶电泳分离并纯化。这两个基因pnpR和pnpC通过重叠延伸PCR(OEP)融合。pSV-β-半乳糖苷酶质粒载体(pSV-β-galactosidase载体)购自Promega(Madison,WI,USA)。pSV-β-半乳糖苷酶载体和融合的pnpR-pnpC用HindIII-BsaAI双重消化。将pSV-β-半乳糖苷酶和融合的pnpR-pnpC的消化产物混合在一起并在16℃下过夜连接以产生pSVRCL质粒(图10A)。在该质粒中,在组成型启动子SV40的控制下表达pnpR基因,并且在pnpC启动子的控制下表达lacZ基因。将pSVRCL质粒转化到大肠杆菌DH5α中形成含信号发生模块的大肠杆菌2。The promoters of the wild-type pnpR and the PNP catabolic operon pnpC were amplified from the pBBR1-tacpnpR and pCMgfp-spClacZ plasmids, respectively, and used to construct individual plasmids producing signals (primer lists are shown in Table 1). Amplified products were separated and purified by gel electrophoresis. The two genes, pnpR and pnpC, were fused by overlap extension PCR (OEP). The pSV-β-galactosidase plasmid vector (pSV-β-galactosidase vector) was purchased from Promega (Madison, WI, USA). The pSV-β-galactosidase vector and fused pnpR-pnpC were double digested with HindIII-BsaAI. Digests of pSV-β-galactosidase and fused pnpR-pnpC were mixed together and ligated overnight at 16°C to generate pSVRCL plasmid (Fig. 10A). In this plasmid, the pnpR gene was expressed under the control of the constitutive promoter SV40, and the lacZ gene was expressed under the control of the pnpC promoter. The pSVRCL plasmid was transformed into E. coli DH5α to form E. coli 2 containing the signal generation module.
表1Table 1
将含信号发生模块的大肠杆菌2进行微量滴定板测定以测试该系统的响应。出乎意料的是,系统失去了剂量依赖性的反应,因为在用或不用对氧磷孵育2小时后出现明显的蓝色(图11)。E. coli 2 containing the signaling module was subjected to a microtiter plate assay to test the response of the system. Unexpectedly, the system lost the dose-dependent response, as a distinct blue color appeared after 2 hours of incubation with and without paraoxon (Figure 11).
为了在所需位置终止SV40启动子的活性,将来自pET-28a(+)质粒的长T7末端区(48bp,T7终止子)插入到pnpR和pnpC之间以产生pSVRTCL质粒。将该重组质粒pSVRTCL转化大肠杆菌DH5α,形成含信号发生模块的大肠杆菌3。将含信号发生模块的大肠杆菌3进行微量滴定板测定以测试该系统的响应。如图4A和图10B所示,T7终止子的引入恢复了之前观察到的浓度依赖性反应。为了测试调节蛋白质的量增加是否抑制细胞生长,我们比较了携带pSVRTCL和pBBR1-tacpnpR质粒细胞的生长动力学。将携带pSVRTCL和pBBR1-tacpnpR的大肠杆菌在含有100μg/mL氨苄青霉素和50μg/mL卡那霉素的2YT培养基中于37℃培养几小时。当含有pBBR1-tacpnpR的细菌培养物的OD600达到0.6时,加入0.5mM IPTG,并将两种细胞培养物在30℃下继续培养24小时。通过测量培养液的OD600来确定细胞浓度。结果显示,增加的PnpR的产量不会导致明显的生长抑制(图12)。To terminate the activity of the SV40 promoter at the desired position, the long T7 terminal region (48bp, T7 terminator) from the pET-28a(+) plasmid was inserted between pnpR and pnpC to generate the pSVRTCL plasmid. The recombinant plasmid pSVRTCL was transformed into Escherichia coli DH5α to form Escherichia coli 3 containing the signal generation module. E. coli 3 containing the signaling module was subjected to a microtiter plate assay to test the response of the system. As shown in Figure 4A and Figure 10B, introduction of the T7 terminator restored the previously observed concentration-dependent response. To test whether increased amounts of regulatory proteins inhibit cell growth, we compared the growth kinetics of cells harboring pSVRTCL and pBBR1-tacpnpR plasmids. Escherichia coli carrying pSVRTCL and pBBR1-tacpnpR was cultured at 37°C for several hours in 2YT medium containing 100 µg/mL ampicillin and 50 µg/mL kanamycin. When the OD600 of the bacterial culture containing pBBR1-tacpnpR reached 0.6, 0.5 mM IPTG was added and both cell cultures were incubated at 30 °C for an additional 24 h. Cell concentration was determined by measuring the OD600 of the culture medium. The results showed that increased production of PnpR did not lead to significant growth inhibition (Figure 12).
