CN108314713A - L-threonine transport protein thrg and its encoding gene and application - Google Patents
L-threonine transport protein thrg and its encoding gene and application Download PDFInfo
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- CN108314713A CN108314713A CN201710028653.4A CN201710028653A CN108314713A CN 108314713 A CN108314713 A CN 108314713A CN 201710028653 A CN201710028653 A CN 201710028653A CN 108314713 A CN108314713 A CN 108314713A
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- threonine
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- C07K14/195—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
- C07K14/34—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria from Corynebacterium (G)
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P13/00—Preparation of nitrogen-containing organic compounds
- C12P13/04—Alpha- or beta- amino acids
- C12P13/08—Lysine; Diaminopimelic acid; Threonine; Valine
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Abstract
本发明公开了一种L‑苏氨酸转运蛋白ThrG及其编码基因与应用。本发明提供的蛋白质,命名为ThrG蛋白,是如下(a)或(b):(a)由序列表中序列1所示的氨基酸序列组成的蛋白质;(b)将序列1的氨基酸序列经过一个或几个氨基酸残基的取代和/或缺失和/或添加且与L‑苏氨酸转运相关的由序列1衍生的蛋白质。编码ThrG蛋白的基因也属于本发明的保护范围,将其命名为thrG基因。本发明还保护ThrG蛋白的应用:作为L‑苏氨酸转运蛋白;促进L‑苏氨酸转运;促进L‑苏氨酸转运至微生物体外生产L‑苏氨酸。本发明具有重大的应用价值。The invention discloses an L-threonine transporter ThrG and its coding gene and application. The protein provided by the present invention, named as ThrG protein, is the following (a) or (b): (a) a protein composed of the amino acid sequence shown in sequence 1 in the sequence listing; (b) the amino acid sequence of sequence 1 is processed through a or a substitution and/or deletion and/or addition of several amino acid residues and a protein derived from sequence 1 associated with L-threonine transport. The gene encoding ThrG protein also belongs to the protection scope of the present invention, and it is named as thrG gene. The invention also protects the application of the ThrG protein: as L-threonine transporter; promoting L-threonine transport; promoting L-threonine transport to microorganisms to produce L-threonine in vitro. The invention has great application value.
Description
技术领域technical field
本发明属于生物技术领域,具体涉及一种L-苏氨酸转运蛋白ThrG及其编码基因与应用。The invention belongs to the field of biotechnology, and in particular relates to an L-threonine transporter ThrG and its coding gene and application.
背景技术Background technique
L-苏氨酸是必需氨基酸之一,在医药、食品以及饲料领域有广泛的应用。食品领域,是一种重要的营养强化剂,可以强化谷物、糕点、乳制品,有缓解人体疲劳,促进生长发育的效果。医药领域,对人体皮肤具有持水作用,对保护细胞膜起重要作用,在体内能促进磷脂合成和脂肪酸氧化。饲料领域,广泛用作仔猪饲料、种猪饲料、肉鸡饲料、对虾饲料和鳗鱼饲料等的添加物,可调整饲料中氨基酸平衡促进生长,可改善肉质,可降低畜禽粪便和尿液中的含氮量、畜禽舍中氨气浓度及释放速度。L-threonine is one of the essential amino acids and is widely used in the fields of medicine, food and feed. In the field of food, it is an important nutritional enhancer, which can strengthen grains, cakes, and dairy products, and has the effect of relieving human fatigue and promoting growth and development. In the field of medicine, it has a water-holding effect on human skin, plays an important role in protecting cell membranes, and can promote phospholipid synthesis and fatty acid oxidation in the body. In the field of feed, it is widely used as an additive for piglet feed, breeding pig feed, broiler feed, prawn feed and eel feed, etc. It can adjust the balance of amino acids in feed to promote growth, improve meat quality, and reduce nitrogen in livestock manure and urine. amount, ammonia concentration and release rate in livestock and poultry houses.
氨基酸的转运是细胞生命活动的重要环节之一。在原核以及真核细胞中都存在氨基酸转运系统。细胞通过內运系统从外部环境摄取氨基酸用于细胞内物质的合成,为生命活动提供碳源和氮源以及能源。通过外运系统将代谢物分泌到细胞外。大多数氨基酸可以通过发酵法生产。基于对氨基酸转运系统的了解,可以在氨基酸生产菌株的理性改造方面定向对其进行修饰,从而实现提高产量的目的。Amino acid transport is one of the important links in cell life activities. Amino acid transport systems exist in both prokaryotic and eukaryotic cells. Cells absorb amino acids from the external environment through the internal transport system for the synthesis of intracellular substances, providing carbon and nitrogen sources and energy for life activities. Metabolites are secreted outside the cell through the export system. Most amino acids can be produced by fermentation. Based on the understanding of the amino acid transport system, it can be modified in the rational transformation of amino acid production strains, so as to achieve the purpose of increasing production.
发明内容Contents of the invention
本发明的目的是提供一种L-苏氨酸转运蛋白ThrG及其编码基因与应用。The object of the present invention is to provide an L-threonine transporter ThrG and its coding gene and application.
本发明提供的蛋白质,获自谷氨酸棒杆菌(C.glutamicum),命名为ThrG蛋白,是如下(a)或(b):The protein provided by the present invention is obtained from Corynebacterium glutamicum (C.glutamicum), named as ThrG protein, and is as follows (a) or (b):
(a)由序列表中序列1所示的氨基酸序列组成的蛋白质;(a) a protein consisting of the amino acid sequence shown in Sequence 1 in the Sequence Listing;
(b)将序列1的氨基酸序列经过一个或几个氨基酸残基的取代和/或缺失和/或添加且与L-苏氨酸转运相关的由序列1衍生的蛋白质。(b) A protein derived from Sequence 1 in which the amino acid sequence of Sequence 1 has undergone substitution and/or deletion and/or addition of one or several amino acid residues and is related to L-threonine transport.
上述蛋白中,所述一个或几个氨基酸残基的取代和/或缺失和/或添加是指不多于十个氨基酸残基的取代和/或缺失和/或添加。In the above protein, the substitution and/or deletion and/or addition of one or several amino acid residues refers to the substitution and/or deletion and/or addition of no more than ten amino acid residues.
为了使(b)中的蛋白质便于纯化和检测,可在由序列表中序列1所示的氨基酸序列组成的蛋白质的氨基末端或羧基末端连接上如表1所示的标签。In order to facilitate the purification and detection of the protein in (b), the amino-terminal or carboxyl-terminal of the protein consisting of the amino acid sequence shown in Sequence 1 in the sequence listing can be linked with the tags shown in Table 1.
表1标签的序列Table 1 Sequence of tags
上述(b)中的蛋白质可人工合成,也可先合成其编码基因,再进行生物表达得到。上述(b)中的蛋白质的编码基因可通过将序列表中序列2所示的DNA序列中缺失一个或几个氨基酸残基的密码子,和/或进行一个或几个碱基对的错义突变,和/或在其5′端和/或3′端连上表1所示的标签的编码序列得到。The protein in (b) above can be synthesized artificially, or its coding gene can be synthesized first, and then obtained by biological expression. The protein-encoding gene in (b) above can be deleted by deleting one or several amino acid residue codons in the DNA sequence shown in Sequence 2 in the sequence listing, and/or carrying out one or several base pairs of missense mutation, and/or link the coding sequence of the tag shown in Table 1 at its 5' end and/or 3' end.
编码ThrG蛋白的基因也属于本发明的保护范围,将其命名为thrG基因。The gene encoding ThrG protein also belongs to the protection scope of the present invention, and it is named as thrG gene.
thrG基因为如下1)至6)中任一所述的DNA分子:The thrG gene is the DNA molecule described in any one of the following 1) to 6):
1)编码区如序列表中序列2第1至678位核苷酸所示的DNA分子;1) A DNA molecule whose coding region is as shown in nucleotides 1 to 678 of Sequence 2 in the sequence listing;
2)编码区如序列表中序列2所示的DNA分子;2) a DNA molecule whose coding region is shown in sequence 2 in the sequence listing;
3)编码区如序列表中序列6第14-694位核苷酸所示的DNA分子;3) a DNA molecule whose coding region is as shown in nucleotides 14-694 of Sequence 6 in the Sequence Listing;
4)序列表中序列6所示的DNA分子;4) the DNA molecule shown in sequence 6 in the sequence listing;
5)在严格条件下与1)或2)或3)或4)限定的DNA序列杂交且编码L-苏氨酸转运相关蛋白的DNA分子;5) A DNA molecule that hybridizes to the DNA sequence defined in 1) or 2) or 3) or 4) under stringent conditions and encodes an L-threonine transport-related protein;
6)与1)或2)或3)或4)限定的DNA序列具有90%以上同源性且编码与L-苏氨酸转运相关蛋白的DNA分子。6) A DNA molecule having more than 90% homology with the DNA sequence defined in 1) or 2) or 3) or 4) and encoding a protein related to L-threonine transport.
上述严格条件可为用0.1×SSPE(或0.1×SSC),0.1%SDS的溶液,在DNA或者RNA杂交实验中65℃下杂交并洗膜。The above-mentioned stringent conditions can be 0.1×SSPE (or 0.1×SSC), 0.1% SDS solution, hybridization at 65° C. in DNA or RNA hybridization experiments and membrane washing.
含有thrG基因的重组表达载体、表达盒、转基因细胞系、转基因植物组织或重组菌均属于本发明的保护范围。Recombinant expression vectors, expression cassettes, transgenic cell lines, transgenic plant tissues or recombinant bacteria containing thrG gene all belong to the protection scope of the present invention.
可用现有的表达载体构建含有thrG基因的重组表达载体。使用thrG基因构建重组表达载体时,可在其转录起始核苷酸前加上任何一种增强型、组成型、组织特异型或诱导型启动子,它们可单独使用或与其它的启动子结合使用;此外,使用thrG基因构建重组表达载体时,还可使用增强子,包括翻译增强子或转录增强子,这些增强子区域可以是起始密码子或邻接区域起始密码子等,但必需与编码序列的阅读框相同,以保证整个序列的正确翻译。所述翻译控制信号和起始密码子的来源是广泛的,可以是天然的,也可以是合成的。翻译起始区域可以来自转录起始区域或结构基因。为了便于对转基因微生物进行鉴定及筛选,可对所用表达载体进行加工,如加入在微生物中表达可产生颜色变化的酶或发光化合物的基因、具有抗性的抗生素标记物或是抗化学试剂标记基因等。从转基因安全性考虑,可不加任何选择性标记基因。An existing expression vector can be used to construct a recombinant expression vector containing the thrG gene. When using the thrG gene to construct a recombinant expression vector, any enhanced, constitutive, tissue-specific or inducible promoter can be added before its transcription initiation nucleotide, and they can be used alone or combined with other promoters Use; In addition, when using the thrG gene to construct a recombinant expression vector, enhancers can also be used, including translation enhancers or transcription enhancers, and these enhancer regions can be start codons or adjacent region start codons, etc., but must be compatible with The reading frame of the coding sequences is identical to ensure correct translation of the entire sequence. The sources of the translation control signals and initiation codons are extensive and can be natural or synthetic. The translation initiation region can be from a transcription initiation region or a structural gene. In order to facilitate the identification and screening of genetically modified microorganisms, the expression vectors used can be processed, such as adding genes that express enzymes or luminescent compounds that can produce color changes in microorganisms, antibiotic markers with resistance, or anti-chemical reagent marker genes Wait. Considering the safety of the transgene, any selectable marker gene may not be added.
