CN106188098A - A kind of hydridization cancer therapy drug and preparation method and application - Google Patents
A kind of hydridization cancer therapy drug and preparation method and application Download PDFInfo
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- CN106188098A CN106188098A CN201610529964.4A CN201610529964A CN106188098A CN 106188098 A CN106188098 A CN 106188098A CN 201610529964 A CN201610529964 A CN 201610529964A CN 106188098 A CN106188098 A CN 106188098A
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- hydridization
- cancer therapy
- therapy drug
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- 238000002360 preparation method Methods 0.000 title claims abstract description 40
- 239000003814 drug Substances 0.000 title claims abstract description 24
- 229940079593 drug Drugs 0.000 title claims description 22
- 238000011275 oncology therapy Methods 0.000 title claims 13
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 claims description 51
- 239000000243 solution Substances 0.000 claims description 50
- 150000001875 compounds Chemical class 0.000 claims description 39
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 claims description 30
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 claims description 30
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 claims description 15
- KWYUFKZDYYNOTN-UHFFFAOYSA-M Potassium hydroxide Chemical compound [OH-].[K+] KWYUFKZDYYNOTN-UHFFFAOYSA-M 0.000 claims description 15
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 claims description 15
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- C07D513/02—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00 in which the condensed system contains two hetero rings
- C07D513/04—Ortho-condensed systems
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D487/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00
- C07D487/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00 in which the condensed system contains two hetero rings
- C07D487/04—Ortho-condensed systems
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- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
- Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
Abstract
本发明公开了一种杂化抗癌药物及其制备方法与应用,属于医药技术领域。本发明所述的杂化抗癌药物的结构式如式Ⅰ所示:其中:X选自‑SCH2‑、‑CH=CH‑或‑(CH2)2‑取代基中的一种;Y选自‑O‑或‑OCH2O‑中的一种;R2选自‑CN或‑ONO2中的一种。本发明所设计及合成的杂化抗癌药物与XIAP‑BIR3的结合亲和力较强,促进癌细胞凋亡,非肽特征更加明显,可以作用于多个靶点,起着多重功效。 The invention discloses a hybrid anticancer drug and its preparation method and application, belonging to the technical field of medicine. The structural formula of the hybrid anticancer drug of the present invention is shown in formula I: wherein: X is selected from one of -SCH 2 -, -CH=CH- or -(CH 2 ) 2 -substituents; Y is selected from One of -O- or -OCH 2 O-; R 2 is selected from one of -CN or -ONO 2 . The hybrid anticancer drug designed and synthesized by the present invention has strong binding affinity with XIAP-BIR3, promotes cancer cell apoptosis, has more obvious non-peptide features, can act on multiple targets, and has multiple effects.
Description
技术领域technical field
本发明属于医药技术领域,特别涉及一种杂化抗癌药物及其制备方法与应用。The invention belongs to the technical field of medicine, in particular to a hybrid anticancer drug and its preparation method and application.
背景技术Background technique
在过去的几年中,为了使药物具有双重或多重作用,将两个药效团杂化在一个药物分子里的杂化药物已经成为新药开发中的新热点。由于癌症、神经变性疾病等许多严重疾病的复杂性,这些疾病很难通过一个高度选择性的药效团来治愈,这也是杂化药物近年受到特别关注的原因。相较于普通药物,杂化药物可以用来改善分子亲和力和选择性,降低副作用等。杂化分子的组成单位可以是人工设计的或者天然有机小分子、多肽、核酸等。针对作用靶点,这些药效团之间有望起着协同的作用。In the past few years, in order to make drugs have dual or multiple effects, hybrid drugs that hybridize two pharmacophores into one drug molecule have become a new hot spot in the development of new drugs. Due to the complexity of many serious diseases such as cancer and neurodegenerative diseases, these diseases are difficult to be cured by a highly selective pharmacophore, which is why hybrid drugs have received special attention in recent years. Compared with ordinary drugs, hybrid drugs can be used to improve molecular affinity and selectivity, reduce side effects, etc. The constituent units of hybrid molecules can be artificially designed or natural organic small molecules, polypeptides, nucleic acids, etc. For the target, these pharmacophores are expected to play a synergistic role.
细胞凋亡是多细胞生物体内由一系列有序信号流调控的细胞程序性死亡行为,是机体消除有害细胞、防止细胞过度增殖的正常生理过程,在生物体的生长发育、维持内环境的稳定中起着重要的作用。研究表明,细胞凋亡机制失调是癌症等疾病的重要病理学特征。在过去的几十年间,尽管癌症治疗取得了一些进展,但肿瘤细胞对各种细胞毒刺激产生耐受,细胞凋亡紊乱和失调,仍然是癌症治疗不得不克服的主要障碍。Apoptosis is a programmed cell death behavior regulated by a series of orderly signal flows in multicellular organisms. It is a normal physiological process for the body to eliminate harmful cells and prevent excessive cell proliferation. plays an important role in. Studies have shown that dysregulation of apoptosis mechanism is an important pathological feature of diseases such as cancer. In the past few decades, although some progress has been made in cancer treatment, the tolerance of tumor cells to various cytotoxic stimuli and the disorder and dysregulation of apoptosis are still the main obstacles that cancer treatment has to overcome.
凋亡抑制蛋白(Inhibitor of apoptosis,IAP)是细胞凋亡通路内抑制细胞死亡的关键调节因子。凋亡抑制蛋白在多种肿瘤细胞中过度表达。目前,IAPs家族包括八个成员,分别是Cp-IAP、Op-IAP、XIAP、c-IAP1、c-IAP2、NAIP、Livin/ML-IAP和Survivin,其中四种凋亡抑制蛋白XIAP、c-IAP1、c-IAP2以及ML-IAP直接参与调节细胞凋亡,这些IAPs蛋白主要是通过抑制半胱天冬酶(caspase)来抑制细胞凋亡。Inhibitor of apoptosis (IAP) is a key regulator of cell death in the apoptosis pathway. Inhibitors of apoptosis are overexpressed in a variety of tumor cells. At present, the IAPs family includes eight members, namely Cp-IAP, Op-IAP, XIAP, c-IAP1, c-IAP2, NAIP, Livin/ML-IAP and Survivin, among which four apoptosis inhibitory proteins XIAP, c- IAP1, c-IAP2 and ML-IAP are directly involved in the regulation of apoptosis, and these IAPs proteins inhibit apoptosis mainly by inhibiting caspase.
Smac/DIABLO(第二个线粒体来源的胱氨酸酶激活剂/低等电点IAP直接结合蛋白)是一种从线粒体中释放至细胞质的IAP内源性拮抗剂。Smac通过其N端的Ala-Val-Pro-Ile(AVPI)四肽基序与IAPs结合,从而移除IAPs对细胞凋亡的抑制作用,促进细胞凋亡。以AVPI四肽分子为先导化合物,设计和合成非肽类小分子Smac模拟物,以IAPs为靶点,开发诱导细胞凋亡的抗癌药物成为癌症治疗领域的研究热点。Smac/DIABLO (a second mitochondrial-derived cystinease activator/low isoelectric point IAP direct binding protein) is an endogenous antagonist of IAP released from mitochondria to the cytoplasm. Smac binds to IAPs through its N-terminal Ala-Val-Pro-Ile (AVPI) tetrapeptide motif, thereby removing the inhibitory effect of IAPs on cell apoptosis and promoting cell apoptosis. Using AVPI tetrapeptide molecule as the lead compound, designing and synthesizing non-peptide small molecule Smac mimics, targeting IAPs, and developing anticancer drugs that induce apoptosis have become a research hotspot in the field of cancer treatment.
发明内容Contents of the invention
为克服上述现有技术中存在的缺点与不足,本发明的首要目的在于提供一种杂化抗癌药物。所述的杂化抗癌药物能拮抗细胞凋亡抑制蛋白作用以及产生醌的甲基化物中间体。In order to overcome the shortcomings and deficiencies in the above-mentioned prior art, the primary purpose of the present invention is to provide a hybrid anticancer drug. The hybrid anticancer drug can antagonize the effect of cell apoptosis inhibitory protein and produce quinone methide intermediate.
本发明的另一目的在于提供上述杂化抗癌药物的制备方法。Another object of the present invention is to provide a preparation method of the above-mentioned hybrid anticancer drug.
本发明的再一目的在于提供上述杂化抗癌药物的应用。Another object of the present invention is to provide the application of the above-mentioned hybrid anticancer drug.
本发明的目的通过下述技术方案实现:一种杂化抗癌药物,其结构式如式Ⅰ所示:The object of the present invention is achieved through the following technical scheme: a hybrid anticancer drug, its structural formula is as shown in formula I:
其中:in:
X选自-SCH2-、-CH=CH-或-(CH2)2-取代基中的一种:X is selected from one of -SCH 2 -, -CH═CH- or -(CH 2 ) 2 - substituents:
Y选自-O-或-OCH2O-中的一种;Y is selected from one of -O- or -OCH 2 O-;
R1选自取代基中的一种; R1 is selected from one of the substituents;
R2选自-CN或-ONO2中的一种。R 2 is selected from one of -CN or -ONO 2 .
