CN105925629A - Method for synthesizing butanediamine through microbial transformation - Google Patents
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Abstract
Description
技术领域technical field
本发明属于基因工程菌技术领域,尤其是一种通过微生物转化合成丁二胺的方法,该方法通过过表达鸟氨酸脱羧酶对发酵液中鸟氨酸进行生物转化,从而有效提高丁二胺的产量。The invention belongs to the technical field of genetically engineered bacteria, in particular to a method for synthesizing butanediamine through microbial conversion. The method performs biotransformation of ornithine in fermentation broth by overexpressing ornithine decarboxylase, thereby effectively increasing the production of butanediamine output.
背景技术Background technique
1,4-丁二胺(butanediamine,简称丁二胺),又名腐胺(putrescine),是一类含氮、带正电荷的小分子脂肪族化合物,是生物胺类(包括腐胺、精胺、亚精胺和尸胺等)中最简单的一种。在细胞内,丁二胺是鸟氨酸在鸟氨酸脱羧酶的作用下脱羧产生的,与赖氨酸的脱羧产物尸胺一样都是尸体腐败产生的气味中的成分,作为一种毒碱存在于腐败物中。丁二胺的应用十分广泛。在农业上丁二胺适当添加可以减缓瓜果蔬菜腐烂的时间,从而延长保存时间;在医学上,丁二胺作为一些疾病的判断指标;在工业上,丁二胺可以与己二酸聚合合成新型优质的聚酰胺--尼龙46,具有重要的工业用途。1,4-Butanediamine (butanediamine for short), also known as putrescine, is a kind of nitrogen-containing, positively charged small molecule aliphatic compound, and is a biological amine (including putrescine, Amine, spermidine and cadaverine, etc.) in the simplest one. In the cell, butanediamine is produced by the decarboxylation of ornithine under the action of ornithine decarboxylase. Like the decarboxylation product of lysine, cadaverine, it is a component in the odor of corpse decay, and is a toxic base. present in spoilage. Butylenediamine is widely used. Appropriate addition of butanediamine in agriculture can slow down the rotting time of fruits and vegetables, thereby prolonging the storage time; in medicine, butanediamine is used as a judgment indicator for some diseases; in industry, butanediamine can be synthesized by polymerization with adipic acid A new high-quality polyamide, nylon 46, has important industrial uses.
目前合成丁二胺的方法有化学合成法和生物合成法。化学合成法条件苛刻、污染环境、破坏生态,生物合成法和微生物转化法可直接规模化制备人类所需产品是最经济、环保和最有前途的方法,是研究的方向和热点。At present, the methods for synthesizing butanediamine include chemical synthesis and biosynthesis. The chemical synthesis method has harsh conditions, pollutes the environment, and destroys the ecology. The biosynthesis method and microbial transformation method can directly produce the products needed by human beings on a large scale.
生物合成法生产丁二胺就是通过微生物利用糖类发酵直接合成丁二胺。为了提高丁二胺的产量,根据大肠杆菌的丁二胺合成调节情况。对丁二胺合成的代谢途径进行改造。专利公开文献CN 103403147A报道了利用利用谷氨酸棒杆菌重组菌株发酵糖类合成丁二胺的方法:通过阻断谷氨酸棒杆菌的自鸟氨酸至精氨酸的生物合成途径,增加细胞内谷氨酸水平,增强自谷氨酸至鸟氨酸的生物合成途径并引入细胞外鸟氨酸脱梭酶生产丁二胺。专利公开文献WO06/005603也报道了通过通过去除降解或使用腐胺的亚精胺和乙酰腐胺合成途径来提高丁二胺的产量。但由于胞内合成丁二胺不能有效分泌到细胞外,造成在细胞内的积累而抑制赖氨酸脱羧酶的活性,影响丁二胺的产量。The production of butanediamine by biosynthesis is to directly synthesize butanediamine through the fermentation of sugar by microorganisms. In order to increase the production of butanediamine, according to the regulation of butanediamine synthesis in Escherichia coli. Modification of the metabolic pathway for the synthesis of butanediamine. Patent publication CN 103403147A reports a method for synthesizing butanediamine by using a recombinant strain of Corynebacterium glutamicum to ferment sugars: by blocking the biosynthesis pathway from ornithine to arginine of Corynebacterium glutamicum, increasing the Intracellular glutamate levels, enhancement of the biosynthetic pathway from glutamate to ornithine and introduction of extracellular ornithine deshuttle to produce butanediamine. Patent Publication WO06/005603 also reports the improvement of butanediamine production by removing degradation or using putrescine's spermidine and acetylputrescine synthesis pathways. However, due to the intracellular synthesis of butanediamine cannot be effectively secreted outside the cell, resulting in accumulation in the cell and inhibiting the activity of lysine decarboxylase, affecting the production of butanediamine.
