CN106854247A - A kind of preparation method of the bacterial virus catenase that can crack Escherichia coli and salmonella - Google Patents
A kind of preparation method of the bacterial virus catenase that can crack Escherichia coli and salmonella Download PDFInfo
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Abstract
Description
技术领域technical field
本发明涉及动物生物医药工程技术领域,更具体地,涉及一种可以裂解大肠杆菌及沙门氏菌的噬菌体裂解酶的制备方法。The invention relates to the technical field of animal biomedical engineering, and more specifically, relates to a preparation method of a phage lyase capable of lysing Escherichia coli and Salmonella.
背景技术Background technique
大肠杆菌(Escherichia coli)既是人和动物肠道中的一种正常栖息菌,同时也是一种重要的致病菌。大肠杆菌大致可分为肠道非致病性共生菌株、肠道致病性菌株和肠道外致病性菌株三大类。作为一种人和动物常见的致病菌,它可导致肠道感染、尿道感染、全身性感染和其它临床感染等。其中肠道外致病性菌株可引起严重的肠道外感染,尤其是尿道感染,并且在抗生素耐药性传播中扮演重要角色。在大肠杆菌多重耐药性菌株中,肠道外致病性菌株比例居多。多重耐药性问题的出现,给大肠杆菌感染的防控增添了不少难题。Escherichia coli ( Escherichia coli ) is not only a normal resident bacterium in human and animal intestines, but also an important pathogenic bacterium. Escherichia coli can be roughly divided into three categories: intestinal non-pathogenic commensal strains, enteropathogenic strains and extraintestinal pathogenic strains. As a common pathogenic bacteria in humans and animals, it can cause intestinal infection, urinary tract infection, systemic infection and other clinical infections. Extraintestinal pathogenic strains can cause severe extraintestinal infections, especially urinary tract infections, and play an important role in the spread of antibiotic resistance. Among the multidrug-resistant strains of Escherichia coli, the proportion of extra-intestinal pathogenic strains was the majority. The emergence of multi-drug resistance has added many difficulties to the prevention and control of E. coli infection.
沙门氏菌(Salmonella)是革兰氏阴性肠道菌,是一种重要的食源性疾病的病原,已经在世界范围内造成重大的经济损失并严重威胁到公共卫生安全。由沙门氏菌感染导致的沙门氏菌病是一种食源性人畜共患病,临床症状包括肠胃炎、菌血症、伤寒症和病灶感染等;肠胃炎症状可从温和型腹部不适到呕吐脱水,甚至出现死亡。人经常因为摄入被污染的动物源食品而感染沙门氏菌,如摄入被沙门氏菌污染的鸡蛋。在全球范围内,每年由沙门氏菌感染导致的肠胃炎案例估计可达93,800,000例,死亡人数达155,000人之多,其中由食物传播引起的案例占85%左右。Salmonella ( Salmonella ), a gram-negative enteric bacterium, is an important pathogen of food-borne diseases, which has caused significant economic losses worldwide and seriously threatened public health security. Salmonellosis caused by Salmonella infection is a foodborne zoonosis with clinical symptoms including gastroenteritis, bacteremia, typhoid fever, and focal infection; symptoms of gastroenteritis can range from mild abdominal discomfort to vomiting and dehydration, and even die. Humans often become infected with Salmonella through ingestion of contaminated food of animal origin, such as eggs contaminated with Salmonella. Globally, there are an estimated 93,800,000 gastroenteritis cases and 155,000 deaths each year caused by Salmonella infection, of which about 85% are caused by food transmission.
在大肠杆菌耐药现状中,β-内酰胺类抗生素耐药问题尤为严重。这类菌株的耐药机制主要是因为β-内酰胺酶的存在,该酶能够降解β-内酰胺类抗生素。近年来,在肠道外致病性菌株中出现了新的β-内酰胺酶,如质粒介导的AmpC β-内酰胺酶、广谱β-内酰胺酶和碳青霉烯酶等。最出名的新型β-内酰胺酶于1983年首次被报道,并被命名为广谱β-内酰胺酶。这类酶能够降解青霉素类、头孢菌素类和单环β-内酰胺类抗生素,但不能降解头霉素和碳青霉烯类抗生素,其活性可被典型的β-内酰胺酶抑制剂所抑制。碳青霉烯抗性是最近出现的新问题,主要是由质粒编码的碳青霉烯酶所导致的,且目前碳青霉烯抗性主要出现在医院的大肠杆菌菌株,给大肠杆菌感染的防治造成不小的难题。In the current situation of Escherichia coli drug resistance, the problem of β-lactam antibiotic resistance is particularly serious. The resistance mechanism of these strains is mainly due to the existence of β-lactamase, which can degrade β-lactam antibiotics. In recent years, new β-lactamases have appeared in pathogenic strains outside the intestinal tract, such as plasmid-mediated AmpC β-lactamase, broad-spectrum β-lactamase and carbapenemase, etc. The best-known new type of β-lactamase was first reported in 1983 and was named broad-spectrum β-lactamase. This type of enzyme can degrade penicillins, cephalosporins and monocyclic β-lactam antibiotics, but cannot degrade cephamycin and carbapenem antibiotics, and its activity can be inhibited by typical β-lactamase inhibitors inhibition. Carbapenem resistance is a new problem that has emerged recently, mainly caused by plasmid-encoded carbapenemase, and currently carbapenem resistance mainly occurs in E. coli strains in hospitals. Prevention and control poses no small problem.
沙门氏菌耐药性问题也日益严重,多重耐药菌株层出不穷,对红霉素、氨苄青霉素、复方新诺明、环丙沙星等的耐药性均见报道。规模化猪场的沙门氏菌耐药性问题也比较严峻,某研究者对分离自猪场粪样的沙门氏菌进行耐药性分析,发现分离菌株对四环素、环丙沙星、恩诺沙星、阿莫西林、卡那霉素、氟苯尼考和氨苄西林等表现出高度耐药。目前,多重耐药菌株的广泛流行,以及流行菌株不断产生的对喹诺酮类、第三代头孢菌素类等临床重要抗生素的耐药性,成为世界范围内新兴的棘手问题。因此,新型抗菌制剂的研发显得极为迫切。The problem of Salmonella drug resistance is also becoming more and more serious, and multi-drug resistant strains emerge in endlessly, and drug resistance to erythromycin, ampicillin, co-trimoxazole, ciprofloxacin, etc. have been reported. The problem of drug resistance of Salmonella in large-scale pig farms is also serious. A researcher analyzed the drug resistance of Salmonella isolated from pig farm feces and found that the isolated strains were resistant to tetracycline, ciprofloxacin, enrofloxacin, and amoxicillin. Xilin, kanamycin, florfenicol and ampicillin showed high drug resistance. At present, the widespread prevalence of multidrug-resistant strains and the continuous emergence of resistance to clinically important antibiotics such as quinolones and third-generation cephalosporins have become emerging thorny problems worldwide. Therefore, the research and development of new antibacterial agents is extremely urgent.
