CN106167771B - A kind of Bacillus megaterium D122 and its inoculum and preparation method of inoculum - Google Patents
A kind of Bacillus megaterium D122 and its inoculum and preparation method of inoculum Download PDFInfo
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Abstract
本发明涉及微生物菌剂技术领域,具体涉及一种巨大芽孢杆菌D122及其菌剂和菌剂制备方法,所述巨大芽孢杆菌D122保藏于中国典型培养物保藏中心,保藏号为CCTCCM 2015751。所述菌剂制备方法,包括以下步骤:(1)分离、筛选;(2)纯化、保存;(3)培养基培养;(4)D122菌剂制备,得到巨大芽孢杆菌D122菌剂。该巨大芽孢杆菌D122,其具有固氮酶活性和分泌生长素吲哚乙酸的功能。
The invention relates to the technical field of microbial inoculants, in particular to a Bacillus megaterium D122, an inoculum and a preparation method for the inoculum. The preparation method of the bacterial agent includes the following steps: (1) separation and screening; (2) purification and preservation; (3) culture medium; (4) preparation of the D122 bacterial agent to obtain the Bacillus megaterium D122 bacterial agent. The Bacillus megaterium D122 has nitrogenase activity and the function of secreting auxin indoleacetic acid.
Description
技术领域technical field
本发明涉及微生物菌剂技术领域,具体涉及一种巨大芽孢杆菌D122及其菌剂和菌剂制备方法。The invention relates to the technical field of microbial inoculants, in particular to a Bacillus megaterium D122, inoculum and a preparation method thereof.
背景技术Background technique
农业生产长期依赖化学肥料,不仅大量浪费不可再生资源,还导致土质变差、农产品品质下降和环境污染等问题,极大影响了人类的健康生存。Agricultural production has long relied on chemical fertilizers, which not only wastes a lot of non-renewable resources, but also leads to problems such as poor soil quality, degradation of agricultural product quality and environmental pollution, which greatly affects the healthy survival of human beings.
巨大芽孢杆菌(Bacillus megaterium)是一种解磷促钾固氮细菌,能够很好的降解土壤中不能被植物利用的磷、钾,提高土壤肥力,同时固定空气中的氮气,促进作物增产。但是,我国微生物肥料行业生产的产品表现出很多问题,例如有效活菌数低,杂菌率较高,有效期不长等,严重影响了农民使用的积极性和市场的开拓。国内对巨大芽孢杆菌在微生物肥料上的研究主要集中在菌株选育、解磷效果、发酵条件优化及与解钾菌相互作用等方面,而对巨大芽孢杆菌菌剂保护剂的研究却不多见。Bacillus megaterium ( Bacillus megaterium ) is a kind of bacteria that dissolves phosphorus and promotes potassium and nitrogen fixation. It can well degrade phosphorus and potassium in the soil that cannot be used by plants, improve soil fertility, and at the same time fix nitrogen in the air to promote crop yield. However, the products produced by my country's microbial fertilizer industry show many problems, such as low number of effective viable bacteria, high rate of miscellaneous bacteria, and short validity period, which seriously affect farmers' enthusiasm for use and market development. Domestic research on Bacillus megaterium on microbial fertilizers mainly focuses on strain selection, phosphorus solubilizing effect, optimization of fermentation conditions and interaction with potassium solubilizing bacteria, etc., while the research on Bacillus megaterium inoculant protective agent is rare. .
发明内容SUMMARY OF THE INVENTION
本发明的目的是针对现有技术中的上述不足,提供一种巨大芽孢杆菌D122,其具有固氮酶活性和分泌生长素吲哚乙酸的功能。The object of the present invention is to provide a kind of Bacillus megaterium D122, which has nitrogenase activity and the function of secreting auxin indoleacetic acid in view of the above-mentioned deficiencies in the prior art.
本发明的另一目的是针对现有技术中的上述不足,提供一种巨大芽孢杆菌D122菌剂,具有较高的固氮酶活性且能分泌生长素,农业应用范围广,经济效益高。Another object of the present invention is to provide a Bacillus megaterium D122 bacterial agent for the above-mentioned deficiencies in the prior art, which has high nitrogenase activity and can secrete auxin, has a wide range of agricultural applications and high economic benefits.
本发明的另一目的是针对现有技术中的上述不足,提供一种巨大芽孢杆菌D122菌剂制备方法,工艺简单成熟,可规模化生产。Another object of the present invention is to provide a method for preparing a Bacillus megaterium D122 inoculum in view of the above-mentioned deficiencies in the prior art, which is simple and mature in technology and can be produced on a large scale.
本发明的目的通过以下技术方案实现。The object of the present invention is achieved through the following technical solutions.
一种巨大芽孢杆菌D122,所述巨大芽孢杆菌D122 Bacillus megaterium D122保藏于中国典型培养物保藏中心(China Center for Type Collection),地址为中国武汉大学,分类命名为巨大芽孢杆菌D122 Bacillus megaterium D122,保藏日期为2015年12月15日,保藏编号为CCTCC NO: M2015751。A Bacillus megaterium D122, the Bacillus megaterium D122 is preserved in the China Center for Type Collection (China Center for Type Collection), the address is Wuhan University, China, and the classification name is Bacillus megaterium D122, preserved The date is December 15, 2015, and the deposit number is CCTCC NO: M2015751.
所述巨大芽孢杆菌D122具有序列表NO.1的DNA序列。The Bacillus megaterium D122 has the DNA sequence of Sequence Listing No. 1.
所述巨大芽孢杆菌D122的固氮酶活性为500-600 nmol/(mL·h),其在生长代谢过程中可以产生吲哚乙酸,吲哚乙酸的分泌量为100-200 mg/L。The nitrogenase activity of the Bacillus megaterium D122 is 500-600 nmol/(mL·h), it can produce indoleacetic acid in the process of growth and metabolism, and the secretion amount of indoleacetic acid is 100-200 mg/L.
固氮酶活性测定nitrogenase activity assay
1、试验方法1. Test method
采用乙炔还原法对各菌株的固氮酶活性进行测定。将保存的各菌株用VM-Ethanol固体培养基活化,用接种环挑取1环菌体于1.5mL的无菌离心管中,用无菌水稀释,按相同接种量接入装有5 mL半固体培养基的10 mL试管中,用反口橡胶塞密封。 37℃培养24 h后,注入1/10体积的10%乙炔气体,继续培养24 h,从试管中抽取0.5 mL气体注入气相色谱仪(北京天普分析仪器厂SP-2100)中,测定乙炔、乙烯的含量。按下列公式计算固氮酶活性大小(北京农业大学微生物专业编,1986):The nitrogenase activity of each strain was determined by acetylene reduction method. The preserved strains were activated with VM-Ethanol solid medium, and one loop of bacterial cells was picked with an inoculation loop into a 1.5 mL sterile centrifuge tube, diluted with sterile water, and inserted into a 5 mL half-filled tube according to the same inoculum amount. In a 10 mL test tube of solid medium, seal it with a reverse rubber stopper. After culturing at 37°C for 24 hours, inject 1/10 volume of 10% acetylene gas, continue to culture for 24 hours, extract 0.5 mL of gas from the test tube and inject it into a gas chromatograph (Beijing Tianpu Analytical Instrument Factory SP-2100) to measure acetylene, Ethylene content. Calculate nitrogenase activity according to the following formula (Beijing Agricultural University Microbiology Specialty, 1986):
C=(h x×c×V)/(24.9×h s×t) (2.1) C =( h x × c × V )/(24.9 × h s × t ) (2.1)
其中,h x为样品峰面积值;h s为标准C2H4峰面积值;c为标准C2H4浓度(nmol/mL);Wherein, h x is the sample peak area value; h s is the standard C 2 H 4 peak area value; c is the standard C 2 H 4 concentration (nmol/mL);
V为培养容器体积(mL);t为样品培养时间(h);C为产生的C2H4浓度[nmol/(mL·h)]。 V is the culture vessel volume (mL); t is the sample incubation time (h); C is the generated C 2 H 4 concentration [nmol/(mL·h)].