微生物转化法就是利用微生物细胞表达鸟氨酸脱羧酶,将投入的底物鸟氨酸转化成丁二胺。本发明专利申请通过构建大肠杆菌重组菌株分泌表达鸟氨酸脱羧酶至大肠杆菌周质腔中,然后向发酵液中投入一定浓度的底物鸟氨酸,周质腔中的鸟氨酸脱羧酶将鸟氨酸转化为丁二胺,避免了丁二胺向细胞外转运的难题。因此与上述专利公开文献存在本质的不同。The microbial conversion method is to use microbial cells to express ornithine decarboxylase to convert the input substrate ornithine into butanediamine. The patent application of the present invention secretes and expresses ornithine decarboxylase into the periplasmic cavity of Escherichia coli by constructing a recombinant strain of E. coli, and then puts a certain concentration of substrate ornithine into the fermentation broth, and the ornithine decarboxylase in the Converting ornithine into butanediamine avoids the problem of extracellular transport of butanediamine. Therefore, there is an essential difference from the above-mentioned patent publications.
发明内容Contents of the invention
本发明的目的在于克服现有技术的不足之处,提供一种通过微生物转化合成丁二胺的方法,该方法构建能分泌表达鸟氨酸脱羧酶基因的微生物重组菌株,发酵该重组菌株并诱导鸟氨酸脱羧酶基因分泌表达至周质腔中,把投入到发酵液中的鸟氨酸转化成丁二胺,,解决了丁二胺向细胞外转运的难题。The purpose of the present invention is to overcome the deficiencies of the prior art, to provide a method for the synthesis of butanediamine through microbial transformation, the method constructs microbial recombinant strains that can secrete and express ornithine decarboxylase gene, ferment the recombinant bacterial strain and induce The ornithine decarboxylase gene is secreted and expressed in the periplasmic cavity, and the ornithine put into the fermentation broth is converted into butanediamine, which solves the problem of the extracellular transport of butanediamine.
本发明解决上述技术问题所采用的技术方案为:The technical solution adopted by the present invention to solve the problems of the technologies described above is:
一种通过微生物转化合成丁二胺的方法,所述方法利用微生物重组菌株表达鸟氨酸脱羧酶基因,将底物鸟氨酸转化成丁二胺,得丁二胺。The invention discloses a method for synthesizing butanediamine through microbial conversion. The method utilizes microbial recombinant strains to express ornithine decarboxylase gene, and converts substrate ornithine into butanediamine to obtain butanediamine.
而且,步骤如下:And, the steps are as follows:
构建能够表达鸟氨酸脱羧酶基因的微生物重组菌株,发酵该微生物重组菌株诱导鸟氨酸脱羧酶基因的表达,得发酵液,然后向表达鸟氨酸脱羧酶的发酵液中加入鸟氨酸,鸟氨酸脱羧酶将底物鸟氨酸转化成丁二胺,得丁二胺。Constructing a microbial recombinant strain capable of expressing the ornithine decarboxylase gene, fermenting the microbial recombinant strain to induce the expression of the ornithine decarboxylase gene to obtain a fermentation broth, and then adding ornithine to the fermentation broth expressing the ornithine decarboxylase, Ornithine decarboxylase converts the substrate ornithine into butanediamine to obtain butanediamine.
而且,所述鸟氨酸的浓度为5-40g/L。Moreover, the concentration of the ornithine is 5-40g/L.
而且,所述鸟氨酸浓度为10-30g/L。Moreover, the ornithine concentration is 10-30 g/L.
而且,所述鸟氨酸浓度为15-25g/L。Moreover, the ornithine concentration is 15-25g/L.
而且,所述微生物重组菌株为大肠杆菌重组菌株、谷氨酸棒杆菌重组菌株、谷草芽孢杆菌重组菌株和乳酸菌重组菌株;Moreover, the microbial recombinant strains are recombinant strains of Escherichia coli, recombinant strains of Corynebacterium glutamicum, recombinant strains of Bacillus aspartate and recombinant strains of lactic acid bacteria;
或者,所述鸟氨酸脱羧酶基因来源于大肠杆菌的speC基因。Alternatively, the ornithine decarboxylase gene is derived from the speC gene of Escherichia coli.
而且,所述微生物重组菌株的构建方法如下:And, the construction method of described microbial recombinant bacterial strain is as follows:
将鸟氨酸脱羧酶基因连接到微生物的分泌表达载体上,并转化微生物,筛选得到能分泌表达鸟氨酸脱羧酶基因的微生物重组菌株。The ornithine decarboxylase gene is connected to the secretion expression carrier of the microorganism, and the microorganism is transformed, and the recombinant strain of the microorganism capable of secreting and expressing the ornithine decarboxylase gene is obtained by screening.
而且,所述鸟氨酸脱羧酶基因来源于微生物或高等植物。Moreover, the ornithine decarboxylase gene is derived from microorganisms or higher plants.
而且,所述微生物为大肠杆菌、乳酸菌(Lactobacillus)、粗球孢子菌(Coccidioidesimmits)或摩氏摩根菌(Morganellamorganii);或者,所述高等植物为曼陀罗、朝鲜蓟、冰叶日中花、兰花或白杨。Moreover, the microorganism is Escherichia coli, lactic acid bacteria (Lactobacillus), coccidioides immits (Coccidioidesimmits) or Morganella morganii (Morganellamorganii); or, the higher plant is datura, artichoke, ice leaf sunflower, Orchid or aspen.