采用化学发光实验检测含信号发生模块的大肠杆菌3的β-半乳糖苷酶活性。具体步骤如下:The β-galactosidase activity of Escherichia coli 3 containing the signal generation module was detected by chemiluminescence assay. Specific steps are as follows:
从平板中挑取新鲜的含信号发生模块的大肠杆菌3的单菌落,在含有5mL 2YT培养基中的试管中培养。培养6小时后,将1mL培养液接入含有100-mL 2YT培养基的培养瓶中。当培养物达到OD600为1时,将90μLpSVRTCL细胞培养物加入到含有90μL已表达24小时的OPH细胞培养物(OD600=1)的96孔板中。最后,将20μL不同浓度的OP加入到每个孔中,并将96孔板置于28℃,220rpm的振荡器中。3.5小时后,将细胞培养物离心,将细胞重新悬浮于200μL新鲜的2YT培养基中以除去OPs化合物。最后,收集OD600为0.30的细胞并置于黑色的96孔板中用于β-半乳糖苷酶活性测定。报告蛋白(β-半乳糖苷酶)的表达量使用基于化学发光的β-galactosidase测定系统来确定,操作方法参照产品说明书。测定诱导的化学发光(1s/孔)。结果如3B所示,光吸收与PNP浓度正相关。Pick a fresh single colony of Escherichia coli 3 containing the signal generating module from the plate, and culture it in a test tube containing 5 mL of 2YT medium. After culturing for 6 hours, 1 mL of the culture solution was transferred to a culture flask containing 100-mL of 2YT medium. When the culture reached an OD600 of 1, 90 μL of pSVRTCL cell culture was added to a 96-well plate containing 90 μL of OPH cell culture ( OD600 = 1) expressed for 24 hours. Finally, 20 μL of different concentrations of OP was added to each well, and the 96-well plate was placed in a shaker at 28 °C at 220 rpm. After 3.5 hours, the cell culture was centrifuged and the cells were resuspended in 200 μL of fresh 2YT medium to remove OPs compounds. Finally, cells with an OD600 of 0.30 were collected and placed in a black 96-well plate for β-galactosidase activity assay. The expression level of the reporter protein (β-galactosidase) was determined using a chemiluminescence-based β-galactosidase assay system, and the operation method was referred to the product manual. Induced chemiluminescence (1 s/well) was measured. The results are shown in 3B, the light absorption is positively correlated with the PNP concentration.