所述重组表达载体具体可为如下重组质粒:在pXMJ19载体的多克隆位点(例如XbaI和Kpn I酶切位点之间)插入thrG基因得到的重组质粒。The recombinant expression vector can specifically be the following recombinant plasmid: a recombinant plasmid obtained by inserting the thrG gene into the multiple cloning site of the pXMJ19 vector (for example, between XbaI and KpnI restriction sites).
本发明还保护ThrG蛋白的应用,为如下(c1)至(c7)中的至少一种:The present invention also protects the application of ThrG protein, which is at least one of the following (c1) to (c7):
(c1)作为L-苏氨酸转运蛋白;(c1) as an L-threonine transporter;
(c2)促进L-苏氨酸转运;(c2) promoting L-threonine transport;
(c3)促进L-苏氨酸转运至微生物体外;(c3) promoting the transport of L-threonine to the outside of the microorganism;
(c4)促进L-苏氨酸转运至细菌体外;(c4) promote the transport of L-threonine to the outside of the bacteria;
(c5)促进L-苏氨酸转运至谷氨酸棒杆菌体外;(c5) promoting L-threonine transport to Corynebacterium glutamicum in vitro;
(c6)促进L-苏氨酸转运至谷氨酸棒杆菌m-85菌体外;(c6) promoting L-threonine to be transported outside Corynebacterium glutamicum m-85 bacterium;
(c7)生产L-苏氨酸。(c7) Production of L-threonine.
本发明还保护一种重组微生物,是将thrG基因导入目的微生物得到的。所述目的微生物为可以生产L-苏氨酸的微生物。所述目的微生物可为细菌,具体可为谷氨酸棒杆菌,更具体可为谷氨酸棒杆菌m-85。thrG基因具体可通过所述重组表达载体导入目的微生物。所述目的微生物还可为后续所述的重组菌A或重组菌B。The invention also protects a recombinant microorganism obtained by introducing the thrG gene into the target microorganism. The target microorganism is a microorganism capable of producing L-threonine. The target microorganism can be bacteria, specifically Corynebacterium glutamicum, more specifically Corynebacterium glutamicum m-85. Specifically, the thrG gene can be introduced into the target microorganism through the recombinant expression vector. The target microorganism can also be the recombinant bacteria A or recombinant bacteria B described later.
本发明还保护所述重组微生物在生产L-苏氨酸中的应用。The present invention also protects the use of the recombinant microorganism in the production of L-threonine.
本发明还保护一种生产L-苏氨酸的方法,包括如下步骤:发酵所述重组微生物,从发酵上清中获得L-苏氨酸。所述发酵的条件具体可为:30℃、300rpm振荡培养。所述发酵的时间具体可为72小时。所述发酵采用的培养基为以葡萄糖为碳源的培养基。所述发酵采用的培养基具体可为(仅为示例)(pH7.0):葡萄糖80g、(NH4)2SO4 20g、KH2PO4 1.5g、MgSO4·7H2O 0.4g、MnCl2·4H2O 10mg、FeSO4·7H2O 10mg、生物素50μg、硫胺素200μg、L-甲硫氨酸37.5mg、CaCO320g,用水定容至1L。The invention also protects a method for producing L-threonine, comprising the following steps: fermenting the recombinant microorganism, and obtaining L-threonine from the fermentation supernatant. The specific fermentation conditions may be: 30° C., 300 rpm shaking culture. The specific fermentation time can be 72 hours. The culture medium used in the fermentation is the culture medium with glucose as the carbon source. The medium used for the fermentation can specifically be (just an example) (pH7.0): glucose 80g, (NH 4 ) 2 SO 4 20g, KH 2 PO 4 1.5g, MgSO 4 ·7H 2 O 0.4g, MnCl 2 ·4H 2 O 10mg, FeSO 4 ·7H 2 O 10mg, biotin 50μg, thiamine 200μg, L-methionine 37.5mg, CaCO 3 20g, dilute to 1L with water.
本发明还保护一种生产L-苏氨酸的试剂盒,包括所述重组微生物。所述试剂盒还可包括常规的或自行优化设计的发酵培养基。所述试剂盒还可包括常规的或自行优化设计的种子培养基。所述种子培养基具体可为(仅为示例):蛋白胨10g、酵母粉5g、氯化钠10g、葡萄糖10g、尿素2g,用水定容至1L。所述发酵培养基具体可为(仅为示例)(pH7.0):葡萄糖80g、(NH4)2SO420g、KH2PO41.5g、MgSO4·7H2O 0.4g、MnCl2·4H2O10mg、FeSO4·7H2O 10mg、生物素50μg、硫胺素200μg、L-甲硫氨酸37.5mg、CaCO320g,用水定容至1L。The invention also protects a kit for producing L-threonine, including the recombinant microorganism. The kit can also include a conventional or self-optimized fermentation medium. The kit can also include conventional or self-optimized seed culture medium. The seed culture medium can specifically be (just an example): 10 g of peptone, 5 g of yeast powder, 10 g of sodium chloride, 10 g of glucose, and 2 g of urea, and the volume is adjusted to 1 L with water. The specific fermentation medium can be (only for example) (pH7.0): glucose 80g, (NH 4 ) 2 SO 4 20g, KH 2 PO 4 1.5g, MgSO 4 ·7H 2 O 0.4g, MnCl 2 · 4H 2 O 10mg, FeSO 4 ·7H 2 O 10mg, biotin 50μg, thiamine 200μg, L-methionine 37.5mg, CaCO 3 20g, dilute to 1L with water.
本发明还保护一种重组菌,为重组菌A或重组菌B。The invention also protects a recombinant bacterium, which is recombinant bacterium A or recombinant bacterium B.
所述重组菌A是将目的菌基因组中的thrG基因沉默,得到的重组菌。The recombinant bacterium A is a recombinant bacterium obtained by silencing the thrG gene in the genome of the target bacterium.
将目的菌基因组中的thrG基因沉默的实现方式具体可为同源重组。将目的菌基因组中的thrG基因沉默的实现方式具体包括如下步骤:将特异DNA分子A或含有所述特异DNA分子A的重组质粒A导入所述目的菌,然后筛选得到基因组中thrG基因全部或部分敲除的重组菌。所述特异DNA分子A通过同源重组将thrG基因全部或部分敲除。所述特异DNA分子A具体可为序列表的序列3所示的DNA分子。所述重组质粒A具体可为将pK18mobsacB载体Sal I和EcoR I酶切位点之间的小片段取代为序列表的序列3所示的双链DNA分子得到的重组质粒。The realization method of silencing the thrG gene in the genome of the target bacterium can specifically be homologous recombination. The realization of the silencing of the thrG gene in the genome of the target bacterium specifically includes the following steps: introducing a specific DNA molecule A or a recombinant plasmid A containing the specific DNA molecule A into the target bacterium, and then screening to obtain all or part of the thrG gene in the genome Knockout recombinant bacteria. The specific DNA molecule A knocks out all or part of the thrG gene through homologous recombination. The specific DNA molecule A may specifically be the DNA molecule shown in sequence 3 of the sequence listing. The recombinant plasmid A can specifically be a recombinant plasmid obtained by substituting the small fragment between the Sal I and EcoR I restriction sites of the pK18mobsacB vector with the double-stranded DNA molecule shown in sequence 3 of the sequence listing.
所述重组菌B是将目的菌基因组中的thrG基因和thrE基因沉默,得到的重组菌。The recombinant bacterium B is a recombinant bacterium obtained by silencing the thrG gene and thrE gene in the genome of the target bacterium.
thrE基因为如下1)至3)中任一所述的DNA分子:The thrE gene is the DNA molecule described in any one of the following 1) to 3):
1)编码区如序列表中序列4所示的DNA分子;1) a DNA molecule whose coding region is shown in sequence 4 in the sequence listing;
2)在严格条件下与1)限定的DNA序列杂交且编码L-苏氨酸转运相关蛋白的DNA分子;2) a DNA molecule that hybridizes to the DNA sequence defined in 1) under stringent conditions and encodes an L-threonine transport-related protein;
3)与1)限定的DNA序列具有90%以上同源性且编码与L-苏氨酸转运相关蛋白的DNA分子。3) A DNA molecule having more than 90% homology with the DNA sequence defined in 1) and encoding a protein related to L-threonine transport.
上述严格条件可为用0.1×SSPE(或0.1×SSC),0.1%SDS的溶液,在DNA或者RNA杂交实验中65℃下杂交并洗膜。The above-mentioned stringent conditions can be 0.1×SSPE (or 0.1×SSC), 0.1% SDS solution, hybridization at 65° C. in DNA or RNA hybridization experiments and membrane washing.
将目的菌基因组中的thrG基因和thrE基因沉默的实现方式具体可为同源重组。将目的菌基因组中的thrG基因和thrE基因沉默的实现方式具体包括如下步骤:将元件A和元件B导入所述目的菌(可同时导入,也可分步导入),然后筛选得到基因组中thrG基因全部或部分敲除且thrE基因全部或部分敲除的重组菌。所述元件A为特异DNA分子A或含有所述特异DNA分子A的重组质粒A。所述特异DNA分子A通过同源重组将thrG基因全部或部分敲除。所述特异DNA分子A具体可为序列表的序列3所示的DNA分子。所述重组质粒A具体可为将pK18mobsacB载体Sal I和EcoR I酶切位点之间的小片段取代为序列表的序列3所示的双链DNA分子得到的重组质粒。所述元件B为特异DNA分子B或含有所述特异DNA分子B的重组质粒B。所述特异DNA分子B通过同源重组将thrE基因全部或部分敲除。所述特异DNA分子B具体可为序列表的序列5所示的DNA分子。所述重组质粒B具体可为将pK18mobsacB载体Pst I和SmaI酶切位点之间的小片段取代为序列表的序列5所示的双链DNA分子得到的重组质粒。The realization method of silencing the thrG gene and thrE gene in the genome of the target bacterium can specifically be homologous recombination. The implementation of silencing the thrG gene and thrE gene in the genome of the target bacterium specifically includes the following steps: introducing element A and element B into the target bacterium (either at the same time or in steps), and then screening to obtain the thrG gene in the genome Recombinant bacteria with total or partial knockout and thrE gene knockout. The element A is a specific DNA molecule A or a recombinant plasmid A containing the specific DNA molecule A. The specific DNA molecule A knocks out all or part of the thrG gene through homologous recombination. The specific DNA molecule A may specifically be the DNA molecule shown in sequence 3 of the sequence listing. The recombinant plasmid A can specifically be a recombinant plasmid obtained by substituting the small fragment between the Sal I and EcoR I restriction sites of the pK18mobsacB vector with the double-stranded DNA molecule shown in sequence 3 of the sequence listing. The element B is a specific DNA molecule B or a recombinant plasmid B containing the specific DNA molecule B. The specific DNA molecule B knocks out all or part of the thrE gene through homologous recombination. The specific DNA molecule B may specifically be the DNA molecule shown in sequence 5 of the sequence listing. The recombinant plasmid B can specifically be a recombinant plasmid obtained by substituting the small fragment between the Pst I and SmaI restriction sites of the pK18mobsacB vector with the double-stranded DNA molecule shown in sequence 5 of the sequence listing.