而且,步骤如下:And, the steps are as follows:
⑴产丁二胺工程菌株PUT-C1的构建⑴Construction of butanediamine-producing engineering strain PUT-C1
利用试剂盒提取大肠杆菌的基因组DNA,作为扩增鸟氨酸脱羧酶基因speC的模板;根据NCBI提供的大肠杆菌鸟氨酸脱羧酶基因speC序列设计引物,分别扩增出speC;然后speC片段通过EcoRI和Nco I酶切后克隆至pET22b+相同酶切位点之间;转化大肠杆菌E.coliBL21(DE3),经过筛选,获得产丁二胺大肠杆菌重组菌PUT-C1;Use the kit to extract the genomic DNA of Escherichia coli as a template for amplifying the ornithine decarboxylase gene speC; design primers according to the speC sequence of the E. coli ornithine decarboxylase gene speC provided by NCBI, and amplify speC respectively; then the speC fragment is passed through After EcoRI and Nco I digestion, clone into pET22b+ between the same restriction sites; transform E. coli E.coliBL21(DE3), and obtain butanediamine-producing E. coli recombinant strain PUT-C1 after screening;
构建重组菌PUT-C1所设计的引物序列如下(SEQUENCE1、SEQUENCE2):The primer sequences designed to construct the recombinant strain PUT-C1 are as follows (SEQUENCE1, SEQUENCE2):
⑵鸟氨酸脱羧酶SpeC的酶活测定⑵Determination of the enzyme activity of ornithine decarboxylase SpeC
①粗酶液的制备① Preparation of crude enzyme solution
1)从平板上取一环大肠杆菌重组菌PUT-C1接种于相应抗性的50mL液体LB中,在37℃、200r/min摇床上过夜培养12h;1) Take a loop of recombinant Escherichia coli PUT-C1 from the plate and inoculate it in 50mL liquid LB with corresponding resistance, and culture it overnight at 37°C and 200r/min on a shaker for 12h;
2)按1%接种量转接入新的LB液体培养基中,在37℃、200rpm的条件下在摇床上培养;2) transfer 1% of the inoculum into a new LB liquid medium, and culture on a shaker at 37°C and 200rpm;
3)当OD600=1.0时,加入终浓度1mM IPTG,然后在37℃,200r/min的条件下诱导6h;3) When OD 600 =1.0, add a final concentration of 1mM IPTG, and then induce at 37°C and 200r/min for 6h;
4)取30mL培养液于50mL离心管中,6000r/min离心8min;4) Take 30mL culture solution in a 50mL centrifuge tube and centrifuge at 6000r/min for 8min;
5)弃上清,加入10mL无菌磷酸盐缓冲溶液,涡旋振荡混匀,补加PBS至20mL,6000r/min离心8min;重复步骤一次;5) Discard the supernatant, add 10 mL of sterile phosphate buffer solution, vortex to mix, add PBS to 20 mL, centrifuge at 6000 r/min for 8 min; repeat the steps once;
6)加入10mL PBS,细胞悬液超声处理30min,超声2s,间歇3s,功率40%;6) Add 10mL PBS, sonicate the cell suspension for 30min, sonicate for 2s, pause for 3s, power 40%;
7)4℃低温下8000r/min离心15min,除去细胞碎片上清即为粗酶液;7) Centrifuge at 8000r/min at 4°C for 15min, remove the supernatant of cell debris and obtain the crude enzyme solution;
②鸟氨酸脱羧酶SpeC的SDS-PAGE分析② SDS-PAGE analysis of ornithine decarboxylase SpeC
将待用的凝胶浸泡在缓冲液中,用微量进样器按号向凝胶孔中加样;接上电泳仪,打开电源,调节电流至20-30mA,保持恒流,待样品迁移至分离胶下端1cm处时,关闭电源;电泳完毕后,取下电泳凝胶,并在凝胶的一角小心切去一小块作为标记,倒入考马斯亮蓝染色液进行染色1h;倾倒出染色液,将凝胶在水中漂洗数次;加入脱色液,开始每隔2h更换脱色液一次,直至凝胶背景清晰;Soak the gel to be used in the buffer solution, and use a micro-sampler to add samples to the gel holes according to the number; connect the electrophoresis instrument, turn on the power, adjust the current to 20-30mA, and maintain a constant current until the sample migrates to When the separation gel is 1cm lower, turn off the power; after the electrophoresis is completed, remove the electrophoresis gel, and carefully cut off a small piece at the corner of the gel as a mark, pour the Coomassie brilliant blue staining solution for staining for 1 hour; pour out the staining solution , rinse the gel in water for several times; add decolorization solution, and start to replace the decolorization solution every 2 hours until the background of the gel is clear;
PUT-C1进行诱导表达及SDS-PAGE分析;PUT-C1 induced expression and SDS-PAGE analysis;
③酶活测定③Enzyme activity assay
1)取800μL不同pH的磷酸缓冲液于5mL无菌具塞刻度管中,至于37℃水浴预热5min;平行3个;1) Take 800 μL of phosphate buffer solution with different pH in a 5 mL sterile stoppered graduated tube, and preheat it in a 37°C water bath for 5 minutes; 3 in parallel;