上述的杂化抗癌药物的制备方法,包括下述步骤:The preparation method of the above-mentioned hybrid anticancer drug comprises the following steps:
1)将化合物A和无机碱溶于极性有机溶剂中,悬浮液搅拌1~30分钟,然后加入碘甲烷或碘乙烷,混合液在惰性气体的保护下,室温搅拌4~12小时,浓缩,所得残留物溶于非极性有机溶剂中,有机相用水洗涤,干燥剂干燥,浓缩所得粗产品过柱纯化,得到无色油状物B;1) Dissolve compound A and inorganic base in a polar organic solvent, stir the suspension for 1 to 30 minutes, then add methyl iodide or ethyl iodide, stir the mixture at room temperature for 4 to 12 hours under the protection of an inert gas, and concentrate , the resulting residue was dissolved in a non-polar organic solvent, the organic phase was washed with water, dried with a desiccant, and the crude product obtained by concentration was purified by column to obtain a colorless oily substance B;
其中,所述的化合物A、无机碱、碘甲烷或碘乙烷的摩尔比为:1:1~10:1~5;Wherein, the molar ratio of compound A, inorganic base, methyl iodide or ethyl iodide is: 1:1-10:1-5;
2)-10~15℃下,将TFA的氯代烃溶液加入至化合物B的氯代烃溶液中,混合液搅拌0.3~5小时,浓缩得到粗产品胺C,-10~15℃下,将化合物C溶于干燥的氯代烃溶液中,加入叔丁氧羰基保护的氨基酸、缩合剂和添加剂,然后加入有机碱调节反应液pH至碱性,混合液室温搅拌过夜,反应液依次用稀酸溶液、稀碱溶液、饱和食盐水洗涤,干燥,减压浓缩所得粗产品过柱纯化,得到无色油状物D;2) At -10-15°C, add the chlorinated hydrocarbon solution of TFA to the chlorinated hydrocarbon solution of compound B, stir the mixture for 0.3-5 hours, and concentrate to obtain the crude product amine C. At -10-15°C, add Dissolve compound C in a dry chlorinated hydrocarbon solution, add tert-butoxycarbonyl-protected amino acid, condensing agent and additives, then add an organic base to adjust the pH of the reaction solution to alkaline, stir the mixture at room temperature overnight, and then wash the reaction solution with dilute acid solution, dilute alkali solution, saturated brine, dried, and concentrated under reduced pressure to obtain a crude product that was purified by column to obtain a colorless oily substance D;
其中,所述的化合物C、叔丁氧羰基保护的氨基酸、缩合剂、添加剂的摩尔比为1:1~5:1~20:0.25~20;Wherein, the molar ratio of compound C, tert-butoxycarbonyl-protected amino acid, condensing agent and additive is 1:1-5:1-20:0.25-20;
3)将化合物D溶于极性有机溶剂和水的混合溶剂中,加入强碱,悬浮液室温搅拌2~7小时,浓缩,残留物用水稀释,用稀盐酸溶液调节pH值至酸性,水溶液用非极性有机溶剂萃取三次,合并有机相,干燥剂干燥,浓缩得到无色油状物E;3) Dissolve compound D in a mixed solvent of polar organic solvent and water, add a strong base, stir the suspension at room temperature for 2 to 7 hours, concentrate, dilute the residue with water, adjust the pH value to acidic with dilute hydrochloric acid solution, and use The non-polar organic solvent was extracted three times, the organic phases were combined, dried with a desiccant, and concentrated to obtain a colorless oil E;
其中,所述的化合物D、强碱的摩尔比为1:1~5;Wherein, the molar ratio of the compound D to the strong base is 1:1-5;
4)-10~15℃下,将化合物E溶于干燥氯代烃溶液中,加入有机碱或缩合剂和有机碱的混合氯代烃溶液,然后加入2-(4-(氯代甲氧基)苯基)乙腈或2-(4-(氯代甲氧基)苯基)甲基硝酸酯或2-(4-羟基苯基)乙腈或2-(4-羟基苯基)甲基硝酸酯,混合液在惰性气体保护下,室温搅拌过夜,浓缩得到粗产品F,-10~15℃,将TFA加入至化合物F的氯代烃溶液中,混合液搅拌0.1~5小时,浓缩,高效液相纯化,冷冻干燥,得到白色成品G;4) At -10-15°C, dissolve compound E in a dry chlorinated hydrocarbon solution, add an organic base or a mixed chlorinated hydrocarbon solution of a condensing agent and an organic base, and then add 2-(4-(chloromethoxy )phenyl)acetonitrile or 2-(4-(chloromethoxy)phenyl)methyl nitrate or 2-(4-hydroxyphenyl)acetonitrile or 2-(4-hydroxyphenyl)methyl nitrate , the mixed solution was stirred overnight at room temperature under the protection of an inert gas, and concentrated to obtain the crude product F. At -10 to 15°C, TFA was added to the chlorinated hydrocarbon solution of compound F, the mixed solution was stirred for 0.1 to 5 hours, concentrated, and the high-efficiency liquid Phase purification, freeze-drying to obtain white finished product G;
其中,所述的化合物E、2-(4-(氯代甲氧基)苯基)乙腈或2-(4-(氯代甲氧基)苯基)甲基硝酸酯或2-(4-羟基苯基)乙腈或2-(4-羟基苯基)甲基硝酸酯、有机碱、缩合剂的摩尔比为1:1~5:1~20:1~20。Wherein, the compound E, 2-(4-(chloromethoxy)phenyl)acetonitrile or 2-(4-(chloromethoxy)phenyl)methyl nitrate or 2-(4- The molar ratio of hydroxyphenyl) acetonitrile or 2-(4-hydroxyphenyl)methyl nitrate, organic base and condensing agent is 1:1~5:1~20:1~20.
优选的,上述的杂化抗癌药物的制备方法,所述的化合物A的结构通式为:其中,X为-SCH2-、-CH=CH-或-(CH2)2-中的一种。Preferably, in the preparation method of the above-mentioned hybrid anticancer drug, the general structural formula of the compound A is: Wherein, X is one of -SCH 2 -, -CH═CH- or -(CH 2 ) 2 -.
优选的,上述的杂化抗癌药物的制备方法,所述的无机碱为K2CO3、Na2CO3、KHCO3、NaHCO3、KOH、NaOH或LiOH中的一种或多种。Preferably, in the preparation method of the above-mentioned hybrid anticancer drug, the inorganic base is one or more of K 2 CO 3 , Na 2 CO 3 , KHCO 3 , NaHCO 3 , KOH, NaOH or LiOH.
优选的,上述的杂化抗癌药物的制备方法,所述的强碱为KOH、NaOH、Ca(OH)2、NaH、KH或LiOH中的一种或多种。Preferably, in the preparation method of the above-mentioned hybrid anticancer drug, the strong base is one or more of KOH, NaOH, Ca(OH) 2 , NaH, KH or LiOH.
优选的,上述的杂化抗癌药物的制备方法,所述的极性有机溶剂为DMF、DMSO、THF或MeCN中的一种或多种。Preferably, in the preparation method of the above-mentioned hybrid anticancer drug, the polar organic solvent is one or more of DMF, DMSO, THF or MeCN.
优选的,上述的杂化抗癌药物的制备方法,所述的非极性有机溶剂为乙酸乙酯、二氯甲烷、氯仿或乙醚中的一种或多种。Preferably, in the preparation method of the above-mentioned hybrid anticancer drug, the non-polar organic solvent is one or more of ethyl acetate, dichloromethane, chloroform or ether.
优选的,上述的杂化抗癌药物的制备方法,所述的惰性气体为氮气或氩气。Preferably, in the preparation method of the above-mentioned hybrid anticancer drug, the inert gas is nitrogen or argon.
优选的,上述的杂化抗癌药物的制备方法,所述的氯代烃溶液为二氯甲烷或氯仿。Preferably, in the preparation method of the above-mentioned hybrid anticancer drug, the chlorinated hydrocarbon solution is dichloromethane or chloroform.
优选的,上述的杂化抗癌药物的制备方法,所述的叔丁氧羰基保护的氨基酸为N-叔丁氧羰基-L-丙氨酸、(S)-2-(叔丁氧羰基)氨基丁酸、(S)-2-((叔丁氧羰基)甲基氨基)丙酸或(S)-2-((叔丁氧羰基)甲基氨基)丁酸中的一种或多种。Preferably, in the preparation method of the above-mentioned hybrid anticancer drug, the amino acid protected by the tert-butoxycarbonyl group is N-tert-butoxycarbonyl-L-alanine, (S)-2-(tert-butoxycarbonyl) One or more of aminobutyric acid, (S)-2-((tert-butoxycarbonyl)methylamino)propionic acid or (S)-2-((tert-butoxycarbonyl)methylamino)butanoic acid .
优选的,上述的杂化抗癌药物的制备方法,所述的缩合剂为BOP、DCC、EDCI、DIC、PyBOP、TBTU、HBTU、HATU或TATU中的一种或多种。Preferably, in the preparation method of the above hybrid anticancer drug, the condensing agent is one or more of BOP, DCC, EDCI, DIC, PyBOP, TBTU, HBTU, HATU or TATU.
优选的,上述的杂化抗癌药物的制备方法,所述的添加剂为HOBt、HOOBt或HOSu中的一种或多种。Preferably, in the preparation method of the above-mentioned hybrid anticancer drug, the additive is one or more of HOBt, HOOBt or HOSu.
优选的,上述的杂化抗癌药物的制备方法,所述的有机碱为三乙胺、吡啶、DBU、DIEA或N-甲基吗啉中的一种或多种。Preferably, in the preparation method of the above-mentioned hybrid anticancer drug, the organic base is one or more of triethylamine, pyridine, DBU, DIEA or N-methylmorpholine.
优选的,上述的杂化抗癌药物的制备方法,所述的干燥剂为无水硫酸镁、无水硫酸钠、无水碳酸钾或无水氯化钙中的一种。Preferably, in the preparation method of the above hybrid anticancer drug, the desiccant is one of anhydrous magnesium sulfate, anhydrous sodium sulfate, anhydrous potassium carbonate or anhydrous calcium chloride.
上述的杂化抗癌药物作为抗癌药物的应用。与现有技术相比,本发明的提供的技术方案与XIAP-BIR3的结合亲和力较强,非肽特征更加明显,且有望作用于多个抗癌靶点。The application of the above-mentioned hybrid anticancer drug as an anticancer drug. Compared with the prior art, the technical solution provided by the present invention has stronger binding affinity with XIAP-BIR3, more obvious non-peptide features, and is expected to act on multiple anti-cancer targets.
本发明相对于现有技术具有如下的优点及效果:Compared with the prior art, the present invention has the following advantages and effects:
本发明为了加强Smac模拟物的抗癌活性,用一个新的基团替代Smac模拟物碳端的疏水性基团,设计和合成了一类杂化抗癌药物。所引入的新基团不仅与凋亡抑制蛋白作用,还能在酯酶的水解作用下,生成醌的甲基化物。醌的甲基化物中间体高度亲电,可以参与多项生理过程,诱导细胞死亡以及抑制细胞生长。因此,该类杂化药物包括两个药效团:一个药效团与IAPs结合,拮抗IAPs对细胞凋亡的抑制作用;另一个药效团产生醌的甲基化物中间体,参与多项生理过程。因此,本发明所设计及合成的杂化抗癌药物与XIAP-BIR3的结合亲和力较强,非肽特征更加明显,可以作用于多个靶点,起着多重功效。In order to strengthen the anticancer activity of Smac mimics, the present invention replaces the hydrophobic group at the carbon end of Smac mimics with a new group, and designs and synthesizes a class of hybrid anticancer drugs. The introduced new group not only interacts with the apoptosis inhibitory protein, but also generates quinone methide under the hydrolysis of esterase. The methide intermediates of quinones are highly electrophilic and can participate in many physiological processes, inducing cell death and inhibiting cell growth. Therefore, this type of hybrid drug includes two pharmacophores: one pharmacophore binds to IAPs and antagonizes the inhibitory effect of IAPs on cell apoptosis; the other pharmacophore produces quinone methide intermediates and participates in multiple physiological process. Therefore, the hybrid anticancer drug designed and synthesized by the present invention has stronger binding affinity with XIAP-BIR3, more obvious non-peptide features, can act on multiple targets, and play multiple functions.