2、试验结果 2. Test results
结合公式(2.1)和固氮酶活性测定图4得知,固氮酶活性为500-600 nmol/(mL·h)。由此可以说明,巨大芽孢杆菌D122在代谢过程中可以产生特定的固氮酶,可以自生固定大气中的氮气。Combining formula (2.1) and nitrogenase activity determination in Figure 4, we know that nitrogenase activity is 500-600 nmol/(mL·h). It can be shown that Bacillus megaterium D122 can produce specific nitrogenase in the metabolic process, which can autogenously fix nitrogen in the atmosphere.
生长素定性含量测定Auxin qualitative assay
(1)挑取菌株分别接种(OD 600=1.0,0.5mL菌悬液)到盛有50mL King液体培养基的250mL三角瓶中,每组3个重复。(1) Pick the strains and inoculate them respectively ( OD 600 =1.0, 0.5mL bacterial suspension) into 250mL conical flasks containing 50mL King liquid medium, 3 replicates per group.
(2)接种完毕后,将三角瓶置于摇床上,28℃,125rpm,培养3d,待测。(2) After the inoculation is completed, place the triangular flask on a shaker, 28°C, 125rpm, and cultivate for 3 days, to be tested.
(3)将上述在King液体培养基上生长3d的菌悬液50µL置于透明离心管中,同时加50µL比色液。(3) Put 50 µL of the above bacterial suspension grown on King liquid medium for 3 days into a transparent centrifuge tube, and add 50 µL of colorimetric solution at the same time.
(4)设阳性对照和阴性对照,阳性对照中加入50µL浓度为10mg/L的植物生长激素(IAA),同时加50µL比色液。阴性对照中加50µLKing液体培养基,同时加50µL比色液。(4) Set a positive control and a negative control, add 50 µL of plant growth hormone (IAA) at a concentration of 10 mg/L to the positive control, and add 50 µL of colorimetric solution at the same time. Add 50µL of King liquid medium and 50µL of colorimetric solution to the negative control.
(5)将阳性对照液、阴形对照液和测定液置于白陶瓷板并置于室温下15min,观察其颜色变化,颜色变红者为阳性,表示能够分泌IAA,且颜色越深表示分泌IAA的能力越强;若不变色则为阴性,表示该菌株不能分泌IAA,由此作为判断依据进行判断分析。(5) Place the positive control solution, negative control solution and assay solution on a white ceramic plate and place it at room temperature for 15 minutes, observe the color change, if the color turns red, it is positive, indicating that IAA can be secreted, and the darker the color, the more secreted The stronger the ability of IAA; if it does not change color, it is negative, indicating that the strain cannot secrete IAA, which is used as a judgment basis for judgment analysis.
培养基及试剂配方为:King培养基(1L):蛋白胨20g,K2HPO4 1.725g,MgSO4·7H2O1.5g,丙三醇 15mL,色氨酸0.1g,蒸馏水1000mL。The medium and reagent formulations are: King medium (1 L): peptone 20 g, K 2 HPO 4 1.725 g, MgSO 4 ·7H 2 O 1.5 g, glycerol 15 mL, tryptophan 0.1 g, and distilled water 1000 mL.
生长素定量测定Quantitative determination of growth hormone
参照 Riberio 等的方法略加改动。菌株D122接种到含有1 g/L色氨酸的LB液体培养基中,30℃,180 r/min,振荡培养 48 h。将培养液10000 r/min离心 5 min,取100 mL上清液加到 96孔板中,与 100mL Salkowski’s 试剂(1 mL 0.5 mol/L FeCl3和 49 mL 35%高氯酸)混匀,室温静置 30 min,在波长 530 nm下用酶标仪测定吸光度。用不同浓度的IAA标准品制作标准曲线,测定结果见表1。Referring to the method of Riberio et al. with slight modifications. Strain D122 was inoculated into LB liquid medium containing 1 g/L tryptophan at 30 °C, 180 r/min, and shaken for 48 h. Centrifuge the culture medium at 10,000 r/min for 5 min, add 100 mL of supernatant to a 96-well plate, and mix with 100 mL of Salkowski's reagent (1 mL of 0.5 mol/L FeCl 3 and 49 mL of 35% perchloric acid) at room temperature. After standing for 30 min, the absorbance was measured with a microplate reader at a wavelength of 530 nm. A standard curve was prepared with different concentrations of IAA standard substances, and the determination results are shown in Table 1.
表1 菌株D122 IAA测定结果
从表1和图5可以看出,巨大芽孢杆菌D122的生长素浓度为158.36 mg/L,因此,可以判断巨大草芽孢杆菌D122在生长代谢过程中可以产生IAA,具有促进作物生长的功能。It can be seen from Table 1 and Figure 5 that the auxin concentration of Bacillus megaterium D122 is 158.36 mg/L. Therefore, it can be judged that Bacillus megaterium D122 can produce IAA in the process of growth and metabolism, and has the function of promoting crop growth.
一种巨大芽孢杆菌D122的菌剂制备方法,包括以下步骤:A method for preparing a bacterial agent of Bacillus megaterium D122, comprising the following steps:
(1)分离、筛选(1) Separation and screening
选取含有巨大芽孢杆菌D122的固氮菌菌落的土样,经分离筛选培养基培养得到固氮菌菌落;The soil sample containing the nitrogen-fixing bacteria colony of Bacillus megaterium D122 was selected, and the nitrogen-fixing bacteria colony was obtained by separating and screening the culture medium;
(2)纯化、保存(2) Purification and preservation
在纯化保存培养基上将分离、筛选获得的固氮菌菌落进行划线纯化,培养分离得到巨大芽孢杆菌D122单菌落,保存该单菌落备用;巨大芽孢杆菌D122单菌落如图1所示。The nitrogen-fixing bacteria colonies obtained by separation and screening were streaked and purified on the purification and preservation medium, and a single colony of Bacillus megaterium D122 was obtained by culturing and separating, and the single colony was stored for use; the single colony of Bacillus megaterium D122 was shown in Figure 1.
具体地,在纯化保存培养基上将分离、筛选获得的菌落进行划线纯化,30℃恒温培养36-48小时分离得到巨大芽孢杆菌D122单菌落,将平板上出现的单菌落保存在试管中,30℃恒温培养36-48小时,置于2-5℃冰箱中保存,优选地置于4℃冰箱中保存。Specifically, streak and purify the colonies obtained by separation and screening on the purification and preservation medium, culture at a constant temperature of 30° C. for 36-48 hours to isolate a single colony of Bacillus megaterium D122, and store the single colony that appears on the plate in a test tube, Incubate at a constant temperature of 30°C for 36-48 hours, and store in a refrigerator at 2-5°C, preferably in a refrigerator at 4°C.
(3)培养基培养(3) Culture medium
将活化好的巨大芽孢杆菌D122斜面接种于灭菌的液体培养基中,振荡培养,得到微生物液体发酵液;The activated Bacillus megaterium D122 slant is inoculated in a sterilized liquid medium, and shake cultured to obtain a microbial liquid fermentation broth;
(4)D122菌剂制备(4) Preparation of D122 inoculum
以氯化钠、乙酸钠和水的的混合液作为液体保护剂,加入到已培养好的液体发酵液中混匀,放置24h测定初始菌数为2.0-4.0亿/mL,得到巨大芽孢杆菌D122液体菌剂。The mixed solution of sodium chloride, sodium acetate and water is used as a liquid protective agent, added to the cultured liquid fermentation broth and mixed, and placed for 24h to determine the initial bacterial count of 200-400 million/mL to obtain Bacillus megaterium D122 Liquid bacteria.
液体保护剂的筛选实验Screening experiment of liquid protective agent
在实验基础上,选择蔗糖、氯化钠、糖蜜、乙酸钠作为液体保护剂的筛选对象。按一定比例加入到已培养好的液体发酵液中混匀,调水分,放置24h测定初始菌数。阴凉处放置30d,再次测定活菌数,以未添加保护剂的处理为对照(CK)。设7个处理,每处理3次重复,见表2。On the basis of experiments, sucrose, sodium chloride, molasses and sodium acetate were selected as the screening objects of liquid protective agents. Add it to the cultured liquid fermentation broth in a certain proportion, mix well, adjust the water, and place it for 24h to measure the initial bacterial count. It was placed in a cool place for 30 days, and the number of viable bacteria was determined again, and the treatment without protective agent was used as the control (CK). Seven treatments were set, and each treatment was repeated three times, see Table 2.