2)加入100μL粗酶液,加入L-精氨酸母液100μL,开始计时30min;对照组用无菌水替代L-精氨酸;2) Add 100 μL of crude enzyme solution, add 100 μL of L-arginine mother solution, and start timing for 30 minutes; the control group uses sterile water instead of L-arginine;
3)将具塞刻度管置于冰上,迅速加入500μL 2MNaOH终止反应;3) Place the stoppered graduated tube on ice, and quickly add 500 μL of 2M NaOH to terminate the reaction;
4)衍生,上柱检测丁二胺的生成量;4) Derivatization, the production amount of butanediamine is detected on the column;
④鸟氨酸脱羧酶活性检测结果④ Detection results of ornithine decarboxylase activity
根据HPLC检测丁二胺转化结果,检测鸟氨酸脱羧酶SpeC的活性;According to the HPLC detection butanediamine conversion result, the activity of ornithine decarboxylase SpeC is detected;
⑶重组菌株PUT-C1的摇瓶发酵及丁胺产量的测定(3) Shake flask fermentation of recombinant strain PUT-C1 and determination of butylamine production
①摇瓶发酵① Shake bottle fermentation
在平板上挑取一环单克隆重组菌株接种到含有5mL LB培养基中培养10-12h,以1%的接种量接入到装有50mL LB培养基的250mL三角瓶中,37℃,200r/min培养至OD600=1.0,加入终浓度1mM IPTG,然后在37℃,200r/min的条件下诱导6h;投入底物鸟氨酸,其中鸟氨酸的浓度分别为0g/L、10g/L、20g/L、30g/L和40g/L,每组平行三个;37℃,200r/min培养12h;发酵液12000r/min离心5min,取上清液4℃保存;Pick a ring of monoclonal recombinant strains on the plate and inoculate them into 5mL LB medium for 10-12h, and insert 1% of the inoculum into a 250mL Erlenmeyer flask containing 50mL LB medium, at 37°C, 200r/h Min culture to OD 600 = 1.0, add final concentration of 1mM IPTG, then induce at 37°C, 200r/min for 6h; add substrate ornithine, the concentration of ornithine is 0g/L, 10g/L respectively , 20g/L, 30g/L and 40g/L, three in parallel for each group; culture at 37°C, 200r/min for 12h; centrifuge the fermentation broth at 12000r/min for 5min, take the supernatant and store it at 4°C;
②HPLC检测丁二胺② HPLC detection of butanediamine
实验采用国标法检测丁二胺的含量,通过对水样进行柱前衍生,水样经苯甲酰氯衍生化后用乙醚萃取,萃取物经溶剂转换溶于甲醇后用高效液相色谱紫外检测;In the experiment, the national standard method was used to detect the content of butanediamine. By derivatizing the water sample before the column, the water sample was derivatized with benzoyl chloride and then extracted with ether.
1)样品的衍生和萃取1) Derivatization and extraction of samples
取1mL上清液加入5mL具塞刻度试管中,加入500μL 2mol/LNaOH溶液、10μL苯甲酰氯,37℃水浴振摇20min,隔5min旋涡振荡30s,加入0.5g NaCl、1mL乙醚振荡30s静置分层;把上层乙醚取至另一离心管中,待乙醚挥发完全,加入500μL甲醇溶解,过膜后作为HPLC检测用样;标准溶液的衍生和萃取步骤同样品处理步骤;Take 1 mL of the supernatant and add it to a 5 mL graduated test tube with a stopper, add 500 μL of 2mol/L NaOH solution and 10 μL of benzoyl chloride, shake in a water bath at 37°C for 20 min, vortex for 30 s every 5 min, add 0.5 g of NaCl, 1 mL of diethyl ether and shake for 30 s to separate Take the upper layer of ether into another centrifuge tube. After the ether is completely volatilized, add 500 μL of methanol to dissolve, and pass through the membrane as a sample for HPLC detection; the derivation and extraction steps of the standard solution are the same as the sample processing steps;
2)HPLC测定2) HPLC determination
a色谱条件a Chromatographic conditions
A)色谱柱:C18色谱柱,5μm,4.6×250mm,或性能相当者;A) Chromatographic column: C18 chromatographic column, 5μm, 4.6×250mm, or equivalent;
B)柱温:室温;B) column temperature: room temperature;
C)流动相:A(乙腈),B(0.02mol/L乙酸铵),梯度洗脱条件如下:C) Mobile phase: A (acetonitrile), B (0.02mol/L ammonium acetate), gradient elution conditions are as follows:
D)检测波长:254nm。D) Detection wavelength: 254nm.
E)进样量:10μL;E) Injection volume: 10 μL;
F)流速:1mL/min;F) flow rate: 1mL/min;
b液相色谱分析测定b Liquid chromatography analysis and determination
开机,预热,使用流动相冲洗色谱柱,基线稳定30min后开始进样;Start the machine, preheat it, rinse the chromatographic column with the mobile phase, and start sampling after the baseline is stable for 30 minutes;
将发酵液上清稀释后衍生进行HPLC分析,通过峰面积计算出丁二胺的含量。The supernatant of the fermentation broth was diluted and derivatized for HPLC analysis, and the content of butanediamine was calculated by the peak area.