噬菌体广泛存在于环境中,是以真菌、细菌等微生物为宿主的病毒,烈性噬菌体具有高效的杀菌能力。噬菌体在侵染周期的末期合成一种噬菌体裂解酶,裂解酶破坏宿主的细胞壁,使得宿主细胞渗透压失衡并最终破裂而达到释放子代噬菌体的目的。噬菌体及其裂解酶对抗生素耐药菌同样具有杀灭作用,通过基因工程技术,可以大量地人工合成噬菌体裂解酶。因此,噬菌体及其裂解酶具有巨大的应用前景。Bacteriophages are widely found in the environment, and they are viruses that host microorganisms such as fungi and bacteria. Potent phages have high-efficiency bactericidal capabilities. At the end of the infection cycle, the phage synthesizes a phage lyase, which destroys the cell wall of the host, causing the host cell to unbalance the osmotic pressure and finally rupture to release the progeny phage. Phages and their lytic enzymes also have a killing effect on antibiotic-resistant bacteria. Through genetic engineering technology, a large number of phage lytic enzymes can be artificially synthesized. Therefore, phage and its lyase have great application prospects.
发明内容Contents of the invention
本发明所要解决的技术问题是寻求新的可同时抑制大肠杆菌和沙门氏菌的抗菌制剂,以期减少和替代抗生素的使用,提供表达能裂解大肠杆菌及沙门氏菌的噬菌体重组裂解酶TrxA-lysin的重组大肠杆菌BL21 /pET-32a-lysin的制备方法。The technical problem to be solved by the present invention is to seek new antibacterial preparations that can simultaneously inhibit Escherichia coli and Salmonella, in order to reduce and replace the use of antibiotics, and provide recombinant Escherichia coli expressing the phage recombinant lyase TrxA-lysin that can lyse Escherichia coli and Salmonella The preparation method of BL21/pET-32a-lysin.
本发明的第二个目的是提供上述方法制备得到的重组裂解酶TrxA-lysin。The second object of the present invention is to provide the recombinant lyase TrxA-lysin prepared by the above method.
本发明的第三个目的是提供所述重组裂解酶TrxA-lysin用于裂解大肠杆菌和沙门氏菌。The third object of the present invention is to provide the recombinant lyase TrxA-lysin for lysing Escherichia coli and Salmonella.
本发明的目的是通过以下技术方案予以实现的:The purpose of the present invention is achieved through the following technical solutions:
一种可以裂解大肠杆菌及沙门氏菌的噬菌体裂解酶的制备方法,包括以下步骤:A preparation method of a phage lyase capable of cracking Escherichia coli and Salmonella, comprising the following steps:
S1. 扩增噬菌体ECGD1的裂解酶lysin基因;与质粒相连,并转入基因工程菌获得含lysin重组质粒的基因工程菌;S1. Amplify the lysin gene of the bacteriophage ECGD1; connect with the plasmid, and transfer it into the genetically engineered bacteria to obtain the genetically engineered bacteria containing the lysin recombinant plasmid;
S2. 培养所述含lysin重组质粒的基因工程菌至菌液的OD值为0.6~0.8,用IPTG诱导含lysin重组质粒的基因工程菌,获得可溶性重组蛋白TrxA-lysin;所述裂解酶lysin基因的序列如SEQ ID NO:1所示。S2. Cultivate the genetically engineered bacteria containing the lysin recombinant plasmid until the OD value of the bacterial solution is 0.6 to 0.8, induce the genetically engineered bacteria containing the lysin recombinant plasmid with IPTG, and obtain the soluble recombinant protein TrxA-lysin; the lysin gene The sequence of is shown in SEQ ID NO:1.
优选地,S1所述裂解酶lysin基因由引物P1和P2扩增获得,所述引物P1和P2的序列如SEQ ID NO:2和SEQ ID NO:3所示。Preferably, the lysin gene of S1 is amplified by primers P1 and P2, and the sequences of the primers P1 and P2 are shown in SEQ ID NO: 2 and SEQ ID NO: 3.
pET-32a表达系统具有以下优点:属于原核表达系统,适用于噬菌体裂解酶基因的表达,自带硫氧还原蛋白TrxA基因,可增加外源蛋白的二硫键形成,增加目的蛋白的可溶性表达。The pET-32a expression system has the following advantages: it belongs to the prokaryotic expression system and is suitable for the expression of phage lyase gene. It has a thioredoxin TrxA gene, which can increase the disulfide bond formation of foreign proteins and increase the soluble expression of target proteins.
作为一种具体的实施方式,本发明设计引物,采用PCR的方法获得可裂解大肠杆菌及沙门氏菌的噬菌体裂解酶lysin基因。将该基因连接于pET-32a表达质粒中构建重组表达质粒pET-32a-lysin,以ITPG诱导表达重组蛋白TrxA-lysin。As a specific embodiment, the present invention designs primers to obtain the phage lysin gene capable of lysing Escherichia coli and Salmonella by using PCR method. The gene was connected to the pET-32a expression plasmid to construct the recombinant expression plasmid pET-32a-lysin, and the recombinant protein TrxA-lysin was induced and expressed by ITPG.
优选地,S2所述IPTG诱导的条件为:IPTG的终浓度为1mM,诱导时间为2h,诱导温度为37℃。Preferably, the conditions for IPTG induction in S2 are as follows: the final concentration of IPTG is 1 mM, the induction time is 2 hours, and the induction temperature is 37°C.
作为一种更优选地实施方式,本发明所述噬菌体裂解酶的制备方法的S1,包括以下步骤:As a more preferred embodiment, S1 of the preparation method of the phage lyase of the present invention comprises the following steps:
(1)设计引物,利用PCR技术对能裂解大肠杆菌及沙门氏菌的噬菌体ECGD1的裂解酶lysin基因进行扩增。(1) Design primers and use PCR technology to amplify the lysin gene of bacteriophage ECGD1 that can lyse E. coli and Salmonella.
(2)将获得的lysin基因连接至pET-32a并筛选得到重组质粒pET-32a-lysin;采用热激转化法将pET-32a-lysin重组质粒导入大肠杆菌BL21中,获得重组大肠杆菌BL21 /pET-32a-lysin。(2) Link the obtained lysin gene to pET-32a and screen to obtain the recombinant plasmid pET-32a-lysin; use the heat shock transformation method to introduce the pET-32a-lysin recombinant plasmid into E. coli BL21 to obtain recombinant E. coli BL21/pET -32a-lysin.
优选地,(1)所述PCR的反应程序为:98℃预变性3 min;98℃变性10 s,55℃退火10s,72℃延伸10 s,完成30循环;72℃后延伸5 min。Preferably, (1) the reaction program of the PCR is: pre-denaturation at 98°C for 3 min; denaturation at 98°C for 10 s, annealing at 55°C for 10 s, extension at 72°C for 10 s, completing 30 cycles; extension at 72°C for 5 min.