表2 保护剂的筛选(单位:占发酵液体积比/%)
添加保护剂对微生物菌剂有效活菌数及保存期的影响:将选定的保护剂按一定比例加入到已制备的菌剂D122中,密封室温保存。放置24h测定初始菌数,每隔1- 2个月测活菌数,同时以未加保护剂的处理为对照(CK)。The effect of adding protective agent on the effective viable count and shelf life of microbial inoculum: add the selected protective agent to the prepared inoculum D122 in a certain proportion, and store it in a sealed room at room temperature. Place for 24h to measure the initial bacterial count, measure the viable bacterial count every 1-2 months, and take the treatment without protective agent as the control (CK).
菌剂保护剂筛选结果:根据添加不同的保护剂对微生物菌剂有效活菌数及保存期的影响结果,确定最佳菌剂保护剂配方为7%氯化钠+1.5%乙酸钠。Screening results of inoculum protective agent: According to the effect of adding different protective agents on the effective viable count and shelf life of microbial inoculum, the optimal formula of inoculant protective agent was determined to be 7% sodium chloride + 1.5% sodium acetate.
所述步骤(4)中氯化钠的质量浓度为6-8%,乙酸钠的质量浓度为1-2%。In the step (4), the mass concentration of sodium chloride is 6-8%, and the mass concentration of sodium acetate is 1-2%.
所述步骤(1)分离、筛选的具体方法为:选取土样,加入含吐温80的无菌水,震荡,静置,取上清液离心,弃上清液,保留沉淀物,加入含吐温80的无菌水悬浮,离心,去沉淀,将上清液离心,弃上清液,保留沉淀物,将沉淀物用磷酸缓冲液悬浮,得到样品液;取上述样品液与磷酸缓冲液悬浮混合,得到稀释菌悬液;将稀释的菌悬液水浴加热,自然冷却后吸取涂布于无氮培养基,培养获得固氮菌菌落。The specific method for separation and screening in the step (1) is as follows: selecting soil samples, adding sterile water containing Tween 80, shaking, standing, taking the supernatant and centrifuging, discarding the supernatant, retaining the sediment, adding The sterile water of Tween 80 is suspended, centrifuged, and the precipitation is removed, the supernatant is centrifuged, the supernatant is discarded, the precipitate is retained, and the precipitate is suspended with a phosphate buffer to obtain a sample solution; take the above-mentioned sample solution and phosphate buffer Suspended and mixed to obtain a diluted bacterial suspension; the diluted bacterial suspension was heated in a water bath, and after natural cooling, it was sucked and coated on a nitrogen-free medium, and cultured to obtain nitrogen-fixing bacteria colonies.
更具体地,分离、筛选的方法为:More specifically, the methods of separation and screening are:
从广东省东莞市常平镇黄泥塘农场采取500 g 土样,加入3 L含0.01%吐温80的无菌水,震荡10min,静置半个小时,取上清液于20℃下4820rpm离心20min。弃上清液,保留沉淀物,加入30-50 mL含0.01%吐温80的无菌水悬浮,液体于20℃下5000 rpm离心5s,去沉淀,将上清液倒入一个干无菌离心管中于20℃下6000 rpm离心10min,弃上清液,保留沉淀物,将沉淀物用10 mL的pH 7.0磷酸缓冲液悬浮,得到样品液;取1 mL上述样品液与9 mL磷酸缓冲液悬浮混合,即为10倍稀释菌悬液。将稀释的菌悬液置于75℃水浴加热15 min,自然冷却后吸取100μL涂布于无氮培养基,30℃培养36-48小时获得含巨大芽孢杆菌D122菌的固氮菌菌落。Take a 500 g soil sample from Huangnitang Farm, Changping Town, Dongguan City, Guangdong Province, add 3 L of sterile water containing 0.01% Tween 80, shake it for 10 min, let it stand for half an hour, take the supernatant and centrifuge it at 4820 rpm for 20 min at 20°C . Discard the supernatant, keep the precipitate, add 30-50 mL of sterile water containing 0.01% Tween 80 to suspend, and centrifuge the liquid at 5000 rpm for 5s at 20°C to remove the precipitate, and pour the supernatant into a dry sterile centrifuge. Centrifuge the tube at 6000 rpm for 10 min at 20 °C, discard the supernatant, keep the precipitate, and suspend the precipitate with 10 mL of pH 7.0 phosphate buffer to obtain a sample solution; take 1 mL of the above sample solution and 9 mL of phosphate buffer Suspended and mixed, that is, 10-fold diluted bacterial suspension. The diluted bacterial suspension was placed in a 75°C water bath and heated for 15 min. After natural cooling, 100 μL was drawn and spread on a nitrogen-free medium, and cultured at 30°C for 36-48 hours to obtain nitrogen-fixing bacteria colonies containing Bacillus megaterium D122.
所述步骤(1)中,分离筛选培养基由以下质量的原料制成:CaCO3 1.0-1.4g,MgSO4·7H2O 0.6-1.2g,K2HPO4 1.0-2.0g,NaCl 0.1-0.4g,FeSO4·7H2O 0.001-0.005g,NaMO4·2H2O 0. 05-0.1g,蔗糖5- 10g,琼脂18-20g,蒸馏水1000ml,该分离筛选培养基的pH为7.1-7.4。本发明的分离筛选培养基属于改良无氮培养基。In the step (1), the separation and screening medium is made from the following raw materials: CaCO 3 1.0-1.4 g, MgSO 4 ·7H 2 O 0.6-1.2 g, K 2 HPO 4 1.0-2.0 g, NaCl 0.1- 0.4g, FeSO4 · 7H2O 0.001-0.005g, NaMO4 ·2H2O 0.05-0.1g, sucrose 5-10g, agar 18-20g, distilled water 1000ml, the pH of the separation and screening medium is 7.1- 7.4. The separation and screening medium of the present invention belongs to an improved nitrogen-free medium.
所述纯化保存的具体方法为:在纯化保存培养基上将分离、筛选获得的菌落进行划线纯化,30℃恒温培养36-48小时分离得到枯草芽孢杆菌D122单菌落。将平板上出现的单菌落保存在试管中,30℃恒温培养36-48小时,置于4℃冰箱中保存。巨大芽孢杆菌D122保藏于中国典型培养物保藏中心,保藏号码为:CCTCCM 2015751。The specific method for purification and preservation is as follows: streaking and purifying the colonies obtained by separation and screening on a purification and preservation medium, and culturing at a constant temperature of 30° C. for 36-48 hours to isolate a single colony of Bacillus subtilis D122. The single colonies that appeared on the plate were stored in test tubes, incubated at a constant temperature of 30°C for 36-48 hours, and stored in a refrigerator at 4°C. Bacillus megaterium D122 was deposited in the China Center for Type Culture Collection with the deposit number: CCTCCM 2015751.
(2)纯化保存培养基的配方为:牛肉膏3.0 g,蛋白胨10.0 g,氯化钠5.0 g,琼脂18.0 g,蒸馏水1000ml,纯化保存培养基的pH为7.0-7.4。(2) The formula of the purified preservation medium is: beef extract 3.0 g, peptone 10.0 g, sodium chloride 5.0 g, agar 18.0 g, distilled water 1000 ml, and the pH of the purified preservation medium is 7.0-7.4.
所述步骤(3)培养基培养中,培养基由以下质量的原料制成:CaCO3 1.0-1.4g,MgSO4·7H2O 0.6-1.2g,K2HPO4 1.0-2.0g,NaCl 0.1-0.4g,FeSO4·7H2O 0.001-0.005g,NaMO4·2H2O 0. 05-0.1g,蔗糖5- 10g,琼脂18-20g,蒸馏水1000ml,培养基的pH为7.1-7.4。In the step (3) medium cultivation, the medium is made of the following raw materials: CaCO 3 1.0-1.4 g, MgSO 4 ·7H 2 O 0.6-1.2 g, K 2 HPO 4 1.0-2.0 g, NaCl 0.1 -0.4g, FeSO 4 ·7H 2 O 0.001-0.005g, NaMO 4 ·2H 2 O 0.05-0.1g, sucrose 5-10g, agar 18-20g, distilled water 1000ml, the pH of the medium is 7.1-7.4.