附图说明Description of drawings
图1是化合物G1的1H NMR检测谱图;Fig. 1 is the 1 H NMR detection spectrogram of compound G1;
图2是化合物G2的1H NMR检测谱图;Fig. 2 is the 1 H NMR detection spectrogram of compound G2;
图3是化合物G3的1H NMR检测谱图;Fig. 3 is the 1 H NMR detection spectrogram of compound G3;
图4是化合物G1与XIAP-BIR3竞争性结合抑制曲线;Figure 4 is a competitive binding inhibition curve between compound G 1 and XIAP-BIR3;
图5是化合物G1与TRAIL对MDA-MB-231细胞凋亡的协同作用。Fig. 5 shows the synergistic effect of compound G 1 and TRAIL on the apoptosis of MDA-MB-231 cells.
具体实施方式detailed description
下面结合具体实施方式,对本发明的权利要求做进一步的详细说明,但是不构成对本发明的任何限制,任何人在本发明权利要求保护范围内所做的有限次的修改,仍在本发明的权利要求保护范围之内。The claims of the present invention will be further described in detail below in conjunction with specific embodiments, but this does not constitute any restriction on the present invention. Anyone who makes limited modifications within the scope of the claims of the present invention is still within the rights of the present invention. within the scope of protection.
所有试剂未经特别说明,均为市售分析纯,无进一步纯化,直接使用。无水无氧反应的玻璃仪器在使用前,在烘箱中干燥,反应在Ar保护下进行。溶剂重蒸均在Ar保护下进行,THF在金属钠和二苯甲酮的条件下干燥,二氯甲烷、乙酸乙酯用氢化钙干燥。柱层析使用63~200目硅胶,薄层层析使用Merck TLC silica gel 60F254塑料色谱板,用254nm紫外光照、或碘蒸气、或2%茚三酮的乙醇溶液显色检测。核磁共振谱使用Bruker AVANCE III400NMR谱仪测定,化学位移值以ppm为单位记录。质谱使用LCT Premier XE型飞行时间质谱仪测定。旋光值用JASCO P-1010旋光仪测定。All reagents were commercially available analytically pure unless otherwise specified, and were used directly without further purification. The glass instruments for the anhydrous and oxygen-free reaction were dried in an oven before use, and the reaction was carried out under the protection of Ar. Solvent redistillation was carried out under the protection of Ar, THF was dried under the condition of metallic sodium and benzophenone, and dichloromethane and ethyl acetate were dried with calcium hydride. Use 63-200 mesh silica gel for column chromatography, and Merck TLC silica gel 60F254 plastic chromatographic plate for thin layer chromatography, and use 254nm ultraviolet light, iodine vapor, or 2% ethanol solution of ninhydrin for color detection. The nuclear magnetic resonance spectrum was measured using a Bruker AVANCE III400NMR spectrometer, and the chemical shift values were recorded in ppm. Mass spectra were determined using an LCT Premier XE time-of-flight mass spectrometer. Optical rotation values were measured with a JASCO P-1010 polarimeter.
高效液相色谱(HPLC)条件:(1)制备型HPLC:Perkin Elmer Series 200UV/VIS检测器;Perkin Elmer Series 200二相泵;真空除气器;Gilson FC203b馏分接收仪;(2)分析型HPLC:Perkin Elmer Series 225自动进样器;Perkin Elmer Series 220UV/VIS检测器;Perkin Elmer Series 200四相泵;真空除气器。流动相:(1)流动相A:水+0.045%TFA;(2)流动相B:10%水+90%乙腈+0.038%TFA。High performance liquid chromatography (HPLC) conditions: (1) Preparative HPLC: Perkin Elmer Series 200UV/VIS detector; Perkin Elmer Series 200 two-phase pump; vacuum degasser; Gilson FC203b fraction receiver; (2) Analytical HPLC : Perkin Elmer Series 225 autosampler; Perkin Elmer Series 220 UV/VIS detector; Perkin Elmer Series 200 four-phase pump; vacuum degasser. Mobile phase: (1) Mobile phase A: water+0.045% TFA; (2) Mobile phase B: 10% water+90% acetonitrile+0.038% TFA.
实施例1(杂化抗癌药物G1)Example 1 (hybrid anticancer drug G 1 )
化合物A1(A1的结构式见式Ⅱ中所示)的合成方法参照中国专利201610036840.2第[0046]至[0083]段的制备方法。The synthesis method of compound A 1 (the structural formula of A 1 is shown in formula II) refers to the preparation method in paragraphs [0046] to [0083] of Chinese patent 201610036840.2.
(5R,8S,10aR)-5-((叔丁氧甲酰胺基)-6-羰基硫杂氮杂卓[1,5]并吡咯烷[2,1-d]-8-羧酸甲酯(化合物B1)的制备:(5R,8S,10aR)-5-((tert-butoxycarboxamido)-6-carbonylthiazepine[1,5]pyrrolidine[2,1-d]-8-carboxylic acid methyl ester Preparation of (Compound B 1 ):
将化合物A1(36mg,0.10mmol)和K2CO3(69mg,0.50mmol)溶于DMF(2mL)中。悬浮液搅拌15分钟,然后加入碘甲烷(31μL,0.50mmol)。混合液在Ar保护下,室温搅拌8小时,浓缩,所得残留物溶于乙酸乙酯中。有机相用水洗涤,无水硫酸镁干燥,浓缩所得粗产品过柱纯化(环己烷/乙酸乙酯=3/1),得到无色油状物B1(28mg,78%),反应化学方程式见式Ⅱ所示。Compound A 1 (36 mg, 0.10 mmol) and K 2 CO 3 (69 mg, 0.50 mmol) were dissolved in DMF (2 mL). The suspension was stirred for 15 minutes, then iodomethane (31 μL, 0.50 mmol) was added. The mixture was stirred at room temperature for 8 hours under the protection of Ar, concentrated, and the resulting residue was dissolved in ethyl acetate. The organic phase was washed with water, dried over anhydrous magnesium sulfate, concentrated and the resulting crude product was purified by column (cyclohexane/ethyl acetate=3/1) to obtain a colorless oily substance B 1 (28mg, 78%), the reaction chemical equation is shown in Formula II shown.
1H NMR(400MHz,CDCl3):δ5.87(d,J=6.9Hz,1H),4.71-4.66(m,1H),4.61-4.56(m,1H),4.49(t,J=9.0Hz,1H),3.74(s,3H),2.96-2.88(m,2H),2.75-2.67(m,2H),2.43-2.36(m,1H),2.14-1.91(m,3H),1.80(dd,J=11.7,6.7Hz,1H),1.75-1.66(m,1H),1.40(s,9H);13C NMR(100MHz,CDCl3):δ173.29,170.41,154.97,80.06,59.67,56.82,56.34,52.63,38.43,31.40,30.49,28.64,27.04. 1 H NMR (400MHz, CDCl 3 ): δ5.87(d, J=6.9Hz, 1H), 4.71-4.66(m, 1H), 4.61-4.56(m, 1H), 4.49(t, J=9.0Hz ,1H),3.74(s,3H),2.96-2.88(m,2H),2.75-2.67(m,2H),2.43-2.36(m,1H),2.14-1.91(m,3H),1.80(dd , J=11.7, 6.7Hz, 1H), 1.75-1.66(m, 1H), 1.40(s, 9H); 13 C NMR (100MHz, CDCl 3 ): δ173.29, 170.41, 154.97, 80.06, 59.67, 56.82, 56.34 ,52.63,38.43,31.40,30.49,28.64,27.04.
(5R,8S,10aR)-5-((S)-2-(叔丁氧甲酰胺基)丙酰胺基)-6-羰基硫杂氮杂卓[1,5]并吡咯烷[2,1-d]-8-羧酸甲酯(化合物D1)的制备:(5R,8S,10aR)-5-((S)-2-(tert-butoxycarboxamido)propionamido)-6-carbonylthiazepine[1,5]pyrrolidine[2,1 -d] - Preparation of methyl 8-carboxylate (compound D 1 ):
-10℃下,将TFA(300μL)的二氯甲烷溶液(1mL)加入至化合物B1(28mg,0.08mmol)的二氯甲烷溶液(2mL)中。混合液搅拌5h,浓缩得到化合物胺C1。-10℃下,将所得的化合物C1溶于干燥的二氯甲烷(3mL)中,加入Boc-Ala-OH(15mg,0.08mmol)、EDCI(307mg,1.6mmol)、HOBt(216mg,1.6mmol),然后加入DIEA调节反应液至碱性。混合液室温搅拌过夜,反应液依次用稀盐酸溶液、饱和碳酸氢钠溶液、饱和食盐水洗涤。有机相用无水硫酸镁干燥,减压浓缩,所得粗产品过柱纯化(环己烷/丙酮=3/1),得到无色油状物D1(25mg,两步反应总产率73%),反应化学方程式见式Ⅲ。A solution of TFA (300 μL) in dichloromethane (1 mL) was added to a solution of compound B 1 (28 mg, 0.08 mmol) in dichloromethane (2 mL) at -10°C. The mixture was stirred for 5 h and concentrated to obtain compound amine C 1 . At -10°C, the obtained compound C 1 was dissolved in dry dichloromethane (3 mL), and Boc-Ala-OH (15 mg, 0.08 mmol), EDCI (307 mg, 1.6 mmol), HOBt (216 mg, 1.6 mmol) were added ), then add DIEA to adjust the reaction solution to alkaline. The mixture was stirred overnight at room temperature, and the reaction solution was washed successively with dilute hydrochloric acid solution, saturated sodium bicarbonate solution and saturated brine. The organic phase was dried over anhydrous magnesium sulfate, concentrated under reduced pressure, and the resulting crude product was purified by column (cyclohexane/acetone=3/1) to obtain a colorless oil D 1 (25 mg, the total yield of the two-step reaction was 73%) , the reaction chemical equation is shown in formula Ⅲ.
1H NMR(400MHz,CDCl3):δ7.33(d,J=4.2Hz,1H),5.02(d,J=6.1Hz,1H),4.81-4.76(m,1H),4.72-4.67(m,1H),4.49(t,J=9.0Hz,1H),4.19-4.05(m,1H),3.74(s,3H),2.98-2.86(m,2H),2.76-2.65(m,2H),2.44-2.37(m,1H),2.15-1.92(m,3H),1.81(dd,J=11.8,6.8Hz,1H),1.72(tt,J=13.9,4.5Hz,1H),1.42(s,9H),1.32(d,J=7.1Hz,3H);13CNMR(100MHz,CDCl3):δ173.18,171.85,169.90,155.52,80.38,59.72,56.39,55.76,52.67,50.63,38.01,37.09,31.54,31.38,28.62,27.02,19.13. 1 H NMR (400MHz, CDCl 3 ): δ7.33(d, J=4.2Hz, 1H), 5.02(d, J=6.1Hz, 1H), 4.81-4.76(m, 1H), 4.72-4.67(m ,1H),4.49(t,J=9.0Hz,1H),4.19-4.05(m,1H),3.74(s,3H),2.98-2.86(m,2H),2.76-2.65(m,2H), 2.44-2.37(m,1H),2.15-1.92(m,3H),1.81(dd,J=11.8,6.8Hz,1H),1.72(tt,J=13.9,4.5Hz,1H),1.42(s, 9H), 1.32 (d, J=7.1Hz, 3H); 13 CNMR (100MHz, CDCl 3 ): δ173.18, 171.85, 169.90, 155.52, 80.38, 59.72, 56.39, 55.76, 52.67, 50.63, 38.01, 37.09, 31.54, 31.38, 28.62, 27.02, 19.13.