优选地,(2)所述热激转化法为:取大肠杆菌BL21感受态细胞,加入pET-32a-lysin重组质粒,混匀冰浴30 min,于42℃热激转化90 s后,冰浴2 min,加入LB液体培养基复苏30min,平板筛选阳性转化子。Preferably, (2) the heat-shock transformation method is as follows: take Escherichia coli BL21 competent cells, add pET-32a-lysin recombinant plasmid, mix well and ice-bath for 30 min, heat-shock transformation at 42°C for 90 s, and ice-bath After 2 minutes, LB liquid medium was added to recover for 30 minutes, and positive transformants were screened on the plate.
优选地,本发明所述噬菌体裂解酶的制备方法还包括纯化可溶性重组蛋白TrxA-lysin的步骤。Preferably, the preparation method of the phage lysing enzyme of the present invention further includes the step of purifying the soluble recombinant protein TrxA-lysin.
更优选地,所述纯化可溶性重组蛋白TrxA-lysin的步骤为:离心收集诱导表达后的BL21/pET-32a-lysin菌体细胞,洗涤,重悬后过滤,用Ni NTA Beads装入层析柱纯化重组蛋白TrxA-lysin。More preferably, the step of purifying the soluble recombinant protein TrxA-lysin is: centrifuging to collect the BL21/pET-32a-lysin bacterial cells after induced expression, washing, resuspending and filtering, and loading the chromatographic column with Ni NTA Beads Purification of recombinant protein TrxA-lysin.
本发明还提供上述方法获得的噬菌体裂解酶重组蛋白TrxA-lysin。The present invention also provides the phage lyase recombinant protein TrxA-lysin obtained by the above method.
本发明还提供所述噬菌体裂解酶重组蛋白TrxA-lysin在裂解细菌方面的应用。The invention also provides the application of the phage lyase recombinant protein TrxA-lysin in lysing bacteria.
本发明还提供所述噬菌体裂解酶重组蛋白TrxA-lysin在制备预防和/或治疗细菌感染的药物方面的应用。The present invention also provides the application of the phage lysing enzyme recombinant protein TrxA-lysin in the preparation of medicaments for preventing and/or treating bacterial infection.
优选地,上述应用中,所述细菌为大肠杆菌和/或沙门氏菌。Preferably, in the above application, the bacteria are Escherichia coli and/or Salmonella.
与现有技术相比,本发明具有以下有益效果:Compared with the prior art, the present invention has the following beneficial effects:
本发明提供了一种表达噬菌体ECGD1裂解酶lysin基因的重组大肠杆菌的制备方法。即采用E.coli BL21/pET-32a大肠杆菌表达系统,对噬菌体ECGD1裂解酶lysin基因进行了重组表达,通过硫铁还原蛋白TrxA增加目的蛋白二硫键的形成和表达条件的优化,成功获得高活性的可溶性蛋白,蛋白纯化无需经过复杂的变性复性过程。同时,将诱导后大肠杆菌BL21/pET-32a-lysin重悬液于-80℃和室温之间冻融3次后,细菌重悬液变得澄清、粘稠,即通过简单的冻融,可使细胞破裂并将大部分目的蛋白释放出来。本发明中重组裂解酶粗提物的制备可通过简单的冻融获得,不仅操作简便、成本低廉,而且不易导致目的蛋白变性,适合用于裂解酶的大量制备。The invention provides a method for preparing recombinant Escherichia coli expressing phage ECGD1 lyase lysin gene. That is, the E.coli BL21/pET-32a Escherichia coli expression system was used to recombine and express the lysin gene of the phage ECGD1 lysing enzyme, and the formation of the disulfide bond of the target protein was increased through the thireroreductin TrxA and the optimization of the expression conditions successfully obtained high Active soluble protein, protein purification does not need to go through complicated denaturation and refolding process. At the same time, after freezing and thawing the induced Escherichia coli BL21/pET-32a-lysin suspension three times between -80°C and room temperature, the bacterial suspension became clear and viscous, that is, through simple freezing and thawing, it can Ruptures the cells and releases most of the protein of interest. The preparation of the crude extract of the recombinant lyase in the present invention can be obtained by simple freezing and thawing, which is not only easy to operate and low in cost, but also not easy to cause denaturation of the target protein, and is suitable for mass preparation of the lyase.
将制备得到的重组蛋白TrxA-lysin用于裂解氯仿预处理过的大肠杆菌和沙门氏菌菌株,发现TrxA-lysin对多株大肠杆菌和沙门氏菌菌株具有裂解作用,即证实了TrxA-lysin可同时裂解大肠杆菌和沙门氏菌。同时TrxA-lysin的宽裂解谱揭示其在大肠杆菌和沙门氏菌感染的防控上具有潜在的应用价值。The prepared recombinant protein TrxA-lysin was used to lyse Escherichia coli and Salmonella strains pretreated with chloroform, and it was found that TrxA-lysin had a lytic effect on multiple Escherichia coli and Salmonella strains, which confirmed that TrxA-lysin could lyse Escherichia coli at the same time and Salmonella. At the same time, the wide cleavage spectrum of TrxA-lysin reveals its potential application value in the prevention and control of Escherichia coli and Salmonella infection.
附图说明Description of drawings
图1为噬菌体ECGD1电镜照片(放大49,000倍)。Figure 1 is an electron micrograph of bacteriophage ECGD1 (magnified 49,000 times).
图2为噬菌体ECGD1裂解酶lysin基因的PCR扩增结果:M为DL 2 000 DNA Marker;1为阴性对照;2和3为裂解酶lysin基因的PCR扩增产物。Figure 2 is the PCR amplification result of the lysin gene of bacteriophage ECGD1: M is DL 2 000 DNA Marker; 1 is the negative control; 2 and 3 are the PCR amplification products of the lysin gene.
图3为重组质粒pET-32a-lysin的双酶切鉴定结果:M1为DL10000 DNA Marker;M2为DL 5 000 DNA Marker;1为重组质粒pET-32a-lysin;2为重组质粒pET-32a-lysin经过Nco I、Hind III进行双酶切鉴定结果。Figure 3 is the double enzyme digestion identification results of recombinant plasmid pET-32a-lysin: M1 is DL10000 DNA Marker; M2 is DL 5000 DNA Marker; 1 is recombinant plasmid pET-32a-lysin; 2 is recombinant plasmid pET-32a-lysin The results were identified by double enzyme digestion with Nco I and Hind III.