本发明的优点和积极效果:Advantage and positive effect of the present invention:
本发明方法通过构建大肠杆菌重组菌株分泌表达鸟氨酸脱羧酶至大肠杆菌周质腔中,然后向发酵液中投入一定浓度的底物鸟氨酸,周质腔中的鸟氨酸脱羧酶将鸟氨酸转化为丁二胺,解决了丁二胺向细胞外转运的难题,降低了生产成本,经济环保,操作简单方便,提高了丁二胺的产量。The method of the present invention secretes and expresses ornithine decarboxylase into the periplasmic cavity of Escherichia coli by constructing a recombinant bacterial strain of E. The conversion of ornithine into butanediamine solves the problem of extracellular transport of butanediamine, reduces production costs, is economical and environmentally friendly, and is simple and convenient to operate, increasing the output of butanediamine.
附图说明Description of drawings
图1为本发明中E.coli基因组DNA图;Fig. 1 is E.coli genome DNA figure among the present invention;
图2为本发明中speC的PCR产物图;Fig. 2 is the PCR product figure of speC among the present invention;
图3为本发明中pET22b-speC双酶切结果图;Fig. 3 is the pET22b-speC double enzyme digestion result figure among the present invention;
图4为本发明中诱导表达产物SDS-PAGE分析图;Fig. 4 is the SDS-PAGE analysis chart of the induced expression product in the present invention;
图5为本发明中丁二胺的标准品图;Fig. 5 is the standard product figure of butanediamine in the present invention;
图6为本发明中样品色谱图;Fig. 6 is sample chromatogram among the present invention;
图7为本发明中丁二胺含量的标准曲线图;Fig. 7 is the standard curve figure of butanediamine content in the present invention;
图8为本发明中不同投料量的丁二胺的产量图。Fig. 8 is the output figure of the butanediamine of different charging amounts among the present invention.
具体实施方式detailed description
下面结合实施例,对本发明进一步说明,下述实施例是说明性的,不是限定性的,不能以下述实施例来限定本发明的保护范围。Below in conjunction with the examples, the present invention is further described, the following examples are illustrative, not limiting, and the protection scope of the present invention cannot be limited by the following examples.
本发明中所使用的原料,如无特殊说明,均为常规的市售产品;本发明中所使用的方法,如无特殊说明,均为本领域的常规方法。The raw materials used in the present invention, unless otherwise specified, are conventional commercially available products; the methods used in the present invention, unless otherwise specified, are conventional methods in the art.
本发明所运用的技术手段:Technical means used in the present invention:
本发明的基因序列涉及鸟氨酸脱羧酶基因,其序列为已知序列。质粒pET22b+、分子操作技术、微生物培养技术及丁二胺的检测等,对于本领域的技术人员而言都是公知的。The gene sequence of the present invention relates to the ornithine decarboxylase gene, and its sequence is a known sequence. Plasmid pET22b+, molecular manipulation techniques, microbial culture techniques, detection of butanediamine, etc. are well known to those skilled in the art.
实施例1Example 1
一种通过微生物转化合成丁二胺的方法,所述方法利用微生物重组菌株表达鸟氨酸脱羧酶基因,将底物鸟氨酸转化成丁二胺。The invention discloses a method for synthesizing butanediamine through microbial transformation, the method utilizes microbial recombinant strains to express ornithine decarboxylase gene, and converts substrate ornithine into butanediamine.
步骤可以如下:The steps can be as follows:
构建能够表达鸟氨酸脱羧酶基因的微生物重组菌株,发酵该微生物重组菌株诱导鸟氨酸脱羧酶基因的表达,得发酵液,然后向表达鸟氨酸脱羧酶的发酵液中加入鸟氨酸,鸟氨酸脱羧酶将底物鸟氨酸转化成丁二胺;Constructing a microbial recombinant strain capable of expressing the ornithine decarboxylase gene, fermenting the microbial recombinant strain to induce the expression of the ornithine decarboxylase gene to obtain a fermentation broth, and then adding ornithine to the fermentation broth expressing the ornithine decarboxylase, Ornithine decarboxylase converts the substrate ornithine into butanediamine;
其中,所述鸟氨酸的浓度可以是5-40g/L,优选的鸟氨酸浓度是10-30g/L,更优选的鸟氨酸浓度是15-25g/L。Wherein, the concentration of ornithine may be 5-40g/L, preferably 10-30g/L, and more preferably 15-25g/L.
进一步地,所述微生物重组菌株为大肠杆菌重组菌株、谷氨酸棒杆菌重组菌株、谷草芽孢杆菌重组菌株和乳酸菌重组菌株;Further, the microbial recombinant strains are recombinant strains of Escherichia coli, recombinant strains of Corynebacterium glutamicum, recombinant strains of Bacillus aspartate and recombinant strains of lactic acid bacteria;
或者,所述鸟氨酸脱羧酶基因来源于大肠杆菌的speC基因。Alternatively, the ornithine decarboxylase gene is derived from the speC gene of Escherichia coli.
进一步地,所述微生物重组菌株的构建方法如下:Further, the construction method of the microbial recombinant strain is as follows:
将鸟氨酸脱羧酶基因连接到微生物的分泌表达载体上,并转化微生物,筛选得到能分泌表达鸟氨酸脱羧酶基因的微生物重组菌株。The ornithine decarboxylase gene is connected to the secretion expression carrier of the microorganism, and the microorganism is transformed, and the recombinant strain of the microorganism capable of secreting and expressing the ornithine decarboxylase gene is obtained by screening.
