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CN104561279B - Method of improving quality of chicken semen, primer used for method, kit and using method of kit - Google Patents

Method of improving quality of chicken semen, primer used for method, kit and using method of kit Download PDF

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CN104561279B
CN104561279B CN201410803978.1A CN201410803978A CN104561279B CN 104561279 B CN104561279 B CN 104561279B CN 201410803978 A CN201410803978 A CN 201410803978A CN 104561279 B CN104561279 B CN 104561279B
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赵振华
黎寿丰
张晶鑫
黄华云
李春苗
王钱保
吴兆林
陈连颐
梁忠
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Yangzhou Xianglong Poultry Development Co ltd
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Abstract

一种鸡精液品质密切相关基因用引物,包括血管活性肠肽受体1(VIPR1)基因PCR扩增的上下游引物混合物、血管活性肠肽受体2(VIPR2)基因PCR扩增的上下游引物混合物、多巴胺受体2(DAR2)基因PCR扩增的上下游引物混合物。提高鸡精液品质的方法:在育种筛选时,提取待测样本的鸡基因组DNA,基因序列经特异性引物扩增得到192、250和270 bp的目的片段,目的片段经SSCP分析,凝胶电泳后用银染显色,得到DNA的SSCP图谱,根据3个图谱中的带型选择选择TT/GG/OQ三基因复合基因型的个体。试剂盒包括VIPR1、VIP2和DAR2基因PCR扩增的上下游引物混合物,PCR所需试剂。试剂盒使用方法:PCR扩增SNP位点所在片段;PCR‑SSCP检测;SSCP分析。本发明方法效果显著,检测方法简单快捷,且不受外界环境的影响。

A primer for genes closely related to chicken semen quality, including a mixture of upstream and downstream primers for PCR amplification of vasoactive intestinal peptide receptor 1 (VIPR1) gene, and upstream and downstream primers for PCR amplification of vasoactive intestinal peptide receptor 2 (VIPR2) gene Mixture, upstream and downstream primer mix for PCR amplification of the dopamine receptor 2 (DAR2) gene. The method to improve the quality of chicken semen: During breeding and screening, extract the chicken genomic DNA of the sample to be tested, and amplify the gene sequence with specific primers to obtain target fragments of 192, 250 and 270 bp. The target fragments are analyzed by SSCP and gel electrophoresis. The SSCP map of DNA was obtained by silver staining, and the individuals with TT/GG/OQ three-gene composite genotype were selected according to the band patterns in the three maps. The kit includes upstream and downstream primer mixtures for PCR amplification of VIPR1, VIP2 and DAR2 genes, and reagents required for PCR. Kit usage method: PCR amplification of the fragment where the SNP site is located; PCR‑SSCP detection; SSCP analysis. The method of the invention has remarkable effect, and the detection method is simple and quick, and is not affected by the external environment.

Description

提高鸡精液品质方法及其引物、试剂盒及其使用方法Method for improving quality of chicken semen, primers, kit and method of use thereof

技术领域technical field

本发明涉及优质鸡精液品质密切相关基因诊断试剂盒及其使用方法,属于分子生物学技术领域,应用于公鸡的早期筛选。The invention relates to a high-quality chicken semen quality closely related gene diagnosis kit and a use method thereof, which belong to the technical field of molecular biology and are applied to the early screening of roosters.

背景技术Background technique

人类对家禽生产性状从无意识到有意识选择已经历几千年的历史,而从表型选择到遗传基础的研究和基因型选择这一过程仅是近几十年的事情。优秀的种公鸡是提高经济效益的关键之一,一方面可降低生产成本,特别是种鸡的饲养成本。采取人工授精可使鸡的配种比例提高3倍左右,可以减少3/4的种公鸡,这可以较大的降低成本,另一方面可大大提高优秀种公鸡的利用率,提高生产效率和产品品质。当前对公鸡的选择依然采用常规选择,虽然常规育种方法在家禽遗传改良中取得一定进展,但它对数量性状的选择要在个体生长发育到一定时期,育种周期长,费用高。优质鸡精液品质性状为数量性状,仅以个体或亲属表型值进行个体选择结果不十分可靠,因此,需要遗传标记进行辅助选择。随着人类基因组测序工作的完成,SNP的筛选及检测正式成为研究者广泛关注的焦点。该技术具有特异性高、检测快速、通用性强、适用范围广、成本低廉等特点,在复杂疾病的基因定位、关联分析、个体疾病易感性分析与药物基因组学等的研究中发挥着越来越重要的作用。Human beings have experienced thousands of years of unconscious and conscious selection of poultry production traits, but the process from phenotypic selection to genetic basis research and genotype selection is only a matter of recent decades. Excellent breeding roosters are one of the keys to improving economic benefits. On the one hand, they can reduce production costs, especially the breeding costs of breeding chickens. Adopting artificial insemination can increase the breeding ratio of chickens by about 3 times, and reduce 3/4 of the breeding cocks, which can greatly reduce the cost. On the other hand, it can greatly increase the utilization rate of excellent breeding cocks, improve production efficiency and product quality . The current selection of roosters still adopts conventional selection. Although conventional breeding methods have made some progress in the genetic improvement of poultry, the selection of quantitative traits requires a certain period of individual growth and development. The breeding cycle is long and the cost is high. The semen quality traits of high-quality chickens are quantitative traits, and the results of individual selection based on the phenotype values of individuals or relatives are not very reliable. Therefore, genetic markers are needed for assisted selection. With the completion of human genome sequencing, the screening and detection of SNP has officially become the focus of extensive attention of researchers. This technology has the characteristics of high specificity, rapid detection, strong versatility, wide application range, and low cost. more important role.

经过对现有国内外文献和专利的检索,至今未见有VIPR1、VIPR2和DAR2基因多态性位点与鸡精液品质性状相关性的报道。After searching the existing domestic and foreign literature and patents, there has been no report on the correlation between VIPR1, VIPR2 and DAR2 gene polymorphism sites and chicken semen quality traits.

发明内容Contents of the invention

本发明的目的是提供一种提高鸡精液品质方法及其引物、试剂盒及其使用方法,本发明方法效果显著,检测方法简单快捷,且不受外界环境的影响。The object of the present invention is to provide a method for improving the quality of chicken semen, primers, a kit and a method of use thereof. The method of the present invention has remarkable effects, and the detection method is simple and quick, and is not affected by the external environment.