所述目的菌可为细菌,具体可为谷氨酸棒杆菌,更具体可为谷氨酸棒杆菌RES167。The target bacteria can be bacteria, specifically Corynebacterium glutamicum, more specifically Corynebacterium glutamicum RES167.
本发明从谷氨酸棒杆菌RES167中发现一个新蛋白,命名为ThrG蛋白,具有转运L-苏氨酸的功能。thrG基因缺失的重组菌株转运L-苏氨酸的能力降低,表达thrG基因的重组菌转运L-苏氨酸的能力提高。将thrG基因导入产L-苏氨酸的出发菌株,可以显著增加发酵上清液中的L-苏氨酸产量。The present invention discovers a new protein named ThrG protein from Corynebacterium glutamicum RES167, which has the function of transporting L-threonine. The ability of the recombinant strain with thrG gene deletion to transport L-threonine is reduced, and the ability of the recombinant strain expressing thrG gene to transport L-threonine is improved. Introducing the thrG gene into the starting strain producing L-threonine can significantly increase the production of L-threonine in the fermentation supernatant.
本发明具有重大的应用价值。The invention has great application value.
附图说明Description of drawings
图1为实施例2的步骤二的电泳图。Fig. 1 is the electropherogram of step 2 of embodiment 2.
图2为实施例2的步骤四的电泳图。Fig. 2 is the electropherogram of step 4 of embodiment 2.
图3为实施例2的步骤五的电泳图。Fig. 3 is the electropherogram of step five of embodiment 2.
图4为实施例3的结果图。Fig. 4 is the result graph of embodiment 3.
具体实施方式Detailed ways
以下的实施例便于更好地理解本发明,但并不限定本发明。下述实施例中的实验方法,如无特殊说明,均为常规方法。下述实施例中所用的试验材料,如无特殊说明,均为自常规生化试剂商店购买得到的。以下实施例中的定量试验,均设置三次重复实验,结果取平均值。The following examples facilitate a better understanding of the present invention, but do not limit the present invention. The experimental methods in the following examples are conventional methods unless otherwise specified. The test materials used in the following examples, unless otherwise specified, were purchased from conventional biochemical reagent stores. Quantitative experiments in the following examples were all set up to repeat the experiments three times, and the results were averaged.
pMD19-T simple:宝生物工程(大连)有限公司,TAKARA Code:D104。pMD19-T simple: Takara Bioengineering (Dalian) Co., Ltd., TAKARA Code: D104.
pK18mobsacB载体:Schafer A et al.,Gene,145(1):69-73,1994。pK18mobsacB vector: Schafer A et al., Gene, 145(1):69-73, 1994.
pXMJ19载体:Jakoby M et al.,Biotechnology Techniques,13(6):437-441,1999。pXMJ19 vector: Jakoby M et al., Biotechnology Techniques, 13(6):437-441, 1999.
谷氨酸棒杆菌m-85(又称钝齿棒状杆菌m-85):微生物学报22:276-283,1982。Corynebacterium glutamicum m-85 (also known as Corynebacterium obtatus m-85): Acta Microbiology 22: 276-283, 1982.
实施例1、ThrG蛋白及其编码基因的发现Embodiment 1, the discovery of ThrG protein and its coding gene
经过大量序列分析、功能验证等预实验,从谷氨酸棒杆菌RES167中发现一个新蛋白,命名为ThrG蛋白。ThrG蛋白如序列表的序列1所示。After a large number of pre-experiments such as sequence analysis and functional verification, a new protein was found from Corynebacterium glutamicum RES167, named ThrG protein. The ThrG protein is shown in sequence 1 of the sequence listing.
将编码ThrG蛋白的基因命名为thrG基因,其编码框如序列表的序列2所示。The gene encoding the ThrG protein is named thrG gene, and its coding frame is shown in sequence 2 of the sequence listing.
实施例2、重组菌的构建Embodiment 2, the construction of recombinant bacteria
一、重组质粒pK18ΔthrG的构建1. Construction of recombinant plasmid pK18ΔthrG
1、提取谷氨酸棒杆菌RES167的基因组DNA。1. Genomic DNA of Corynebacterium glutamicum RES167 was extracted.
2、以步骤1得到的基因组DNA为模板,采用0143ZuFk和0143ZuRk组成的引物对进行PCR扩增,得到PCR扩增产物。2. Using the genomic DNA obtained in step 1 as a template, a primer pair composed of 0143ZuFk and 0143ZuRk is used for PCR amplification to obtain a PCR amplification product.
0143ZuFk:5’-CCTGTCGAC GATCTTGACGTTGGTAGT-3';0143ZuFk: 5'- CCTGTCGACGATCTTGACGTTGGTAGT -3';
0143ZuRk:5’-AGTGAGGGTGAGGAAGACAGGAATGAGAGACCAAGGAGGCTGGCTATGAT-3'。0143ZuRk: 5'-AGTGAGGGTGAGGAAGACAGGAATGAGAGACCAAGGAGGCTGGCTATGAT-3'.
3、以步骤1得到的基因组DNA为模板,采用0143dFk和0143dRk组成的引物对进行PCR扩增,得到PCR扩增产物。3. Using the genomic DNA obtained in step 1 as a template, a primer pair composed of 0143dFk and 0143dRk is used for PCR amplification to obtain a PCR amplification product.
0143dFk:5’-ATCATAGCCAGCCTCCTTGGTCTCTCATTCCTGTCTTCCTCACCCTCACT-3';0143dFk: 5'-ATCATAGCCAGCCTCCTTGGTCTCTCATTCCTGTCTTCCTCACCCTCACT-3';
0143dRk:5’-GTCGAAGAATTC GAGGTGGACAGGTCGAT-3'。0143dRk: 5'- GTCGAAGAATTCGAGGTGGACAGGTCGAT -3'.
4、将步骤2得到的PCR扩增产物和步骤3得到的PCR扩增产物混合后作为模板,采用0143ZuFk和0143dRk组成的引物对进行PCR扩增,得到PCR扩增产物。4. Mix the PCR amplification product obtained in step 2 and the PCR amplification product obtained in step 3 as a template, and perform PCR amplification with a primer pair composed of 0143ZuFk and 0143dRk to obtain a PCR amplification product.
5、将步骤4得到的PCR扩增产物进行测序。测序结果表明,PCR扩增产物中,Sal I酶切识别序列和EcoR I酶切识别序列之间为序列表的序列3所示的DNA分子。序列表的序列3中,第1-567位核苷酸为上游臂(其中第1-391位核苷酸为thrG基因编码框上游的391个核苷酸,第392-567位为thrG基因编码框中5’端的176个核苷酸),第581-1148位核苷酸为下游臂(其中第581-765位为thrG基因编码框中3’端的185个核苷酸,第766-1148位核苷酸为thrG基因编码框下游的383个核苷酸)。5. Sequencing the PCR amplification product obtained in step 4. Sequencing results show that in the PCR amplification product, the DNA molecule shown in sequence 3 in the sequence table is between the Sal I restriction recognition sequence and the EcoR I restriction recognition sequence. In sequence 3 of the sequence listing, the 1st-567th nucleotide is the upstream arm (the 1st-391st nucleotide is the 391 nucleotides upstream of the thrG gene coding frame, and the 392-567th is the thrG gene coding 176 nucleotides at the 5' end of the frame), 581-1148 nucleotides are downstream arms (581-765 are 185 nucleotides at the 3' end of the thrG gene coding frame, 766-1148 Nucleotides are 383 nucleotides downstream of the coding frame of thrG gene).
6、将步骤4得到的PCR扩增产物连接至克隆载体pMD19-T simple,得到重组质粒T-ΔthrGk。经测序,重组质粒T-ΔthrGk中,Sal I酶切识别序列和EcoR I酶切识别序列之间为序列表的序列3所示的DNA分子。6. Ligate the PCR amplification product obtained in step 4 to the cloning vector pMD19-T simple to obtain the recombinant plasmid T-ΔthrGk. After sequencing, in the recombinant plasmid T-ΔthrGk, between the Sal I restriction recognition sequence and the EcoR I restriction recognition sequence is a DNA molecule shown in sequence 3 in the sequence table.
实际操作用,也可以直接人工合成序列表的序列3所示的双链DNA分子,然后连接至克隆载体pMD19-T simple,得到所述重组质粒T-ΔthrGk。For practical operation, the double-stranded DNA molecule shown in Sequence 3 of the Sequence Listing can also be directly artificially synthesized, and then connected to the cloning vector pMD19-T simple to obtain the recombinant plasmid T-ΔthrGk.
7、取重组质粒T-ΔthrGk,用限制性内切酶Sal I和EcoR I进行双酶切,回收约1.1kb的片段。7. Take the recombinant plasmid T-ΔthrGk, perform double digestion with restriction endonucleases Sal I and EcoR I, and recover a fragment of about 1.1 kb.
8、取pK18mobsacB载体,用限制性内切酶Sal I和EcoR I进行双酶切,回收约5.6kb的载体骨架。8. Take the pK18mobsacB vector, perform double digestion with restriction endonucleases Sal I and EcoR I, and recover a vector skeleton of about 5.6 kb.
9、将步骤7得到的片段与步骤8得到的载体骨架连接,得到重组质粒pK18ΔthrG。根据测序结果,对重组质粒pK18ΔthrG进行结构描述如下:将pK18mobsacB载体Sal I和EcoR I酶切位点之间的小片段取代为了序列表的序列3所示的双链DNA分子。9. Ligate the fragment obtained in step 7 with the vector backbone obtained in step 8 to obtain the recombinant plasmid pK18ΔthrG. According to the sequencing results, the structure of the recombinant plasmid pK18ΔthrG is described as follows: the small fragment between the Sal I and EcoR I restriction sites of the pK18mobsacB vector was replaced with a double-stranded DNA molecule shown in sequence 3 in the sequence table.
二、重组菌RES167ΔthrG(thrG基因敲除菌)的构建2. Construction of recombinant bacteria RES167ΔthrG (thrG gene knockout bacteria)
序列表的序列3所示的DNA分子可以与谷氨酸棒杆菌RES167的基因组DNA中的thrG基因中的5’端区段和3’端区段发生同源重组,从而得到thrG基因部分缺失(缺失区段为序列表的序列2第177-496位核苷酸)的重组菌。The DNA molecule shown in sequence 3 of the sequence listing can undergo homologous recombination with the 5' end segment and the 3' end segment of the thrG gene in the genomic DNA of Corynebacterium glutamicum RES167, thereby obtaining the partial deletion of the thrG gene ( The deletion segment is the recombinant bacterium of nucleotides 177-496 of Sequence 2 in the sequence listing).
1、将重组质粒pK18ΔthrG电击转化谷氨酸棒杆菌RES167,转化液涂布于含10μg/mL卡那霉素的LB固体培养基平板,筛选具有卡那霉素抗性的转化子涂布于含20g/100mL蔗糖的LB固体培养基平板,挑取单菌落,获得纯培养的菌株。1. The recombinant plasmid pK18ΔthrG was electroporated to transform Corynebacterium glutamicum RES167, the transformation solution was spread on the LB solid medium plate containing 10 μg/mL kanamycin, and the transformant with kanamycin resistance was screened and spread on the plate containing 20g/100mL sucrose LB solid medium plate, pick a single colony to obtain a purely cultured strain.