进一步地,所述鸟氨酸脱羧酶基因可以来源于大肠杆菌、乳酸菌(Lactobacillus)、粗球孢子菌(Coccidioidesimmits)、摩氏摩根菌(Morganellamorganii)等微生物;也可以来源于曼陀罗(DaturaStramonium)、朝鲜蓟(Cynarascolymus)、冰叶日中花(Mesembryanthemumcrystallinum)、兰花(Cymbidium)、白杨(poplar)等高等植物;更优选的是来源于大肠杆菌的speC基因。Further, the ornithine decarboxylase gene can be derived from microorganisms such as Escherichia coli, lactic acid bacteria (Lactobacillus), coccidioides immits (Coccidioidesimmits), Morganella morganii (Morganellamorganii) and the like; it can also be derived from Datura Stramonium , artichoke (Cynarascolymus), ice leaf sunflower (Mesembryanthemum crystallinum), orchid (Cymbidium), poplar (poplar) and other higher plants; more preferably the speC gene derived from Escherichia coli.
实施例2Example 2
一种通过微生物转化合成丁二胺的方法,具体步骤如下:A method for synthesizing butanediamine through microbial conversion, the specific steps are as follows:
(1)产丁二胺工程菌株PUT-C1的构建(1) Construction of butanediamine-producing engineering strain PUT-C1
将鸟氨酸脱羧酶基因连接于表达质粒pET22b+上构建质粒pET22b-speC,转化入E.coliBL21(DE3)中构建成工程菌株E.coli BL21(DE3)/pET22b-speC。The ornithine decarboxylase gene was connected to the expression plasmid pET22b+ to construct the plasmid pET22b-speC, which was transformed into E.coliBL21(DE3) to construct the engineering strain E.coli BL21(DE3)/pET22b-speC.
具体地,利用试剂盒提取大肠杆菌的基因组DNA,作为扩增鸟氨酸脱羧酶基因speC的模板,如图1;根据NCBI提供的大肠杆菌鸟氨酸脱羧酶基因speC序列设计引物,分别扩增出speC,如图2;然后speC片段通过EcoRI和Nco I酶切后克隆至pET22b+相同酶切位点之间,得质粒pET22b-speC,如图3;转化大肠杆菌E.coli BL21(DE3),经过筛选,获得产丁二胺大肠杆菌重组菌PUT-C1。Specifically, use the kit to extract the genomic DNA of Escherichia coli as a template for amplifying the ornithine decarboxylase gene speC, as shown in Figure 1; design primers according to the sequence of the Escherichia coli ornithine decarboxylase gene speC provided by NCBI, and amplify the speC, as shown in Figure 2; then the speC fragment was digested by EcoRI and Nco I and cloned into pET22b+ between the same restriction sites to obtain the plasmid pET22b-speC, as shown in Figure 3; transformed into Escherichia coli E.coli BL21(DE3), After screening, the butanediamine-producing Escherichia coli recombinant strain PUT-C1 was obtained.
构建重组菌PUT-C1所设计的引物序列如表1:The primer sequences designed to construct the recombinant strain PUT-C1 are shown in Table 1:
表1:构建重组菌PUT-C1所需引物Table 1: Primers required for the construction of recombinant bacteria PUT-C1
(2)鸟氨酸脱羧酶SpeC的酶活测定(2) Determination of the enzyme activity of ornithine decarboxylase SpeC
测定鸟氨酸脱羧酶SpeC的活性方法步骤如下:The method steps for measuring the activity of ornithine decarboxylase SpeC are as follows:
1、粗酶液的制备1. Preparation of crude enzyme solution
1)从平板上取一环重组菌株接种于相应抗性的50mL液体LB中,在37℃、200r/min摇床上过夜培养12h。1) Take a loop of the recombinant strain from the plate and inoculate it into 50 mL of liquid LB with corresponding resistance, and culture it overnight at 37° C. on a shaker at 200 r/min for 12 hours.
2)按1%接种量转接入新的LB液体培养基中,在37℃、200rpm的条件下在摇床上培养。2) Transfer 1% of the inoculum into new LB liquid medium, and culture on a shaker at 37° C. and 200 rpm.
3)当OD600=1.0时,加入终浓度1mM IPTG,然后在37℃,200r/min的条件下诱导6h。3) When OD 600 =1.0, add a final concentration of 1 mM IPTG, and then induce at 37° C. and 200 r/min for 6 h.
4)取30mL培养液于50mL离心管中,6000r/min离心8min。4) Take 30mL culture solution in a 50mL centrifuge tube and centrifuge at 6000r/min for 8min.
5)弃上清,加入10mL无菌磷酸盐缓冲溶液(PBS),涡旋振荡混匀,补加PBS至20mL,6000r/min离心8min。重复步骤一次5) Discard the supernatant, add 10 mL of sterile phosphate buffered saline (PBS), vortex to mix, add PBS to 20 mL, and centrifuge at 6000 r/min for 8 min. repeat step once
6)加入10mL PBS,细胞悬液超声处理30min,超声2s,间歇3s,功率40%。6) Add 10 mL of PBS, sonicate the cell suspension for 30 min, 2 s, 3 s intermittent, 40% power.
7)4℃低温下8000r/min离心15min,除去细胞碎片上清即为粗酶液。7) Centrifuge at 8000r/min for 15min at low temperature at 4°C, remove the supernatant of cell debris and obtain the crude enzyme solution.