所述步骤(2)和步骤(3)之间还包括有以下步骤:The following steps are also included between the steps (2) and (3):
(S1)革兰氏染色:将纯化后的单菌落进行革兰氏染色,筛选得到阳性菌;(S1) Gram staining: Gram-stain the purified single colony, and screen to obtain positive bacteria;
(S2)芽孢染色:将阳性菌进行芽孢染色,筛选得到含有芽孢的革兰氏阳性菌单菌落。(S2) Spore staining: the positive bacteria are stained with spores, and single colonies of Gram-positive bacteria containing spores are obtained by screening.
芽孢染色及其革兰氏染色Spore staining and its Gram stain
革兰氏染色和芽孢染色是两种细菌鉴定的常规方法,染色可以缩小鉴定范围。未经染色的细菌与周围环境折光率差别甚小,在显微镜下极难观察。革兰氏染色后细菌与环境形成鲜明对比,可以清楚地观察到细菌的形态、排列及某些菌种属于革兰氏阳性(G+)或者革兰氏阴性菌(G-),用以分类鉴定。革兰氏阴性菌普遍存在安全隐患,在农业微生物应用过程中直接高温灭菌后舍弃结构特征。芽孢染色将菌体内的芽孢进行染色,可以直观观察芽孢的大小、位置、形状等特点,进一步缩小其鉴定范围。芽孢杆菌具有保质期长,易于存放的特点,在农业微生物产品具有广泛的应用基础。Gram staining and spore staining are two routine methods for bacterial identification, and staining can narrow the identification. Unstained bacteria have very little difference in refractive index with the surrounding environment and are extremely difficult to observe under a microscope. After Gram staining, the bacteria are in sharp contrast with the environment, and the morphology, arrangement and some species of bacteria can be clearly observed as Gram-positive (G + ) or Gram-negative bacteria (G - ) for classification identification. Gram-negative bacteria generally have safety hazards, and structural characteristics are discarded after direct high-temperature sterilization in the application process of agricultural microorganisms. Spore staining dyes the spores in the bacteria, which can visually observe the size, position, shape and other characteristics of the spores, and further narrow the identification range. Bacillus has the characteristics of long shelf life and easy storage, and has a wide range of applications in agricultural microbial products.
1、革兰氏染色 1. Gram stain
(1) 涂片:在无菌操作台中,取一块载玻片,在火焰灯上方略烤,去除玻片上的杂质。在载玻片中央滴一滴无菌水,挑取单个菌落于水滴中,用灼烧过的接种环涂抹均匀。将样品载玻片在火灯上方来回过3次,以固定细胞。(1) Smear: In a sterile operating table, take a glass slide and bake it slightly above a flame lamp to remove impurities on the glass slide. Drop a drop of sterile water in the center of the slide, pick a single colony into the water drop, and spread it evenly with a cauterized inoculation loop. Pass the sample slide 3 times back and forth over the fire light to fix the cells.
(2)初染:滴加2-5滴草酸铵结晶紫染液,染1min,倾去染液,流水冲洗至无紫色。(2) Initial dyeing: Add 2-5 drops of ammonium oxalate crystal violet dye solution dropwise, dye for 1 min, pour off the dye solution, rinse with running water until no purple color is present.
(3)媒染:先用新配的碘液(碘 1.0g、碘化钾 2.0g、蒸馏水 300.0mL)冲去残水,再用碘液覆盖涂面1min,后水洗。(3) Mordant dyeing: Rinse off the residual water with newly prepared iodine solution (1.0g iodine, 2.0g potassium iodide, 300.0mL distilled water), then cover the coated surface with iodine solution for 1min, and then wash with water.
(4)脱色:除去残水后,滴加95%酒精进行脱色约15-20秒后,立即用流水冲洗。(4) Decolorization: After removing the residual water, add 95% alcohol dropwise to decolorize for about 15-20 seconds, then rinse with running water immediately.
(5)复染:滴加1滴番红染色液,染3-5min,水洗后用吸水纸吸干。(5) Counterstaining: add 1 drop of safranin dyeing solution dropwise, dye for 3-5min, wash with water and blot dry with absorbent paper.
(6)镜检:将载玻片置于光学显微镜下观察染色结果。(6) Microscopic examination: place the slides under an optical microscope to observe the staining results.
2、芽孢染色2. Spore staining
在无菌操作台中,取一块载玻片,在火焰灯上方略烤,去除玻片上的杂质。在载玻片中央滴一滴无菌水,挑取单个菌落水滴中,用灼烧过的接种环涂抹均匀。将样品载玻片在火灯上方来回过3次,以固定细胞。在涂布菌体的区域滴加1-2滴石碳酸碱性复红染液,染色3min。用蒸馏水冲洗掉染液,风干后,将载玻片置于光学显微镜下观察。In a sterile bench, take a slide and bake briefly over a flame lamp to remove impurities from the slide. Drop a drop of sterile water in the center of the slide, pick a single colony droplet, and spread it evenly with a cauterized inoculation loop. Pass the sample slide 3 times back and forth over the fire light to fix the cells. Add 1-2 drops of phenolic alkaline fuchsin staining solution dropwise to the area where the cells are coated, and stain for 3 min. The stain solution was rinsed with distilled water, and after air-drying, the slides were observed under a light microscope.
如图2和图3所示,通过革兰氏染色和芽孢染色结果可以看出,巨大芽孢杆菌D122为革兰氏阳性菌,杆状,含有芽孢。As shown in Figures 2 and 3, it can be seen from the results of Gram staining and spore staining that Bacillus megaterium D122 is a Gram-positive bacterium, rod-shaped, and contains spores.
一种巨大芽孢杆菌D122的菌剂,由所述的一种巨大芽孢杆菌D122的菌剂制备方法制备而成。A microbial inoculum of Bacillus megaterium D122 is prepared by the method for preparing a microbial inoculum of Bacillus megaterium D122.
本发明的有益效果:Beneficial effects of the present invention:
(1)本发明以巨大芽孢杆菌D122为出发菌株,对其固氮酶活性以及分泌生长素能力进行测定,发现菌株D122具有高效的固氮酶活性和分泌IAA能力。所述巨大芽孢杆菌D122的固氮酶活性为500-600 nmol/(mL·h),其在生长代谢过程中可以产生吲哚乙酸,吲哚乙酸的分泌量为100-200mg/L。(1) In the present invention, Bacillus megaterium D122 is used as the starting strain, and its nitrogenase activity and auxin secretion ability are measured, and it is found that strain D122 has efficient nitrogenase activity and IAA secretion ability. The nitrogenase activity of the Bacillus megaterium D122 is 500-600 nmol/(mL·h), it can produce indoleacetic acid in the process of growth and metabolism, and the secretion amount of indoleacetic acid is 100-200 mg/L.
(2)为了提高巨大芽孢杆菌D122菌剂的芽孢存活率,本发明加入了特定保护剂,降低芽孢在加工及储藏过程中的死亡率,有效地降低产品的成本,提高经济效益,为以后微生物肥料的生产提供指导。(2) In order to improve the spore survival rate of Bacillus megaterium D122 bacterial agent, the present invention adds a specific protective agent to reduce the mortality rate of spores in the process of processing and storage, effectively reduce the cost of the product, and improve the economic benefit, which is beneficial for future microorganisms. Provide guidance on the production of fertilizers.
(3)本发明所涉及巨大芽孢杆菌D122菌剂制备方法中添加一定比例的保护剂,能使菌种存活率维持在较高的水平,能够有效延长微生物肥料产品的贮存稳定性及产品的货架寿命。(3) A certain proportion of protective agent is added to the preparation method of Bacillus megaterium D122 bacterial agent involved in the present invention, so that the survival rate of the bacteria can be maintained at a high level, and the storage stability of the microbial fertilizer product and the shelf life of the product can be effectively prolonged. life.