本发明提供了一种鸡精液品质密切相关基因用引物,包括血管活性肠肽受体1(VIPR1)基因PCR扩增的上下游引物混合物、血管活性肠肽受体2(VIPR2)基因PCR扩增的上下游引物混合物、多巴胺受体2(DAR2)基因PCR扩增的上下游引物混合物;The invention provides a primer for genes closely related to chicken semen quality, including a mixture of upstream and downstream primers for the PCR amplification of the vasoactive intestinal peptide receptor 1 (VIPR1) gene, and a PCR amplification of the vasoactive intestinal peptide receptor 2 (VIPR2) gene. The upstream and downstream primer mixtures, the upstream and downstream primer mixtures of dopamine receptor 2 (DAR2) gene PCR amplification;

所述血管活性肠肽受体1(VIPR1)基因PCR扩增的上下游引物混合物中上游引物序列:5’-gctcccgcagatatatggaa-3’;下游引物序列:5’-tgggaggagacaaaacaaca-3’;The upstream primer sequence in the upstream and downstream primer mixture of the vasoactive intestinal peptide receptor 1 (VIPR1) gene PCR amplification: 5'-gctcccgcagatatatggaa-3'; the downstream primer sequence: 5'-tgggaggagacaaaacaaca-3';

所述血管活性肠肽受体2(VIPR2)基因PCR扩增的上下游引物混合物的上游引物序列:5’-gtgttcacttttgggcacct-3’;下游引物序列:R:5’-cagccaaaaacattggtgtg-3’;The upstream primer sequence of the upstream and downstream primer mixture of the vasoactive intestinal peptide receptor 2 (VIPR2) gene PCR amplification: 5'-gtgttcacttttgggcacct-3'; the downstream primer sequence: R:5'-cagccaaaaacattggtgtg-3';

所述多巴胺受体2(DAR2)基因PCR扩增的上下游引物混合物,上游引物序列:5’-gttggggagtggaggttcag-3’;下游引物序列:5’-attgggctggagatggcaaa-3’。The upstream and downstream primer mixture for PCR amplification of the dopamine receptor 2 (DAR2) gene, the upstream primer sequence: 5'-gttggggagtggaggttcag-3'; the downstream primer sequence: 5'-attgggctggagatggcaaa-3'.

本发明还提供了一种利用复合基因型提高鸡精液品质的方法,提取待测样本的鸡基因组DNA,待测样本的鸡基因组DNA基因序列经权利要求1所述的鸡精液品质密切相关基因用引物进行PCR扩增SNP位点所在片段,扩增得到192、250和270 bp的目的片段,目的片段先进行PCR-SSCP检测后,凝胶电泳后用银染显色,分别得到DNA的SSCP图谱,根据3个图谱中的带型选择选择TT/GG/OQ三基因复合基因型的个体,即在73352、36127、201和208处分别为T、G、T和A/G等位基因的个体。The present invention also provides a method for improving the quality of chicken semen by using compound genotypes. The chicken genome DNA of the sample to be tested is extracted. The primers were used to amplify the fragment where the SNP site is located, and the target fragments of 192, 250 and 270 bp were amplified. The target fragments were first detected by PCR-SSCP, and then stained with silver staining after gel electrophoresis to obtain the SSCP maps of the DNA respectively. , select individuals with TT/GG/OQ trigene compound genotype according to band pattern selection in the 3 maps, that is, individuals with T, G, T and A/G alleles at 73352, 36127, 201 and 208, respectively .

优选地,所述PCR扩增SNP位点所在片段的反应体系20μL:在PCR反应管中加入上下游引物混合物2.0μL、PCR反应试剂3μL、50ng/μL DNA模板1.0μL,加超纯水至20μL,充分混匀后短暂离心。Preferably, 20 μL of the reaction system for PCR amplifying the fragment where the SNP site is located: add 2.0 μL of upstream and downstream primer mixture, 3 μL of PCR reaction reagent, 1.0 μL of 50 ng/μL DNA template into the PCR reaction tube, add ultrapure water to 20 μL , mix well and centrifuge briefly.

优选地,所述PCR扩增的反应条件为先94℃变性5min;再经过35个循环,每个循环包括94℃30s、60℃15s、72℃30s;然后72℃延伸10min、最后4℃保存。Preferably, the reaction conditions of the PCR amplification are first denaturation at 94°C for 5 minutes; then 35 cycles, each cycle including 94°C for 30s, 60°C for 15s, and 72°C for 30s; then extending at 72°C for 10 minutes, and finally storing at 4°C .

优选地,所述PCR-SSCP检测包括:2μL PCR扩增产物加入7μL上样缓冲液,98℃变性10min,然后冰浴5min;3对引物的聚丙烯酰胺凝胶浓度为10%,凝胶交联度为29:1,电压都为150V,过夜电泳。Preferably, the PCR-SSCP detection includes: adding 2 μL of PCR amplification products to 7 μL of loading buffer, denaturing at 98° C. for 10 minutes, and then ice-bathing for 5 minutes; the polyacrylamide gel concentration of 3 pairs of primers is 10%, and the gel cross The coupling ratio was 29:1, the voltage was 150V, and electrophoresis was performed overnight.

此外,本发明又提供了一种鸡精液品质三基因联合效应诊断试剂盒,包括盒体和盒体内的衬垫,衬垫的孔腔内设有所述的血管活性肠肽受体1 VIPR1基因PCR扩增的上下游引物混合物P、血管活性肠肽受体2 VIPR2基因PCR扩增的上下游引物混合物P、所述多巴胺受体2 DAR2基因PCR扩增的上下游引物混合物P以及PCR反应试剂、超纯水、上样缓冲液;所述PCR反应试剂为10×buffer、dNTP和Taq酶的混合物。In addition, the present invention also provides a chicken semen quality three-gene combined effect diagnostic kit, which includes a box body and a liner in the box body, and the vasoactive intestinal peptide receptor 1 VIPR1 gene is provided in the cavity of the liner The upstream and downstream primer mixture P for PCR amplification, the upstream and downstream primer mixture P for the PCR amplification of the vasoactive intestinal peptide receptor 2 VIPR2 gene, the upstream and downstream primer mixture P for the PCR amplification of the dopamine receptor 2 DAR2 gene, and PCR reaction reagents , ultrapure water, loading buffer; the PCR reaction reagent is a mixture of 10×buffer, dNTP and Taq enzyme.