2、鸟氨酸脱羧酶SpeC的SDS-PAGE分析2. SDS-PAGE analysis of ornithine decarboxylase SpeC
将待用的凝胶浸泡在缓冲液中,用微量进样器按号向凝胶孔中加样。接上电泳仪,打开电源,调节电流至20-30mA,保持恒流,待样品迁移至分离胶下端1cm处时,关闭电源。电泳完毕后,取下电泳凝胶,并在凝胶的一角小心切去一小块作为标记,倒入考马斯亮蓝染色液进行染色,约1h。倾倒出染色液,将凝胶在水中漂洗数次。加入脱色液,开始每隔2h更换脱色液一次,直至凝胶背景清晰。Soak the gel to be used in the buffer solution, and add samples to the gel holes according to the number with a micro-sampler. Connect the electrophoresis instrument, turn on the power, adjust the current to 20-30mA, keep a constant current, and turn off the power when the sample migrates to the bottom 1cm of the separation gel. After the electrophoresis is completed, remove the electrophoresis gel, carefully cut off a small piece at the corner of the gel as a marker, and pour into Coomassie brilliant blue staining solution for staining, about 1h. Pour off the staining solution and rinse the gel several times in water. Add the destaining solution and start to replace the destaining solution every 2 hours until the background of the gel is clear.
PUT-C1进行诱导表达及SDS-PAGE分析,电泳结果如图4。鸟氨酸脱羧酶的分子量大小均为80kD左右。PUT-C1 was induced to express and analyzed by SDS-PAGE. The electrophoresis results are shown in Figure 4. The molecular weight of ornithine decarboxylase is about 80kD.
3、酶活测定3. Determination of enzyme activity
1)取800μL不同pH的磷酸缓冲液于5mL无菌具塞刻度管中,至于37℃水浴预热5min。平行3个。1) Take 800 μL of phosphate buffer solution with different pH in a 5 mL sterile stoppered graduated tube, and preheat it in a 37°C water bath for 5 minutes. 3 in parallel.
2)加入100μL粗酶液,加入L-精氨酸母液100μL,开始计时30min。对照组用无菌水替代L-精氨酸。2) Add 100 μL of crude enzyme solution, add 100 μL of L-arginine mother solution, and start timing for 30 minutes. In the control group, sterile water was used instead of L-arginine.
3)将具塞刻度管置于冰上,迅速加入500μL 2MNaOH终止反应。3) Place the stoppered graduated tube on ice, and quickly add 500 μL of 2M NaOH to stop the reaction.
4)衍生,上柱检测丁二胺的生成量。4) Derivatization, put on the column to detect the generation amount of butanediamine.
4、鸟氨酸脱羧酶活性检测结果4. Detection results of ornithine decarboxylase activity
根据HPLC检测丁二胺转化结果,鸟氨酸脱羧酶SpeC的活性为17.48U/mL。According to the results of HPLC detection of the conversion of butanediamine, the activity of ornithine decarboxylase SpeC was 17.48 U/mL.
(3)重组菌株PUT-C1的摇瓶发酵及丁胺产量的测定(3) Determination of shake flask fermentation and butylamine output of recombinant strain PUT-C1
1、摇瓶发酵1. Shake flask fermentation
在平板上挑取一环单克隆重组菌株接种到含有5mL LB培养基中培养10-12h,以1%的接种量接入到装有50mL LB培养基的250mL三角瓶中,37℃,200r/min培养至OD600=1.0,加入终浓度1mM IPTG,然后在37℃,200r/min的条件下诱导6h。投入底物鸟氨酸,其中鸟氨酸的浓度分别为0g/L、10g/L、20g/L、30g/L和40g/L,每组平行三个。37℃,200r/min培养12h。发酵液12000r/min离心5min,取上清液4℃保存。Pick a ring of monoclonal recombinant strains on the plate and inoculate them into 5mL LB medium for 10-12h, and insert 1% of the inoculum into a 250mL Erlenmeyer flask containing 50mL LB medium, at 37°C, 200r/h Min culture to OD 600 =1.0, add final concentration of 1mM IPTG, and then induce at 37°C, 200r/min for 6h. Put in the substrate ornithine, wherein the concentrations of ornithine are 0g/L, 10g/L, 20g/L, 30g/L and 40g/L, respectively, and each group has three parallels. Cultivate at 37°C, 200r/min for 12h. The fermentation broth was centrifuged at 12000r/min for 5min, and the supernatant was taken and stored at 4°C.
2、HPLC检测丁二胺2. HPLC detection of butanediamine
实验采用国标法检测丁二胺的含量,通过对水样进行柱前衍生,水样经苯甲酰氯衍生化后用乙醚萃取,萃取物经溶剂转换溶于甲醇后用高效液相色谱(HPLC)紫外检测。此法灵敏度高,丁二胺在2-40mg/L范围内呈线性关系。In the experiment, the national standard method was used to detect the content of butanediamine. By derivatizing the water sample before the column, the water sample was derivatized with benzoyl chloride and then extracted with ether. UV detection. This method has high sensitivity, butanediamine has a linear relationship in the range of 2-40mg/L.