附图说明Description of drawings
利用附图对发明作进一步说明,但附图中的实施例不构成对本发明的任何限制,对于本领域的普通技术人员,在不付出创造性劳动的前提下,还可以根据以下附图获得其它的附图。The invention will be further described by using the accompanying drawings, but the embodiments in the accompanying drawings do not constitute any limitation to the present invention. For those of ordinary skill in the art, under the premise of no creative work, other Attached.
图1为分离得到的巨大芽孢杆菌D122单菌落在显微镜下放大10×100倍的菌落图。Figure 1 is a colony diagram of the isolated Bacillus megaterium D122 single colony magnified 10×100 times under a microscope.
图2为巨大芽孢杆菌D122革兰氏染色结果图。Figure 2 is a graph showing the results of Gram staining of Bacillus megaterium D122.
图3为巨大芽孢杆菌D122芽孢染色结果图。Figure 3 is a graph showing the staining results of Bacillus megaterium D122 spores.
图4为巨大芽孢杆菌D122固氮酶活性测定结果图。Figure 4 is a graph showing the results of determination of nitrogenase activity of Bacillus megaterium D122.
图5为巨大芽孢杆菌D122 IAA比色效果图。Figure 5 is a colorimetric effect diagram of Bacillus megaterium D122 IAA.
具体实施方式Detailed ways
结合以下实施例对本发明作进一步描述。The present invention will be further described with reference to the following examples.
实施例1Example 1
本实施例的一种巨大芽孢杆菌D122,所述巨大芽孢杆菌D122保藏于中国典型培养物保藏中心,保藏号为CCTCCM 2015751。所述巨大芽孢杆菌D122具有序列表NO.1的DNA序列。One kind of Bacillus megaterium D122 in this example, the Bacillus megaterium D122 is deposited in the China Center for Type Culture Collection, and the deposit number is CCTCCM 2015751. The Bacillus megaterium D122 has the DNA sequence of Sequence Listing No. 1.
所述巨大芽孢杆菌D122的固氮酶活性为500 nmol/(mL·h),其在生长代谢过程中可以产生吲哚乙酸,吲哚乙酸的分泌量为100mg/L。The nitrogenase activity of the Bacillus megaterium D122 is 500 nmol/(mL·h), it can produce indoleacetic acid in the process of growth and metabolism, and the secretion amount of indoleacetic acid is 100 mg/L.
一种巨大芽孢杆菌D122的菌剂制备方法,包括以下步骤:A method for preparing a bacterial agent of Bacillus megaterium D122, comprising the following steps:
(1)分离、筛选(1) Separation and screening
选取含有巨大芽孢杆菌D122的固氮菌菌落的土样,经分离筛选培养基培养得到固氮菌菌落;The soil sample containing the nitrogen-fixing bacteria colony of Bacillus megaterium D122 was selected, and the nitrogen-fixing bacteria colony was obtained by separating and screening the culture medium;
(2)纯化、保存(2) Purification and preservation
在纯化保存培养基上将分离、筛选获得的固氮菌菌落进行纯化,培养分离得到巨大芽孢杆菌D122单菌落,保存该单菌落备用;The nitrogen-fixing bacteria colonies obtained by separation and screening are purified on the purification preservation medium, and the single colonies of Bacillus megaterium D122 are obtained by culturing and separating, and the single colonies are stored for future use;
(3)培养基培养(3) Culture medium
将活化好的巨大芽孢杆菌D122斜面接种于灭菌的液体培养基中,振荡培养,得到微生物液体发酵液;The activated Bacillus megaterium D122 slant is inoculated in a sterilized liquid medium, and shake cultured to obtain a microbial liquid fermentation broth;
(4)D122菌剂制备(4) Preparation of D122 inoculum
以氯化钠、乙酸钠和水的混合液作为液体保护剂,按一定比例加入到已培养好的液体发酵液中混匀,放置,测定初始菌数为2.0亿/mL,得到巨大芽孢杆菌D122菌剂。The mixed solution of sodium chloride, sodium acetate and water is used as a liquid protective agent, and is added to the cultured liquid fermentation broth according to a certain proportion, mixed, placed, and the initial bacterial count is determined to be 200 million/mL to obtain Bacillus megaterium D122 Bacterial agent.
所述步骤(4)中氯化钠的质量浓度为6%,乙酸钠的质量浓度为1%。In the step (4), the mass concentration of sodium chloride is 6%, and the mass concentration of sodium acetate is 1%.
所述步骤(1)分离、筛选的具体方法为:选取土样,加入含吐温80的无菌水,震荡,静置,取上清液离心,弃上清液,保留沉淀物,加入含吐温80的无菌水悬浮,离心,去沉淀,将上清液离心,弃上清液,保留沉淀物,将沉淀物用磷酸缓冲液悬浮,得到样品液;取上述样品液与磷酸缓冲液悬浮混合,得到稀释菌悬液;将稀释的菌悬液水浴加热,自然冷却后吸取涂布于无氮培养基,培养获得固氮菌菌落。The specific method for separation and screening in the step (1) is as follows: selecting soil samples, adding sterile water containing Tween 80, shaking, standing, taking the supernatant and centrifuging, discarding the supernatant, retaining the sediment, adding The sterile water of Tween 80 is suspended, centrifuged, and the precipitation is removed, the supernatant is centrifuged, the supernatant is discarded, the precipitate is retained, and the precipitate is suspended with a phosphate buffer to obtain a sample solution; take the above-mentioned sample solution and phosphate buffer Suspended and mixed to obtain a diluted bacterial suspension; the diluted bacterial suspension was heated in a water bath, and after natural cooling, it was sucked and coated on a nitrogen-free medium, and cultured to obtain nitrogen-fixing bacteria colonies.
所述步骤(1)中,分离筛选培养基由以下质量的原料制成:CaCO3 1.0g,MgSO4·7H2O 0.6g,K2HPO4 1.0g,NaCl 0.1g,FeSO4·7H2O 0.001g,NaMO4·2H2O 0. 05g,蔗糖5g,琼脂18g,蒸馏水1000ml,分离筛选培养基的pH为 7.1。In the step (1), the separation and screening medium is made from the following raw materials: CaCO 3 1.0g, MgSO 4 ·7H 2 O 0.6g, K 2 HPO 4 1.0g, NaCl 0.1g, FeSO 4 ·7H 2 O 0.001g, NaMO 4 ·2H 2 O 0.05g, sucrose 5g, agar 18g, distilled water 1000ml, the pH of the separation and screening medium was 7.1.
一种巨大芽孢杆菌D122的菌剂,由所述的一种巨大芽孢杆菌D122的菌剂制备方法制备而成。A microbial inoculum of Bacillus megaterium D122 is prepared by the method for preparing a microbial inoculum of Bacillus megaterium D122.
实施例2Example 2
本实施例与实施例1的不同之处在于,本实施例的所述步骤(2)和步骤(3)之间还包括有以下步骤:The difference between this embodiment and Embodiment 1 is that the following steps are further included between the steps (2) and (3) of this embodiment:
(S1)革兰氏染色:将纯化后的单菌落进行革兰氏染色,筛选得到阳性菌;(S1) Gram staining: Gram-stain the purified single colony, and screen to obtain positive bacteria;
(S2)芽孢染色:将阳性菌进行芽孢染色,筛选得到含有芽孢的革兰氏阳性菌单菌落。(S2) Spore staining: the positive bacteria are stained with spores, and single colonies of Gram-positive bacteria containing spores are obtained by screening.
具体地,革兰氏染色方法为:Specifically, the Gram staining method is:
(1) 涂片:在无菌操作台中,取一块载玻片,在火焰灯上方略烤,去除玻片上的杂质。在载玻片中央滴一滴无菌水,挑取单个菌落于水滴中,用灼烧过的接种环涂抹均匀。将样品载玻片在火灯上方来回过3次,以固定细胞。(1) Smear: In a sterile operating table, take a glass slide and bake it slightly above a flame lamp to remove impurities on the glass slide. Drop a drop of sterile water in the center of the slide, pick a single colony into the water drop, and spread it evenly with a cauterized inoculation loop. Pass the sample slide 3 times back and forth over the fire light to fix the cells.