2、取步骤1得到的菌株,分别点种到LB固体培养基平板和含50μg/mL卡那霉素的LB固体培养基平板,选择满足如下条件的菌株:在LB固体培养基平板上生长,但在含50μg/mL卡那霉素的LB固体培养基平板上不生长。2. Take the bacterial strains obtained in step 1, plant them on LB solid medium plates and LB solid medium plates containing 50 μg/mL kanamycin respectively, and select bacterial strains that meet the following conditions: grow on LB solid medium plates, But it does not grow on the LB solid medium plate containing 50μg/mL kanamycin.
3、取步骤2得到的菌株,采用0143ZuFk和0143dRk组成的引物对进行PCR扩增,然后将PCR扩增产物进行电泳,满足如下标准的菌株为thrG基因缺失的目标重组菌:PCR扩增产物约为1.1kb。3. Take the bacterial strain obtained in step 2, use the primer pair composed of 0143ZuFk and 0143dRk to carry out PCR amplification, and then perform electrophoresis on the PCR amplification product, and the bacterial strain that meets the following criteria is the target recombinant bacterium with thrG gene deletion: the PCR amplification product is about It is 1.1kb.
电泳结果见图1(自上而下,第一个箭头标注的条带约1.45kb,第二个箭头标注的条带约1.1kb)。图1中,泳道1为谷氨酸棒杆菌RES167进行步骤3的PCR扩增产物,泳道2为步骤2得到的菌株的PCR扩增产物。结果表明,得到了thrG基因缺失的目标重组菌,将其命名为重组菌RES167ΔthrG。The results of electrophoresis are shown in Figure 1 (from top to bottom, the band marked by the first arrow is about 1.45 kb, and the band marked by the second arrow is about 1.1 kb). In FIG. 1 , lane 1 is the PCR amplification product of Corynebacterium glutamicum RES167 in step 3, and lane 2 is the PCR amplification product of the strain obtained in step 2. The results showed that the target recombinant strain with thrG gene deletion was obtained, and it was named recombinant strain RES167ΔthrG.
三、重组质粒pK18ΔthrE的构建3. Construction of recombinant plasmid pK18ΔthrE
在谷氨酸棒杆菌中已经报道了一个与苏氨酸外运相关的蛋白-ThrE蛋白。编码ThrE蛋白的基因即thrE基因,其编码框如序列表的序列4所示。为避免由于thrE基因的存在对ThrG蛋白的功能鉴定发生干扰,需要将谷氨酸棒杆菌RES167中的thrE基因沉默。A protein-ThrE protein related to threonine export has been reported in Corynebacterium glutamicum. The gene encoding the ThrE protein is the thrE gene, and its coding frame is shown in sequence 4 of the sequence listing. In order to avoid interference with the function identification of ThrG protein due to the presence of thrE gene, it is necessary to silence the thrE gene in Corynebacterium glutamicum RES167.
1、提取谷氨酸棒杆菌RES167的基因组DNA。1. Genomic DNA of Corynebacterium glutamicum RES167 was extracted.
2、以步骤1得到的基因组DNA为模板,采用2533uFk和2533uRk组成的引物对进行PCR扩增,得到PCR扩增产物。2. Using the genomic DNA obtained in step 1 as a template, a primer pair consisting of 2533uFk and 2533uRk is used for PCR amplification to obtain a PCR amplification product.
2533uFk:5’-GAGCTGCAG AAGGAATATCCCGGAGAACCG-3';2533uFk: 5'-GAG CTGCAG AAGGAATATCCCGGAGAACCG-3';
2533uRk:5’-AGACGCCTAAGCAGGTTGATTTCCGCTGGAAAACATTTTGCAAG-3'。2533uRk: 5'-AGACGCCTAAGCAGGTTGATTTCCGCTGGAAAACATTTTGCAAG-3'.
3、以步骤1得到的基因组DNA为模板,采用2533dFk和2533dRk组成的引物对进行PCR扩增,得到PCR扩增产物。3. Using the genomic DNA obtained in step 1 as a template, a primer pair consisting of 2533dFk and 2533dRk is used for PCR amplification to obtain a PCR amplification product.
2533dFk:5’-CTTGCAAAATGTTTTCCAGCGGAAATCAACCTGCTTAGGCGTCT-3';2533dFk: 5'-CTTGCAAAATGTTTTTCCAGCGGAAATCAACCTGCTTAGGCGTCT-3';
2533dRk:5’-TGTCCCGGG CGTTGCGTTTGAAAAGCCCT-3'。2533dRk: 5'-TGT CCCGGG CGTTGCGTTTGAAAAGCCCT-3'.
4、将步骤2得到的PCR扩增产物和步骤3得到的PCR扩增产物混合后作为模板,采用2533uFk和2533dRk组成的引物对进行PCR扩增,得到PCR扩增产物。4. Mix the PCR amplification product obtained in step 2 and the PCR amplification product obtained in step 3 as a template, and perform PCR amplification with a primer pair composed of 2533uFk and 2533dRk to obtain a PCR amplification product.
5、将步骤4得到的PCR扩增产物进行测序。测序结果表明,PCR扩增产物中,Pst I酶切识别序列和Sma I酶切识别序列之间为序列表的序列5所示的DNA分子。序列表的序列5中,第1-700位核苷酸为上游臂(thrE基因编码框上游的700个核苷酸),第701-1400位核苷酸为下游臂(thrE基因编码框下游的700个核苷酸)。5. Sequencing the PCR amplification product obtained in step 4. Sequencing results show that in the PCR amplification product, the DNA molecule shown in sequence 5 in the sequence table is between the Pst I restriction recognition sequence and the Sma I restriction recognition sequence. In sequence 5 of the sequence listing, the 1st-700th nucleotide is the upstream arm (the 700 nucleotides upstream of the thrE gene coding frame), and the 701-1400th nucleotide is the downstream arm (the 700 nucleotides upstream of the thrE gene coding frame downstream). 700 nucleotides).
6、将步骤4得到的PCR扩增产物连接至克隆载体pMD19-T s imple,得到重组质粒T-ΔthrE。经测序,重组质粒T-ΔthrE中,Pst I酶切识别序列和Sma I酶切识别序列之间为序列表的序列5所示的DNA分子。6. Ligate the PCR amplification product obtained in step 4 to the cloning vector pMD19-T simple to obtain the recombinant plasmid T-ΔthrE. After sequencing, in the recombinant plasmid T-ΔthrE, the DNA molecule shown in sequence 5 in the sequence table is between the Pst I restriction recognition sequence and the Sma I restriction recognition sequence.
实际操作用,也可以直接人工合成序列表的序列5所示的双链DNA分子,然后连接至克隆载体pMD19-T simple,得到所述重组质粒T-ΔthrE。For practical operation, the double-stranded DNA molecule shown in Sequence 5 of the Sequence Listing can also be directly artificially synthesized, and then connected to the cloning vector pMD19-T simple to obtain the recombinant plasmid T-ΔthrE.
7、取重组质粒T-ΔthrE,用限制性内切酶Pst I和Sma I进行双酶切,回收约1.4kb的片段。7. Take the recombinant plasmid T-ΔthrE, perform double digestion with restriction endonucleases Pst I and Sma I, and recover a fragment of about 1.4 kb.
8、取pK18mobsacB载体,用限制性内切酶Pst I和Sma I进行双酶切,回收约5.6kb的载体骨架。8. Take the pK18mobsacB vector, perform double digestion with restriction endonucleases Pst I and Sma I, and recover the vector skeleton of about 5.6 kb.
9、将步骤7得到的片段与步骤8得到的载体骨架连接,得到重组质粒pK18ΔthrE。根据测序结果,对重组质粒pK18ΔthrE进行结构描述如下:将pK18mobsacB载体Pst I和SmaI酶切位点之间的小片段取代为了序列表的序列5所示的双链DNA分子。9. Ligate the fragment obtained in step 7 with the vector backbone obtained in step 8 to obtain the recombinant plasmid pK18ΔthrE. According to the sequencing results, the structure of the recombinant plasmid pK18ΔthrE is described as follows: the small fragment between the Pst I and SmaI restriction sites of the pK18mobsacB vector was replaced by the double-stranded DNA molecule shown in sequence 5 of the sequence table.
四、重组菌RES167ΔthrE(thrE基因敲除菌)的构建4. Construction of recombinant bacteria RES167ΔthrE (thrE gene knockout bacteria)
序列表的序列5所示的DNA分子可以与谷氨酸棒杆菌RES167的基因组DNA中的thrE基因的上游片段和下游片段发生同源重组,从而得到thrE基因缺失(缺失区段为序列表的序列4所示核苷酸)的重组菌。The DNA molecule shown in sequence 5 of the sequence listing can be homologously recombined with the upstream and downstream fragments of the thrE gene in the genomic DNA of Corynebacterium glutamicum RES167, thereby obtaining the deletion of the thrE gene (the missing segment is the sequence of the sequence listing Nucleotide shown in 4) recombinant bacteria.
1、将重组质粒pK18ΔthrE电击转化谷氨酸棒杆菌RES167,转化液涂布于含10μg/mL卡那霉素的LB固体培养基平板,筛选具有卡那霉素抗性的转化子涂布于含20g/100mL蔗糖的LB固体培养基平板,挑取单菌落,获得纯培养的菌株。1. The recombinant plasmid pK18ΔthrE was electroporated to transform Corynebacterium glutamicum RES167, the transformation liquid was spread on the LB solid medium plate containing 10 μg/mL kanamycin, and the transformant with kanamycin resistance was screened and spread on the plate containing 20g/100mL sucrose LB solid medium plate, pick a single colony to obtain a purely cultured strain.
2、取步骤1得到的菌株,分别点种到LB固体培养基平板和含50μg/mL卡那霉素的LB固体培养基平板,选择满足如下条件的菌株:在LB固体培养基平板上生长,但在含50μg/mL卡那霉素的LB固体培养基平板上不生长。2. Take the bacterial strains obtained in step 1, plant them on LB solid medium plates and LB solid medium plates containing 50 μg/mL kanamycin respectively, and select bacterial strains that meet the following conditions: grow on LB solid medium plates, But it does not grow on the LB solid medium plate containing 50μg/mL kanamycin.
3、取步骤2得到的菌株,采用2533uFk和2533dRk组成的引物对进行PCR扩增,然后将PCR扩增产物进行电泳,满足如下标准的菌株为thrE基因缺失的目标重组菌:PCR扩增产物约为1.4kb。3. Take the bacterial strain obtained in step 2, use the primer pair composed of 2533uFk and 2533dRk to carry out PCR amplification, and then perform electrophoresis on the PCR amplification product, and the bacterial strain that meets the following criteria is the target recombinant bacterium with thrE gene deletion: the PCR amplification product is about 1.4kb.