本发明进一步提供了鸡精液品质三基因联合效应诊断试剂盒的使用方法,包括以下步骤:The present invention further provides a method for using the chicken semen quality three-gene combined effect diagnostic kit, comprising the following steps:

(1)PCR扩增SNP位点所在片段:采用20μL反应体系:在PCR反应管中加入上下游引物混合物2.0μL、PCR反应试剂3μL、50ng/μL DNA模板1.0μL,加超纯水至20μL,充分混匀后短暂离心;(1) PCR amplification of the fragment where the SNP site is located: use a 20 μL reaction system: add 2.0 μL of upstream and downstream primer mixture, 3 μL of PCR reaction reagent, 1.0 μL of 50 ng/μL DNA template, and add ultrapure water to 20 μL in a PCR reaction tube. Centrifuge briefly after thorough mixing;

(2)将PCR反应管放入PCR仪进行反应扩增:先94℃变性5min;再经过35个循环,每个循环包括94℃30s、60℃15s、72℃30s;然后72℃延伸10min、最后4℃保存。(2) Put the PCR reaction tube into the PCR instrument for reaction amplification: first denature at 94°C for 5 minutes; then go through 35 cycles, each cycle including 94°C for 30s, 60°C for 15s, and 72°C for 30s; then extend at 72°C for 10 minutes, Finally, store at 4°C.

(3)PCR-SSCP检测:2μL PCR扩增产物加入7μL上样缓冲液,98℃变性10min,然后冰浴5min。3对引物的聚丙烯酰胺凝胶浓度为10%,凝胶交联度为29:1,电压都为150V,过夜电泳;(3) PCR-SSCP detection: 2 μL of PCR amplification product was added to 7 μL of loading buffer, denatured at 98° C. for 10 min, and then kept on ice for 5 min. The polyacrylamide gel concentration of the 3 pairs of primers is 10%, the gel cross-linking degree is 29:1, the voltage is 150V, and electrophoresis is carried out overnight;

(4)目的片段经SSCP分析,凝胶电泳后用银染显色,得到DNA的SSCP图谱,根据3个图谱中的带型选择VIPR1、VIPR2和DAR2基因的基因型分别为TT/GG/OQ三基因复合基因型的个体,即在73352、36127、201和208处分别为T、G、T和A/G等位基因的个体。(4) The target fragment was analyzed by SSCP, and after gel electrophoresis, it was developed by silver staining to obtain the SSCP map of the DNA. According to the band patterns in the three maps, the genotypes of VIPR1, VIPR2 and DAR2 were selected as TT/GG/OQ Individuals with a trigene compound genotype, ie individuals with T, G, T and A/G alleles at 73352, 36127, 201 and 208, respectively.

与现有技术相比,本发明具有以下有益效果:Compared with the prior art, the present invention has the following beneficial effects:

第一,针对VIPR1、VIPR2和DAR2基因分别设计1对引物,VIPR1引物的扩增产物经SSCP分析产生3种基因型(CC、CT和TT),直接测序表明TT型与CC型相比在73352 bp处发生了C→T突变;VIPR2引物的扩增产物经SSCP分析产生3种基因型(AA、AG和GG),GG型与AA型在36127 bp处发生了A→G突变;DAR2引物的扩增产物经SSCP分析产生5种基因型(OO、OP、OQ、PP和PQ),QQ型与OO型相比检测到在201处发生C→T突变,PP型和OO型相比发现208处A→G突变。3个基因不同复合基因型与优质肉鸡鸡冠及精液品质的相关分析表明,三个基因复合基因型TT/GG/OQ基因型组合的精液品质最好,精液量显著高于TT/AA/PP、CC/AA/OO、CC/AA/OP和CT/AA/OO型个体(P<0.05);精子密度显著高于CT/AA/PP、CC/GG/OP、CC/AA/OO、CC/GG/OO和CT/AA/OO型个体(P<0.05);精子活力显著好于CT/AA/OO和CC/AA/OP型个体(P<0.05);First, a pair of primers were designed for VIPR1, VIPR2 and DAR2 genes respectively. The amplified products of VIPR1 primers were analyzed by SSCP to generate three genotypes (CC, CT and TT). A C→T mutation occurred at bp; the amplified product of VIPR2 primer was analyzed by SSCP to produce three genotypes (AA, AG and GG), GG type and AA type had A→G mutation at 36127 bp; DAR2 primer The amplified product was analyzed by SSCP to produce 5 genotypes (OO, OP, OQ, PP and PQ). Compared with the OO type, the C→T mutation was detected at 201 in the QQ type, and 208 in the PP type compared with the OO type. A → G mutation. The correlation analysis of the different compound genotypes of the three genes and the high-quality broiler comb and semen quality showed that the combination of the three gene compound genotypes TT/GG/OQ genotypes had the best semen quality, and the semen volume was significantly higher than that of TT/AA/PP, CC/AA/OO, CC/AA/OP and CT/AA/OO individuals (P<0.05); sperm density was significantly higher than that of CT/AA/PP, CC/GG/OP, CC/AA/OO, CC/ GG/OO and CT/AA/OO type individuals (P<0.05); sperm motility was significantly better than CT/AA/OO and CC/AA/OP type individuals (P<0.05);

第二,本发明利用血管活性肠肽受体1(VIPR1)、血管活性肠肽受体2(VIPR2)和多巴胺受体2(DAR2)基因的复合基因型的检测提供一种准确性高、快速、价格低廉的基因分型试剂盒。本发明试剂盒包括VIPR1、VIP2和DAR2基因PCR扩增的上下游引物混合物,PCR所需试剂。在育种筛选时,提取待测样本的鸡基因组DNA,基因序列经特异性引物扩增得到192、250和270 bp的目的片段,目的片段经SSCP分析,凝胶电泳后用银染显色,得到DNA的SSCP图谱,根据3个图谱中的带型选择选择TT/GG/OQ三基因复合基因型的个体。本发明方法效果显著,检测方法简单快捷,且不受外界环境的影响。Second, the present invention provides a high-accuracy, rapid , Inexpensive genotyping kits. The kit of the invention comprises the upstream and downstream primer mixtures for PCR amplification of VIPR1, VIP2 and DAR2 genes, and reagents required for PCR. During breeding and screening, the chicken genome DNA of the sample to be tested was extracted, and the gene sequence was amplified by specific primers to obtain the target fragments of 192, 250 and 270 bp. The target fragments were analyzed by SSCP and developed by silver staining after gel electrophoresis. The SSCP map of DNA, according to the band pattern selection in the three maps, select individuals with TT/GG/OQ three-gene compound genotype. The method of the invention has remarkable effect, and the detection method is simple and quick, and is not affected by the external environment.

附图说明Description of drawings

图1是VIPR1基因的SSCP图谱;图中1,2:CC型;3,4:CT型;5,6:TT型。Figure 1 is the SSCP map of the VIPR1 gene; in the figure 1, 2: CC type; 3, 4: CT type; 5, 6: TT type.

图2是VIPR1基因的测序图。Figure 2 is a sequence diagram of the VIPR1 gene.

图3是VIPR2基因的SSCP图谱;图中2,3,5:AA型;4,6:GG型;1:AG型。Figure 3 is the SSCP map of the VIPR2 gene; in the figure 2, 3, 5: AA type; 4, 6: GG type; 1: AG type.