3、全细胞OPH活性3. Whole cell OPH activity
使用乙基对氧磷作为底物测量全细胞OPH活性。在IPTG诱导6,12,18和24小时后收获表达重组OPH的大肠杆菌细胞,用100mM磷酸盐缓冲液(pH7.4)洗涤两次,然后在相同的缓冲液中重悬至OD600为1。通过分光光度法测量405nm处的PNP形成(ε405=16,600M-1cm-1)来测量乙基对氧磷的水解。OPH活性测定在补充有1×10-4M底物和100μL细胞(OD600=1.0)的100mM磷酸盐缓冲液(pH7.4)中于28℃下进行。酶活性以1.0OD600全细胞的酶活力单位表示(1个酶活力单位等于每分钟水解1微摩尔底物量)。结果如图2B所示,OPH催化活性在指数期开始出现,并且在细胞达到稳定期后还在增加。值得注意的是,该时程关系表明了将INPNC-OPH融合物完全转移到细胞表面所需的时间。因此,将稳定后期(24小时)的细胞用于OP降解,因为这些细胞可以有效地分解污染物并且为信号发生模块产生最大量的PNP。Whole-cell OPH activity was measured using paraoxon ethyl as a substrate. E. coli cells expressing recombinant OPH were harvested after 6, 12, 18 and 24 hours of IPTG induction, washed twice with 100 mM phosphate buffer (pH 7.4), and then resuspended in the same buffer to an OD600 of 1 . Hydrolysis of ethylparaoxon was measured by spectrophotometrically measuring PNP formation at 405 nm (ε 405 = 16,600 M −1 cm −1 ). OPH activity assays were performed at 28°C in 100 mM phosphate buffer (pH 7.4) supplemented with 1×10 −4 M substrate and 100 μL of cells (OD 600 =1.0). Enzyme activity is represented by the enzyme activity unit of 1.0OD 600 whole cells (1 enzyme activity unit is equal to the hydrolysis of 1 micromole of substrate per minute). As a result, as shown in Figure 2B, the OPH catalytic activity started to appear in the exponential phase and continued to increase after the cells reached the stationary phase. Notably, this time course relationship indicates the time required for complete transfer of the INPNC-OPH fusion to the cell surface. Therefore, cells at the late stage of stabilization (24 hours) were used for OP degradation, as these cells can efficiently decompose pollutants and produce the greatest amount of PNP for the signaling module.
4、菌群生物传感系统对OPs的信号响应4. Signal response of flora biosensing system to OPs
用于OPs检测的基于菌群的生物传感系统示意图如图1所示。将市售的OPs如乙基对氧磷,甲基对氧磷,乙基对硫磷,甲基对硫磷,EPN和杀螟松溶解在乙腈中以获得浓度为1×10-1M的储备溶。The schematic diagram of the bacterium-based biosensing system for OPs detection is shown in Fig. 1. Dissolve commercially available OPs such as ethyl paraoxon, methyl paraoxon, ethyl parathion, methyl parathion, EPN and fenitrothion in acetonitrile to obtain a concentration of 1 × 10-1 M Reserve solution.
离心收集已经培养24小时的OPH大肠杆菌细胞(即含OPH信号感应模块的大肠杆菌),并用新鲜培养基稀释以达到OD600为1。The OPH E. coli cells that had been cultured for 24 hours (that is, E. coli containing the OPH signal sensing module) were collected by centrifugation, and diluted with fresh medium to achieve an OD600 of 1.
3种信号发生大肠杆菌细胞(即含信号发生模块的大肠杆菌1-3)均在100-mL培养瓶中生长直至OD600为1。The three signal-generating E. coli cells (ie, E. coli 1-3 containing the signal-generating module) were all grown in 100-mL culture flasks until the OD 600 was 1.