(2)初染:滴加2-5滴草酸铵结晶紫染液,染1min,倾去染液,流水冲洗至无紫色。(2) Initial dyeing: Add 2-5 drops of ammonium oxalate crystal violet dye solution dropwise, dye for 1 min, pour off the dye solution, rinse with running water until no purple color is present.
(3)媒染:先用新配的碘液(碘 1.0g、碘化钾 2.0g、蒸馏水 300.0mL)冲去残水,再用碘液覆盖涂面1min,后水洗。(3) Mordant dyeing: Rinse off the residual water with newly prepared iodine solution (1.0g iodine, 2.0g potassium iodide, 300.0mL distilled water), then cover the coated surface with iodine solution for 1min, and then wash with water.
(4)脱色:除去残水后,滴加95%酒精进行脱色约15-20秒后,立即用流水冲洗。(4) Decolorization: After removing the residual water, add 95% alcohol dropwise to decolorize for about 15-20 seconds, then rinse with running water immediately.
(5)复染:滴加1滴番红染色液,染3-5min,水洗后用吸水纸吸干。(5) Counterstaining: add 1 drop of safranin dyeing solution dropwise, dye for 3-5min, wash with water and blot dry with absorbent paper.
(6)镜检:将载玻片置于光学显微镜下观察染色结果。(6) Microscopic examination: place the slides under an optical microscope to observe the staining results.
具体地,芽孢染色方法为:Specifically, the spore staining method is:
在无菌操作台中,取一块载玻片,在火焰灯上方略烤,去除玻片上的杂质。在载玻片中央滴一滴无菌水,挑取单个菌落水滴中,用灼烧过的接种环涂抹均匀。将样品载玻片在火灯上方来回过3次,以固定细胞。在涂布菌体的区域滴加1-2滴石碳酸碱性复红染液,染色3min。In a sterile bench, take a slide and bake briefly over a flame lamp to remove impurities from the slide. Drop a drop of sterile water in the center of the slide, pick a single colony droplet, and spread it evenly with a cauterized inoculation loop. Pass the sample slide 3 times back and forth over the fire light to fix the cells. Add 1-2 drops of phenolic alkaline fuchsin staining solution dropwise to the area where the cells are coated, and stain for 3 min.
本实施例的其余内容与实施例1相同,这里不再赘述。The rest of the content of this embodiment is the same as that of Embodiment 1, and will not be repeated here.
实施例3Example 3
本实施例与实施例1或2的不同之处在于,本实施例的所述巨大芽孢杆菌D122的固氮酶活性为520 nmol/(mL·h),其在生长代谢过程中可以产生吲哚乙酸,吲哚乙酸的分泌量为120mg/L。The difference between this example and Example 1 or 2 is that the nitrogenase activity of the Bacillus megaterium D122 in this example is 520 nmol/(mL·h), which can produce indoleacetic acid in the process of growth and metabolism , the secretion of indoleacetic acid was 120 mg/L.
所述巨大芽孢杆菌D122菌剂,测定初始菌数为2.5亿/mL。For the Bacillus megaterium D122 bacterial preparation, the initial bacterial count was determined to be 250 million/mL.
所述步骤(4)中氯化钠的质量浓度为6.5%,乙酸钠的质量浓度为1.5%。In the step (4), the mass concentration of sodium chloride is 6.5%, and the mass concentration of sodium acetate is 1.5%.
所述步骤(1)中,分离筛选培养基由以下质量的原料制成:CaCO3 1.2g,MgSO4·7H2O 0.8g,K2HPO4 1.5g,NaCl 0.2g,FeSO4·7H2O 0.002g,NaMO4·2H2O 0. 06g,蔗糖6g,琼脂18g,蒸馏水1000ml,分离筛选培养基的pH为7.2。In the step (1), the separation and screening medium is made from the following raw materials: CaCO 3 1.2g, MgSO 4 ·7H 2 O 0.8g, K 2 HPO 4 1.5g, NaCl 0.2g, FeSO 4 ·7H 2 O 0.002g, NaMO 4 ·2H 2 O 0.06g, sucrose 6g, agar 18g, distilled water 1000ml, the pH of the separation and screening medium was 7.2.
本实施例的其余内容与实施例1或2相同,这里不再赘述。The rest of the content of this embodiment is the same as that of
实施例4Example 4
本实施例与实施例1或2的不同之处在于,本实施例的所述巨大芽孢杆菌D122的固氮酶活性为550 nmol/(mL·h),其在生长代谢过程中可以产生吲哚乙酸,吲哚乙酸的分泌量为150mg/L。The difference between this example and Example 1 or 2 is that the nitrogenase activity of the Bacillus megaterium D122 in this example is 550 nmol/(mL·h), which can produce indoleacetic acid in the process of growth and metabolism , the secretion of indoleacetic acid was 150 mg/L.
所述巨大芽孢杆菌D122菌剂,测定初始菌数为3亿/mL。For the Bacillus megaterium D122 bacterial preparation, the initial bacterial count was determined to be 300 million/mL.
所述步骤(4)中氯化钠的质量浓度为7%,乙酸钠的质量浓度为1.5%。In the step (4), the mass concentration of sodium chloride is 7%, and the mass concentration of sodium acetate is 1.5%.
所述步骤(1)中,分离筛选培养基由以下质量的原料制成:CaCO3 1.3g,MgSO4·7H2O 1.0g,K2HPO4 1.8g,NaCl 0.3g,FeSO4·7H2O 0.004g,NaMO4·2H2O 0. 09g,蔗糖8g,琼脂19g,蒸馏水1000ml,分离筛选培养基的pH为 7.3。In the step (1), the separation and screening medium is made from the following raw materials: CaCO 3 1.3 g, MgSO 4 ·7H 2 O 1.0 g, K 2 HPO 4 1.8 g, NaCl 0.3 g, FeSO 4 ·7H 2 O 0.004g, NaMO 4 ·2H 2 O 0.09g, sucrose 8g, agar 19g, distilled water 1000ml, the pH of the separation and screening medium was 7.3.
本实施例的其余内容与实施例1或2相同,这里不再赘述。The rest of the content of this embodiment is the same as that of
实施例5Example 5
本实施例与实施例1或2的不同之处在于,本实施例的所述巨大芽孢杆菌D122的固氮酶活性为580 nmol/(mL·h),其在生长代谢过程中可以产生吲哚乙酸,吲哚乙酸的分泌量为180mg/L。The difference between this example and Example 1 or 2 is that the nitrogenase activity of the Bacillus megaterium D122 in this example is 580 nmol/(mL·h), which can produce indoleacetic acid in the process of growth and metabolism , the secretion of indoleacetic acid was 180 mg/L.
所述巨大芽孢杆菌D122菌剂,测定初始菌数为4.0亿/mL。For the Bacillus megaterium D122 bacterial preparation, the initial bacterial count was determined to be 400 million/mL.
所述步骤(4)中氯化钠的质量浓度为7.5%,乙酸钠的质量浓度为1.5%。In the step (4), the mass concentration of sodium chloride is 7.5%, and the mass concentration of sodium acetate is 1.5%.
所述步骤(1)中,分离筛选培养基由以下质量的原料制成:CaCO3 1.4g,MgSO4·7H2O 1.2g,K2HPO4 2.0g,NaCl 0.4g,FeSO4·7H2O 0.005g,NaMO4·2H2O 0.1g,蔗糖10g,琼脂20g,蒸馏水1000ml,分离筛选培养基的pH为7.4。In the step (1), the separation and screening medium is made of the following raw materials: CaCO 3 1.4g, MgSO 4 ·7H 2 O 1.2g, K 2 HPO 4 2.0g, NaCl 0.4g, FeSO 4 ·7H 2 O 0.005g, NaMO 4 ·2H 2 O 0.1g, sucrose 10g, agar 20g, distilled water 1000ml, and the pH of the separation and screening medium was 7.4.