图4是VIPR-2基因的测序图;Figure 4 is a sequence diagram of the VIPR-2 gene;

图5是DAR2基因的SSCP图谱;图中1:QQ型;2:PP型;3:PQ型;4,5:OQ型;6,8:OP型;7:OO型。Figure 5 is the SSCP map of the DAR2 gene; in the figure 1: QQ type; 2: PP type; 3: PQ type; 4, 5: OQ type; 6, 8: OP type; 7: OO type.

图6是DAR2基因的测序图。Figure 6 is a sequence diagram of the DAR2 gene.

具体实施方式detailed description

一种鸡精液品质密切相关基因用引物,包括血管活性肠肽受体1VIPR1基因PCR扩增的上下游引物混合物、血管活性肠肽受体2VIPR2基因PCR扩增的上下游引物混合物、多巴胺受体2 DAR2基因PCR扩增的上下游引物混合物。A primer for genes closely related to chicken semen quality, including a mixture of upstream and downstream primers for PCR amplification of vasoactive intestinal peptide receptor 1 VIPR1 gene, a mixture of upstream and downstream primers for PCR amplification of vasoactive intestinal peptide receptor 2 VIPR2 gene, and dopamine receptor 2 DAR2 gene PCR amplification upstream and downstream primer mix.

血管活性肠肽受体1VIPR1基因PCR扩增的上下游引物混合物中上游引物序列:5’-gctcccgcagatatatggaa-3’;下游引物序列:5’-tgggaggagacaaaacaaca-3’。In the upstream and downstream primer mixture for PCR amplification of vasoactive intestinal peptide receptor 1 VIPR1 gene, the upstream primer sequence: 5'-gctcccgcagatatatggaa-3'; the downstream primer sequence: 5'-tgggaggagacaaaacaaca-3'.

血管活性肠肽受体2VIPR2基因PCR扩增的上下游引物混合物的上游引物序列:5’-gtgttcacttttgggcacct-3’;下游引物序列:R:5’-cagccaaaaacattggtgtg-3’。The upstream primer sequence of the upstream and downstream primer mixture for PCR amplification of vasoactive intestinal peptide receptor 2 VIPR2 gene: 5'-gtgttcacttttgggcacct-3'; the downstream primer sequence: R: 5'-cagccaaaaacattggtgtg-3'.

多巴胺受体2 DAR2基因PCR扩增的上下游引物混合物,上游引物序列:5’-gttggggagtggaggttcag-3’;下游引物序列:5’-attgggctggagatggcaaa-3’。A mixture of upstream and downstream primers for PCR amplification of the dopamine receptor 2 DAR2 gene. The upstream primer sequence: 5'-gttggggagtggaggttcag-3'; the downstream primer sequence: 5'-attgggctggagatggcaaa-3'.

利用复合基因型提高鸡精液品质的方法:提取待测样本的鸡基因组DNA,待测样本的鸡基因组DNA基因序列经权利要求1所述的鸡精液品质密切相关基因用引物进行PCR扩增SNP位点所在片段,扩增得到192、250和270 bp的目的片段,目的片段进行PCR-SSCP检测后,凝胶电泳后用银染显色,分别得到DNA的SSCP图谱,根据3个图谱中的带型选择选择TT/GG/OQ三基因复合基因型的个体,即在73352、36127、201和208处分别为T、G、T和A/G等位基因的个体。The method for improving the quality of chicken semen by using compound genotypes: extract the chicken genome DNA of the sample to be tested, and the chicken genome DNA gene sequence of the sample to be tested is subjected to PCR amplification of the SNP position with primers for genes closely related to the quality of chicken semen described in claim 1 Click on the fragments, and amplify the target fragments of 192, 250 and 270 bp. After the target fragments are detected by PCR-SSCP, after gel electrophoresis, they are developed by silver staining, and the SSCP maps of DNA are obtained respectively. According to the bands in the three maps Type selection selects individuals with TT/GG/OQ trigene compound genotype, that is, individuals with T, G, T and A/G alleles at 73352, 36127, 201 and 208, respectively.

PCR扩增SNP位点所在片段的反应体系20μL:在PCR反应管中加入上下游引物混合物2.0μL(每个上下游引物混合物对应一个PCR反应管)、PCR反应试剂3μL、50ng/μL DNA模板1.0μL,加超纯水至20μL,充分混匀后短暂离心。20 μL reaction system for PCR amplifying the fragment where the SNP site is located: add 2.0 μL of upstream and downstream primer mixtures to the PCR reaction tube (each upstream and downstream primer mixture corresponds to a PCR reaction tube), 3 μL of PCR reaction reagent, 50 ng/μL DNA template 1.0 μL, add ultrapure water to 20 μL, mix thoroughly and centrifuge briefly.

PCR扩增的反应条件为先94℃变性5min;再经过35个循环,每个循环包括94℃30s、60℃15s、72℃30s;然后72℃延伸10min、最后4℃保存。The reaction conditions for PCR amplification were denaturation at 94°C for 5 minutes; then 35 cycles, each cycle including 94°C for 30s, 60°C for 15s, and 72°C for 30s; then extension at 72°C for 10 minutes, and finally storage at 4°C.

PCR-SSCP检测包括:2μL PCR扩增产物加入7μL上样缓冲液,98℃变性10min,然后冰浴5min;3对引物的聚丙烯酰胺凝胶浓度为10%,凝胶交联度为29:1,电压都为150V,过夜电泳。PCR-SSCP detection includes: add 2 μL of PCR amplification product to 7 μL of loading buffer, denature at 98°C for 10 minutes, and then ice-bath for 5 minutes; the polyacrylamide gel concentration of 3 pairs of primers is 10%, and the gel cross-linking degree is 29: 1. The voltage is 150V, electrophoresis overnight.

一种鸡精液品质三基因联合效应诊断试剂盒,包括盒体1,衬垫2,VIPR1引物混合物P3,VIPR2引物混合物P 4,VAR2引物混合物P 5,PCR反应试剂6:10×buffer、dNTP和Taq酶的混合物,超纯水7,上样缓冲液8。A chicken semen quality three-gene combined effect diagnostic kit, including box body 1, liner 2, VIPR1 primer mixture P3, VIPR2 primer mixture P4, VAR2 primer mixture P5, PCR reaction reagent 6: 10×buffer, dNTP and Mixture of Taq enzymes, ultrapure water7, loading buffer8.