电泳结果见图2(自上而下,第一个箭头标注的条带约2.9kb,第二个箭头标注的条带约1.4kb)。图2中,泳道1为谷氨酸棒杆菌RES167进行步骤3的PCR扩增产物,泳道2为步骤2得到的菌株的PCR扩增产物。结果表明,得到了thrE基因缺失的目标重组菌,将其命名为重组菌RES167ΔthrE。The electrophoresis results are shown in Figure 2 (from top to bottom, the band marked by the first arrow is about 2.9 kb, and the band marked by the second arrow is about 1.4 kb). In FIG. 2 , lane 1 is the PCR amplification product of Corynebacterium glutamicum RES167 in step 3, and lane 2 is the PCR amplification product of the strain obtained in step 2. The results showed that the target recombinant strain with deletion of thrE gene was obtained, which was named recombinant strain RES167ΔthrE.
五、重组菌RES167ΔthrGΔthrE(thrG基因和thrE基因双敲除菌)的构建5. Construction of recombinant bacteria RES167ΔthrGΔthrE (thrG gene and thrE gene double knockout bacteria)
1、将重组质粒pK18ΔthrE电击转化重组菌RES167ΔthrG,转化液涂布于含10μg/mL卡那霉素的LB固体培养基平板,筛选具有卡那霉素抗性的转化子涂布于含20g/100mL蔗糖的LB固体培养基平板,挑取单菌落,获得纯培养的菌株。1. The recombinant plasmid pK18ΔthrE was electroporated to transform the recombinant strain RES167ΔthrG, the transformation solution was spread on the LB solid medium plate containing 10 μg/mL kanamycin, and the transformants with kanamycin resistance were screened and spread on the plate containing 20 g/100mL kanamycin. Sucrose LB solid medium plate, pick a single colony to obtain a purely cultured strain.
2、取步骤1得到的菌株,分别点种到LB固体培养基平板和含50μg/mL卡那霉素的LB固体培养基平板,选择满足如下条件的菌株:在LB固体培养基平板上生长,但在含50μg/mL卡那霉素的LB固体培养基平板上不生长。2. Take the bacterial strains obtained in step 1, plant them on LB solid medium plates and LB solid medium plates containing 50 μg/mL kanamycin respectively, and select bacterial strains that meet the following conditions: grow on LB solid medium plates, But it does not grow on the LB solid medium plate containing 50μg/mL kanamycin.
3、取步骤2得到的菌株,采用0143ZuFk和0143dRk组成的引物对或2533uFk和2533dRk组成的引物对进行PCR扩增,然后将PCR扩增产物进行电泳,满足如下标准的菌株为thrG基因和thrE基因双缺失的目标重组菌:采用0143ZuFk和0143dRk组成的引物对时的PCR扩增产物约为1.1kb,且,采用2533uFk和2533dRk组成的引物对时的PCR扩增产物约为1.4kb。3. Take the strain obtained in step 2, use the primer pair composed of 0143ZuFk and 0143dRk or the primer pair composed of 2533uFk and 2533dRk to carry out PCR amplification, and then perform electrophoresis on the PCR amplification product. The strains that meet the following criteria are thrG gene and thrE gene Target recombinant bacteria with double deletion: the PCR amplification product when using the primer pair consisting of 0143ZuFk and 0143dRk is about 1.1kb, and the PCR amplification product when using the primer pair consisting of 2533uFk and 2533dRk is about 1.4kb.
电泳结果见图3(自上而下,第一个箭头标注的条带约2.9kb,第二个箭头标注的条带约1.45kb,第三个箭头标注的条带约1.4kb,第四个箭头标注的条带约1.1kb)。图3中,泳道1为谷氨酸棒杆菌RES167采用0143ZuFk和0143dRk组成的引物对时的PCR扩增产物,泳道2为步骤2得到的菌株采用0143ZuFk和0143dRk组成的引物对时的PCR扩增产物,泳道3为谷氨酸棒杆菌RES167采用2533uFk和2533dRk组成的引物对时的PCR扩增产物,泳道4为步骤2得到的菌株采用2533uFk和2533dRk组成的引物对时的PCR扩增产物。The electrophoresis results are shown in Figure 3 (from top to bottom, the band marked by the first arrow is about 2.9kb, the band marked by the second arrow is about 1.45kb, the band marked by the third arrow is about 1.4kb, and the band marked by the fourth arrow is about 1.4kb. The band marked by the arrow is about 1.1 kb). In Fig. 3, swimming lane 1 is the PCR amplification product when Corynebacterium glutamicum RES167 adopts the primer pair consisting of 0143ZuFk and 0143dRk, and swimming lane 2 is the PCR amplification product when the strain obtained in step 2 adopts the primer pair consisting of 0143ZuFk and 0143dRk , Lane 3 is the PCR amplification product when Corynebacterium glutamicum RES167 adopts the primer pair consisting of 2533uFk and 2533dRk, and swimming lane 4 is the PCR amplification product when the strain obtained in step 2 adopts the primer pair consisting of 2533uFk and 2533dRk.
结果表明,得到了thrG基因和thrE基因双缺失的目标重组菌,将其命名为重组菌RES167ΔthrGΔthrE。The results showed that the target recombinant strain with double deletion of thrG gene and thrE gene was obtained, which was named recombinant strain RES167ΔthrGΔthrE.
六、重组质粒pZZT1的构建6. Construction of recombinant plasmid pZZT1
1、提取谷氨酸棒杆菌RES167的基因组DNA。1. Genomic DNA of Corynebacterium glutamicum RES167 was extracted.
2、以步骤1得到的基因组DNA为模板,采用0143F和0143R组成的引物对进行PCR扩增,得到PCR扩增产物。2. Using the genomic DNA obtained in step 1 as a template, perform PCR amplification with a primer pair composed of 0143F and 0143R to obtain a PCR amplification product.
0143F:5’-GCCTCTAGAAAGGAGGACAACC ATGACAACAGCACAGTTTCT-3';0143F: 5'-GCC TCTAGA AAGGAGGACAACC ATGACAACAGCACAGTTCT-3';
0143R:5’-CGTGGTACCTTA TTAACCCACTACCCTGCCA-3'。0143R: 5'-CGT GGTACC TTA TTAACCCACTACCCTGCCA-3'.
3、将步骤2得到的PCR扩增产物连接至克隆载体pMD19-T simple,得到重组质粒T-thrG。经测序,重组质粒T-thrG中,XbaI酶切识别序列和Kpn I酶切识别序列之间为序列表的序列6所示的DNA分子。3. Ligate the PCR amplification product obtained in step 2 to the cloning vector pMD19-T simple to obtain the recombinant plasmid T-thrG. After sequencing, in the recombinant plasmid T-thrG, the DNA molecule shown in sequence 6 in the sequence table is between the XbaI restriction recognition sequence and the KpnI restriction recognition sequence.
实际操作用,也可以直接人工合成序列表的序列6所示的双链DNA分子,然后连接至克隆载体pMD19-T simple,得到所述重组质粒T-thrG。For practical operation, the double-stranded DNA molecule shown in sequence 6 of the sequence listing can also be directly artificially synthesized, and then connected to the cloning vector pMD19-T simple to obtain the recombinant plasmid T-thrG.
4、取重组质粒T-thrG,用限制性内切酶XbaI和Kpn I进行双酶切,回收约0.7kb的片段。4. Take the recombinant plasmid T-thrG, perform double digestion with restriction endonucleases XbaI and KpnI, and recover a fragment of about 0.7kb.
5、取pXMJ19载体,用限制性内切酶XbaI和Kpn I进行双酶切,回收约6.6kb的载体骨架。5. Take the pXMJ19 vector, perform double digestion with restriction endonucleases XbaI and KpnI, and recover the vector skeleton of about 6.6kb.
6、将步骤4得到的片段与步骤5得到的载体骨架连接,得到重组质粒pZZT1。根据测序结果,对重组质粒pZZT1进行结构描述如下:将pXMJ19载体XbaI和Kpn I酶切位点之间的小片段取代为了序列表的序列6所示的双链DNA分子。序列表的序列6中,第14-694位核苷酸编码ThrG蛋白。6. Ligate the fragment obtained in step 4 with the vector backbone obtained in step 5 to obtain recombinant plasmid pZZT1. According to the sequencing results, the structure of the recombinant plasmid pZZT1 is described as follows: the small fragment between the XbaI and KpnI restriction sites of the pXMJ19 vector was replaced with a double-stranded DNA molecule shown in sequence 6 of the sequence table. In sequence 6 of the sequence listing, nucleotides 14-694 encode ThrG protein.
七、重组菌RES167ΔthrGΔthrE/pZZT1的构建7. Construction of recombinant bacteria RES167ΔthrGΔthrE/pZZT1
将重组质粒pZZT1导入重组菌RES167ΔthrGΔthrE,得到的重组菌命名为重组菌RES167ΔthrGΔthrE/pZZT1。The recombinant plasmid pZZT1 was introduced into the recombinant strain RES167ΔthrGΔthrE, and the obtained recombinant strain was named recombinant strain RES167ΔthrGΔthrE/pZZT1.
八、重组菌m-85/pZZT1的构建8. Construction of recombinant bacteria m-85/pZZT1
将重组质粒pZZT1导入谷氨酸棒杆菌m-85,得到的重组菌命名为重组菌m-85/pZZT1。The recombinant plasmid pZZT1 was introduced into Corynebacterium glutamicum m-85, and the obtained recombinant strain was named recombinant strain m-85/pZZT1.
九、重组菌m-85/pXMJ19的构建9. Construction of recombinant bacteria m-85/pXMJ19
将pXMJ19载体导入谷氨酸棒杆菌m-85,得到的重组菌命名为重组菌m-85/pXMJ19。The pXMJ19 vector was introduced into Corynebacterium glutamicum m-85, and the resulting recombinant strain was named recombinant strain m-85/pXMJ19.
实施例3、HPLC法测定ThrG蛋白作为L-苏氨酸转运蛋白的活力Embodiment 3, HPLC method assays the activity of ThrG protein as L-threonine transporter
试验菌株分别为:谷氨酸棒杆菌RES167、重组菌RES167ΔthrG、重组菌RES167ΔthrE、重组菌RES167ΔthrGΔthrE或重组菌RES167ΔthrGΔthrE/pZZT1。The test strains were: Corynebacterium glutamicum RES167, recombinant RES167ΔthrG, recombinant RES167ΔthrE, recombinant RES167ΔthrGΔthrE or recombinant RES167ΔthrGΔthrE/pZZT1.
培养基甲:在MMI培养基中加入葡萄糖,使葡萄糖的浓度为20mM。Medium A: Glucose was added to the MMI medium so that the concentration of glucose was 20 mM.
培养基乙:在MMI培养基中加入苏氨酸三肽(苏氨酸三肽由连续三个苏氨酸残基组成)和葡萄糖,使苏氨酸三肽的浓度为1mM,葡萄糖的浓度为20mM。Medium B: Add threonine tripeptide (threonine tripeptide consists of three consecutive threonine residues) and glucose to MMI medium, so that the concentration of threonine tripeptide is 1 mM, and the concentration of glucose is 20mM.
MMI培养基(pH7.5):Na2HPO4·12H2O 2.0g、KH2PO4 0.5g、MgSO4·7H2O 0.03g、微量元素溶液2mL、生物素50μg、硫胺素50μg,用水定容至1L。MMI medium (pH7.5): Na 2 HPO 4 12H 2 O 2.0g, KH 2 PO 4 0.5g, MgSO 4 7H 2 O 0.03g, trace element solution 2mL, biotin 50μg, thiamine 50μg, Make up to 1L with water.