(5R,8S,10aR)-5-((S)-2-(叔丁氧甲酰胺基)丙酰胺基)-6-羰基硫杂氮杂卓[1,5]并吡咯烷[2,1-d]-8-羧酸(化合物E1)的制备:(5R,8S,10aR)-5-((S)-2-(tert-butoxycarboxamido)propionamido)-6-carbonylthiazepine[1,5]pyrrolidine[2,1 Preparation of -d]-8-carboxylic acid (compound E 1 ):
将化合物D1(25mg,0.06mmol)溶于MeCN/H2O(1:1,2mL)的混合溶剂中,加入KOH(3.3mg,0.06mmol)。悬浮液室温搅拌2小时,浓缩,残留物用水稀释,用稀盐酸溶液调节pH值至2。水溶液用乙酸乙酯萃取三次,合并有机相,无水硫酸镁干燥,浓缩得到无色油状物E1(23mg,95%)。无需进一步纯化,直接进行下一步反应。反应化学方程式见式Ⅳ。Compound D 1 (25 mg, 0.06 mmol) was dissolved in a mixed solvent of MeCN/H 2 O (1:1, 2 mL), and KOH (3.3 mg, 0.06 mmol) was added. The suspension was stirred at room temperature for 2 hours, concentrated, the residue was diluted with water, and the pH was adjusted to 2 with dilute hydrochloric acid solution. The aqueous solution was extracted three times with ethyl acetate, the organic phases were combined, dried over anhydrous magnesium sulfate, and concentrated to obtain a colorless oil E 1 (23 mg, 95%). The next reaction was carried out directly without further purification. The reaction chemical equation is shown in Formula IV.
1H NMR(400MHz,MeOD):δ4.84(dd,J=10.1,2.3Hz,1H),4.76-4.71(m,1H),4.48(t,J=8.8Hz,1H),4.08(q,J=7.2Hz,1H),2.98-2.72(m,4H),2.49-2.43(m,1H),2.20-2.00(m,3H),1.86(dd,J=11.1,6.1Hz,1H),1.80-1.72(m,1H),1.46(s,9H),1.33(d,J=7.2Hz,3H);13C NMR(100MHz,MeOD):δ177.10,175.63,172.01,158.56,81.59,62.07,58.77,57.62,52.57,38.94,38.71,32.69,32.16,29.55,28.76,18.87. 1 H NMR (400MHz, MeOD): δ4.84(dd, J=10.1, 2.3Hz, 1H), 4.76-4.71(m, 1H), 4.48(t, J=8.8Hz, 1H), 4.08(q, J=7.2Hz, 1H), 2.98-2.72(m, 4H), 2.49-2.43(m, 1H), 2.20-2.00(m, 3H), 1.86(dd, J=11.1, 6.1Hz, 1H), 1.80 -1.72(m,1H),1.46(s,9H),1.33(d,J=7.2Hz,3H); 13 C NMR(100MHz,MeOD):δ177.10,175.63,172.01,158.56,81.59,62.07,58.77, 57.62, 52.57, 38.94, 38.71, 32.69, 32.16, 29.55, 28.76, 18.87.
(5R,8S,10aR)-(4-(氰甲基)苯氧基)甲基5-((S)-2-氨基丙酰胺基)-6-羰基硫杂氮杂卓[1,5]并吡咯烷[2,1-d]-8-羧酸酯三氟乙酸盐(G1)的制备:(5R,8S,10aR)-(4-(cyanomethyl)phenoxy)methyl 5-((S)-2-aminopropionamido)-6-carbonylthiazepine[1,5] Preparation of pyrrolidine[2,1-d]-8-carboxylate trifluoroacetate (G 1 ):
-10℃下,将化合物E1(23mg,0.06mmol)溶于干燥二氯甲烷溶液(3mL)中,加入三乙胺(8μL,0.06mmol),然后加入2-(4-(氯代甲氧基)苯基)乙腈(11mg,0.06mmol)的干燥二氯甲烷溶液(2mL)。混合液在Ar保护下室温搅拌过夜,浓缩得到粗产品F 1。-10℃下,将化合物F1溶于二氯甲烷(2mL)中,加入TFA(300μL)的二氯甲烷溶液(1mL),混合液搅拌5小时,浓缩所得残留物经HPLC纯化,冷冻干燥,得到白色固体G1(7.8mg,两步总产率23%)。反应化学方程式见式Ⅴ。化合物G1的1H NMR检测谱图如图1所示。At -10°C, compound E 1 (23mg, 0.06mmol) was dissolved in dry dichloromethane solution (3mL), triethylamine (8μL, 0.06mmol) was added, and then 2-(4-(chloromethoxy (1) phenyl) acetonitrile (11 mg, 0.06 mmol) in dry dichloromethane (2 mL). The mixture was stirred overnight at room temperature under the protection of Ar, and concentrated to obtain the crude product F 1 . Compound F1 was dissolved in dichloromethane ( 2 mL) at -10°C, TFA (300 μL) in dichloromethane solution (1 mL) was added, the mixture was stirred for 5 hours, the resulting residue was concentrated, purified by HPLC, and lyophilized. A white solid G 1 was obtained (7.8 mg, 23% over two steps). The reaction chemical equation is shown in Formula V. The 1 H NMR detection spectrum of compound G 1 is shown in FIG. 1 .
1H NMR(400MHz,D2O):δ7.27(d,J=8.8Hz,2H),7.01(d,J=8.8Hz,2H),5.84,5.76(ABq,J=6.8Hz,2H),4.49-4.44(m,1H),4.35(t,J=9.1Hz,1H),3.97(q,J=7.1Hz,1H),3.76(s,2H),2.76(dd,J=14.1,3.0Hz,1H),2.67(dt,J=15.6,4.5Hz,1H),2.32-2.24(m,3H),2.07-1.97(m,1H),1.93-1.83(m,1H),1.72-1.62(m,3H),1.36(d,J=7.1Hz,3H);13CNMR(100MHz,D2O):δ172.82,172.77,170.92,170.88,169.81,169.77,155.11,155.05,129.72,129.67,125.71,125.63,120.19,120.13,117.22,117.14,86.23,86.15,60.62,60.57,57.94,57.88,54.70,54.65,48.91,48.83,35.94,35.88,34.73,34.66,30.89,30.83,29.48,29.42,26.47,26.41,22.03,21.98,16.44,16.39;MS(ESI):m/z 461.2(M+H)+;HR ESI MS for C22H29N4O5S required 461.1859,found:461.1880. 1 H NMR (400MHz, D 2 O): δ7.27 (d, J = 8.8Hz, 2H), 7.01 (d, J = 8.8Hz, 2H), 5.84, 5.76 (ABq, J = 6.8Hz, 2H) ,4.49-4.44(m,1H),4.35(t,J=9.1Hz,1H),3.97(q,J=7.1Hz,1H),3.76(s,2H),2.76(dd,J=14.1,3.0 Hz,1H),2.67(dt,J=15.6,4.5Hz,1H),2.32-2.24(m,3H),2.07-1.97(m,1H),1.93-1.83(m,1H),1.72-1.62( m,3H),1.36(d,J=7.1Hz,3H); 13 CNMR(100MHz,D 2 O):δ172.82,172.77,170.92,170.88,169.81,169.77,155.11,155.05,129.72,129.67,125.71,125.63 ,120.19,120.13,117.22,117.14,86.23,86.15,60.62,60.57,57.94,57.88,54.70,54.65,48.91,48.83,35.94,35.88,34.73,34.66,30.89,30.83,29.48,29.42,26.47,26.41,22.03 , 21.98, 16.44, 16.39; MS (ESI): m/z 461.2 (M+H) + ; HR ESI MS for C 22 H 29 N 4 O 5 S required 461.1859, found: 461.1880.
实施例2(杂化抗癌药物G2)Example 2 (hybrid anticancer drug G 2 )
化合物A2(A2的结构式见式Ⅵ中所示)的合成方法参照Duggan,H.M.等人在Organic&biomolecular chemistry(《有机和生物分子化学》)杂志2005年第3期2287页报道的方法。The synthesis method of compound A 2 (the structural formula of A 2 is shown in formula VI) refers to the method reported by Duggan, HM et al. in Organic & biomolecular chemistry ("Organic and Biomolecular Chemistry"), Issue 3, 2005, page 2287.
(3S,6S,10aR)-6-(叔丁氧甲酰胺基)-5-羰基-1,2,3,5,6,7,10,10a-八氢吡咯并[1,2-a]氮杂环辛烯-3-羧酸乙酯(化合物B2)的制备:(3S,6S,10aR)-6-(tert-butoxycarboxamido)-5-carbonyl-1,2,3,5,6,7,10,10a-octahydropyrrolo[1,2-a] Preparation of ethyl azacyclooctene-3-carboxylate (compound B 2 ):
将化合物A2(32mg,0.10mmol)和Na2CO3(106mg,1.00mmol)溶于DMSO(2mL)中。悬浮液搅拌30分钟,然后加入碘乙烷(8μL,0.10mmol)。混合液在N2保护下,室温搅拌4小时,浓缩,所得残留物溶于二氯甲烷中。有机相用水洗涤,无水硫酸钠干燥,浓缩所得粗产品过柱纯化(环己烷/乙酸乙酯=6/1),得到无色油状物B2(25mg,72%)。反应化学方程式见式Ⅵ。Compound A 2 (32 mg, 0.10 mmol) and Na 2 CO 3 (106 mg, 1.00 mmol) were dissolved in DMSO (2 mL). The suspension was stirred for 30 minutes, then ethyl iodide (8 μL, 0.10 mmol) was added. The mixture was stirred at room temperature for 4 hours under N 2 protection, concentrated, and the resulting residue was dissolved in dichloromethane. The organic phase was washed with water, dried over anhydrous sodium sulfate, and the crude product was concentrated and purified by column (cyclohexane/ethyl acetate=6/1) to obtain a colorless oil B 2 (25 mg, 72%). The reaction chemical equation is shown in Formula VI.