OPH大肠杆菌与发生器大肠杆菌细胞比率为1:1,用于基于96孔微量滴定板的OPs检测。使用20μL不同OPs化合物的母液来稀释得到1×10-4~1×10-10M的终浓度。将10μL的10mg/mL X-gal溶液添加至每个孔中,然后将培养板在平板摇床中220rpm和28℃培养。将用OP诱导的等分试样孵育最多5小时,并使用SpectraMax○R M5酶标仪以30分钟间隔测量诱导的和未诱导的培养物在650nm处的吸光度。如图5所示,吸光度值随着感应(或曝光)时间的增加而增加,如曲线的正斜率所反映的。如图5B所示,该系统表现出可预测的和剂量依赖性的方式,与目视检查的结果一致。如图6A,我们发现,类似于乙基对氧磷检测中观察到的信号响应,共培养基的颜色从所有测试的农药逐渐由浅黄色变为深蓝色(图6B)。对于测试的OPs,我们还通过测量酶促反应的程度来进行基于化学发光的测定(图13)。通过比较检测结果,发现对于不同的农药,基于菌群体系的灵敏度从1×10-9M到1×10-5M不等。对于常见的OPs化合物,该系统的灵敏度比单细胞比色法灵敏2-4倍。我们还注意到,杀螟松灵敏度为1×10-5M,即这可能是由于OPH对该底物的催化效率低下或由于2-甲基-4-硝基苯酚的生成而不是对硝基苯酚的产生。A 1:1 ratio of OPH E. coli to generator E. coli cells is used for 96-well microtiter plate-based assays of OPs. 20 μL of stock solutions of different OPs compounds were used to dilute to obtain a final concentration of 1×10 −4 ~1×10 −10 M. 10 μL of 10 mg/mL X-gal solution was added to each well, and then the culture plate was incubated on a plate shaker at 220 rpm and 28°C. Aliquots induced with OP were incubated for a maximum of 5 hours and the absorbance at 650 nm of induced and uninduced cultures was measured at 30 min intervals using a SpectraMax® M5 microplate reader. As shown in Figure 5, absorbance values increase with increasing sensing (or exposure) time, as reflected by the positive slope of the curve. As shown in Figure 5B, the system exhibited a predictable and dose-dependent manner, consistent with the results of visual inspection. As shown in Figure 6A, we found that, similar to the signal response observed in the ethyl paraoxon assay, the color of the co-culture medium gradually changed from light yellow to dark blue for all pesticides tested (Figure 6B). For the OPs tested, we also performed a chemiluminescence-based assay by measuring the extent of the enzymatic reaction (Figure 13). By comparing the detection results, it was found that for different pesticides, the sensitivities based on the flora system ranged from 1×10 -9 M to 1×10 -5 M. For common OPs compounds, the system is 2-4 times more sensitive than single-cell colorimetric methods. We also noted that the fenitrothion sensitivity was 1×10 -5 M, i.e. this could be due to inefficient catalytic performance of OPH on this substrate or due to the formation of 2-methyl-4-nitrophenol instead of p-nitro Phenol production.
通过改变两种细胞类型(含OPH信号感应模块的大肠杆菌和含信号发生模块的大肠杆菌1)的相对丰度(10:1,3:1,1:1,1:3和1:10),同时保持它们的总密度相同(OD600=1.0),我们发现输出的颜色吸光度遵循“钟形”变化,吸光度最高出现在1:1和1:3的比例(图9)。这个结果证实了三层信息。首先,基于菌群的系统能够成功地检测乙基对氧磷。其次,检测需要两种菌株来完成任务,即OPH转换和信号生成。第三,检测的性能取决于两个菌株的相对丰度。以1:1的比例,我们接下来通过在2YT液体培养基中补充不同浓度的乙基对氧磷(从1×10-10到1×10-6),将两种菌株的悬浮培养物共培养来检测生物传感系统的检测极限10-4M。如图4C(行I)所示,我们观察到响应的颜色强度随着乙基对氧磷的浓度而增加,表明颜色强度与乙基对氧磷的浓度之间呈正相关。值得注意的是,系统响应的极限被发现是1×10-6M的乙基对氧磷。从该测定中,我们还发现将全部活性表面表达的OPH(更容易达到PNP的阈值量)与处于指数生长阶段的信号发生细胞偶联,导致响应时间(3.5小时)显著短于以前的报道(约6小时)。与对照相比,乙基对氧磷浓度低至1×10-9M时还显示着明显的颜色增加。相反,在高于1×10-6M的浓度下,2小时内就能检测到信号。