微量元素溶液(pH6.0):EDTA 0.500g、ZnSO4·7H2O 0.220g、CaC12 0.055g、MnCl2·4H2O0.051g、FeSO4·7H2O 0.0499g、(NH4)6MO7O24·4H2O 0.011g、CuSO4·5H2O0.0157g、CoCl2·6H2O0.0161g,H2O 1000m1。Trace element solution (pH6.0): EDTA 0.500g, ZnSO 4 7H 2 O 0.220g, CaCl 2 0.055g, MnCl 2 4H 2 O 0.051g, FeSO 4 7H 2 O 0.0499g, (NH 4 ) 6 MO 7 O 24 ·4H 2 O 0.011g, CuSO 4 ·5H 2 O 0.0157g, CoCl 2 ·6H 2 O 0.0161g, H 2 O 1000m1.
1、将试验菌株接种至LB液体培养基,培养至细胞生长到指数期,离心收集细胞。1. Inoculate the test strain into LB liquid medium, culture until the cells grow to the exponential phase, and collect the cells by centrifugation.
2、取步骤1得到的细胞,用培养基甲洗涤两次,然后悬浮于培养基乙中,得到OD600nm值为7-8.5的悬浮液。OD600nm值为7-8.5的悬浮液,相当于细胞干重1.5mg/mL-1.8mg/mL。2. Take the cells obtained in step 1, wash them twice with medium A, and then suspend them in medium B to obtain a suspension with an OD600nm value of 7-8.5. Suspension with OD 600nm value of 7-8.5, equivalent to 1.5mg/mL-1.8mg/mL dry cell weight.
3、取步骤2的悬浮液,30℃、150rpm振荡反应,分别于不同反应时间取样,立即进行离心(4℃、12000rpm、3min),收集上清液。3. Take the suspension in step 2, shake it at 30°C and 150rpm, take samples at different reaction times, and immediately centrifuge (4°C, 12000rpm, 3min) to collect the supernatant.
4、取步骤3得到的上清液,用0.45μm滤膜过滤,收集滤液。4. Take the supernatant obtained in step 3, filter it with a 0.45 μm filter membrane, and collect the filtrate.
5、取步骤4得到的滤液,进行HPLC。5. Take the filtrate obtained in step 4 and perform HPLC.
HPLC相关参数如下:HPLC related parameters are as follows:
Agilent 1200型HPLC仪;Agilent 1200 HPLC instrument;
Agilent Zorbax Eclipse-AAA色谱柱,4.6×75mm,3.5μm,OPA法自动柱前衍生;Agilent Zorbax Eclipse-AAA chromatographic column, 4.6×75mm, 3.5μm, automatic pre-column derivatization by OPA method;
流动相由溶液A和溶液B组成,流动相的流速为2mL/min;溶液A为40mM磷酸二氢钠水溶液(pH 7.8),流动相B由45体积份乙腈、45体积份甲醇和10体积份水组成。洗脱过程参照安捷伦公司操作指南进行。Mobile phase is made up of solution A and solution B, and the flow rate of mobile phase is 2mL/min; Solution A is 40mM sodium dihydrogen phosphate aqueous solution (pH 7.8), and mobile phase B is made up of 45 volume parts acetonitrile, 45 volume parts methanol and 10 volume parts water composition. The elution process was carried out according to the operating instructions of Agilent Corporation.
L-苏氨酸标准品(纯度>99.0%):北京鼎国生物技术有限公司。L-threonine standard substance (purity>99.0%): Beijing Dingguo Biotechnology Co., Ltd.
标准品的保留时间为6.63min,滤液上样后在相同保留时间出峰,证明步骤3得到的上清液中含有L-苏氨酸。根据标准品制作标准曲线,通过标准曲线和峰面积计算不同取样时间收集的上清液中的L-苏氨酸含量。The retention time of the standard was 6.63min, and the peak appeared at the same retention time after loading the filtrate, which proved that the supernatant obtained in step 3 contained L-threonine. A standard curve was made according to the standard, and the L-threonine content in the supernatant collected at different sampling times was calculated by the standard curve and peak area.
细胞外运L-苏氨酸的活力为每毫克细胞干重分泌L-苏氨酸的微摩尔数。The activity of extracellular transport of L-threonine is the number of micromoles of L-threonine secreted per mg of dry weight of cells.
细胞外运L-苏氨酸的活力的结果见图4。图4中,◆代表谷氨酸棒杆菌RES167、□代表重组菌RES167ΔthrG、△代表重组菌RES167ΔthrE、▼代表重组菌RES167ΔthrGΔthrE、▲代表重组菌RES167ΔthrGΔthrE/pZZT1。The results of the activity of extracellular L-threonine transport are shown in Fig. 4 . In Figure 4, ◆ represents Corynebacterium glutamicum RES167, □ represents recombinant RES167ΔthrG, △ represents recombinant RES167ΔthrE, ▼ represents recombinant RES167ΔthrGΔthrE, ▲ represents recombinant RES167ΔthrGΔthrE/pZZT1.
结果表明:与谷氨酸棒杆菌RES167相比,重组菌RES167ΔthrG分泌L-苏氨酸的活力降低,提示ThrG蛋白可能与L-苏氨酸的外运相关;与重组菌RES167ΔthrGΔthrE相比,重组菌RES167ΔthrGΔthrE/pZZT1分泌L-苏氨酸的活力大幅升高。结果表明,ThrG蛋白具有外运L-苏氨酸的功能。The results showed that: compared with Corynebacterium glutamicum RES167, the activity of the recombinant strain RES167ΔthrG to secrete L-threonine decreased, suggesting that the ThrG protein may be related to the export of L-threonine; compared with the recombinant strain RES167ΔthrGΔthrE, the recombinant strain RES167ΔthrGΔthrE/pZZT1 significantly increased the activity of secreting L-threonine. The results showed that ThrG protein has the function of exporting L-threonine.
实施例4、利用重组菌m-85/pZZT1制备L-苏氨酸Example 4. Preparation of L-threonine by recombinant bacteria m-85/pZZT1
试验菌株分别为:重组菌m-85/pZZT1或重组菌m-85/pXMJ19。The test strains were: recombinant strain m-85/pZZT1 or recombinant strain m-85/pXMJ19.
种子培养基:蛋白胨10g、酵母粉5g、氯化钠10g、葡萄糖10g、尿素2g,用水定容至1L。Seed medium: peptone 10g, yeast powder 5g, sodium chloride 10g, glucose 10g, urea 2g, dilute to 1L with water.
发酵培养基(pH7.0):葡萄糖80g、(NH4)2SO4 20g、KH2PO4 1.5g、MgSO4·7H2O 0.4g、MnCl2·4H2O 10mg、FeSO4·7H2O 10mg、生物素50μg、硫胺素200μg、L-甲硫氨酸37.5mg、CaCO320g,用水定容至1L。Fermentation medium (pH7.0): Glucose 80g, (NH 4 ) 2 SO 4 20g, KH 2 PO 4 1.5g, MgSO 4 7H 2 O 0.4g, MnCl 2 4H 2 O 10mg, FeSO 4 7H 2 O 10mg, biotin 50μg, thiamine 200μg, L-methionine 37.5mg, CaCO 3 20g, dilute to 1L with water.
1、将试验菌株接种至种子培养基,30℃、300rpm振荡培养16小时,得到种子液。1. Inoculate the test strain into the seed medium, shake and cultivate at 30°C and 300rpm for 16 hours to obtain the seed liquid.
2、取1.5mL种子液,接种至15mL发酵培养基,30℃、300rpm振荡培养72小时。2. Take 1.5mL of seed liquid, inoculate into 15mL of fermentation medium, and culture with shaking at 30°C and 300rpm for 72 hours.
3、完成步骤2后,4℃、8000rpm离心3min,收集上清液。3. After completing step 2, centrifuge at 4°C, 8000rpm for 3min, and collect the supernatant.
4、取步骤3得到的上清液,用无菌水适当稀释,然后用0.45μm滤膜过滤,收集滤液。4. Take the supernatant obtained in step 3, dilute it appropriately with sterile water, then filter it with a 0.45 μm filter membrane, and collect the filtrate.
5、取步骤4得到的滤液,进行HPLC。5. Take the filtrate obtained in step 4 and perform HPLC.
HPLC相关参数同实施例3的步骤5。HPLC related parameters are the same as step 5 of embodiment 3.
重组菌m-85/pZZT1作为试验菌株,完成步骤2的体系中的L-苏氨酸浓度为3.54g/L。重组菌m-85/pXMJ19作为试验菌株,完成步骤2的体系中的L-苏氨酸浓度为1.73g/L。The recombinant bacterium m-85/pZZT1 was used as the test strain, and the concentration of L-threonine in the system after step 2 was 3.54 g/L. The recombinant strain m-85/pXMJ19 was used as the test strain, and the concentration of L-threonine in the system after step 2 was 1.73 g/L.