VIPR1基因PCR扩增的上下游引物混合物,上游引物序列5’-gctcccgcagatatatggaa-3’;下游引物序列:5’-tgggaggagacaaaacaaca-3’。The upstream and downstream primer mixture of VIPR1 gene PCR amplification, the upstream primer sequence 5'-gctcccgcagatatatggaa-3'; the downstream primer sequence: 5'-tgggaggagacaaaacaaca-3'.

VIPR2基因PCR扩增的上下游引物混合物,上游引物序列:5’-gtgttcacttttgggcacct-3’;下游引物序列:R:5’-cagccaaaaacattggtgtg-3’。A mixture of upstream and downstream primers for PCR amplification of VIPR2 gene, upstream primer sequence: 5'-gtgttcacttttgggcacct-3'; downstream primer sequence: R: 5'-cagccaaaaacattggtgtg-3'.

DAR2基因PCR扩增的上下游引物混合物,上游引物序列:5’-gttggggagtggaggttcag-3’;下游引物序列:5’-attgggctggagatggcaaa-3’。DAR2 gene PCR amplification upstream and downstream primer mixture, upstream primer sequence: 5'-gttggggagtggaggttcag-3'; downstream primer sequence: 5'-attgggctggagatggcaaa-3'.

鸡精液品质密切相关基因诊断试剂盒,其操作方法如下:Chicken semen quality closely related gene diagnosis kit, its operation method is as follows:

1、PCR扩增SNP位点所在片段:采用20μL反应体系:在PCR反应管中加入上下游引物混合物2.0μL、PCR反应试剂3μL、50ng/μL DNA模板1.0μL,加超纯水至20μL,充分混匀后短暂离心。每个上下游引物混合物对应一个PCR反应管。1. PCR amplification of the fragment where the SNP site is located: use 20 μL reaction system: add 2.0 μL of upstream and downstream primer mixture, 3 μL of PCR reaction reagent, 1.0 μL of 50 ng/μL DNA template in the PCR reaction tube, add ultrapure water to 20 μL, fully Mix and centrifuge briefly. Each upstream and downstream primer mix corresponds to one PCR reaction tube.

将PCR反应管放入PCR仪进行反应扩增:先94℃变性5min;再经过35个循环,每个循环包括94℃30s、60℃15s、72℃30s;然后72℃延伸10min、最后4℃保存。Put the PCR reaction tube into the PCR instrument for reaction amplification: first denature at 94°C for 5 minutes; then go through 35 cycles, each cycle includes 94°C for 30s, 60°C for 15s, 72°C for 30s; then extend at 72°C for 10 minutes, and finally 4°C save.

PCR-SSCP检测:2μL PCR扩增产物加入7μL上样缓冲液,98℃变性10min,然后冰浴5min。3对引物的聚丙烯酰胺凝胶浓度为10%,凝胶交联度为29:1,电压都为150V,过夜电泳。PCR-SSCP detection: Add 2 μL of PCR amplification product to 7 μL of loading buffer, denature at 98°C for 10 minutes, and then ice-bath for 5 minutes. The polyacrylamide gel concentration of the 3 pairs of primers was 10%, the gel cross-linking degree was 29:1, the voltage was 150V, and electrophoresis was carried out overnight.

目的片段经SSCP分析,凝胶电泳后用银染显色,得到DNA的SSCP图谱,根据3个图谱中的带型选择VIPR1、VIPR2和DAR2基因的基因型分别为TT/GG/OQ三基因复合基因型的个体,即在73352、36127、201和208处分别为T、G、T和A/G等位基因的个体。The target fragment was analyzed by SSCP, and after gel electrophoresis, it was developed by silver staining to obtain the SSCP map of the DNA. According to the band patterns in the three maps, the genotypes of the VIPR1, VIPR2 and DAR2 genes were selected as TT/GG/OQ three-gene composite Individuals with genotypes, ie individuals with T, G, T and A/G alleles at 73352, 36127, 201 and 208, respectively.

实施例1Example 1

一、VIPR-1、VIPR-2和DAR2三基因SNP检测1. Three-gene SNP detection of VIPR-1, VIPR-2 and DAR2

检测218只优质肉鸡——邵伯鸡三个基因的基因型。血样采自江苏省家禽科学研究所,翅静脉采集血样1.5mL,肝素钠抗凝,-20℃保存。用酚氯仿抽提的法提取基因组DNA,溶于TE,对基因组DNA进行浓度测定后备用。The genotypes of three genes of 218 high-quality broiler chickens—Shaobo chickens were detected. Blood samples were collected from the Jiangsu Institute of Poultry Science, 1.5 mL of blood samples were collected from the wing vein, anticoagulated with sodium heparin, and stored at -20°C. Genomic DNA was extracted by phenol-chloroform extraction, dissolved in TE, and the concentration of genomic DNA was measured for later use.

按照本试剂盒的操作步骤,VIPR1引物的SSCP图谱如图1所示,显示3种基因型(带型表明形成了3种基因型,两种纯合型分别用CC和TT表示,杂合型用CT表示。测序表明TT型与CC型相比在73352 bp处发生了C→T突变(图2)。According to the operation steps of this kit, the SSCP map of VIPR1 primers is shown in Figure 1, showing 3 genotypes (the band pattern indicates the formation of 3 genotypes, the two homozygous types are represented by CC and TT respectively, and the heterozygous type Denoted by CT. Sequencing showed that the TT type had a C→T mutation at 73352 bp compared with the CC type (Figure 2).

VIPR2引物的SSCP图谱如图3所示,显示3种基因型(带型表明形成了3种基因型,两种纯合型分别用AA和GG表示,杂合型用AG表示,测序表明GG型在36127bp处发生了G→A的突(图4)。The SSCP map of VIPR2 primers is shown in Figure 3, showing three genotypes (the band pattern indicates the formation of three genotypes, the two homozygous types are represented by AA and GG, and the heterozygous type is represented by AG, and sequencing shows that the GG type A G→A mutation occurred at 36127bp (Fig. 4).

DAR2引物SSCP图谱如图5所示,显示6种基因型(带型表明形成了6种基因型,三种纯合型分别用OO、PP和QQ表示,相应的杂合型用OP、OQ和PQ表示,OO型在201和208bp处的等位基因分别为C和A,PP型在相应的位点分别为C和A,QQ型在相应的位点分别为T和G,分别定义为OO、OP、OQ、PP、PQ和QQ基因型。取OO、PP和QQ3种基因型的PCR产物片段进行测序。结果发现:QQ与OO相比在201处发生C→T突变,208处发生A→G突变(图6)。The SSCP map of DAR2 primers is shown in Figure 5, showing 6 genotypes (the band pattern indicates that 6 genotypes have been formed, and the three homozygous types are represented by OO, PP and QQ respectively, and the corresponding heterozygous types are represented by OP, OQ and PQ means that the alleles at 201 and 208bp of the OO type are C and A respectively, the PP type is C and A at the corresponding positions, and the QQ type is T and G at the corresponding positions, respectively, which are defined as OO , OP, OQ, PP, PQ, and QQ genotypes. The PCR product fragments of OO, PP, and QQ genotypes were sequenced. The results found that compared with OO, QQ had a C→T mutation at 201 places, and A at 208 places. → G mutation (Fig. 6).