本实施例的其余内容与实施例1或2相同,这里不再赘述。The rest of the content of this embodiment is the same as that of
本发明的巨大芽孢杆菌D122的16SrDNA序列菌种鉴定Species identification of the 16S rDNA sequence of Bacillus megaterium D122 of the present invention
细菌的个体微小,形态简单,传统方法鉴定细菌常根据它们在生理生化上的不同反应作为分类鉴定的主要依据。20世纪70年代后期以来,国际上通用的“正式的”或“官方的”细菌分类方法是以《伯杰氏鉴定细菌学手册》为依据。在生理生化鉴定中,通常会出现一个或者几个生理指标不符合该菌种所具有的独特性质,难以明确对该菌株进行鉴定。目前,细菌鉴定的方法通常将菌株的生理生化指标与分子生物学特性相结合,得出较为可靠地结论。其中DNA序列分析的16S rRNA基因进化发育系统已经成为目前国际上细菌多相分类鉴定常用的技术手段(Kim et al,2004;Prap et al,1997)。Bacteria are small in size and simple in shape. Traditional methods of identifying bacteria are often based on their different physiological and biochemical responses as the main basis for classification and identification. Since the late 1970s, the internationally accepted "official" or "official" classification of bacteria has been based on the Bergey's Manual of Identification Bacteriology. In physiological and biochemical identification, one or several physiological indicators usually do not conform to the unique properties of the strain, and it is difficult to identify the strain clearly. At present, the method of bacterial identification usually combines the physiological and biochemical indicators of the strain with the molecular biological characteristics, and draws relatively reliable conclusions. Among them, the 16S rRNA gene evolution and development system based on DNA sequence analysis has become a commonly used technical means for the identification of bacterial heterogeneity in the world (Kim et al, 2004; Prap et al, 1997).
核糖体16S rDNA基因序列全长约1550bp,是由交替的保守区和可变区组成。利用保守区域设计的通用引物,可以扩增出所有细菌的16S rDNA片段。16S rDNA序列分析技术的基本原理是从微生物样本中提取16S rDNA片段,通过克隆、测序或酶切、探针杂交获得16S rDNA的序列信息,再与16S rDNA数据库的序列数据或者其他数据进行比较,确定其在进化树中的位置,从而鉴定样本中可能存在的微生物种类。利用16S rDNA片段保守区域设计的通用引物,不会对非细菌的DNA互补,而细菌的16S rDNA可变区的差异可以用来区分不同的菌。因此通过对某菌株16S rDNA序列测定来获得最终鉴定证明的做法是被普遍认可的。The ribosomal 16S rDNA gene sequence is about 1550 bp in length and consists of alternating conserved and variable regions. All bacterial 16S rDNA fragments can be amplified using universal primers designed in conserved regions. The basic principle of 16S rDNA sequence analysis technology is to extract 16S rDNA fragments from microbial samples, obtain the sequence information of 16S rDNA through cloning, sequencing or enzyme digestion, and probe hybridization, and then compare with the sequence data of 16S rDNA database or other data, Determine its position in the evolutionary tree to identify possible microbial species present in the sample. Universal primers designed using the conserved regions of 16S rDNA fragments will not complement non-bacterial DNA, while differences in bacterial 16S rDNA variable regions can be used to distinguish different bacteria. Therefore, it is generally accepted that the final identification certificate is obtained by sequencing the 16S rDNA of a certain strain.
1、方法:1. Method:
(1)PCR反应体系(25 μL):(1) PCR reaction system (25 μL):
10×PCR Buffer 2.5μL10×PCR Buffer 2.5μL
dNTP(2.5mM) m 2.0μLdNTP (2.5mM) m 2.0μL
引物 27F(10μM) 0.5μLPrimer 27F (10μM) 0.5μL
引物 1492R(10μM) 0.5μLPrimer 1492R (10μM) 0.5μL
DNA模板 100ngDNA template 100ng
Taq 酶(5U/μL) 0.5μLTaq enzyme (5U/μL) 0.5μL
ddH2O 19μLddH 2 O 19 μL
(2)PCR 反应条件 :95℃预变性 5 min,95℃ 变性 30 s,58℃ 退火 30 s,72℃延伸 80 s,35 个循环,72℃延伸 10 min。使用ABI 3730 xl DNA分析仪(应用生物系统公司) 进行DNA测序。(2) PCR reaction conditions: pre-denaturation at 95°C for 5 min, denaturation at 95°C for 30 s, annealing at 58°C for 30 s, extension at 72°C for 80 s, 35 cycles, and extension at 72°C for 10 min. DNA sequencing was performed using an ABI 3730 xl DNA Analyzer (Applied Biosystems).
2、测序结果2. Sequencing results
tcgagcgaac tgattagaag cttgcttcta tgacgttagc ggcggacggg tgagtaacactcgagcgaac tgattagaag cttgcttcta tgacgttagc ggcggacggg tgagtaacac
gtgggcaacc tgcctgtaag actgggataa cttcgggaaa ccgaagctaa taccggatag gtgggcaacc tgcctgtaag actgggataa cttcgggaaa ccgaagctaa taccggatag
gatcttctcc ttcatgggag atgattgaaa gatggtttcg gctatcactt acagatgggc gatcttctcc ttcatgggag atgattgaaa gatggtttcg gctatcactt acagatgggc
ccgcggtgca ttagctagtt ggtgaggtaa cggctcacca aggcaacgat gcatagccga ccgcggtgca ttagctagtt ggtgaggtaa cggctcacca aggcaacgat gcatagccga
cctgagaggg tgatcggcca cactgggact gagacacggc ccagactcct acgggaggca cctgagaggg tgatcggcca cactgggact gagacacggc ccagactcct acgggaggca
gcagtaggga atcttccgca atggacgaaa gtctgacgga gcaacgccgc gtgagtgatg gcagtaggga atcttccgca atggacgaaa gtctgacgga gcaacgccgc gtgagtgatg
aaggctttcg ggtcgtaaaa ctctgttgtt agggaagaac aagtacgaga gtaactgctc aaggctttcg ggtcgtaaaa ctctgttgtt agggaagaac aagtacgaga gtaactgctc
gtaccttgac ggtacctaac cagaaagcca cggctaacta cgtgccagca gccgcggtaa gtaccttgac ggtacctaac cagaaagcca cggctaacta cgtgccagca gccgcggtaa
tacgtaggtg gcaagcgtta tccggaatta ttgggcgtaa agcgcgcgca ggcggtttct tacgtaggtg gcaagcgtta tccggaatta ttgggcgtaa agcgcgcgca ggcggtttct
taagtctgat gtgaaagccc acggctcaac cgtggagggt cattggaaac tggggaactt taagtctgat gtgaaagccc acggctcaac cgtggagggt cattggaaac tggggaactt
gagtgcagaa gagaaaagcg gaattccacg tgtagcggtg aaatgcgtag agatgtggag gagtgcagaa gagaaaagcg gaattccacg tgtagcggtg aaatgcgtag agatgtggag
gaacaccagt ggcgaaggcg gctttttggt ctgtaactga cgctgaggcg cgaaagcgtg gaacaccagt ggcgaaggcg gctttttggt ctgtaactga cgctgaggcg cgaaagcgtg
gggagcaaac aggattagat accctggtag tccacgccgt aaacgatgag tgctaagtgt gggagcaaac aggattagat accctggtag tccacgccgt aaacgatgag tgctaagtgt
tagagggttt ccgcccttta gtgctgcagc taacgcatta agcactccgc ctggggagta tagagggttt ccgcccttta gtgctgcagc taacgcatta agcactccgc ctggggagta
cggtcgcaag actgaaactc aaaggaattg acgggggccc gcacaagcgg tggagcatgt cggtcgcaag actgaaactc aaaggaattg acgggggccc gcacaagcgg tggagcatgt
ggtttaattc gaagcaacgc gaagaacctt accaggtctt gacatcctct gacaactcta ggtttaattc gaagcaacgc gaagaacctt accaggtctt gacatcctct gacaactcta
gagatagagc gttccccttc gggggacaga gtgacaggtg gtgcatggtt gtcgtcagct gagatagagc gttccccttc gggggacaga gtgacaggtg gtgcatggtt gtcgtcagct
cgtgtcgtga gatgttgggt taagtcccgc aacgagcgca acccttgatc ttagttgcca cgtgtcgtga gatgttgggt taagtcccgc aacgagcgca acccttgatc ttagttgcca
gcatttagtt gggcactcta aggtgactgc cggtgacaaa ccggaggaag gtggggatga gcatttagtt gggcactcta aggtgactgc cggtgacaaa ccggaggaag gtggggatga
cgtcaaatca tcatgcccct tatgacctgg gctacacacg tgctacaatg gatggtacaa cgtcaaatca tcatgcccct tatgacctgg gctacacacg tgctacaatg gatggtacaa
agggctgcaa gaccgcgagg tcaagccaat cccataaaac cattctcagt tcggattgta agggctgcaa gaccgcgagg tcaagccaat cccataaaac cattctcagt tcggattgta
ggctgcaact cgcctacatg aagctggaat cgctagtaat cgcggatcag catgccgcgg ggctgcaact cgcctacatg aagctggaat cgctagtaat cgcggatcag catgccgcgg
tgaatacgtt cccgggcctt gtacacaccg cccgtcacac cacgagagtt tgtaacaccc tgaatacgtt cccgggcctt gtacacaccg cccgtcacac cacgagagtt tgtaacaccc
gaagtcggtg gagtaaccgt aag gaagtcggtg gagtaaccgt aag
3、同源性分析3. Homology analysis
鉴定本细菌为Bacillus megaterium,巨大芽孢杆菌。The bacteria were identified as Bacillus megaterium , Bacillus megaterium.