SEQUENCE LISTING SEQUENCE LISTING
<110> 中国科学院微生物研究所<110> Institute of Microbiology, Chinese Academy of Sciences
<120> L-苏氨酸转运蛋白ThrG及其编码基因与应用<120> L-threonine transporter ThrG and its coding gene and application
<130> GNCYX170191<130> GNCYX170191
<160> 6<160> 6
<170> PatentIn version 3.5<170> PatentIn version 3.5
<210> 1<210> 1
<211> 226<211> 226
<212> PRT<212> PRT
<213> 谷氨酸棒杆菌(C. glutamicum)<213> Corynebacterium glutamicum (C. glutamicum)
<400> 1<400> 1
Met Thr Thr Ala Gln Phe Leu Ala Leu Phe Leu Val Trp Ile Ala AlaMet Thr Thr Ala Gln Phe Leu Ala Leu Phe Leu Val Trp Ile Ala Ala
1 5 10 151 5 10 15
Ile Ala Ser Pro Gly Pro Asp Leu Phe Gln Ile Ile Arg Leu Ser AlaIle Ala Ser Pro Gly Pro Asp Leu Phe Gln Ile Ile Arg Leu Ser Ala
20 25 30 20 25 30
Lys Asn Arg Arg Asp Gly Val Leu Thr Ala Val Gly Ile Met Val GlyLys Asn Arg Arg Asp Gly Val Leu Thr Ala Val Gly Ile Met Val Gly
35 40 45 35 40 45
Asn Ser Ile Trp Ile Ile Ala Ser Leu Leu Gly Leu Ser Ala Leu IleAsn Ser Ile Trp Ile Ile Ala Ser Leu Leu Gly Leu Ser Ala Leu Ile
50 55 60 50 55 60
Ser Thr Tyr Pro Ala Ile Leu Asn Leu Leu Gln Leu Val Gly Gly GlySer Thr Tyr Pro Ala Ile Leu Asn Leu Leu Gln Leu Val Gly Gly Gly
65 70 75 8065 70 75 80
Tyr Leu Thr Trp Met Gly Ile Gly Ala Val Arg Ser Trp Trp Thr LysTyr Leu Thr Trp Met Gly Ile Gly Ala Val Arg Ser Trp Trp Thr Lys
85 90 95 85 90 95
Arg Ser Thr Gln Gln Ala Ala Ala Asp Ser Gln Ala Val Glu Asn ThrArg Ser Thr Gln Gln Ala Ala Ala Asp Ser Gln Ala Val Glu Asn Thr
100 105 110 100 105 110
Leu Val Thr Ala Thr Ala Ala Ser Val Gly Val Trp Pro Ala Ile ArgLeu Val Thr Ala Thr Ala Ala Ser Val Gly Val Trp Pro Ala Ile Arg
115 120 125 115 120 125
Ser Gly Ile Ala Thr Asn Leu Ser Asn Pro Lys Ala Val Leu Phe PheSer Gly Ile Ala Thr Asn Leu Ser Asn Pro Lys Ala Val Leu Phe Phe
130 135 140 130 135 140
Gly Ser Val Phe Ala Gln Phe Val Arg Pro Asp Met Gly Ile Gly TrpGly Ser Val Phe Ala Gln Phe Val Arg Pro Asp Met Gly Ile Gly Trp
145 150 155 160145 150 155 160
Ser Ile Phe Ile Gly Val Phe Leu Thr Leu Thr Gly Leu Leu Trp PheSer Ile Phe Ile Gly Val Phe Leu Thr Leu Thr Gly Leu Leu Trp Phe
165 170 175 165 170 175
Val Gly Phe Ala Val Leu Val Arg Lys Leu Ala Ala Gly Leu Thr ArgVal Gly Phe Ala Val Leu Val Arg Lys Leu Ala Ala Gly Leu Thr Arg
180 185 190 180 185 190
Asn Gly Ala Ile Ile Asp Leu Leu Thr Gly Val Ile Phe Ile Gly LeuAsn Gly Ala Ile Ile Asp Leu Leu Thr Gly Val Ile Phe Ile Gly Leu
195 200 205 195 200 205
Gly Met Phe Met Ile Phe Glu Gly Val Val Gly Ile Gly Gly Arg ValGly Met Phe Met Ile Phe Glu Gly Val Val Gly Ile Gly Gly Arg Val
210 215 220 210 215 220
Val GlyVal Gly
225225
<210> 2<210> 2
<211> 681<211> 681
<212> DNA<212>DNA
<213> 谷氨酸棒杆菌(C. glutamicum)<213> Corynebacterium glutamicum (C. glutamicum)
<400> 2<400> 2
atgacaacag cacagtttct agcgcttttt ctggtgtgga tcgcagcaat tgcatcccct 60atgacaacag cacagtttct agcgcttttt ctggtgtgga tcgcagcaat tgcatcccct 60
gggccagacc ttttccagat catcaggcta agtgccaaaa accgccgtga tggcgtactg 120gggccagacc ttttccagat catcaggcta agtgccaaaa accgccgtga tggcgtactg 120
actgccgtag gcatcatggt gggaaactcc atctggatca tagccagcct ccttgggctc 180actgccgtag gcatcatggt gggaaactcc atctggatca tagccagcct ccttgggctc 180
tcggcactga tctccacgta tccagcaatt ttgaacctgt tgcagctcgt cggtggcggt 240tcggcactga tctccacgta tccagcaatt ttgaacctgt tgcagctcgt cggtggcggt 240
tatttgacct ggatgggcat cggggcggtg aggtcatggt ggacgaaacg ctccacacag 300tatttgacct ggatgggcat cggggcggtg aggtcatggt ggacgaaacg ctccacacag 300
caagctgcag cggattctca agctgtagag aatacgttgg tgacagccac ggctgcatct 360caagctgcag cggattctca agctgtagag aatacgttgg tgacagccac ggctgcatct 360
gtcggagtgt ggccagctat tcgatctggc attgctacca acttgtccaa ccccaaagct 420gtcggagtgt ggccagctat tcgatctggc attgctacca acttgtccaa ccccaaagct 420
gtgctgtttt ttggttccgt tttcgcccaa tttgttagac ctgacatggg aatcgggtgg 480gtgctgtttt ttggttccgt tttcgcccaa tttgttagac ctgacatggg aatcgggtgg 480
agtattttca ttggagtctt cctcaccctc actggcctgc tgtggtttgt ggggttcgcc 540agtattttca ttggagtctt cctcaccctc actggcctgc tgtggtttgt ggggttcgcc 540
gtcttggtcc gcaaactagc cgctggcctc acccgaaatg gagccatcat cgacctgcta 600gtcttggtcc gcaaactagc cgctggcctc acccgaaatg gagccatcat cgacctgcta 600
acgggggtga ttttcatcgg gctgggaatg ttcatgatct tcgagggggt tgtaggaatc 660acgggggtga ttttcatcgg gctgggaatg ttcatgatct tcgaggggggt tgtaggaatc 660
ggtggcaggg tagtgggtta g 681ggtggcaggg tagtggggtta g 681
<210> 3<210> 3
<211> 1148<211> 1148
<212> DNA<212>DNA
<213> 人工序列<213> Artificial sequence
<400> 3<400> 3
gatcttgacg ttggtagttt tccaagtggg tgtcacctgg catgctgtgc tgtccaaacg 60gatcttgacg ttggtagttt tccaagtggg tgtcacctgg catgctgtgc tgtccaaacg 60
ggaagggttc cgtcaagcat tcgcccaatt cgatgttgca aaagtagccg ccttcaatga 120ggaagggttc cgtcaagcat tcgcccaatt cgatgttgca aaagtagccg ccttcaatga 120
ggacgacgtg gaacgcctac ttgatgatct acagattttt agaaaccgaa gaaaaatcaa 180ggacgacgtg gaacgcctac ttgatgatct acagattttt agaaaccgaa gaaaaatcaa 180
cgctgccatc accaatgcca aagcgttgct ggagttaaac gatgaaacag gcacctttga 240cgctgccatc accaatgcca aagcgttgct ggagttaaac gatgaaacag gcacctttga 240
ctcaattatt gccgaccact caactgacgc cacagccatg gtgaagcatc tcaaagcctt 300ctcaattatt gccgaccact caactgacgc cacagccatg gtgaagcatc tcaaagcctt 300
gggctttacc catatcggac tgacctcctt gagcatcctc cagcaggcca ttggggtcac 360gggctttacc catatcggac tgacctcctt gagcatcctc cagcaggcca ttggggtcac 360
agagctgaag gctgcctaag atataactcc gatgacaaca gcacagtttc tagcgctttt 420agagctgaag gctgcctaag atataactcc gatgacaaca gcacagtttc tagcgctttt 420
tctggtgtgg atcgcagcaa ttgcatcccc tgggccagac cttttccaga tcatcaggct 480tctggtgtgg atcgcagcaa ttgcatcccc tgggccagac cttttccaga tcatcaggct 480
aagtgccaaa aaccgccgtg atggcgtact gactgccgta ggcatcatgg tgggaaactc 540aagtgccaaa aaccgccgtg atggcgtact gactgccgta ggcatcatgg tgggaaactc 540
catctggatc atagccagcc tccttggtct ctcattcctg tcttcctcac cctcactggc 600catctggatc atagccagcc tccttggtct ctcattcctg tcttcctcac cctcactggc 600
ctgctgtggt ttgtggggtt cgccgtcttg gtccgcaaac tagccgctgg cctcacccga 660ctgctgtggt ttgtggggtt cgccgtcttg gtccgcaaac tagccgctgg cctcacccga 660
aatggagcca tcatcgacct gctaacgggg gtgattttca tcgggctggg aatgttcatg 720aatggagcca tcatcgacct gctaacgggg gtgattttca tcgggctggg aatgttcatg 720
atcttcgagg gggttgtagg aatcggtggc agggtagtgg gttagccccg cccccaggac 780atcttcgagg gggttgtagg aatcggtggc agggtagtgg gttagccccg cccccaggac 780
gtcactagac ttaggcacta tgcaacctga agaagtgcac atcaaggacg agaccatcaa 840gtcactagac ttaggcacta tgcaacctga agaagtgcac atcaaggacg agaccatcaa 840
gttaggtcag ttcatcaaat tggccaacct tgtcgaatca ggcggagcgg ccaaagatgc 900gttaggtcag ttcatcaaat tggccaacct tgtcgaatca ggcggagcgg ccaaagatgc 900
catcgctaac ggtgatgtca ccgtcaatgg tgaagtggat acccgaaggg gtaagacact 960catcgctaac ggtgatgtca ccgtcaatgg tgaagtggat acccgaaggg gtaagacact 960
tcgcgatggc gatgtggtgt gcatcggcga ggtatgcgcg caggtgtcta ctggtgacgc 1020tcgcgatggc gatgtggtgt gcatcggcga ggtatgcgcg caggtgtcta ctggtgacgc 1020
agccgacgac gattattttg acgaagccac cgcaaacgat gacttcgatc ccgaaaagtg 1080agccgacgac gattattttg acgaagccac cgcaaacgat gacttcgatc ccgaaaagtg 1080
gaggaacatg taatgccagc ctttgaggca atgccaggaa tgccgtattg gatcgacctg 1140gaggaacatg taatgccagc ctttgaggca atgccaggaa tgccgtattg gatcgacctg 1140
tccacctc 1148tccacctc 1148
<210> 4<210> 4
<211> 1470<211> 1470
<212> DNA<212>DNA
<213> 谷氨酸棒杆菌(C. glutamicum)<213> Corynebacterium glutamicum (C. glutamicum)
<400> 4<400> 4
atgttgagtt ttgcgaccct tcgtggccgc atttcaacag ttgacgctgc aaaagccgca 60atgttgagtt ttgcgaccct tcgtggccgc atttcaacag ttgacgctgc aaaagccgca 60
cctccgccat cgccactagc cccgattgat ctcactgacc atagtcaagt ggccggtgtg 120cctccgccat cgccactagc cccgattgat ctcactgacc atagtcaagt ggccggtgtg 120
atgaatttgg ctgcgagaat tggcgatatt ttgctttctt caggtacgtc aaatagtgac 180atgaatttgg ctgcgagaat tggcgatatt ttgctttctt caggtacgtc aaatagtgac 180
accaaggtac aagttcgagc agtgacctct gcgtacggtt tgtactacac gcacgtggat 240accaaggtac aagttcgagc agtgacctct gcgtacggtt tgtactacac gcacgtggat 240
atcacgttga atacgatcac catcttcacc aacatcggtg tggagaggaa gatgccggtc 300atcacgttga atacgatcac catcttcacc aacatcggtg tggagaggaa gatgccggtc 300