二、VIPR1、VIPR2和DAR2基因复合基因型对优质肉鸡鸡冠及精液品质的效应分析2. Analysis of the effect of composite genotypes of VIPR1, VIPR2 and DAR2 genes on comb and semen quality of high-quality broilers

配合下列模型分析VIPR-1、VIPR-2和DAR2复合基因型对优质肉鸡鸡冠及精液品质的影响:Y=μ+VIPR1基因的基因型效应+VIPR2基因的基因型效应+DAR2基因的基因型效应+残差效应。优质肉鸡复合基因型TT/GG/OQ与不同复合基因型鸡冠及精液品质的比较见表1。Cooperate with the following model to analyze the effect of VIPR-1, VIPR-2 and DAR2 compound genotypes on high-quality broiler comb and semen quality: Y=μ+Genotype effect of VIPR1 gene+Genotype effect of VIPR2 gene+Genotype effect of DAR2 gene + residual effects. The comparisons of comb and semen quality between compound genotype TT/GG/OQ and different compound genotypes of high-quality broilers are shown in Table 1.

表1优质肉鸡复合基因型TT/GG/OQ与不同复合基因型精液品质的比较Table 1 Comparison of semen quality between compound genotype TT/GG/OQ and different compound genotypes of high-quality broilers

复合基因型composite genotype 密度(亿/ml)Density (100 million/ml) 精液量(μl)Semen volume (μl) 活力vitality 畸形率%Deformation rate% TT/GG/OPTT/GG/OP 35.98±1.02a 35.98±1.02 a 621±22a 621±22 a 8.33±0.13a 8.33±0.13 a 4.01±0.334.01±0.33 CC/GG/OQCC/GG/OQ 35.44±1.31a 35.44±1.31 a 582±25ab 582± 25ab 8.31±0.18a 8.31±0.18 a 4.21±0.354.21±0.35 TT/AA/PPTT/AA/PP 35.12±1.23a 35.12±1.23 a 551±21b 551± 21b 8.12±0.15ab 8.12± 0.15ab 4.12±0.284.12±0.28 CT/AA/PPCT/AA/PP 34.62±1.52b 34.62± 1.52b 579±24ab 579± 24ab 8.30±0.16a 8.30±0.16 a 4.20±0.314.20±0.31 CT/GG/OPCT/GG/OP 35.02±1.21ab 35.02± 1.21ab 584±23ab 584± 23ab 8.24±0.23a 8.24±0.23 a 4.13±0.364.13±0.36 CC/GG/OPCC/GG/OP 34.48±1.22b 34.48± 1.22b 587±25ab 587± 25ab 8.16±0.12ab 8.16± 0.12ab 4.10±0.184.10±0.18 CC/AA/OOCC/AA/OO 34.07±1.23b 34.07± 1.23b 536±42b 536± 42b 7.50±0.15b 7.50± 0.15b 4.20±0.364.20±0.36 CT/AA/OOCT/AA/OO 34.54±1.28b 34.54± 1.28b 554±25b 554± 25b 7.86±0.19b 7.86± 0.19b 4.44±0.684.44±0.68 CT/AA/OPCT/AA/OP 35.04±1.36ab 35.04± 1.36ab 583±34ab 583± 34ab 8.11±0.18ab 8.11± 0.18ab 4.18±0.474.18±0.47 CC/AG/OOCC/AG/OO 35.54±1.29a 35.54±1.29 a 587±28ab 587± 28ab 8.11±0.31ab 8.11± 0.31ab 4.18±0.394.18±0.39 TT/GG/OOTT/GG/OO 35.68±1.47ab 35.68± 1.47ab 608±16ab 608± 16ab 8.11±0.07ab 8.11± 0.07ab 4.02±0.624.02±0.62 CC/GG/OOCC/GG/OO 34.59±1.39b 34.59± 1.39b 575±31ab 575± 31ab 8.63±0.11a 8.63±0.11 a 4.20±0.584.20±0.58 TT/AA/OOTT/AA/OO 34.81±1.42ab 34.81± 1.42ab 581±28ab 581± 28ab 8.37±0.23a 8.37±0.23 a 4.21±0.394.21±0.39 TT/AG/OPTT/AG/OP 35.59±1.18a 35.59±1.18 a 606±37a 606± 37a 8.11±0.26ab 8.11± 0.26ab 4.18±0.474.18±0.47 CC/AA/OPCC/AA/OP 34.24±1.37b 34.24± 1.37b 568±36b 568± 36b 7.99±0.29b 7.99± 0.29b 4.24±0.524.24±0.52 TT/AA/OPTT/AA/OP 35.68±1.31a 35.68±1.31 a 603±25a 603±25 a 8.31±0.18a 8.31±0.18 a 4.22±0.354.22±0.35 CT/GG/OOCT/GG/OO 35.12±1.23ab 35.12± 1.23ab 572±21ab 572± 21ab 8.12±0.15ab 8.12± 0.15ab 4.02±0.284.02±0.28

注:同行数据肩标不同小写字母表示差异显著(P<0.05)。Note: Different lowercase letters on the shoulders of peer data indicate significant differences (P<0.05).

由表可见,三基因复合基因型TT/GG/OQ的个体精液品质最好,精液量比CC/AA/OO基因型个体多15.9%(P<0.05),比CT/AA/OO基因型个体多12.1%(P<0.05);精子密度TT/GG/OQ的个体比CC/AA/OO个体多多5.6%(P<0.05),比CC/AA/OP个体多5.1%(P<0.05);精子活力TT/GG/OP型个体与CC/AA/OO、CT/AA/OO、CC/AA/OP个体的差异显著(P<0.05);精子畸形率各基因型个体间虽然差异不显著,但TT/GG/OQ型个体的畸形率小于其他基因型个体。在群体中筛选复合基因型TT/GG/OQ可以提高优质鸡精液品质,所以根据VIPR1、VIPR2和DAR2基因的SSCP图谱筛选TT/GG/OQ三基因复合基因型可作为提早优质肉鸡鸡冠及精液品质的方法。It can be seen from the table that the semen quality of individuals with the three-gene compound genotype TT/GG/OQ is the best, and the semen volume is 15.9% higher than that of individuals with CC/AA/OO genotype (P<0.05), and that of individuals with genotype CT/AA/OO 12.1% more (P<0.05); the sperm density of TT/GG/OQ individuals was 5.6% more than CC/AA/OO individuals (P<0.05), and 5.1% more than CC/AA/OP individuals (P<0.05); Sperm motility was significantly different between TT/GG/OP individuals and CC/AA/OO, CT/AA/OO, CC/AA/OP individuals (P<0.05); although there was no significant difference in sperm deformity rate between genotype individuals, However, the deformity rate of TT/GG/OQ individuals was lower than that of other genotypes. Screening the compound genotype TT/GG/OQ in the population can improve the quality of high-quality chicken semen, so the screening of the TT/GG/OQ three-gene compound genotype according to the SSCP map of the VIPR1, VIPR2 and DAR2 genes can be used as an early method for high-quality broiler combs and semen quality Methods.