By changing the relative abundance (10:1, 3:1, 1:1, 1:3 and 1:10) of the two cell types (E. coli with OPH signal sensing module and E. coli 1 with signal generation module) , while keeping their overall densities the same (OD600 = 1.0), we found that the output color absorbance followed a “bell-shaped” variation, with the highest absorbance occurring at the 1:1 and 1:3 ratios (Fig. 9). This result confirms three layers of information. First, the flora-based system was able to successfully detect ethyl paraoxon. Second, the assay requires two strains for the task, namely OPH conversion and signal generation. Third, the performance of the assay depends on the relative abundance of the two strains. At a 1:1 ratio, we next co-cultured suspension cultures of the two strains by supplementing 2YT liquid medium with different concentrations of paraoxon ethyl (from 1×10 −10 to 1×10 −6 ). The detection limit of the cultured biosensing system was 10 -4 M. As shown in Figure 4C (row I), we observed that the color intensity of the responses increased with the concentration of ethyl paraoxon, indicating a positive correlation between the color intensity and the concentration of ethyl paraoxon. Notably, the limit of system response was found to be 1 x 10 -6 M ethyl paraoxon. From this assay, we also found that cellular coupling of fully active surface-expressed OPH (which more readily reaches the threshold amount of PNP) to a signal in the exponential growth phase resulted in a significantly shorter response time (3.5 h) than previously reported ( about 6 hours). Ethyl paraoxon concentrations as low as 1 x 10 -9 M also showed a marked increase in color compared to the control. In contrast, at concentrations higher than 1×10 -6 M, a signal was detectable within 2 hours.
OPH大肠杆菌分别与含信号发生模块的大肠杆菌2或3的悬浮培养物共培养相应对乙基对氧磷的灵敏度,结构如图4A和图4B所示,在低至1×10-9M乙基对氧磷的浓度下还观察到可检测的颜色水平(图4C,行II)。结果表明,含信号发生模块的大肠杆菌2或3的灵敏度从起始系统(含有pBBR1-tacpnpR和pCMgfp-spClacZ质粒的细胞)成功地增加了三个数量级(图4A,行I;图4B,圆圈和图4C,第一行)。Co-cultivation of OPH Escherichia coli with suspension cultures of Escherichia coli 2 or 3 containing the signal generating module, respectively, corresponds to the sensitivity to ethyl paraoxon, the structure is shown in Figure 4A and Figure 4B . Detectable levels of color were also observed at concentrations of ethyl paraoxon (FIG. 4C, row II). The results showed that the sensitivity of E. coli 2 or 3 containing the signaling module was successfully increased by three orders of magnitude from the starting system (cells containing pBBR1-tacpnpR and pCMgfp-spClacZ plasmids) (Fig. 4A, row I; Fig. 4B, circles and Figure 4C, first row).
实施例2、滤纸传感条的制备Embodiment 2, the preparation of filter paper sensing strip
根据前述的基于菌群的生物传感系统制备传感纸条。简而言之,是将两种细胞类型以1:1的比例悬浮于在37℃预热的无菌干燥保护溶液中。在Whatman滤纸条(0.6×4cm)上点上5μL细胞悬浮液,然后将这些纸条在层流空气箱中干燥10分钟,随后在冻干器20℃进行真空干燥。然后将滤纸传感条在4℃下储存备用。Sensing paper strips were prepared according to the aforementioned flora-based biosensing system. Briefly, the two cell types were suspended in a 1:1 ratio in sterile dry protection solution pre-warmed at 37°C. 5 μL of the cell suspension was spotted on Whatman filter paper strips (0.6×4 cm), and the strips were dried in a laminar air oven for 10 minutes, followed by vacuum drying at 20° C. in a lyophilizer. The filter paper sensor strips were then stored at 4°C until use.