aacgtgtttc atgttgtagg caagttggac accaacttct ccaaactgtc tgaggttgac 360aacgtgtttc atgttgtagg caagttggac accaacttct ccaaactgtc tgaggttgac 360
cgtttgatcc gttccattca ggctggtgcg accccgcctg aggttgccga gaaaatcctg 420cgtttgatcc gttccattca ggctggtgcg accccgcctg aggttgccga gaaaatcctg 420
gacgagttgg agcaatcccc tgcgtcttat ggtttccctg ttgcgttgct tggctgggca 480gacgagttgg agcaatcccc tgcgtcttat ggtttccctg ttgcgttgct tggctgggca 480
atgatgggtg gtgctgttgc tgtgctgttg ggtggtggat ggcaggtttc cctaattgct 540atgatgggtg gtgctgttgc tgtgctgttg ggtggtggat ggcaggtttc cctaattgct 540
tttattaccg cgttcacgat cattgccacg acgtcatttt tgggaaagaa gggtttgcct 600tttattaccg cgttcacgat cattgccacg acgtcatttt tgggaaagaa gggtttgcct 600
actttcttcc aaaatgttgt tggtggtttt attgccacgc tgcctgcatc gattgcttat 660actttcttcc aaaatgttgt tggtggtttt attgccacgc tgcctgcatc gattgcttat 660
tctttggcgt tgcaatttgg tcttgagatc aaaccgagcc agatcatcgc atctggaatt 720tctttggcgt tgcaatttgg tcttgagatc aaaccgagcc agatcatcgc atctggaatt 720
gttgtgctgt tggcaggttt gacactcgtg caatctctgc aggacggcat cacgggcgct 780gttgtgctgttggcaggttt gacactcgtg caatctctgc aggacggcat cacgggcgct 780
ccggtgacag caagtgcacg atttttcgaa acactcctgt ttaccggcgg cattgttgct 840ccggtgacag caagtgcacg atttttcgaa acactcctgt ttaccggcgg cattgttgct 840
ggcgtgggtt tgggcattca gctttctgaa atcttgcatg tcatgttgcc tgccatggag 900ggcgtgggtt tgggcattca gctttctgaa atcttgcatg tcatgttgcc tgccatggag 900
tccgctgcag cacctaatta ttcgtctaca ttcgcccgca ttatcgctgg tggcgtcacc 960tccgctgcag cacctaatta ttcgtctaca ttcgcccgca ttatcgctgg tggcgtcacc 960
gcagcggcct tcgcagtggg ttgttacgcg gagtggtcct cggtgattat tgcggggctt 1020gcagcggcct tcgcagtggg ttgttacgcg gagtggtcct cggtgattat tgcggggctt 1020
actgcgctga tgggttctgc gttttattac ctcttcgttg tttatttagg ccccgtctct 1080actgcgctga tgggttctgc gtttattac ctcttcgttg tttattagg ccccgtctct 1080
gccgctgcga ttgctgcaac agcagttggt ttcactggtg gtttgcttgc ccgtcgattc 1140gccgctgcga ttgctgcaac agcagttggt ttcactggtg gtttgcttgc ccgtcgattc 1140
ttgattccac cgttgattgt ggcgattgcc ggcatcacac caatgcttcc aggtctagca 1200ttgattccac cgttgattgt ggcgattgcc ggcatcacac caatgcttcc aggtctagca 1200
atttaccgcg gaatgtacgc caccctgaat gatcaaacac tcatgggttt caccaacatt 1260atttaccgcg gaatgtacgc caccctgaat gatcaaacac tcatgggttt caccaacatt 1260
gcggttgctt tagccactgc ttcatcactt gccgctggcg tggttttggg tgagtggatt 1320gcggttgctt tagccactgc ttcatcactt gccgctggcg tggttttggg tgagtggatt 1320
gcccgcaggc tacgtcgtcc accacgcttc aacccatacc gtgcatttac caaggcgaat 1380gcccgcaggc tacgtcgtcc accacgcttc aacccatacc gtgcatttac caaggcgaat 1380
gagttctcct tccaggagga agctgagcag aatcagcgcc ggcagagaaa acgtccaaag 1440gagttctcct tccaggagga agctgagcag aatcagcgcc ggcagagaaa acgtccaaag 1440
actaatcaga gattcggtaa taaaaggtaa 1470actaatcaga gattcggtaa taaaaggtaa 1470
<210> 5<210> 5
<211> 1400<211> 1400
<212> DNA<212>DNA
<213> 人工序列<213> Artificial sequence
<400> 5<400> 5
aaggaatatc ccggagaacc ggtgaaccat tcaccgtcga tccaatgatg tgtatgaagc 60aaggaatatc ccggagaacc ggtgaaccat tcaccgtcga tccaatgatg tgtatgaagc 60
ttgcagaggc tctcgacctt gatccagtag aggttttaag tgcagcgaaa gttcccgaat 120ttgcagaggc tctcgacctt gatccagtag aggttttaag tgcagcgaaa gttcccgaat 120
ctgaatggcc aaatttttcg aagatcatct cccaaagtga ctatgtgaag catgtagaca 180ctgaatggcc aaatttttcg aagatcatct cccaaagtga ctatgtgaag catgtagaca 180
taacaagact gaccgtccgc cagcaagatc tagtcatcaa tctggtcaac gaatttaagg 240taacaagact gaccgtccgc cagcaagatc tagtcatcaa tctggtcaac gaatttaagg 240
agcttaattt gaacacgcca tatgaaaagt gactaatttc aacccaaacg ggagcctaag 300agcttaattt gaacacgcca tatgaaaagt gactaatttc aacccaaacg ggagcctaag 300
tgaaatgaaa taatcccctc accaactggc gacattcaaa caccgtttca tttccaaaca 360tgaaatgaaa taatcccctc accaactggc gacattcaaa caccgtttca tttccaaaca 360
tcgagccaag ggaaaagaaa gcccctaagc cccgtgttat taaatggaga ctttttggag 420tcgagccaag ggaaaagaaa gcccctaagc cccgtgttat taaatggaga ctttttggag 420
acctcaagcc aaaaaggggc attttcatta agaaaatacc cctttgacct ggtgttattg 480acctcaagcc aaaaaggggc attttcatta agaaaatacc cctttgacct ggtgttattg 480
agctggagaa gagacttgaa ctctcaacct acgcattaca agtgcgttgc gctgccaatt 540agctggagaa gagacttgaa ctctcaacct acgcattaca agtgcgttgc gctgccaatt 540
gcgccactcc agcaccgcag atgctgatga tcaacaacta cgaatacgta tcttagcgta 600gcgccactcc agcaccgcag atgctgatga tcaacaacta cgaatacgta tcttagcgta 600
tgtgtacatc acaatggaat tcggggctag agtatctggt gaaccgtgca taaacgacct 660tgtgtacatc acaatggaat tcggggctag agtatctggt gaaccgtgca taaacgacct 660
gtgattggac tctttttcct tgcaaaatgt tttccagcgg aaatcaacct gcttaggcgt 720gtgattggac tctttttcct tgcaaaatgt tttccagcgg aaatcaacct gcttaggcgt 720
ctttcgctta aatagcgtag aatatcgggt cgatcgcttt taaacactca ggaggatcct 780ctttcgctta aatagcgtag aatatcgggt cgatcgcttt taaacactca ggaggatcct 780
tgccggccaa aatcacggac actcgtccca ccccagaatc ccttcacgct gttgaagagg 840tgccggccaa aatcacggac actcgtccca ccccagaatc ccttcacgct gttgaagagg 840
aaaccgcagc cggtgcccgc aggattgttg ccacctattc taaggacttc ttcgacggcg 900aaaccgcagc cggtgcccgc aggattgttg ccacctattc taaggacttc ttcgacggcg 900
tcactttgat gtgcatgctc ggcgttgaac ctcagggcct gcgttacacc aaggtcgctt 960tcactttgat gtgcatgctc ggcgttgaac ctcagggcct gcgttacacc aaggtcgctt 960
ctgaacacga ggaagctcag ccaaagaagg ctacaaagcg gactcgtaag gcaccagcta 1020ctgaacacga ggaagctcag ccaaagaagg ctacaaagcg gactcgtaag gcaccagcta 1020
agaaggctgc tgctaagaaa acgaccaaga agaccactaa gaaaactact aaaaagacca 1080agaaggctgc tgctaagaaa acgaccaaga agaccactaa gaaaactact aaaaagacca 1080
ccgcaaagaa gaccacaaag aagtcttaag ccggatctta tatggatgat tccaatagct 1140ccgcaaagaa gaccacaaag aagtcttaag ccggatctta tatggatgat tccaatagct 1140
ttgtagttgt tgctaaccgt ctgccagtgg atatgactgt ccacccagat ggtagctata 1200ttgtag ttgt tgctaaccgt ctgccagtgg atatgactgt ccaccccagat ggtagctata 1200
gcatctcccc cagccccggt ggccttgtca cggggctttc ccccgttctg gaacaacatc 1260gcatctcccc cagccccggt ggccttgtca cggggctttc ccccgttctg gaacaacatc 1260
gtggatgttg ggtcggatgg cctggaactg tagatgttgc acccgaacca tttcgaacag 1320gtggatgttg ggtcggatgg cctggaactg tagatgttgc acccgaacca tttcgaacag 1320
atacgggtgt tttgctgcac cctgttgtcc tcactgcaag tgactatgaa ggcttctacg 1380atacgggtgttttgctgcac cctgttgtcc tcactgcaag tgactatgaa ggcttctacg 1380
agggcttttc aaacgcaacg 1400agggcttttc aaacgcaacg 1400
<210> 6<210> 6
<211> 697<211> 697
<212> DNA<212>DNA
<213> 人工序列<213> Artificial sequence
<400> 6<400> 6
aaggaggaca accatgacaa cagcacagtt tctagcgctt tttctggtgt ggatcgcagc 60aaggaggaca accatgacaa cagcacagtt tctagcgctt tttctggtgt ggatcgcagc 60
aattgcatcc cctgggccag accttttcca gatcatcagg ctaagtgcca aaaaccgccg 120aattgcatcc cctgggccag accttttcca gatcatcagg ctaagtgcca aaaaccgccg 120
tgatggcgta ctgactgccg taggcatcat ggtgggaaac tccatctgga tcatagccag 180tgatggcgta ctgactgccg taggcatcat ggtgggaaac tccatctgga tcatagccag 180
cctccttggg ctctcggcac tgatctccac gtatccagca attttgaacc tgttgcagct 240cctccttggg ctctcggcac tgatctccac gtatccagca attttgaacc tgttgcagct 240
cgtcggtggc ggttatttga cctggatggg catcggggcg gtgaggtcat ggtggacgaa 300cgtcggtggc ggttattga cctggatggg catcggggcg gtgaggtcat ggtggacgaa 300
acgctccaca cagcaagctg cagcggattc tcaagctgta gagaatacgt tggtgacagc 360acgctccaca cagcaagctg cagcggattc tcaagctgta gagaatacgt tggtgacagc 360
cacggctgca tctgtcggag tgtggccagc tattcgatct ggcattgcta ccaacttgtc 420cacggctgca tctgtcggag tgtggccagc tattcgatct ggcattgcta ccaacttgtc 420
caaccccaaa gctgtgctgt tttttggttc cgttttcgcc caatttgtta gacctgacat 480caaccccaaa gctgtgctgt tttttggttc cgttttcgcc caatttgtta gacctgacat 480
gggaatcggg tggagtattt tcattggagt cttcctcacc ctcactggcc tgctgtggtt 540gggaatcggg tggagtattt tcattggagt cttcctcacc ctcactggcc tgctgtggtt 540
tgtggggttc gccgtcttgg tccgcaaact agccgctggc ctcacccgaa atggagccat 600tgtggggttc gccgtcttgg tccgcaaact agccgctggc ctcacccgaa atggagccat 600
catcgacctg ctaacggggg tgattttcat cgggctggga atgttcatga tcttcgaggg 660catcgacctg ctaacggggg tgattttcat cgggctggga atgttcatga tcttcgaggg 660
ggttgtagga atcggtggca gggtagtggg ttaataa 697ggttgtagga atcggtggca gggtagtggg ttaataa 697
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