1H NMR(400MHz,CDCl3):δ5.83-5.72(m,1H),5.72-5.62(m,1H),5.56(d,J=7.5Hz,1H),4.86-4.76(m,1H),4.50-4.39(m,1H),4.12(q,J=7.1Hz,3H,containing 1H),2.76-2.70(m,2H),2.45-2.33(m,1H),2.32-2.19(m,1H),2.15-2.06(m,1H),2.06-1.98(m,1H),1.98-1.82(m,2H),1.39(s,9H),1.22(t,J=7.1Hz,3H);13C NMR(100MHz,CDCl3):δ171.89,171.05,155.23,129.32,125.92,79.58,60.97,60.38,58.74,51.91,35.37,33.03,32.97,28.42(3C),27.29,14.21. 1 H NMR (400MHz, CDCl 3 ): δ5.83-5.72(m, 1H), 5.72-5.62(m, 1H), 5.56(d, J=7.5Hz, 1H), 4.86-4.76(m, 1H) ,4.50-4.39(m,1H),4.12(q,J=7.1Hz,3H,containing 1H),2.76-2.70(m,2H),2.45-2.33(m,1H),2.32-2.19(m,1H ), 2.15-2.06(m, 1H), 2.06-1.98(m, 1H), 1.98-1.82(m, 2H), 1.39(s, 9H), 1.22(t, J=7.1Hz, 3H); 13C NMR (100MHz, CDCl3): δ171.89, 171.05, 155.23, 129.32, 125.92, 79.58, 60.97, 60.38, 58.74, 51.91, 35.37, 33.03, 32.97, 28.42 (3C), 27.29, 14.21.
(3S,6S,10aR)-6-((S)-2-(叔丁氧甲酰胺基)丙酰胺基)-5-羰基-1,2,3,5,6,7,10,10a-八氢吡咯并[1,2-a]氮杂环辛烯-3-羧酸乙酯(化合物D2)的制备:(3S,6S,10aR)-6-((S)-2-(tert-butoxycarboxamido)propionylamino)-5-carbonyl-1,2,3,5,6,7,10,10a- Preparation of ethyl octahydropyrrolo[1,2-a]azacyclooctene-3-carboxylate (compound D 2 ):
0℃下,将TFA(300μL)的二氯甲烷溶液(1mL)加入至化合物B2(28mg,0.08mmol)的二氯甲烷溶液(2mL)中。混合液搅拌2.5h,浓缩得到化合物胺C2。0℃下,将所得的化合物C2溶于干燥的二氯甲烷(3mL)中,加入Boc-Ala-OH(38mg,0.20mmol)、BOP(35mg,0.08mmol)、HOOBt(3mg,0.02mmol),然后加入NEt3调节反应液至碱性。混合液室温搅拌过夜,反应液依次用饱和氯化铵溶液、饱和碳酸氢钾溶液、饱和食盐水洗涤。有机相用无水硫酸钠干燥,减压浓缩,所得粗产品过柱纯化(环己烷/乙酸乙酯=5/1),得到无色油状物D2(26mg,两步反应总产率77%)。反应化学方程式见式Ⅶ。A solution of TFA (300 μL) in dichloromethane (1 mL) was added to a solution of compound B 2 (28 mg, 0.08 mmol) in dichloromethane (2 mL) at 0 °C. The mixture was stirred for 2.5 h and concentrated to obtain compound amine C 2 . At 0°C, the obtained compound C2 was dissolved in dry dichloromethane ( 3 mL), and Boc-Ala-OH (38 mg, 0.20 mmol), BOP (35 mg, 0.08 mmol), HOOBt (3 mg, 0.02 mmol) were added , and then add NEt 3 to adjust the reaction solution to alkaline. The mixture was stirred overnight at room temperature, and the reaction solution was washed successively with saturated ammonium chloride solution, saturated potassium bicarbonate solution and saturated brine. The organic phase was dried over anhydrous sodium sulfate, concentrated under reduced pressure, and the obtained crude product was purified by column (cyclohexane/ethyl acetate=5/1) to obtain colorless oily substance D 2 (26 mg, total yield of two-step reaction 77 %). The reaction chemical equation is shown in Formula VII.
1H NMR(400MHz,CDCl3):δ7.06(d,J=5.7Hz,1H),5.93-5.78(m,1H),5.78-5.62(m,1H),5.13-4.90(m,2H),4.46(dd,J=8.9,3.9Hz,1H),4.28-4.05(m,4H),2.87-2.66(m,2H),2.54-2.38(m,1H),2.38-2.24(m,1H),2.24-2.08(m,1H),2.08-1.82(m,3H),1.43(s,9H),1.33(d,J=7.0Hz,3H),1.26(t,J=7.1Hz,3H). 1 H NMR (400MHz, CDCl 3 ): δ7.06(d, J=5.7Hz, 1H), 5.93-5.78(m, 1H), 5.78-5.62(m, 1H), 5.13-4.90(m, 2H) ,4.46(dd,J=8.9,3.9Hz,1H),4.28-4.05(m,4H),2.87-2.66(m,2H),2.54-2.38(m,1H),2.38-2.24(m,1H) ,2.24-2.08(m,1H),2.08-1.82(m,3H),1.43(s,9H),1.33(d,J=7.0Hz,3H),1.26(t,J=7.1Hz,3H).
(3S,6S,10aR)-6-((S)-2-(叔丁氧甲酰胺基)丙酰胺基)-5-羰基-1,2,3,5,6,7,10,10a-八氢吡咯并[1,2-a]氮杂环辛烯-3-羧酸(化合物E2)的制备:(3S,6S,10aR)-6-((S)-2-(tert-butoxycarboxamido)propionylamino)-5-carbonyl-1,2,3,5,6,7,10,10a- Preparation of Octahydropyrrolo[1,2-a]azacyclooctene-3-carboxylic acid (Compound E 2 ):
将化合物D2(25mg,0.06mmol)溶于THF/H2O(1:1,2mL)的混合溶剂中,加入LiOH(4.3mg,0.18mmol)。悬浮液室温搅拌4.5小时,浓缩,残留物用水稀释,用稀盐酸溶液调节PH值至2。水溶液用二氯甲烷萃取三次,合并有机相,无水硫酸钠干燥,浓缩得到无色油状物E2(22mg,93%)。无需进一步纯化,直接进行下一步反应。反应化学方程式见式Ⅷ。Compound D 2 (25 mg, 0.06 mmol) was dissolved in a mixed solvent of THF/H 2 O (1:1, 2 mL), and LiOH (4.3 mg, 0.18 mmol) was added. The suspension was stirred at room temperature for 4.5 hours, concentrated, the residue was diluted with water, and the pH was adjusted to 2 with dilute hydrochloric acid solution. The aqueous solution was extracted three times with dichloromethane, the organic phases were combined, dried over anhydrous sodium sulfate, and concentrated to obtain a colorless oil E 2 (22 mg, 93%). The next reaction was carried out directly without further purification. The reaction chemical equation is shown in Formula VIII.
1H NMR(400MHz,CDCl3):δ9.55(bs,1H),7.63(bs,1H),7.50(bs,1H),5.96-5.62(m,2H),5.35-5.14(m,1H),4.71-4.45(m,1H),4.33-4.08(m,2H),3.00-2.70(m,2H),2.54-2.32(m,1H),2.32-2.14(m,2H),2.14-1.98(m,2H),1.98-1.84(m,1H),1.44(d,J=5.0Hz,9H),1.37(dd,J=6.9,3.5Hz,3H);13C NMR(100MHz,CDCl3):δ172.33,155.85,129.25,125.94,80.54,60.73,59.29,50.52,49.93,34.59,33.07,32.78,28.46,26.59,19.56,14.33. 1 H NMR (400MHz, CDCl 3 ): δ9.55(bs,1H),7.63(bs,1H),7.50(bs,1H),5.96-5.62(m,2H),5.35-5.14(m,1H) ,4.71-4.45(m,1H),4.33-4.08(m,2H),3.00-2.70(m,2H),2.54-2.32(m,1H),2.32-2.14(m,2H),2.14-1.98( m, 2H), 1.98-1.84 (m, 1H), 1.44 (d, J=5.0Hz, 9H), 1.37 (dd, J=6.9, 3.5Hz, 3H); 13 C NMR (100MHz, CDCl 3 ): δ172.33, 155.85, 129.25, 125.94, 80.54, 60.73, 59.29, 50.52, 49.93, 34.59, 33.07, 32.78, 28.46, 26.59, 19.56, 14.33.
(3S,6S,10aR)-(4-乙氰基苯基)-6-((S)-2-氨基丙酰胺基)-5-羰基-1,2,3,5,6,7,10,10a-八氢吡咯并[1,2-a]氮杂环辛烷-3-羧酸酯三氟乙酸盐(G2)的制备:(3S,6S,10aR)-(4-ethylcyanophenyl)-6-((S)-2-aminopropionamido)-5-carbonyl-1,2,3,5,6,7,10 , Preparation of 10a-octahydropyrrolo[1,2-a]azacycloctane-3-carboxylate trifluoroacetate (G 2 ):
0℃下,将化合物E2(22mg,0.06mmol)溶于干燥的氯仿(5mL)中,加入EDCI(115mg,0.60mmol)和DIEA(99μL,0.60mmol)的混合氯仿溶液,然后加入2-(4-羟基苯基)乙腈(24mg,0.18mmol),混合液室温搅拌过夜。减压抽干溶剂,得到淡黄色油状物F2。将F2溶于氯仿(3mL),冷至0℃,滴加TFA(0.5mL),2.5h后,蒸干溶剂,浓缩所得残留物经HPLC纯化,冷冻干燥,得到白色固体G2(3.1mg,两步反应总产率10%)。反应化学方程式见式Ⅸ。化合物G2的1HNMR检测谱图如图2所示。At 0°C, compound E 2 (22 mg, 0.06 mmol) was dissolved in dry chloroform (5 mL), a mixed chloroform solution of EDCI (115 mg, 0.60 mmol) and DIEA (99 μL, 0.60 mmol) was added, and then 2-( 4-Hydroxyphenyl) acetonitrile (24 mg, 0.18 mmol), and the mixture was stirred at room temperature overnight. The solvent was dried under reduced pressure to obtain F 2 as a pale yellow oil. F2 was dissolved in chloroform (3mL), cooled to 0 °C, TFA (0.5mL) was added dropwise, after 2.5h, the solvent was evaporated to dryness, the residue was concentrated, purified by HPLC, and freeze-dried to obtain a white solid G2 ( 3.1mg , the total yield of the two-step reaction was 10%). The reaction chemical equation is shown in Formula IX. The 1 HNMR detection spectrum of compound G 2 is shown in FIG. 2 .