实施例3、滤纸传感条上的剂量反应OPs曲线的测定Embodiment 3, the mensuration of the dose-response OPs curve on the filter paper sensing strip
用含有50mM氯化钠,氯化钾和氯化镁各50mM的HEPES缓冲液(pH7.0)稀释乙基对氧磷(浓度为1×10-3-1×10-9M)。取100μL每种标准溶液添加到含有900μL2YT培养基和制备好的滤纸条的培养管中。然后将培养管在28℃下静置温育2小时。然后将纸条从培养管中取出并保持在保鲜膜层之间以防止干燥。随后,取10μL溶解在DMF中的X-gal底物溶液(50mg/mL)小心地添加到含有传感细胞的位置,并使显色进行90分钟。如图7A所示,随着乙基对氧磷的浓度增加,纸条的细胞保留区从无色变为蓝色。Ethyl paraoxon (concentration of 1×10 - 3 -1×10 -9 M) was diluted with HEPES buffer (pH 7.0) containing 50 mM each of sodium chloride, potassium chloride and magnesium chloride. Take 100 μL of each standard solution and add to the culture tube containing 900 μL 2YT medium and prepared filter paper strips. The culture tubes were then incubated statically at 28°C for 2 hours. The paper strips were then removed from the culture tubes and kept between layers of plastic wrap to prevent drying. Subsequently, 10 μL of X-gal substrate solution (50 mg/mL) dissolved in DMF was carefully added to the site containing the sensor cells, and color development was allowed to proceed for 90 minutes. As shown in Figure 7A, as the concentration of ethyl paraoxon was increased, the cell-retained area of the paper strip changed from colorless to blue.
除了目测观察显色的蓝色之外,还使用ImageJsoftware(NIH,Bethesda,MD,USA)(http://rsbweb.nih.gov/ij/)测量颜色强度。简单地说,ImageJ中的测量设置为平均灰度值,并且图像被反转。由于ImageJ将100%黑色记录为0,将100%白色记录为255,所以图像的反转是必要的。使用选择工具在要测量的点周围绘制矩形截面,并记录平均灰度值。测定光点附近相同的矩形面积作为背景值,以考虑由于拍摄照片时的环境照明的差异导致的色彩强度的变化。基本上,最后的颜色强度信号是针对空白和照度相关的颜色强度变化进行校正的。ImageJ软件分析证实了通过目测评估纸条获得的结果(图7B),表明所测量的颜色强度与乙基对氧磷浓度的对数之间的线性关系。结果还表明,在该设置下,传感系统可以在1.5h内以1×10-7M的浓度清晰地检测乙基对氧磷。总之,这些结果证明了使用纸基菌群生物传感器可靠地检测OPs的可行性,这在发展中国家和偏远社会特别有用。In addition to visual observation of the developed blue color, color intensity was also measured using ImageJ software (NIH, Bethesda, MD, USA) (http://rsbweb.nih.gov/ij/). Briefly, measurements in ImageJ were set to mean gray values and images were inverted. The inversion of the image was necessary because ImageJ recorded 100% black as 0 and 100% white as 255. Use the selection tool to draw a rectangular section around the point to be measured and record the average gray value. The area of the same rectangle around the light spot is determined as the background value to account for variations in color intensity due to differences in ambient lighting when the photo was taken. Basically, the final color intensity signal is corrected for blank and illuminance dependent color intensity variations. ImageJ software analysis confirmed the results obtained by visual evaluation of the strips (Figure 7B), showing a linear relationship between the measured color intensity and the logarithm of the ethylparaoxon concentration. The results also showed that under this setting, the sensing system could clearly detect ethyl paraoxon at a concentration of 1×10 -7 M within 1.5 h. Taken together, these results demonstrate the feasibility of using paper-based flora biosensors to reliably detect OPs, which is particularly useful in developing countries and remote societies.
实施例4、真实样品测试Embodiment 4, real sample test
本实施例制备并测量加入了乙基对氧磷的苹果和土壤样品。在该测定中,收集约1g土壤并溶解于900μl水中。为了比较,还测试了乙基对氧磷(1×10-5或1×10-6M)的标准溶液。将收集的苹果切成块并捣碎,将1g粉碎的苹果溶于900μl水中,形成样品溶液1。将1g收集的土壤溶于900μl水中,形成样品溶液2。This example prepares and measures apple and soil samples to which paraoxon ethyl has been added. In this assay, approximately 1 g of soil was collected and dissolved in 900 μl of water. For comparison, a standard solution of ethyl paraoxon (1×10 −5 or 1×10 −6 M) was also tested. The collected apples were cut into pieces and mashed, and 1 g of the crushed apples was dissolved in 900 μl of water to form sample solution 1. 1 g of the collected soil was dissolved in 900 μl of water to form sample solution 2.