图4为裂解酶重组蛋白TrxA-lysin的纯化结果:M为蛋白标准分子量;1为BL21/pET-32a诱导4 h的细菌总蛋白;2和3分别为BL21/pET-32a-lysin诱导2 h的细菌总蛋白及其菌体冻融上清经0.22 μm过滤后的样品;4为镍柱纯化后的裂解酶重组蛋白。Figure 4 shows the purification results of the lyase recombinant protein TrxA-lysin: M is the standard molecular weight of the protein; 1 is the total bacterial protein induced by BL21/pET-32a for 4 h; 2 and 3 are the 2 h of induction by BL21/pET-32a-lysin 4 is the lyase recombinant protein purified by nickel column.
图5为裂解酶重组蛋白TrxA-lysin对氯仿预处理过的DH5α细胞的裂解效果。Figure 5 shows the lysing effect of the lysing enzyme recombinant protein TrxA-lysin on DH5α cells pretreated with chloroform.
具体实施方式detailed description
下面结合说明书附图和具体实施例,进一步阐述本发明。这些实施例仅用于说明本发明而不用于限制本发明的范围。下例实施例中未注明具体条件的实验方法,通常按照本领域常规条件或按照制造厂商建议的条件。除非另行定义,文中所使用的所有专业与科学用语与本领域技术人员熟悉的意义相同。The present invention will be further elaborated below in conjunction with the accompanying drawings and specific embodiments of the specification. These examples are only for illustrating the present invention and are not intended to limit the scope of the present invention. For the experimental methods not indicated in the following examples, the specific conditions are usually in accordance with the conventional conditions in this field or the conditions suggested by the manufacturer. Unless otherwise defined, all professional and scientific terms used herein have the same meanings as those familiar to those skilled in the art.
实施例1 含lysin基因的大肠杆菌BL21表达菌株的构建Example 1 Construction of Escherichia coli BL21 expression strain containing lysin gene
包括以下步骤:Include the following steps:
S1. 重组质粒pET-32a-lysin的构建S1. Construction of recombinant plasmid pET-32a-lysin
S11. lysin基因的获得:从生活污水中分离得到了一株可同时裂解大肠杆菌及沙门氏菌的噬菌体(命名为ECGD1,其电镜照片见图1),大量培养噬菌体后提取该噬菌体的基因组,并进行高通量测序和测序结果的拼接和分析。S11. Acquisition of lysin gene: A phage (named ECGD1, which can lyse Escherichia coli and Salmonella at the same time) was isolated from domestic sewage. High-throughput sequencing and assembly and analysis of sequencing results.
噬菌体ECGD1基因组的提取:取600 μl过滤除菌后的噬菌体浓缩液,加入DNase I与RNase A至终浓度均为1 μg/ml,37℃消化过夜(彻底去除宿主菌核酸),80℃灭活15 min(注意:该温度不能灭活RNase A);向浓缩液中分别加入24 μl的0.5 mol/L EDTA(终浓度20mmol/L),1.5 μl的20 mg/mL蛋白酶K(终浓度50 μg/mL),30 μl的10%SDS(终浓度0.5%),56℃水浴1 h;加等体积平衡酚,温和震荡1 min,12 000 rpm离心5 min,转移上层水相于新的离心管中;加等体积酚—氯仿—异戊醇(25:24:1),温和震荡1 min,12 000 rpm离心5 min,转移上层水相于新离心管中;加等体积异丙醇,-70℃放置3 h;4℃,13 000 rpm离心20min,缓慢倒掉上清;加入等体积75%冰乙醇,静置1 min,7 000 g离心1 min,缓慢倒掉乙醇,室温开盖放置10 min,使乙醇完全挥发,用适量的去离子水溶解DNA,-20℃保存。Extraction of bacteriophage ECGD1 genome: take 600 μl of phage concentrate after filter sterilization, add DNase I and RNase A to a final concentration of 1 μg/ml, digest overnight at 37°C (to completely remove host bacterial nucleic acid), inactivate at 80°C 15 min (note: this temperature cannot inactivate RNase A); add 24 μl of 0.5 mol/L EDTA (final concentration 20 mmol/L) and 1.5 μl of 20 mg/mL proteinase K (final concentration 50 μg /mL), 30 μl of 10% SDS (final concentration 0.5%), bathed in water at 56°C for 1 h; add an equal volume of equilibrated phenol, shake gently for 1 min, centrifuge at 12 000 rpm for 5 min, transfer the upper aqueous phase to a new centrifuge tube Medium; add an equal volume of phenol-chloroform-isoamyl alcohol (25:24:1), shake gently for 1 min, centrifuge at 12 000 rpm for 5 min, transfer the upper aqueous phase to a new centrifuge tube; add an equal volume of isopropanol, - Place at 70°C for 3 h; centrifuge at 13,000 rpm for 20 min at 4°C, and slowly pour off the supernatant; add an equal volume of 75% ice ethanol, let stand for 1 min, centrifuge at 7,000 g for 1 min, slowly pour off the ethanol, and store at room temperature After 10 min, the ethanol was completely evaporated, and the DNA was dissolved with an appropriate amount of deionized water, and stored at -20°C.
将噬菌体ECGD1全基因序列上传至GenBank(序列号为:KU522583.1),通过序列注释和比对获得了lysin基因,大小为501 bp。根据该基因序列设计引物P1、P2,在上游引物P1中插入限制性内切酶Nco I酶切位点,Nco I为含有起始密码子ATG的融合表达酶切位点,在其5’端加上4个保护碱基CATG。在下游引物P2中插入限制性内切酶Hind III的酶切位点,在下游引物5’端加入3个保护碱基CCC。lysin基因序列如SEQ ID NO:1所示;合成的P1、P2引物序列如SEQ ID NO:2~3所示;以1 μL噬菌体ECGD1的基因组为模板,加入高保真DNA聚合酶Prime STAR Max(2×) 25 μL,10 μM的引物P1、P2各1 μL,用ddH2O补至50 μL,反应程序为98℃预变性3 min;98℃变性10 s,55℃退火10 s,72℃延伸10 s,完成30循环;72℃后延伸5min。PCR反应完成,将产物进行1%琼脂糖凝胶观察与回收,可见大小约500 bp的扩增条带,与预期结果一致(如图2)。The whole gene sequence of phage ECGD1 was uploaded to GenBank (sequence number: KU522583.1), and the lysin gene was obtained through sequence annotation and alignment, with a size of 501 bp. Design primers P1 and P2 according to the gene sequence, and insert a restriction endonuclease Nco I restriction site into the upstream primer P1, Nco I is a fusion expression restriction site containing the initiation codon ATG, at its 5' end Plus 4 protective bases CATG. A restriction endonuclease Hind III restriction site was inserted into the downstream primer P2, and three protective bases CCC were added to the 5' end of the downstream primer. The lysin gene sequence is shown in SEQ ID NO: 1; the synthetic P1 and P2 primer sequences are shown in SEQ ID NO: 2-3; 1 μL of the genome of bacteriophage ECGD1 was used as a template, and the high-fidelity DNA polymerase Prime STAR Max ( 2×) 25 μL, 1 μL each of 10 μM primers P1 and P2, made up to 50 μL with ddH 2 O, the reaction program was pre-denaturation at 98°C for 3 min; denaturation at 98°C for 10 s, annealing at 55°C for 10 s, and 72°C Extend for 10 s to complete 30 cycles; extend at 72°C for 5 min. After the PCR reaction was completed, the product was observed and recovered on a 1% agarose gel, and an amplified band with a size of about 500 bp was seen, which was consistent with the expected result (Figure 2).