1H NMR(400MHz,CDCl3):δ7.70(bs,1H),7.32(d,J=8.3Hz,2H),7.07(d,J=8.3Hz,2H),5.85-5.51(m,2H),5.16-5.04(m,1H),4.64(d,J=5.9Hz,1H),4.33-4.16(m,1H),4.16-3.99(m,1H),3.72(s,2H),2.86-2.59(d,J=14.8Hz,2H),2.51-2.34(m,1H),2.25-2.20(m,2H),2.20-2.07(m,3H),2.06-1.90(m,2H),1.55-1.43(m,3H).MS(ESI):m/z 411.2(M+H)+;HR ESI MS for C22H27N4O4required 411.1954,found:411.1932. 1 H NMR (400MHz, CDCl 3 ): δ7.70(bs, 1H), 7.32(d, J=8.3Hz, 2H), 7.07(d, J=8.3Hz, 2H), 5.85-5.51(m, 2H ),5.16-5.04(m,1H),4.64(d,J=5.9Hz,1H),4.33-4.16(m,1H),4.16-3.99(m,1H),3.72(s,2H),2.86- 2.59(d, J=14.8Hz, 2H), 2.51-2.34(m, 1H), 2.25-2.20(m, 2H), 2.20-2.07(m, 3H), 2.06-1.90(m, 2H), 1.55- 1.43(m,3H). MS(ESI): m/z 411.2(M+H) + ; HR ESI MS for C 22 H 27 N 4 O 4 required 411.1954, found: 411.1932.
实施例3(杂化抗癌药物G3)Example 3 (hybrid anticancer drug G 3 )
化合物A2(A2的结构式见式Ⅹ中所示)的合成方法参照Duggan,H.M.等人在Organic&biomolecular chemistry(《有机和生物分子化学》)杂志2005年第3期2287页报道的方法。The synthesis method of compound A 2 (the structural formula of A 2 is shown in formula X) refers to the method reported by Duggan, HM et al. in Organic & biomolecular chemistry ("Organic and Biomolecular Chemistry"), No. 3, 2005, page 2287.
(3S,6S,10aR)-6-(叔丁氧甲酰胺基)-5-羰基-1,2,3,5,6,7,10,10a-八氢吡咯并[1,2-a]氮杂环辛烯-3-羧酸乙酯(化合物B2)的制备:(3S,6S,10aR)-6-(tert-butoxycarboxamido)-5-carbonyl-1,2,3,5,6,7,10,10a-octahydropyrrolo[1,2-a] Preparation of ethyl azacyclooctene-3-carboxylate (compound B 2 ):
将化合物A2(32mg,0.10mmol)和KOH(6mg,0.10mmol)溶于THF(2mL)中。悬浮液搅拌1分钟,然后加入碘乙烷(20μL,0.25mmol)。混合液在N2保护下,室温搅拌12小时,浓缩,所得残留物溶于氯仿中。有机相用水洗涤,无水碳酸钾干燥,浓缩所得粗产品过柱纯化(环己烷/乙酸乙酯=6/1),得到无色油状物B2(29mg,82%)。反应化学方程式见式Ⅹ。Compound A 2 (32 mg, 0.10 mmol) and KOH (6 mg, 0.10 mmol) were dissolved in THF (2 mL). The suspension was stirred for 1 min, then ethyl iodide (20 μL, 0.25 mmol) was added. The mixture was stirred at room temperature for 12 hours under N 2 protection, concentrated, and the obtained residue was dissolved in chloroform. The organic phase was washed with water, dried over anhydrous potassium carbonate, and the crude product was concentrated and purified by column (cyclohexane/ethyl acetate=6/1) to obtain a colorless oil B 2 (29 mg, 82%). The reaction chemical equation is shown in Formula X.
1H NMR(400MHz,CDCl3):δ5.83-5.72(m,1H),5.72-5.62(m,1H),5.56(d,J=7.5Hz,1H),4.86-4.76(m,1H),4.50-4.39(m,1H),4.12(q,J=7.1Hz,3H,containing 1H),2.76-2.70(m,2H),2.45-2.33(m,1H),2.32-2.19(m,1H),2.15-2.06(m,1H),2.06-1.98(m,1H),1.98-1.82(m,2H),1.39(s,9H),1.22(t,J=7.1Hz,3H);13C NMR(100MHz,CDCl3):δ171.89,171.05,155.23,129.32,125.92,79.58,60.97,60.38,58.74,51.91,35.37,33.03,32.97,28.42(3C),27.29,14.21. 1 H NMR (400MHz, CDCl 3 ): δ5.83-5.72(m, 1H), 5.72-5.62(m, 1H), 5.56(d, J=7.5Hz, 1H), 4.86-4.76(m, 1H) ,4.50-4.39(m,1H),4.12(q,J=7.1Hz,3H,containing 1H),2.76-2.70(m,2H),2.45-2.33(m,1H),2.32-2.19(m,1H ), 2.15-2.06(m, 1H), 2.06-1.98(m, 1H), 1.98-1.82(m, 2H), 1.39(s, 9H), 1.22(t, J=7.1Hz, 3H); 13C NMR (100MHz, CDCl3): δ171.89, 171.05, 155.23, 129.32, 125.92, 79.58, 60.97, 60.38, 58.74, 51.91, 35.37, 33.03, 32.97, 28.42 (3C), 27.29, 14.21.
(3S,6S,10aR)-6-((S)-2-(叔丁氧甲酰胺基)丙酰胺基)-5-羰基-1,2,3,5,6,7,10,10a-八氢吡咯并[1,2-a]氮杂环辛烯-3-羧酸乙酯(化合物D2)的制备:(3S,6S,10aR)-6-((S)-2-(tert-butoxycarboxamido)propionylamino)-5-carbonyl-1,2,3,5,6,7,10,10a- Preparation of ethyl octahydropyrrolo[1,2-a]azacyclooctene-3-carboxylate (compound D 2 ):
15℃下,将TFA(300μL)的氯仿溶液(1mL)加入至化合物B2(28mg,0.08mmol)的氯仿溶液(2mL)中。混合液搅拌0.3h,浓缩得到化合物胺C2。15℃下,将所得的化合物C2溶于干燥的氯仿(3mL)中,加入Boc-Ala-OH(76mg,0.40mmol)、DCC(165mg,0.80mmol)、HOSu(92mg,0.80mmol),然后加入DBU调节反应液pH至碱性。混合液室温搅拌过夜,反应液依次用饱和氯化铵溶液、饱和碳酸氢钾溶液、饱和食盐水洗涤。有机相用无水硫酸钠干燥,减压浓缩,所得粗产品过柱纯化(环己烷/乙酸乙酯=5/1),得到无色油状物D2(23mg,两步反应总产率68%)。反应化学方程式见式Ⅺ。A chloroform solution (1 mL) of TFA (300 μL) was added to a chloroform solution (2 mL) of compound B 2 (28 mg, 0.08 mmol) at 15°C. The mixture was stirred for 0.3 h and concentrated to obtain compound amine C 2 . At 15°C, the obtained compound C2 was dissolved in dry chloroform ( 3 mL), and Boc-Ala-OH (76 mg, 0.40 mmol), DCC (165 mg, 0.80 mmol), HOSu (92 mg, 0.80 mmol) were added, and then Add DBU to adjust the pH of the reaction solution to alkaline. The mixture was stirred overnight at room temperature, and the reaction solution was washed successively with saturated ammonium chloride solution, saturated potassium bicarbonate solution and saturated brine. The organic phase was dried over anhydrous sodium sulfate and concentrated under reduced pressure. The obtained crude product was purified by column (cyclohexane/ethyl acetate=5/1) to obtain a colorless oily substance D 2 (23 mg, the total yield of the two-step reaction was 68 %). The reaction chemical equation is shown in formula Ⅺ.
1H NMR(400MHz,CDCl3):δ7.06(d,J=5.7Hz,1H),5.93-5.78(m,1H),5.78-5.62(m,1H),5.13-4.90(m,2H),4.46(dd,J=8.9,3.9Hz,1H),4.28-4.05(m,4H),2.87-2.66(m,2H),2.54-2.38(m,1H),2.38-2.24(m,1H),2.24-2.08(m,1H),2.08-1.82(m,3H),1.43(s,9H),1.33(d,J=7.0Hz,3H),1.26(t,J=7.1Hz,3H). 1 H NMR (400MHz, CDCl 3 ): δ7.06(d, J=5.7Hz, 1H), 5.93-5.78(m, 1H), 5.78-5.62(m, 1H), 5.13-4.90(m, 2H) ,4.46(dd,J=8.9,3.9Hz,1H),4.28-4.05(m,4H),2.87-2.66(m,2H),2.54-2.38(m,1H),2.38-2.24(m,1H) ,2.24-2.08(m,1H),2.08-1.82(m,3H),1.43(s,9H),1.33(d,J=7.0Hz,3H),1.26(t,J=7.1Hz,3H).
(3S,6S,10aR)-6-((S)-2-(叔丁氧甲酰胺基)丙酰胺基)-5-羰基-1,2,3,5,6,7,10,10a-八氢吡咯并[1,2-a]氮杂环辛烯-3-羧酸(化合物E2)的制备:(3S,6S,10aR)-6-((S)-2-(tert-butoxycarboxamido)propionylamino)-5-carbonyl-1,2,3,5,6,7,10,10a- Preparation of Octahydropyrrolo[1,2-a]azacyclooctene-3-carboxylic acid (Compound E 2 ):
将化合物D2(25mg,0.06mmol)溶于MeCN/H2O(1:1,2mL)的混合溶剂中,加入NaOH(12mg,0.30mmol)。悬浮液室温搅拌7小时,浓缩,残留物用水稀释,用稀盐酸溶液调节pH值至2。水溶液用氯仿萃取三次,合并有机相,无水碳酸钾干燥,浓缩得到无色油状物E2(20mg,84%)。无需进一步纯化,直接进行下一步反应。反应化学方程式见式Ⅻ。Compound D 2 (25 mg, 0.06 mmol) was dissolved in a mixed solvent of MeCN/H 2 O (1:1, 2 mL), and NaOH (12 mg, 0.30 mmol) was added. The suspension was stirred at room temperature for 7 hours, concentrated, the residue was diluted with water, and the pH was adjusted to 2 with dilute hydrochloric acid solution. The aqueous solution was extracted three times with chloroform, the organic phases were combined, dried over anhydrous potassium carbonate, and concentrated to obtain a colorless oil E 2 (20 mg, 84%). The next reaction was carried out directly without further purification. The reaction chemical equation is shown in Formula XII.