将两种样品溶液在37℃和8000rpm下离心10分钟,再通过0.22-μmPVDF过滤器过滤上清液并用去离子水稀释2倍。随后,将上清液加入乙基对氧磷溶液中以获得1×10-5和1×10-6M的浓度。最后,使用显影的生物传感器检测加入标准的OPs浓度,并使用Spectramax○RM5读板器测量650nm处的吸光度。如图8所示,苹果和土壤样品获得的响应值与标准溶液具有相同的模式。此外,苹果和土壤样品中加入的乙基对氧磷的回收率范围为89.40±5.1至94.80±6.9%(表2),表明该新型传感平台可以适用于实际测定OPs样本。The two sample solutions were centrifuged at 37 °C and 8000 rpm for 10 min, and the supernatant was filtered through a 0.22-μm PVDF filter and diluted 2-fold with deionized water. Subsequently, the supernatant was added to the ethyl paraoxon solution to obtain concentrations of 1×10 -5 and 1×10 -6 M. Finally, the concentration of the added standard OPs was detected using a developed biosensor and the absorbance at 650 nm was measured using a Spectramax® RM5 plate reader. As shown in Figure 8, the responses obtained for the apple and soil samples followed the same pattern as the standard solutions. In addition, the recoveries of spiked ethyl paraoxon in apple and soil samples ranged from 89.40 ± 5.1 to 94.80 ± 6.9% (Table 2), indicating that the novel sensing platform can be applied to the practical determination of OPs samples.
表2苹果和土壤中乙基对氧磷的加标回收率(数值为三次测定的平均值)The recovery rate of standard addition of ethyl paraoxon in table 2 apple and soil (value is the mean value of three determinations)
以上对本发明的具体实施例进行了描述。需要理解的是,本发明并不局限于上述特定实施方式,本领域技术人员可以在权利要求的范围内做出各种变化或修改,这并不影响本发明的实质内容。在不冲突的情况下,本申请的实施例和实施例中的特征可以任意相互组合。Specific embodiments of the present invention have been described above. It should be understood that the present invention is not limited to the specific embodiments described above, and those skilled in the art may make various changes or modifications within the scope of the claims, which do not affect the essence of the present invention. In the case of no conflict, the embodiments of the present application and the features in the embodiments can be combined with each other arbitrarily.
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CN113466162A (en) * | 2021-06-28 | 2021-10-01 | 北京农业质量标准与检测技术研究中心 | Rapid detection method of total phosphorus paraoxonate by ultraviolet spectrophotometry |
CN114774339A (en) * | 2022-04-12 | 2022-07-22 | 深圳大学 | Whole-cell biosensor for detecting p-nitrophenol and detection method |
CN116064629A (en) * | 2022-10-14 | 2023-05-05 | 厦门大学 | Universal plasmid for escherichia coli surface display system and construction method thereof |
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Cited By (5)
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CN113466162A (en) * | 2021-06-28 | 2021-10-01 | 北京农业质量标准与检测技术研究中心 | Rapid detection method of total phosphorus paraoxonate by ultraviolet spectrophotometry |
CN114774339A (en) * | 2022-04-12 | 2022-07-22 | 深圳大学 | Whole-cell biosensor for detecting p-nitrophenol and detection method |
CN114774339B (en) * | 2022-04-12 | 2023-10-20 | 深圳大学 | Whole-cell biosensor for detecting p-nitrophenol and detection method |
CN116064629A (en) * | 2022-10-14 | 2023-05-05 | 厦门大学 | Universal plasmid for escherichia coli surface display system and construction method thereof |
CN116064629B (en) * | 2022-10-14 | 2024-07-05 | 厦门大学 | Universal plasmid for escherichia coli surface display system and construction method thereof |
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