S12. 重组质粒pET-32a-lysin的构建:将S11中回收的PCR产物用Nco I、Hind III进行双酶切处理,胶回收大小约500 bp的条带;以同样的方法对pET-32a空质粒进行双酶切,胶回收大小约5900 bp的条带。分别取4 μL双酶切后胶回收的lysin基因完整修饰片段和1 μL双酶切后胶回收的pET-32a空质粒,加入1 μL的T4 DNA连接酶和1 μL 的10 ×buffer,用ddH2O补至10 μL,混匀后置于16℃条件下连接过夜,将连接产物转化E.coli DH5α感受态细胞,在含有100 μg/mL 氨苄青霉素(Ampicillin)的LB琼脂培养板中,37℃培养过夜,然后挑取单个菌落。将菌落接种于含100 μg/mL 氨苄青霉素(Ampicillin)的LB液体培养基中过夜培养。PCR鉴定以待检菌液为模板,加入DNA聚合酶2×EsTaq Master Mix 10 μL,引物P1、P2各0.5 μL,模板0.5 μL,用ddH2O补至20 μL,PCR反应程序为95℃预变性5 min,95℃变性30 s,55℃退火30 s,72℃延伸1 min,30个循环;72℃后延伸10 min。PCR产物用1%琼脂糖凝胶电泳进行检测,可见大小约500 bp的扩增条带,与预期结果一致(如图1)。对检测阳性的菌液用质粒DNA抽提试剂盒进行质粒抽提,并进行双酶切鉴定和序列测定,双酶切后电泳出现约500 bp和5900 bp两条目的条带(如图3),并且测序鉴定结果与预期一致,即获得了重组质粒pET-32a-lysin。S12. Construction of the recombinant plasmid pET-32a-lysin: The PCR product recovered in S11 was digested with Nco I and Hind III, and a band of about 500 bp was recovered from the gel; pET-32a empty The plasmid was digested with double enzymes, and a band with a size of about 5900 bp was recovered from the gel. Take 4 μL of the complete modified fragment of lysin gene recovered from double-digested gel and 1 μL of pET-32a empty plasmid recovered from double-digested gel, add 1 μL of T4 DNA ligase and 1 μL of 10 × buffer, and use ddH Make up to 10 μL with 2 O, mix well and place at 16°C for overnight connection, transform the connection product into E.coli DH5α competent cells, and place in LB agar culture plate containing 100 μg/mL ampicillin (Ampicillin), 37 Cultivate overnight, and then pick a single colony. The colonies were inoculated in LB liquid medium containing 100 μg/mL ampicillin for overnight culture. For PCR identification, use the bacteria liquid to be tested as a template, add 10 μL of DNA polymerase 2×EsTaq Master Mix, 0.5 μL of primers P1 and P2, 0.5 μL of template, make up to 20 μL with ddH 2 O, and the PCR reaction program is 95°C pre- Denaturation for 5 min, denaturation at 95°C for 30 s, annealing at 55°C for 30 s, extension at 72°C for 1 min, 30 cycles; extension at 72°C for 10 min. The PCR product was detected by 1% agarose gel electrophoresis, and an amplified band with a size of about 500 bp was seen, which was consistent with the expected result (Figure 1). Use the plasmid DNA extraction kit to extract the plasmid from the positive bacterial solution, and perform double enzyme digestion identification and sequence determination. After double enzyme digestion, two target bands of about 500 bp and 5900 bp appeared in electrophoresis (as shown in Figure 3) , and the sequencing identification results were consistent with expectations, that is, the recombinant plasmid pET-32a-lysin was obtained.
S2. 含lysin基因的大肠杆菌BL21表达菌株的构建S2. Construction of Escherichia coli BL21 expression strain containing lysin gene
S21. 大肠杆菌BL21感受态细胞的制备:将冻存的E.coli BL21于LB平板培养基上划线复苏,挑取单菌落于LB液体培养基中过夜扩大培养。按照1:100的比例将过夜培养的BL21接种于25 ml新鲜LB液体培养基中,培养至对数期,OD600nm值约为0.6。将培养液转入离心管中,冰上放置10 min,于4℃下3000 g离心10 min。弃去上清,用预冷的0.05 mol/L的CaCl2 溶液10 mL轻轻悬浮细胞,冰上放置15-30 min后,4℃下3000 g离心10 min。弃去上清,加入4mL预冷含15%甘油的0.05 mol/L的CaCl2 溶液,轻轻悬浮细胞,冰上放置几分钟,即成感受态细胞悬液。S21. Preparation of Escherichia coli BL21 competent cells: Streak the frozen E.coli BL21 on the LB plate medium for recovery, pick a single colony and expand it overnight in the LB liquid medium. According to the ratio of 1:100, the BL21 cultivated overnight was inoculated in 25 ml of fresh LB liquid medium, cultivated to the logarithmic phase, and the OD 600nm value was about 0.6. The culture solution was transferred to a centrifuge tube, placed on ice for 10 min, and centrifuged at 3000 g for 10 min at 4°C. Discard the supernatant, gently suspend the cells with 10 mL of pre-cooled 0.05 mol/L CaCl 2 solution, place on ice for 15-30 min, and then centrifuge at 3000 g for 10 min at 4°C. Discard the supernatant, add 4 mL of pre-cooled 0.05 mol/L CaCl 2 solution containing 15% glycerol, gently suspend the cells, and place on ice for a few minutes to form a competent cell suspension.