1H NMR(400MHz,CDCl3):δ9.55(bs,1H),7.63(bs,1H),7.50(bs,1H),5.96-5.62(m,2H),5.35-5.14(m,1H),4.71-4.45(m,1H),4.33-4.08(m,2H),3.00-2.70(m,2H),2.54-2.32(m,1H),2.32-2.14(m,2H),2.14-1.98(m,2H),1.98-1.84(m,1H),1.44(d,J=5.0Hz,9H),1.37(dd,J=6.9,3.5Hz,3H);13C NMR(100MHz,CDCl3):δ172.33,155.85,129.25,125.94,80.54,60.73,59.29,50.52,49.93,34.59,33.07,32.78,28.46,26.59,19.56,14.33. 1 H NMR (400MHz, CDCl 3 ): δ9.55(bs,1H),7.63(bs,1H),7.50(bs,1H),5.96-5.62(m,2H),5.35-5.14(m,1H) ,4.71-4.45(m,1H),4.33-4.08(m,2H),3.00-2.70(m,2H),2.54-2.32(m,1H),2.32-2.14(m,2H),2.14-1.98( m, 2H), 1.98-1.84 (m, 1H), 1.44 (d, J=5.0Hz, 9H), 1.37 (dd, J=6.9, 3.5Hz, 3H); 13 C NMR (100MHz, CDCl 3 ): δ172.33, 155.85, 129.25, 125.94, 80.54, 60.73, 59.29, 50.52, 49.93, 34.59, 33.07, 32.78, 28.46, 26.59, 19.56, 14.33.
(3S,6S,10aR)-(4-硝酸酯亚甲基苯基)-6-((S)-2-氨基丙酰胺基)-5-羰基-1,2,3,5,6,7,10,10a-八氢吡咯并[1,2-a]氮杂环辛烷-3-羧酸酯三氟乙酸盐(G3)的制备:(3S,6S,10aR)-(4-Nitrate methylenephenyl)-6-((S)-2-Aminopropionamido)-5-carbonyl-1,2,3,5,6,7 , Preparation of 10,10a-octahydropyrrolo[1,2-a]azacycloctane-3-carboxylate trifluoroacetate (G 3 ):
15℃下,将化合物E2(20mg,0.05mmol)溶于干燥的氯仿(5mL),加入DCC(206mg,1mmol)和DIEA(165μL,1mmol)的混合氯仿溶液,然后加入2-(4-羟基苯基)甲基硝酸酯(42mg,0.25mmol),混合液室温搅拌过夜。减压抽干溶剂,得到淡黄色油状物F3。将F3溶于氯仿(3mL),在15℃下,滴加TFA(0.5mL),0.3h后,蒸干溶剂,浓缩所得残留物经HPLC纯化,冷冻干燥,得到白色固体G3(2.3mg,8%)。反应化学方程式见式ⅩⅢ。化合物G3的1H NMR检测谱图如图3所示。At 15°C, compound E 2 (20 mg, 0.05 mmol) was dissolved in dry chloroform (5 mL), a mixed chloroform solution of DCC (206 mg, 1 mmol) and DIEA (165 μL, 1 mmol) was added, and then 2-(4-hydroxy Phenyl)methyl nitrate (42mg, 0.25mmol), the mixture was stirred at room temperature overnight. The solvent was dried under reduced pressure to obtain F 3 as a pale yellow oil. F 3 was dissolved in chloroform (3 mL), and TFA (0.5 mL) was added dropwise at 15°C. After 0.3 h, the solvent was evaporated to dryness, and the resulting residue was purified by HPLC and freeze-dried to obtain a white solid G 3 (2.3 mg ,8%). The reaction chemical equation is shown in Formula XIII. The 1 H NMR detection spectrum of compound G 3 is shown in FIG. 3 .
1H NMR(400MHz,CDCl3):δ7.46-7.29(m,2H),7.27-7.10(m,2H),5.95-5.66(m,2H),5.04-4.80(m,1H),4.67(dd,J=7.7,6.1Hz,1H),4.24-4.10(m,2H),4.07-3.99(m,1H),3.71-3.51(m,1H),2.77-2.47(m,2H),2.47-2.23(m,1H),2.20-1.45(m,7H),1.54(d,J=6.4Hz,3H).MS(ESI):m/z 447.2(M+H)+;HR ESI MS for C21H27N4O7required 446.1801,found:446.1859. 1 H NMR (400MHz, CDCl 3 ): δ7.46-7.29(m,2H),7.27-7.10(m,2H),5.95-5.66(m,2H),5.04-4.80(m,1H),4.67( dd,J=7.7,6.1Hz,1H),4.24-4.10(m,2H),4.07-3.99(m,1H),3.71-3.51(m,1H),2.77-2.47(m,2H),2.47- 2.23(m,1H),2.20-1.45(m,7H),1.54(d,J=6.4Hz,3H).MS(ESI):m/z 447.2(M+H) + ; HR ESI MS for C 21 H 27 N 4 O 7 required 446.1801, found: 446.1859.
化合物G4~G48可采用与制备G1或G2相同的方法制得,所不同是:Compounds G 4 ~ G 48 can be prepared by the same method as the preparation of G 1 or G 2 , the difference is:
采用BOP、或DCC、或PyBOP、或DIC、或TBTU、或HBTU、或HATU、或TATU替换实施例1中的EDCI;Adopt BOP, or DCC, or PyBOP, or DIC, or TBTU, or HBTU, or HATU, or TATU to replace EDCI in embodiment 1;
采用HOOBt、或HOSu替换实施例1中的HOBt;Adopt HOOBt, or HOSu to replace HOBt in embodiment 1;
采用2-(4-(氯代甲氧基)苯基)甲基硝酸酯或2-(4-羟基苯基)乙腈或2-(4-羟基苯基)甲基硝酸酯替换实施例1中的2-(4-(氯代甲氧基)苯基)乙腈;Adopt 2-(4-(chloromethoxy) phenyl) methyl nitrate or 2-(4-hydroxyl phenyl) acetonitrile or 2-(4-hydroxyl phenyl) methyl nitrate to replace in embodiment 1 2-(4-(chloromethoxy)phenyl)acetonitrile;
采用(S)-2-(叔丁氧羰基)氨基丁酸、或(S)-2-((叔丁氧羰基)甲基氨基)丙酸、或(S)-2-((叔丁氧羰基)甲基氨基)丁酸替换实施例1中的N-叔丁氧羰基-L-丙氨酸。Using (S)-2-(tert-butoxycarbonyl)aminobutyric acid, or (S)-2-((tert-butoxycarbonyl)methylamino)propionic acid, or (S)-2-((tert-butoxy Carbonyl)methylamino)butyric acid was substituted for N-tert-butoxycarbonyl-L-alanine in Example 1.
采用吡啶、或DBU、或N-甲基吗啉替换实施例1中的DIEA和三乙胺。Adopt pyridine, or DBU, or N-methylmorpholine to replace DIEA and triethylamine in Example 1.
为了更好的说明本发明的效果,下面结合给出本发明的实验证明例:In order to better illustrate the effect of the present invention, the experimental proof example of the present invention is given below in conjunction with:
1、实验证明例11. Experimental example 1
X-连锁凋亡抑制蛋白(XIAP)是IAP蛋白家族的重要成员,XIAP通过直接与caspase-3、caspase-7、caspase-9结合,来抑制caspase的活性,从而抑制细胞凋亡。本发明以G1、G2以及G3为例,在荧光偏振试验中,分别测定G1、G2以及G3拮抗X-连锁凋亡抑制蛋白(XIAP)的BIR3域活性的能力。X-linked inhibitor of apoptosis protein (XIAP) is an important member of the IAP protein family. XIAP inhibits the activity of caspases by directly binding to caspase-3, caspase-7, and caspase-9, thereby inhibiting cell apoptosis. In the present invention, taking G 1 , G 2 and G 3 as examples, the abilities of G 1 , G 2 and G 3 to antagonize the activity of the BIR3 domain of X-linked inhibitor of apoptosis protein (XIAP) are respectively determined in the fluorescence polarization test.
1.1实验材料及仪器1.1 Experimental materials and instruments
(1)荧光标记的多肽配体(1) Fluorescently labeled peptide ligands
由同事合成七肽分子H-AVPFAQK-(6-FAM)-NH2,在其赖氨酸支链的ε氨基上做荧光标记。该荧光肽的结构由ESI-MS确认,经HPLC分析,其纯度高于98%。荧光肽溶于超纯水中,其溶液浓度经紫外吸收法确定为467μM。溶液每10μL分装,用锡纸包裹避光,-20℃保存。A colleague synthesized the heptapeptide molecule H-AVPFAQK-(6-FAM)-NH 2 , and made a fluorescent label on the ε amino group of its lysine branched chain. The structure of the fluorescent peptide was confirmed by ESI-MS, and its purity was higher than 98% by HPLC analysis. The fluorescent peptide was dissolved in ultrapure water, and its solution concentration was determined to be 467 μM by ultraviolet absorption method. The solution was divided into 10 μL portions, wrapped in tin foil to avoid light, and stored at -20°C.
(2)XIAP-BIR3重组蛋白(2) XIAP-BIR3 recombinant protein
XIAP-BIR3重组蛋白购于R&D Systems Inc.。蛋白是大肠杆菌来源的,含Asn252-Thr356残基,带一个N端Met和6-His标签。每50μg分装,-20℃下保存在50μL的pH值为8.0,含50mM Tris–HCl、300mM KCl、50μM醋酸锌、1mM DTT的缓冲溶液中。XIAP-BIR3 recombinant protein was purchased from R&D Systems Inc. The protein is of E. coli origin and contains residues Asn252-Thr356 with an N-terminal Met and 6-His tag. Each 50μg aliquot is stored in 50μL buffer solution containing 50mM Tris-HCl, 300mM KCl, 50μM zinc acetate, and 1mM DTT at -20°C with a pH value of 8.0.
(3)反应缓冲液(3) Reaction buffer
本测试使用的反应缓冲液包含20mM Hepes、2mM dithiothreitol(DTT)、100mMNaCl、0.1%Bovine serum albumin(BSA),pH仪调节其pH值至7.4。所用试剂均购于Sigma-Aldrich公司,纯度为最高级别。The reaction buffer used in this test contains 20mM Hepes, 2mM dithiothreitol (DTT), 100mM NaCl, 0.1% Bovine serum albumin (BSA), and the pH value is adjusted to 7.4 by a pH meter. All reagents used were purchased from Sigma-Aldrich Company with the highest level of purity.
(4)样品溶液的配制(4) Preparation of sample solution
首先将化合物G1、G2以及G3分别溶于超纯水,配制为10mM的母液,然后将母液稀释至所需浓度。Firstly, compounds G 1 , G 2 and G 3 were respectively dissolved in ultrapure water to prepare a 10 mM mother solution, and then the mother solution was diluted to the desired concentration.
(5)实验仪器(5) Experimental equipment
Perkin Elmer EnVision多标记微孔板检测仪(EnVision Multilabel Reader),pH计,紫外吸收检测仪,384孔检测板。Perkin Elmer EnVision Multilabel Microplate Reader (EnVision Multilabel Reader), pH meter, UV absorbance detector, 384-well detection plate.