1)样品的衍生和萃取1) Derivatization and extraction of samples
取1mL上清液加入5mL具塞刻度试管中,加入500μL 2mol/LNaOH溶液、10μL苯甲酰氯,37℃水浴振摇20min,隔5min旋涡振荡30s,加入0.5g NaCl、1mL乙醚振荡30s静置分层。把上层乙醚取至另一离心管中,待乙醚挥发完全,加入500μL甲醇溶解,过膜后作为HPLC检测用样。标准溶液的衍生和萃取步骤同样品处理步骤。Take 1 mL of the supernatant and add it to a 5 mL graduated test tube with a stopper, add 500 μL of 2mol/L NaOH solution and 10 μL of benzoyl chloride, shake in a water bath at 37°C for 20 min, vortex for 30 s every 5 min, add 0.5 g of NaCl, 1 mL of diethyl ether and shake for 30 s to separate layer. Take the ether in the upper layer into another centrifuge tube, wait for the ether to volatilize completely, add 500 μL of methanol to dissolve, pass through the membrane and use it as a sample for HPLC detection. The derivation and extraction steps of the standard solution are the same as the sample processing steps.
2)HPLC测定2) HPLC determination
a色谱条件a Chromatographic conditions
A)色谱柱:C18色谱柱,5μm,4.6×250mm,或性能相当者。A) Chromatographic column: C18 chromatographic column, 5μm, 4.6×250mm, or those with equivalent performance.
B)柱温:室温。B) Column temperature: room temperature.
C)流动相:A(乙腈),B(0.02mol/L乙酸铵),梯度洗脱条件见表2。C) mobile phase: A (acetonitrile), B (0.02mol/L ammonium acetate), gradient elution conditions are shown in Table 2.
D)检测波长:254nm。D) Detection wavelength: 254nm.
E)进样量:10μL。E) Injection volume: 10 μL.
F)流速:1mL/minF) Flow rate: 1mL/min
b液相色谱分析测定b Liquid chromatography analysis and determination
开机,预热,使用流动相冲洗色谱柱,基线稳定30min后开始进样Turn on the machine, preheat it, rinse the column with mobile phase, and start sampling after the baseline is stable for 30 minutes
表2梯度洗脱条件Table 2 gradient elution conditions
将发酵液上清稀释一定倍数后衍生进行HPLC分析,标准品和样品液相色谱图分别为图5和图6,丁二胺衍生物在约6.8min时出峰。根据图7标准曲线,通过峰面积计算出丁二胺的含量。After diluting the supernatant of the fermentation broth by a certain number of times, it was derivatized for HPLC analysis. The liquid chromatograms of the standard and sample were shown in Figure 5 and Figure 6, respectively, and the butanediamine derivative peaked at about 6.8 minutes. According to the standard curve in Figure 7, the content of butanediamine was calculated by the peak area.
采用外标法生成峰面积(y)-丁二胺盐酸盐样品浓度(x)的标准曲线及其线性回归方程。从图4可以得出,采用外标法生成峰面积(y)-丁二胺盐酸盐样品浓度(x)的标准曲线及其线性回归方程。The standard curve and its linear regression equation of peak area (y)-butanediamine hydrochloride sample concentration (x) were generated by external standard method. Can draw from Fig. 4, adopt external standard method to generate the standard curve and its linear regression equation of peak area (y)-butanediamine hydrochloride sample concentration (x).
y=16.342x+5.34式(1)y=16.342x+5.34 formula (1)
其中,y为峰面积,x为丁二胺盐酸盐浓度,方程线性回归相关系数(Rs)为0.999。Wherein, y is the peak area, x is the butanediamine hydrochloride concentration, and the equation linear regression correlation coefficient (Rs) is 0.999.
根据标准曲线测定不同样品中的丁二胺的含量。每个样品做三个重复,求丁二胺产量的平均值。结果如图8所示。从图8可以看出,未投入鸟氨酸的发酵液中丁二胺产量为0;当投入鸟氨酸的浓度为10g/L时,丁二胺产量为500±17mg/L;当投入鸟氨酸的浓度为20g/L时,丁二胺产量为1690±64mg/L;当投入鸟氨酸的浓度为30g/L时,丁二胺产量为1240±27mg/L;当投入鸟氨酸的浓度为40g/L时,丁二胺产量为696±8mg/L。说明在底物浓度为20g/L时,发酵液中丁二胺积累量最大,表达鸟氨酸脱羧酶转化鸟氨酸为丁二胺可以有效提高丁二胺的产量。The content of butanediamine in different samples was determined according to the standard curve. Each sample was repeated three times, and the average value of butanediamine production was obtained. The result is shown in Figure 8. As can be seen from Figure 8, the output of butanediamine in the fermentation broth without ornithine input is 0; when the concentration of input ornithine is 10g/L, the output of butanediamine is 500±17mg/L; When the concentration of ornithine is 20g/L, the output of butanediamine is 1690±64mg/L; when the concentration of input ornithine is 30g/L, the output of butanediamine is 1240±27mg/L; When the concentration is 40g/L, the output of butanediamine is 696±8mg/L. It shows that when the substrate concentration is 20g/L, the accumulation of butanediamine in the fermentation broth is the largest, and the expression of ornithine decarboxylase to convert ornithine into butanediamine can effectively increase the production of butanediamine.
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