S22. 大肠杆菌BL21的转化及转化子的PCR鉴定:取50 µL大肠杆菌BL21感受态细胞,冰浴上融解,加入1 µL pET-32a-lysin重组质粒,轻轻混匀;将以上混合物冰浴30 min后放入42℃热激90 s,迅速将混合物冰浴3 min,加入100µL的LB液体培养基,于37℃,140rpm的培养条件培养45 min。将培养后的菌液均匀涂布于含100 μg/mL 氨苄青霉素(Ampicillin)的LB固体培养基中,于37℃培养过夜,挑取单菌落。将菌落接种于含100 μg/mL 氨苄青霉素(Ampicillin)的LB液体培养基中过夜培养。PCR鉴定以待检菌液为模板,加入DNA聚合酶2×EsTaq Master Mix 10 μL,引物P1、P2各0.5 μL,模板0.5 μL,用ddH2O补至20 μL,PCR反应程序为95℃预变性5 min,95℃变性30 s,55℃退火30 s,72℃延伸1 min,30个循环;72℃后延伸10 min。。PCR产物用1%琼脂糖凝胶电泳进行检测,可见大小约500 bp的扩增条带。S22. Transformation of Escherichia coli BL21 and PCR identification of transformants: Take 50 µL E. coli BL21 competent cells, melt on ice bath, add 1 µL pET-32a-lysin recombinant plasmid, mix gently; place the above mixture in ice bath After 30 min, heat shock was placed at 42°C for 90 s, the mixture was ice-bathed for 3 min quickly, 100 µL of LB liquid medium was added, and cultured at 37°C, 140 rpm for 45 min. The cultured bacterial liquid was evenly spread on LB solid medium containing 100 μg/mL ampicillin (Ampicillin), cultured overnight at 37°C, and a single colony was picked. The colonies were inoculated in LB liquid medium containing 100 μg/mL ampicillin for overnight culture. For PCR identification, use the bacteria liquid to be tested as a template, add 10 μL of DNA polymerase 2×EsTaq Master Mix, 0.5 μL of primers P1 and P2, 0.5 μL of template, make up to 20 μL with ddH 2 O, and the PCR reaction program is 95°C pre- Denaturation for 5 min, denaturation at 95°C for 30 s, annealing at 55°C for 30 s, extension at 72°C for 1 min, 30 cycles; extension at 72°C for 10 min. . The PCR products were detected by 1% agarose gel electrophoresis, and an amplified band with a size of about 500 bp was seen.
S3. 含lysin基因的E.coli BL21/pET-32a-lysin重组表达菌诱导表达过程:S3. Induced expression process of E.coli BL21/pET-32a-lysin recombinant expression bacteria containing lysin gene:
首先是最佳诱导时间的确定,将PCR鉴定为阳性的BL21/pET-32a-lysin划线培养过夜;挑取单菌落接种于3 mL LA液体培养基中,37℃,220 rpm培养10 h,取出菌液,置4℃冰箱过夜;按1%体积比例将上述菌液接种于3 mL LA液体培养基,37℃,220 rpm振摇培养;当OD600为0.6~0.8时,加入终浓度为1 mmol/L IPTG进行诱导表达。取诱导不同时间的菌液,12,000 rpm离心2 min,去上清,细菌沉淀中加100 µL 1×SDS上样缓冲液,沸水中煮5 min左右,12,000 rpm离心2 min,取上清进行SDS-PAGE电泳检测最佳诱导时间。同时,设立pET-32a空质粒在BL21中的诱导表达菌液作为对照。上样前,将凝胶放进垂直电泳槽,将电压设置为80 V进行预电泳30 min以消除凝胶中未聚合物质的影响;上样后设定电压为80 V,待溴酚蓝染料压成一条水平的直线,即将进入分离胶时将电压升高至160 V;染料接近凝胶底部时停止电泳。取下凝胶,于水平摇床上用考马斯亮蓝染色液染色1 h左右,再用脱色液进行脱色,期间更换脱色液,脱色至蛋白区带清晰为止,用凝胶成像系统对凝胶进行照相。The first is to determine the optimal induction time. The BL21/pET-32a-lysin identified as positive by PCR was streaked and cultured overnight; a single colony was picked and inoculated in 3 mL LA liquid medium, and cultured at 37°C and 220 rpm for 10 h. Take out the bacterial liquid and put it in the refrigerator at 4°C overnight; inoculate the above bacterial liquid into 3 mL LA liquid medium according to the volume ratio of 1%, shake at 37°C and 220 rpm; when the OD600 is 0.6-0.8, add the final concentration of 1 mmol/L IPTG for inducible expression. Take the bacterial solution induced at different times, centrifuge at 12,000 rpm for 2 min, remove the supernatant, add 100 µL of 1×SDS loading buffer to the bacterial pellet, boil in boiling water for about 5 min, centrifuge at 12,000 rpm for 2 min, and take the supernatant for SDS -PAGE electrophoresis to detect the best induction time. At the same time, set up pET-32a empty plasmid induced expression bacterial solution in BL21 as a control. Before loading the sample, put the gel into a vertical electrophoresis tank, set the voltage to 80 V for pre-electrophoresis for 30 min to eliminate the influence of unpolymerized substances in the gel; after loading the sample, set the voltage to 80 V, and wait for bromophenol blue dye to Press into a horizontal straight line, and increase the voltage to 160 V when it is about to enter the separation gel; stop electrophoresis when the dye is close to the bottom of the gel. Remove the gel, stain with Coomassie Brilliant Blue staining solution for about 1 h on a horizontal shaker, and then decolorize with decolorization solution, replace the decolorization solution during the period, decolorize until the protein zone is clear, and take pictures of the gel with a gel imaging system .
结果显示最佳诱导时间为2 h。利用上述确定的最佳诱导时间,进行目的蛋白的诱导表达。离心收集诱导后的菌体,用1 mL PBS重悬后,在-80℃和室温之间反复冻融3次,4℃条件下10,000 rpm离心2 min,取上清液,加入等体积的2×SDS上样缓冲液,沸水中煮5 min左右,12,000 rpm离心2 min,取上清进行SDS-PAGE电泳检测重组蛋白的表达形式,结果显示目的蛋白主要为可溶性表达。The results showed that the optimal induction time was 2 h. Use the optimal induction time determined above to induce expression of the target protein. The induced bacteria were collected by centrifugation, resuspended in 1 mL PBS, repeatedly frozen and thawed between -80°C and room temperature three times, centrifuged at 10,000 rpm for 2 min at 4°C, the supernatant was taken, and an equal volume of 2 ×SDS loading buffer, boiled in boiling water for about 5 minutes, centrifuged at 12,000 rpm for 2 minutes, and the supernatant was taken for SDS-PAGE electrophoresis to detect the expression form of the recombinant protein. The results showed that the target protein was mainly expressed in soluble form.
S4.重组蛋白TrxA-lysin纯化过程:离心收集诱导表达后的BL21/pET-32a-lysin菌体细胞,用PBS洗涤两次。按照菌体:Lysis buffer = 1:10(W/V)将菌体悬浮起来,于-80℃和室温之间反复冻融3次,4℃条件下10,000 rpm离心20 min,取上清液,并用0.22 μm滤膜过滤,收集滤液,用于目的蛋白的纯化。S4. Purification process of recombinant protein TrxA-lysin: BL21/pET-32a-lysin bacterial cells after induced expression were collected by centrifugation, and washed twice with PBS. According to the cell: Lysis buffer = 1:10 (W/V), suspend the cell, freeze and thaw three times between -80°C and room temperature, centrifuge at 10,000 rpm for 20 min at 4°C, and take the supernatant. And filter with a 0.22 μm filter membrane, collect the filtrate for the purification of the target protein.