<110> 江苏省家禽科学研究所<110> Jiangsu Institute of Poultry Science

<120>提高鸡精液品质方法及其引物、试剂盒及其使用方法<120> Method for Improving Chicken Semen Quality and Its Primers, Kit and Using Method

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<220><220>

<221>VIPR1基因PCR扩增的上游引物<221>Upstream primers for PCR amplification of VIPR1 gene

<223><223>

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gctcccgcag atatatggaa 20gctcccgcag atatatggaa 20

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<220><220>

<221> VIPR1基因PCR扩增的下游引物<221> Downstream primers for PCR amplification of VIPR1 gene

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tgggaggaga caaaacaaca 20 tgggaggaga caaaacaaca 20

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<221>VIPR2基因PCR扩增的上游引物<221>Upstream primers for PCR amplification of VIPR2 gene

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gtgttcactt ttgggcacct 20gtgttcactt ttgggcacct 20

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cagccaaaaa cattggtgtg 20cagccaaaaa cattggtgtg 20

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<220><220>

<221>DAR2基因PCR扩增的上游引物<221>Upstream primers for PCR amplification of DAR2 gene

<223><223>

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gttggggagt ggaggttcag 20gttggggagt ggaggttcag 20

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<220><220>

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<223><223>

<400> 6<400> 6

attgggctgg agatggcaaa 20attgggctgg agatggcaaa 20

Claims (7)