1.2实验方法1.2 Experimental method
(1)准备384孔检测板(1) Prepare 384-well detection plate
首先,将2.5nM的荧光肽和250nM的XIAP-BIR3蛋白加入至反应缓冲液中,形成测试缓冲溶液,并孵化半小时。与此同时,将样品母液稀释成一系列浓度,浓度范围为5mM至5nM。First, 2.5nM fluorescent peptide and 250nM XIAP-BIR3 protein were added to the reaction buffer to form a test buffer solution, and incubated for half an hour. At the same time, the sample stocks were diluted into a series of concentrations ranging from 5mM to 5nM.
然后,在384孔检测板上,每一个浓度点三个重复样。首先,用移液枪向384孔检测板的孔中加入16μL的测试缓冲溶液,再加入4μL样品溶液。混合之后,孔中溶液体积变为20μL,于是,荧光肽和XIAP-BIR3的浓度分别变为最佳测试浓度,即2nM和200nM。样品的最终浓度变为1mM至1nM。将384孔检测板室温孵化20~30分钟,用微孔板检测仪读数。然后将检测板再孵化20~30分钟,再次读数。Then, on a 384-well assay plate, three replicates of each concentration were spotted. First, add 16 μL of the test buffer solution to the wells of the 384-well assay plate with a pipette gun, and then add 4 μL of the sample solution. After mixing, the volume of the solution in the wells becomes 20 μL, so the concentrations of the fluorescent peptide and XIAP-BIR3 become the optimal test concentrations, namely 2 nM and 200 nM, respectively. The final concentration of the samples was varied from 1 mM to 1 nM. Incubate the 384-well assay plate at room temperature for 20-30 minutes, and read with a microplate reader. The assay plate was then incubated for another 20-30 minutes and read again.
(2)数据处理(2) Data processing
所有数据均运用GraphPad Prism的非线性回归曲线拟合程序分析。All data were analyzed using the nonlinear regression curve fitting program of GraphPad Prism.
1.3结果与讨论1.3 Results and discussion
荧光肽和XIAP-BIR3蛋白的最终测试浓度分别固定为2nM和200nM,所测试样品的最终浓度范围为1mM至1nM。化合物G1与XIAP-BIR3竞争性结合抑制曲线如图4所示,以mP值为Y轴,log C为X轴(C为测试样品的浓度)。结果表明,化合物G1具有较好的与XIAP-BIR3的结合亲和力。由于化合物G1对XIAP-BIR3竞争性结合抑制,其结合曲线为S型,即mP值随测试样品浓度的增加而减小,当样品浓度足够低时,mP值达到最大值,不再变化。反之,当样品浓度足够高时,mP值达到最小值,抑制饱和。所测数据经GraphPad Prism分析,得出化合物G1的IC50值为3.6μM。The final test concentrations of the fluorescent peptide and XIAP-BIR3 protein were fixed at 2nM and 200nM, respectively, and the final concentration of the tested samples ranged from 1mM to 1nM. The competitive binding inhibition curve between compound G1 and XIAP-BIR3 is shown in Figure 4, with mP as the Y axis and log C as the X axis (C is the concentration of the test sample). The results showed that compound G 1 had better binding affinity to XIAP-BIR3. Due to the competitive binding inhibition of compound G1 on XIAP-BIR3, its binding curve is S-shaped, that is, the mP value decreases with the increase of the test sample concentration, and when the sample concentration is low enough, the mP value reaches the maximum and does not change anymore. Conversely, when the sample concentration is high enough, the mP value reaches a minimum value, suppressing saturation. The measured data were analyzed by GraphPad Prism, and the IC 50 value of compound G 1 was 3.6 μM.
在同样的条件下,用同样的检测方法,测得G2的IC50值为6.7μM,G,3的IC50值为8.3μM。此外,阳性对照物——四肽分子AVPI(Ala-Val-Pro-Ile)的IC50值为0.8μM。虽然G1、G2以及G3的IC50值不如AVPI,但是化合物G1、G2以及G3的非肽特征更加明显,且有望作用于多个抗癌靶点。荧光偏振试验结果表明,化合物G1、G2以及G3是一种新型、较高效的XIAP非肽拮抗剂。Under the same conditions and using the same detection method, the measured IC 50 value of G 2 was 6.7 μM, and the IC 50 value of G ,3 was 8.3 μM. In addition, the IC 50 value of the positive control substance—tetrapeptide molecule AVPI (Ala-Val-Pro-Ile) was 0.8 μM. Although the IC 50 values of G 1 , G 2 and G 3 are not as good as those of AVPI, compounds G 1 , G 2 and G 3 have more obvious non-peptide characteristics and are expected to act on multiple anticancer targets. The results of fluorescence polarization test showed that compounds G 1 , G 2 and G 3 are new and more efficient non-peptide antagonists of XIAP.
2、实验证明例22. Experimental example 2
以G1为例,在MDA-MB-231乳腺癌细胞株中,测定G1与另一种抗癌药物TRAIL一起使用,对细胞凋亡的协同作用。Taking G1 as an example, in the MDA-MB-231 breast cancer cell line, the synergistic effect of G1 and another anticancer drug TRAIL on cell apoptosis was determined.
2.1实验材料及方法2.1 Experimental materials and methods
(1)细胞培养及试剂(1) Cell culture and reagents
所有化合物溶于DMSO中,配制为浓度为10mM的储备溶液。细胞在补充10%胎牛血清(FBS)、青霉素(100U/mL)、链霉素(100mg/mL)的DMEM培养基中培养。TRAIL购于PeproTechInc.。All compounds were dissolved in DMSO and prepared as stock solutions at a concentration of 10 mM. Cells were cultured in DMEM medium supplemented with 10% fetal bovine serum (FBS), penicillin (100 U/mL), streptomycin (100 mg/mL). TRAIL was purchased from PeproTech Inc.
(2)3-(4,5-二甲基噻唑-2)-2,5-二苯基四氮唑溴盐(MTT)试验(2) 3-(4,5-dimethylthiazole-2)-2,5-diphenyltetrazolium bromide (MTT) test
细胞存活率用MTT法测试。首先,将细胞置于96孔板(1×106细胞/孔),然后加入相应浓度的所测化合物和TRAIL,在培养皿中维持24、48、96小时。最后,加入20μL的MTT(5mg/mL的磷酸盐缓冲液)加入至细胞培养皿中,37℃下孵化2小时。所得晶体溶于200μL的DMSO中,用Vector3在490nm波长下测量吸收强度。Cell viability was tested by MTT assay. First, the cells were placed in a 96-well plate (1×10 6 cells/well), and then the compounds to be tested and TRAIL at corresponding concentrations were added, and maintained in the culture dish for 24, 48, and 96 hours. Finally, 20 μL of MTT (5 mg/mL phosphate buffer) was added to the cell culture dish and incubated at 37° C. for 2 hours. The resulting crystals were dissolved in 200 μL of DMSO, and the absorption intensity was measured at a wavelength of 490 nm with Vector3.
2.2结果与讨论2.2 Results and discussion
首先,在MDA-MB-231细胞株中,运用MTT试验,测试了10ng/mL、50ng/mL、100ng/mL三个浓度的TRAIL单独使用时对细胞凋亡的影响。结果如图5所示,随着时间的增长,以及随着TRAIL浓度的增大,细胞存活率降低。但是,总的来说,即使在100ng/mL的浓度条件下,TRAIL对MDA-MB-231癌细胞的细胞凋亡作用也不是太明显,细胞培养96小时后,仍有65%的癌细胞存活。First, in the MDA-MB-231 cell line, using the MTT assay, tested the effects of TRAIL at three concentrations of 10ng/mL, 50ng/mL, and 100ng/mL on cell apoptosis when used alone. The results are shown in Figure 5, with the increase of time and the increase of TRAIL concentration, the cell viability decreased. However, in general, even at a concentration of 100ng/mL, the effect of TRAIL on the apoptosis of MDA-MB-231 cancer cells is not too obvious. After 96 hours of cell culture, 65% of cancer cells still survived .
然后,运用MTT试验,测试了5μM G1分别与10ng/mL、50ng/mL、100ng/mL三个浓度的TRAIL共同作用,对细胞凋亡的影响。结果如图5所示,细胞培养48小时后,化合物G1与TRAIL显示出良好的剂量依存性的协同作用,而这种协同作用在较高浓度下显得更为明显。根据所得结果,可以推断出细胞凋亡越活跃,这种协同作用越明显。譬如,96小时孵化后,100ng/mL的TRAIL单独使用,65%细胞存活,然而,TRAIL与5μM G1一起使用时,仅31%的细胞存活,抗癌活性大大提高。Then, using the MTT assay, we tested the effects of 5μM G 1 and TRAIL at three concentrations of 10ng/mL, 50ng/mL and 100ng/mL on apoptosis. The results are shown in Figure 5, after 48 hours of cell culture, compound G1 and TRAIL showed a good dose-dependent synergistic effect, and this synergistic effect was more obvious at higher concentrations. From the results obtained, it can be deduced that the more active the apoptosis, the more pronounced this synergistic effect. For example, after 96 hours of incubation, 100ng/mL TRAIL was used alone, and 65% of the cells survived. However, when TRAIL was used together with 5μM G1 , only 31% of the cells survived, and the anticancer activity was greatly improved.
试验结果表明,该类杂化药物可以有效地拮抗IAPs的作用,在MDA-MB-231乳腺癌细胞株中,可以使原本对TRAIL产生药耐受的MDA-MB-231细胞变得对TRAIL敏感,从而加速细胞凋亡。该类杂化药物可以作为新型抗癌药物的先导化合物,用于新型抗癌药物的开发和研究中。The test results show that this type of hybrid drug can effectively antagonize the effect of IAPs, and in the MDA-MB-231 breast cancer cell line, it can make the MDA-MB-231 cells that are resistant to TRAIL become sensitive to TRAIL , thereby accelerating cell apoptosis. This type of hybrid drug can be used as a lead compound of a new anticancer drug in the development and research of a new anticancer drug.
缩略词表(按字母顺序)List of Acronyms (in alphabetical order)
上述实施例为本发明较佳的实施方式,但本发明的实施方式并不受上述实施例的限制,其他的任何未背离本发明的精神实质与原理下所作的改变、修饰、替代、组合、简化,均应为等效的置换方式,都包含在本发明的保护范围之内。The above-mentioned embodiment is a preferred embodiment of the present invention, but the embodiment of the present invention is not limited by the above-mentioned embodiment, and any other changes, modifications, substitutions, combinations, Simplifications should be equivalent replacement methods, and all are included in the protection scope of the present invention.
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CN101374829A (en) * | 2005-12-19 | 2009-02-25 | 健泰科生物技术公司 | Inhibitors of IAP |
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