将Ni NTA Beads装入合适的层析柱,用5倍柱体积的Lysis buffer平衡柱子,使填料与目的蛋白处于相同的缓冲体系下,起到保护蛋白的作用。将样品加到平衡好的Ni NTABeads中(保证目的蛋白与Ni2+充分接触,提高目的蛋白的回收率),收集流出液,用于SDS-PAGE分析蛋白质的结合情况。用10~15倍柱体积的Wash buffer进行清洗,去除非特异性吸附的杂蛋白,收集洗杂液。使用5~10倍柱体积的Elution buffer洗脱柱子,收集洗脱液,即目的蛋白组分。利用10 kDa超滤离心管对纯化的蛋白进行后续脱盐及浓缩处理。纯化结果如图4所示。Load Ni NTA Beads into a suitable chromatographic column, and equilibrate the column with 5 times the column volume of Lysis buffer, so that the filler and the target protein are in the same buffer system to protect the protein. Add the sample to the well-balanced Ni NTABeads (ensure that the target protein is in full contact with Ni 2+ to improve the recovery rate of the target protein), collect the effluent, and use it for SDS-PAGE analysis of protein binding. Wash with 10-15 times the column volume of Wash buffer to remove non-specifically adsorbed impurities, and collect the wash solution. Use 5-10 times the column volume of Elution buffer to elute the column, and collect the eluate, that is, the target protein fraction. The purified protein was subsequently desalted and concentrated using a 10 kDa ultrafiltration centrifuge tube. The purification results are shown in Figure 4.
实施例2 重组蛋白TrxA-lysin的活性检测Example 2 Activity detection of recombinant protein TrxA-lysin
包括以下步骤:Include the following steps:
S1. 用重组蛋白TrxA-lysin裂解氯仿预处理过的DH5α:按1%比例将待测菌株接种于LB培养基中,过夜培养,菌液中加入终浓度为5%的氯仿,振荡培养15 min,离心收集菌体,并用去离子水清洗两次,-80℃保存备用。测定活性之前,细菌沉淀用50 mmol/L的Tris-HCl(PH8.2,含0.1% Triton X-100)重悬。将10 µL的裂解酶溶液(重组蛋白TrxA-lysin溶液)加入到90 µL细菌重悬液中,室温静置至裂解效果明显,测定OD450。试验设置三个重复,且将Tris-HCl缓冲液处理作为阴性对照。由于噬菌体ECGD1能裂解大肠杆菌基因工程菌株DH5α,因此先用DH5α作为待测菌株检测重组裂解酶TrxA-lysin的裂解活性。利用氯仿预处理的浊度法检测重组裂解酶TrxA-lysin的裂解活性,发现菌液在TrxA-lysin的作用下迅速变得澄清,OD450在10 min内降低了0.79(图5),说明本试验表达的TrxA-lysin具有裂解活性。S1. Cleavage of chloroform-pretreated DH5α with recombinant protein TrxA-lysin: Inoculate the strain to be tested in LB medium at a ratio of 1%, culture overnight, add chloroform at a final concentration of 5% to the bacterial solution, and shake for 15 min , collected by centrifugation, washed twice with deionized water, and stored at -80°C for later use. Before measuring the activity, the bacterial pellet was resuspended with 50 mmol/L Tris-HCl (pH 8.2, containing 0.1% Triton X-100). Add 10 µL of lysing enzyme solution (recombinant protein TrxA-lysin solution) to 90 µL of bacterial suspension, let stand at room temperature until the lysis effect is obvious, and measure OD 450 . The experiment was repeated three times, and Tris-HCl buffer was used as a negative control. Since phage ECGD1 can lyse Escherichia coli genetically engineered strain DH5α, DH5α was first used as the test strain to detect the cleavage activity of the recombinant lyase TrxA-lysin. The cleavage activity of the recombinant lyase TrxA-lysin was detected by the turbidity method pretreated with chloroform, and it was found that the bacterial solution quickly became clear under the action of TrxA-lysin, and the OD 450 decreased by 0.79 within 10 min (Figure 5), indicating that the The TrxA-lysin expressed in the test has cleavage activity.
S2. 多粘菌素B与重组蛋白TrxA-lysin联用裂解活菌:该试验分为两组,包括多粘菌素B与重组蛋白协同作用组和多粘菌素B对照组。协同作用组试验处理大致为,用2倍倍比稀释法制备含多粘菌素B终浓度为210、29、28、27……2-4、2-5 µg/mL的LB培养基(每个梯度3mL),往每个稀释梯度添加100 µL重组蛋白TrxA-lysin溶液,再按1%比例接种大肠杆菌DH5α,37℃振荡培养过夜。多粘菌素B对照组处理同上,但是不添加重组蛋白TrxA-lysin溶液。结果显示,多粘菌素B对照组中,多粘菌素B对DH5α最低抑菌浓度为2 µg/mL;裂解酶TrxA-lysin与多粘菌素B协同作用组中,多粘菌素B对DH5α最低抑菌浓度为1 µg/mL。即裂解酶TrxA-lysin的存在降低了多粘菌素B的最低抑菌浓度,从而证明这两者存在协同抑菌效果。S2. Combined use of polymyxin B and recombinant protein TrxA-lysin to lyse live bacteria: The test was divided into two groups, including the synergistic effect group of polymyxin B and recombinant protein and the polymyxin B control group. The experimental treatment of the synergy group is roughly as follows: prepare LB containing polymyxin B with a final concentration of 2 10 , 2 9 , 2 8 , 2 7 ... 2 -4 , 2 -5 µg/mL by 2-fold dilution method Culture medium (3 mL for each gradient), add 100 µL of recombinant protein TrxA-lysin solution to each dilution gradient, then inoculate Escherichia coli DH5α at a ratio of 1%, and culture overnight at 37°C with shaking. The polymyxin B control group was treated the same as above, but no recombinant protein TrxA-lysin solution was added. The results showed that in the polymyxin B control group, the minimum inhibitory concentration of polymyxin B on DH5α was 2 µg/mL; The minimum inhibitory concentration for DH5α is 1 µg/mL. That is, the existence of the lyase TrxA-lysin reduces the minimum inhibitory concentration of polymyxin B, thus proving that the two have synergistic antibacterial effects.