本发明由广东省引进创新创业团队项目资助研发,制得的巨大芽孢杆菌D122及其菌剂具有广阔的市场前景,经济效益高。The invention is researched and developed by the project of an innovative and entrepreneurial team introduced by Guangdong Province, and the prepared Bacillus megaterium D122 and its inoculum have broad market prospects and high economic benefits.
最后应当说明的是,以上实施例仅用以说明本发明的技术方案,而非对本发明保护范围的限制,尽管参照较佳实施例对本发明作了详细地说明,本领域的普通技术人员应当理解,可以对本发明的技术方案进行修改或者等同替换,而不脱离本发明技术方案的实质和范围。Finally, it should be noted that the above embodiments are only used to illustrate the technical solutions of the present invention, but not to limit the protection scope of the present invention. Although the present invention has been described in detail with reference to the preferred embodiments, those of ordinary skill in the art should understand that , the technical solutions of the present invention may be modified or equivalently replaced without departing from the spirit and scope of the technical solutions of the present invention.
<0001><0001>
SEQUENCE LISTING SEQUENCE LISTING
<110>东莞市保得生物工程有限公司<110> Dongguan Baode Biological Engineering Co., Ltd.
<120>一种巨大芽孢杆菌D122及其菌剂和菌剂制备方法<120> A kind of Bacillus megaterium D122 and its inoculum and preparation method of inoculum
<130>0<130>0
<160>1<160>1
<170>PatentIn version 3.3<170>PatentIn version 3.3
<210>1<210>1
<211>1403<211>1403
<212>DNA<212> DNA
<213>巨大芽孢杆菌(Bacillus megaterium)D122的16s rDNA基因序列<213> 16s rDNA gene sequence of Bacillus megaterium D122
<400>1<400>1
tcgagcgaac tgattagaag cttgcttcta tgacgttagc ggcggacggg tgagtaacac 60 tcgagcgaac tgattagaag cttgcttcta tgacgttagc ggcggacggg tgagtaacac 60
gtgggcaacc tgcctgtaag actgggataa cttcgggaaa ccgaagctaa taccggatag 120 gtgggcaacc tgcctgtaag actgggataa cttcgggaaa ccgaagctaa taccggatag 120
gatcttctcc ttcatgggag atgattgaaa gatggtttcg gctatcactt acagatgggc 180 gatcttctcc ttcatgggag atgattgaaa gatggtttcg gctatcactt acagatgggc 180
ccgcggtgca ttagctagtt ggtgaggtaa cggctcacca aggcaacgat gcatagccga 240 ccgcggtgca ttagctagtt ggtgaggtaa cggctcacca aggcaacgat gcatagccga 240
cctgagaggg tgatcggcca cactgggact gagacacggc ccagactcct acgggaggca 300 cctgagaggg tgatcggcca cactgggact gagacacggc ccagactcct acgggaggca 300
gcagtaggga atcttccgca atggacgaaa gtctgacgga gcaacgccgc gtgagtgatg 360 gcagtaggga atcttccgca atggacgaaa gtctgacgga gcaacgccgc gtgagtgatg 360
aaggctttcg ggtcgtaaaa ctctgttgtt agggaagaac aagtacgaga gtaactgctc 420 aaggctttcg ggtcgtaaaa ctctgttgtt agggaagaac aagtacgaga gtaactgctc 420
gtaccttgac ggtacctaac cagaaagcca cggctaacta cgtgccagca gccgcggtaa 480 gtaccttgac ggtacctaac cagaaagcca cggctaacta cgtgccagca gccgcggtaa 480
tacgtaggtg gcaagcgtta tccggaatta ttgggcgtaa agcgcgcgca ggcggtttct 540 tacgtaggtg gcaagcgtta tccggaatta ttgggcgtaa agcgcgcgca ggcggtttct 540
taagtctgat gtgaaagccc acggctcaac cgtggagggt cattggaaac tggggaactt 600 taagtctgat gtgaaagccc acggctcaac cgtggagggt cattggaaac tggggaactt 600
gagtgcagaa gagaaaagcg gaattccacg tgtagcggtg aaatgcgtag agatgtggag 660 gagtgcagaa gagaaaagcg gaattccacg tgtagcggtg aaatgcgtag agatgtggag 660
gaacaccagt ggcgaaggcg gctttttggt ctgtaactga cgctgaggcg cgaaagcgtg 720 gaacaccagt ggcgaaggcg gctttttggt ctgtaactga cgctgaggcg cgaaagcgtg 720
gggagcaaac aggattagat accctggtag tccacgccgt aaacgatgag tgctaagtgt 780 gggagcaaac aggattagat accctggtag tccacgccgt aaacgatgag tgctaagtgt 780
tagagggttt ccgcccttta gtgctgcagc taacgcatta agcactccgc ctggggagta 840 tagagggttt ccgcccttta gtgctgcagc taacgcatta agcactccgc ctggggagta 840
cggtcgcaag actgaaactc aaaggaattg acgggggccc gcacaagcgg tggagcatgt 900 cggtcgcaag actgaaactc aaaggaattg acgggggccc gcacaagcgg tggagcatgt 900
ggtttaattc gaagcaacgc gaagaacctt accaggtctt gacatcctct gacaactcta 960 ggtttaattc gaagcaacgc gaagaacctt accaggtctt gacatcctct gacaactcta 960
gagatagagc gttccccttc gggggacaga gtgacaggtg gtgcatggtt gtcgtcagct 1020 gagatagagc gttccccttc gggggacaga gtgacaggtg gtgcatggtt gtcgtcagct 1020
cgtgtcgtga gatgttgggt taagtcccgc aacgagcgca acccttgatc ttagttgcca 1080 cgtgtcgtga gatgttgggt taagtcccgc aacgagcgca acccttgatc ttagttgcca 1080
gcatttagtt gggcactcta aggtgactgc cggtgacaaa ccggaggaag gtggggatga 1140 gcatttagtt gggcactcta aggtgactgc cggtgacaaa ccggaggaag gtggggatga 1140
cgtcaaatca tcatgcccct tatgacctgg gctacacacg tgctacaatg gatggtacaa 1200 cgtcaaatca tcatgcccct tatgacctgg gctacacacg tgctacaatg gatggtacaa 1200
agggctgcaa gaccgcgagg tcaagccaat cccataaaac cattctcagt tcggattgta 1260 agggctgcaa gaccgcgagg tcaagccaat cccataaaac cattctcagt tcggattgta 1260
ggctgcaact cgcctacatg aagctggaat cgctagtaat cgcggatcag catgccgcgg 1320 ggctgcaact cgcctacatg aagctggaat cgctagtaat cgcggatcag catgccgcgg 1320
tgaatacgtt cccgggcctt gtacacaccg cccgtcacac cacgagagtt tgtaacaccc 1380 tgaatacgtt cccgggcctt gtacacaccg cccgtcacac cacgagagtt tgtaacaccc 1380
gaagtcggtg gagtaaccgt aag 1403 gaagtcggtg gagtaaccgt aag 1403
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