1. 鸡精液品质密切相关基因用引物,包括血管活性肠肽受体1VIPR1基因PCR扩增的上下游引物混合物、血管活性肠肽受体2VIPR2基因PCR扩增的上下游引物混合物、多巴胺受体2 DAR2基因PCR扩增的上下游引物混合物; 1. Primers for genes closely related to chicken semen quality, including upstream and downstream primer mixtures for PCR amplification of vasoactive intestinal peptide receptor 1 VIPR1 gene, upstream and downstream primer mixtures for PCR amplification of vasoactive intestinal peptide receptor 2 VIPR2 gene, and dopamine receptor 2 DAR2 gene PCR amplification upstream and downstream primer mix; 所述血管活性肠肽受体1VIPR1基因PCR扩增的上下游引物混合物中上游引物序列:5’- gctcccgcagatatatggaa -3’;下游引物序列 :5’-tgggaggagacaaaacaaca-3’; In the upstream and downstream primer mixture of the vasoactive intestinal peptide receptor 1 VIPR1 gene PCR amplification, the upstream primer sequence: 5'-gctcccgcagatatatggaa-3'; the downstream primer sequence: 5'-tgggaggagacaaaacaaca-3'; 所述血管活性肠肽受体2VIPR2基因PCR扩增的上下游引物混合物的上游引物序列: 5’-gtgttcacttttgggcacct-3’;下游引物序列 :R:5’-cagccaaaaacattggtgtg -3’ ; The upstream primer sequence of the upstream and downstream primer mixture of the vasoactive intestinal peptide receptor 2 VIPR2 gene PCR amplification: 5'-gtgttcacttttgggcacct-3'; downstream primer sequence : R:5'-cagccaaaaacattggtgtg-3'; 所述多巴胺受体2DAR2基因PCR扩增的上下游引物混合物,上游引物序列:5’-gttggggagtggaggttcag-3’;下游引物序列 :5’-attgggctggagatggcaaa -3’。 The upstream and downstream primer mixture of the PCR amplification of the dopamine receptor 2DAR2 gene, the upstream primer sequence: 5'-gttggggagtggaggttcag-3'; the downstream primer sequence : 5'-attgggctggagatggcaaa-3'. 2. 利用复合基因型提高鸡精液品质的方法,其特征是,提取待测样本的鸡基因组DNA,待测样本的鸡基因组DNA基因序列经权利要求1所述的鸡精液品质密切相关基因用引物进行PCR扩增SNP位点所在片段,扩增得到192、250和270 bp的目的片段,目的片段进行PCR-SSCP检测后,凝胶电泳后用银染显色,分别得到DNA的SSCP图谱,根据3个图谱中的带型选择TT/GG/OQ三基因复合基因型的个体,即在73352、36127、201和208处分别为T、G、T和A/G等位基因的个体。 2. Utilize the method for compound genotype to improve chicken semen quality, it is characterized in that, extract the chicken genome DNA of sample to be tested, the chicken genome DNA gene sequence of sample to be tested passes through chicken semen quality described in claim 1 closely related gene with primer The fragments where the SNP sites are located were amplified by PCR, and the target fragments of 192, 250 and 270 bp were amplified. After the target fragments were detected by PCR-SSCP, they were developed by silver staining after gel electrophoresis, and the SSCP maps of the DNA were obtained respectively. Individuals with TT/GG/OQ trigene compound genotype were selected for the band patterns in the three maps, that is, individuals with T, G, T and A/G alleles at 73352, 36127, 201 and 208, respectively. 3. 根据权利要求2所述的利用复合基因型提高鸡精液品质的方法,其特征是,所述PCR扩增SNP位点所在片段的反应体系20 μL:在PCR反应管中加入血管活性肠肽受体1VIPR1基因PCR扩增的上下游引物混合物或血管活性肠肽受体2VIPR2基因PCR扩增的上下游引物混合物或多巴胺受体2 DAR2基因PCR扩增的上下游引物混合物2.0 µL、PCR反应试剂3µL、50 ng/µL DNA模板1.0 µL,加超纯水至20µL,充分混匀后短暂离心。 3. the method utilizing composite genotype to improve chicken semen quality according to claim 2, is characterized in that, the reaction system 20 of described PCR amplification SNP site fragment μL: Add the upstream and downstream primer mixture for PCR amplification of vasoactive intestinal peptide receptor 1 VIPR1 gene or the upstream and downstream primer mixture for PCR amplification of vasoactive intestinal peptide receptor 2 VIPR2 gene or the PCR amplification of dopamine receptor 2 DAR2 gene in the PCR reaction tube Added upstream and downstream primer mix 2.0 µL, PCR reaction reagent 3 µL, 50 ng/µL DNA template 1.0 µL, add ultrapure water to 20 µL, mix well and centrifuge briefly. 4. 根据权利要求2所述的利用复合基因型提高鸡精液品质的方法,其特征是,所述PCR扩增的反应条件为先94℃ 变性5min;再经过35个循环,每个循环包括94℃30s、60℃ 15s、72℃ 30s;然后72℃ 延伸10 min、最后4℃保存。 4. the method utilizing compound genotype to improve chicken semen quality according to claim 2, is characterized in that, the reaction condition of described PCR amplification is first 94 ℃ denaturation 5min; Through 35 cycles again, each cycle comprises 94 30s at ℃, 15s at 60℃, 30s at 72℃; then extend at 72℃ for 10 minutes, and finally store at 4℃. 5. 根据权利要求2所述的利用复合基因型提高鸡精液品质的方法,其特征是,所述PCR-SSCP检测包括:2 μL PCR 扩增产物加入 7 μL 上样缓冲液,98 ℃变性 10 min,然后冰浴 5 min;3 对引物的聚丙烯酰胺凝胶浓度为 10 %,凝胶交联度为 29:1,电压都为 150V,过夜电泳。 5. The method for improving chicken semen quality by compound genotype according to claim 2, characterized in that, the PCR-SSCP detection comprises: 2 μL PCR amplification product is added to 7 μL The loading buffer was denatured at 98°C for 10 min, and then kept in ice bath for 5 min; the polyacrylamide gel concentration of the 3 pairs of primers was 10%, the gel cross-linking degree was 29:1, and the voltage was 150V, and electrophoresis was performed overnight. 6. 一种鸡精液品质三基因联合效应诊断试剂盒,包括盒体(1)和盒体内的衬垫(2),其特征是,所述衬垫(2)的孔腔内设有权利要求1所述的血管活性肠肽受体1 VIPR1基因PCR扩增的上下游引物混合物P(3)、所述血管活性肠肽受体2VIPR2基因PCR扩增的上下游引物混合物P(4)、所述多巴胺受体2 DAR2基因PCR扩增的上下游引物混合物P(5)以及PCR反应试剂(6)、超纯水(7)、上样缓冲液(8);所述PCR反应试剂(6)为10×buffer、dNTP 和Taq酶的混合物。 6. A chicken semen quality three-gene combined effect diagnostic kit, comprising a box body (1) and a liner (2) in the box body, characterized in that the cavity of the liner (2) is provided with the claim 1 The upstream and downstream primer mixture P (3) for the PCR amplification of the vasoactive intestinal peptide receptor 1 VIPR1 gene, the upstream and downstream primer mixture P (4) for the PCR amplification of the vasoactive intestinal peptide receptor 2 VIPR2 gene, the The above-mentioned dopamine receptor 2 DAR2 gene PCR amplification upstream and downstream primer mixture P (5), PCR reaction reagent (6), ultrapure water (7), loading buffer (8); the PCR reaction reagent (6) It is a mixture of 10×buffer, dNTP and Taq enzyme. 7. 鸡精液品质三基因联合效应诊断试剂盒的使用方法,其特征是,包括以下步骤: 7. The method for using the chicken semen quality three-gene combined effect diagnostic kit is characterized in that it comprises the following steps: (1)PCR扩增SNP位点所在片段:采用20 μL反应体系:在PCR反应管中加入血管活性肠肽受体1VIPR1基因PCR扩增的上下游引物混合物或血管活性肠肽受体2VIPR2基因PCR扩增的上下游引物混合物或多巴胺受体2 DAR2基因PCR扩增的上下游引物混合物2.0 µL、PCR反应试剂3µL、50 ng/µL DNA模板1.0 µL,加超纯水至20µL,充分混匀后短暂离心;所述PCR反应试剂(6)为10×buffer、dNTP 和Taq酶的混合物; (1) PCR amplification of the fragment where the SNP site is located: use 20 μL reaction system: add the upstream and downstream primer mixture for PCR amplification of vasoactive intestinal peptide receptor 1 VIPR1 gene or PCR of vasoactive intestinal peptide receptor 2 VIPR2 gene in the PCR reaction tube Amplified upstream and downstream primer mixture or dopamine receptor 2 DAR2 gene PCR amplification upstream and downstream primer mixture 2.0 µL, PCR reaction reagent 3 µL, 50 ng/µL DNA template 1.0 µL, add ultrapure water to 20 µL, mix well brief centrifugation; the PCR reaction reagent (6) is a mixture of 10×buffer, dNTP and Taq enzyme; (2)将PCR反应管放入PCR仪进行反应扩增:先94℃ 变性5min;再经过35个循环,每个循环包括94℃30s、60℃ 15s、72℃ 30s;然后72℃ 延伸10 min、最后4℃保存; (2) Put the PCR reaction tube into the PCR instrument for reaction amplification: denature at 94°C for 5 minutes; then go through 35 cycles, each cycle including 94°C for 30s, 60°C for 15s, and 72°C for 30s; then extend at 72°C for 10 minutes , and finally stored at 4°C; (3)PCR-SSCP检测: 2 μL PCR 扩增产物加入 7 μL 上样缓冲液,98 ℃变性 10 min,然后冰浴 5 min;3 对引物的聚丙烯酰胺凝胶浓度为 10 %,凝胶交联度为 29:1,电压都为 150V,过夜电泳; (3) PCR-SSCP detection: Add 2 μL PCR amplification product to 7 μL Loading buffer, denatured at 98°C for 10 min, then ice-bathed for 5 min; the polyacrylamide gel concentration of 3 pairs of primers was 10%, the gel cross-linking degree was 29:1, the voltage was 150V, and electrophoresis was carried out overnight; (4)目的片段经SSCP分析,凝胶电泳后用银染显色,得到DNA的SSCP图谱,根据3个图谱中的带型选择VIPR1、VIPR2和DAR2基因的基因型分别为TT/GG/OQ三基因复合基因型的个体,即在73352、36127、201和208处分别为T、G、T和A/G等位基因的个体。 (4) The target fragment was analyzed by SSCP, and after gel electrophoresis, it was developed by silver staining to obtain the SSCP map of the DNA. According to the band patterns in the three maps, the genotypes of VIPR1, VIPR2 and DAR2 were selected as TT/GG/OQ Individuals with a trigene compound genotype, ie individuals with T, G, T and A/G alleles at 73352, 36127, 201 and 208, respectively.
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