S3. 重组蛋白TrxA-lysin裂解谱的测定:利用S1所述的氯仿预处理的方法检测裂解酶重组蛋白对测试菌株的裂解活性,观察细菌裂解效果及其OD450值变化。测试菌株包括大肠杆菌和沙门氏菌临床分离菌株,以及大肠杆菌基因工程菌株。裂解酶对待测菌株的裂解值=Δ450nm(试验组降低值)—Δ450nm(Tris-HCl对照组降低值)。相对裂解活性=裂解酶对待测菌株的裂解值/裂解酶对DH5α的裂解值。以大肠杆菌DH5α为裂解阳性标准,利用氯仿预处理的浊度法检测裂解酶对大肠杆菌及沙门氏菌的裂解活性,结果显示,裂解酶对不同来源的大肠杆菌及沙门氏菌均有裂解活性,表现出对大肠杆菌及沙门氏菌的广谱杀菌活性。由相对裂解活性测定结果得知,裂解酶对大肠杆菌的裂解活性普遍高于沙门氏菌。S3. Determination of the cleavage profile of the recombinant protein TrxA-lysin: use the chloroform pretreatment method described in S1 to detect the lysing activity of the lysing enzyme recombinant protein on the test strain, and observe the bacterial lysis effect and its OD 450 value change. The test strains include clinical isolates of E. coli and Salmonella, as well as genetically engineered strains of E. coli. The lysis value of the lyase to be tested = Δ450nm (reduced value of the test group) - Δ450nm (reduced value of the Tris-HCl control group). Relative cleavage activity = cleavage value of lyase to test strain/cleavage value of lyase to DH5α. Taking Escherichia coli DH5α as the cleavage positive standard, the lysis activity of the lyase on Escherichia coli and Salmonella was detected by the turbidity method pretreated with chloroform. The results showed that the lyase had lysis activity on E. Broad-spectrum bactericidal activity against Escherichia coli and Salmonella. According to the results of relative lytic activity determination, the lytic activity of lyase to Escherichia coli is generally higher than that of Salmonella.
SEQUENCE LISTINGSEQUENCE LISTING
<110> 华南农业大学<110> South China Agricultural University
<120> 一种可以裂解大肠杆菌及沙门氏菌的噬菌体裂解酶的制备方法<120> A preparation method of phage lyase capable of lysing Escherichia coli and Salmonella
<130><130>
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<170> PatentIn version 3.3<170> PatentIn version 3.3
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<212> DNA<212>DNA
<213> 裂解酶lysin基因序列<213> lysin gene sequence
<400> 1<400> 1
atggctaaag tagttgatgt gtttgatatg ttacgttttg atgaaggact aaagctaact 60atggctaaag tagttgatgt gtttgatatg ttacgttttg atgaaggact aaagctaact 60
gtatatactg ataccgaagg gtattggacg gttggtattg gacaccttct gacaaaactt 120gtatatactg ataccgaagg gtattggacg gttggtattg gacaccttct gacaaaactt 120
aaagataaat cagaagctat acgcattctt gataacttag taggtagaaa aactaatggg 180aaagataaat cagaagctat acgcattctt gataacttag taggtagaaa aactaatggg 180
gttattactg aagcggaagc tagaaaaatc tttgagggtg acgtaaagaa agcgatacaa 240gttattactg aagcggaagc tagaaaatc tttgagggtg acgtaaagaa agcgatacaa 240
caaatccatt caagtaccat attatctcct atttacgata aagtaagtcc taatcgtaaa 300caaatccatt caagtaccat attatctcct atttacgata aagtaagtcc taatcgtaaa 300
atggctatta tcaatatggt atttcaaatg ggattgaaag gtgcagaatc tttcaaaaat 360atggctatta tcaatatggt atttcaaatg ggattgaaag gtgcagaatc tttcaaaaat 360
agcttgactt tagtgagtaa ttcatattat actcaagcct ctataaattt acgtaaaagt 420agcttgactt tagtgagtaa ttcatattat actcaagcct ctataaattt acgtaaaagt 420
aaatggtatc gccaaacgcc taatcgcgca gagcgtgtaa ttcaggtgct taaaactgga 480aaatggtatc gccaaacgcc taatcgcgca gagcgtgtaa ttcaggtgct taaaactgga 480
acattagacg cttataacta a 501acattagacg cttataacta a 501
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<212> DNA<212>DNA
<213> 引物P1序列<213> Primer P1 sequence
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<210> 3<210> 3
<211> 29<211> 29
<212> DNA<212>DNA
<213> 引物P2序列<213> Primer P2 sequence
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cccaagcttt tagttataag cgtctaatg 29cccaagcttt tagttataag cgtctaatg 29
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Cited By (7)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN109568494A (en) * | 2019-01-22 | 2019-04-05 | 浙江中医药大学 | A kind of application of bletilla alcohol extract in preparation polymyxins Trimethoprim |
CN110527655A (en) * | 2019-07-15 | 2019-12-03 | 江苏省家禽科学研究所 | A kind of duck source Escherichia coli probiotics strain and its screening preparation method and purposes |
CN110592056A (en) * | 2019-09-19 | 2019-12-20 | 昆明理工大学 | Phage lyase compound powder and its preparation method and application |
CN112175928A (en) * | 2020-10-13 | 2021-01-05 | 华中农业大学 | Application of protein encoded by salmonella bacteriophage gene as gram-negative bacteria lyase |
CN114292836A (en) * | 2021-11-05 | 2022-04-08 | 广东医科大学 | A kind of lyase for endocutting Salmonella phage, its encoding gene and its preparation method and application |
WO2023279983A1 (en) * | 2021-07-05 | 2023-01-12 | 中国科学院武汉病毒研究所 | Antibacterial peptide p104 and lyase lysp53 having broad-spectrum cracking activity, and applications thereof |
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Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN103119158A (en) * | 2010-04-27 | 2013-05-22 | 莱桑多公司 | Method of reducing biofilms |
CN104830825A (en) * | 2014-09-28 | 2015-08-12 | 中国海洋大学 | Endolysin sourced from salmonella bacteriophage and application thereof |
-
2016
- 2016-12-12 CN CN201611139628.5A patent/CN106854247A/en active Pending
Patent Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN103119158A (en) * | 2010-04-27 | 2013-05-22 | 莱桑多公司 | Method of reducing biofilms |
CN104830825A (en) * | 2014-09-28 | 2015-08-12 | 中国海洋大学 | Endolysin sourced from salmonella bacteriophage and application thereof |
Non-Patent Citations (2)
Title |
---|
FAN,J. AND MA,J.: ""Enterobacteria phage ECGD1, complete genome ACCESSION NO:KU522583"", 《GENBANK DATABASE》 * |
曾志良等: ""一株金黄色葡萄球菌噬菌体的分离及其裂解酶的原核表达"", 《中国猪业科技大会暨中国畜牧兽医学会2015年学术年会论文集》 * |
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CN110527655A (en) * | 2019-07-15 | 2019-12-03 | 江苏省家禽科学研究所 | A kind of duck source Escherichia coli probiotics strain and its screening preparation method and purposes |
CN110592056A (en) * | 2019-09-19 | 2019-12-20 | 昆明理工大学 | Phage lyase compound powder and its preparation method and application |
CN112175928A (en) * | 2020-10-13 | 2021-01-05 | 华中农业大学 | Application of protein encoded by salmonella bacteriophage gene as gram-negative bacteria lyase |
WO2023279983A1 (en) * | 2021-07-05 | 2023-01-12 | 中国科学院武汉病毒研究所 | Antibacterial peptide p104 and lyase lysp53 having broad-spectrum cracking activity, and applications thereof |
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