CN104293785A - Application of microRNA302s in preparation of antitumor drugs - Google Patents
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Abstract
Description
技术领域 technical field
本发明涉及microRNA302s的新用途。 The present invention relates to a new application of microRNA302s. the
背景技术 Background technique
microRNAs(miRNAs)是人类新发现的一类非编码小分子RNA,广泛分布于真核细胞内。miRNAs通过与靶基因互补位点配对结合,在转录后水平负性调控靶基因的表达,参与生长发育、细胞增殖、细胞凋亡、细胞分化等生命过程。成熟的miRNAs长17~24bp,一个miRNA分子能够调控多种基因。因而有研究发现,相对于编码蛋白质的mRNA分子来说,一些基因的表达更依赖于miRNAs的调控水平。 microRNAs (miRNAs) are a class of non-coding small RNAs newly discovered by humans, which are widely distributed in eukaryotic cells. miRNAs negatively regulate the expression of target genes at the post-transcriptional level by pairing with the complementary sites of target genes, and participate in life processes such as growth and development, cell proliferation, cell apoptosis, and cell differentiation. Mature miRNAs are 17-24bp long, and one miRNA molecule can regulate multiple genes. Therefore, studies have found that the expression of some genes is more dependent on the regulation level of miRNAs than protein-coding mRNA molecules. the
microRNA302s,即miR-302家族microRNA,包括miR-302a、miR-302b、miR-302c、miR-302d,成簇聚集在人类4号染色体上,是胚胎干细胞特异性表达的miRNAs。目前,关于miR-302家族microRNA,研究均集中在于胚胎发育相关的基因上,比如,研究发现,miR-302家族的每个成员都能同时调节大约445个基因,并且他们所调节的大部分基因都是相同的,这些基因的大多涉及早期胚胎发育相关的信号分子或影响细胞分化的细胞因子,转入miR-302s后可以抑制这些基因的作用,进而抑制组织细胞的分化,有可能把细胞重编程为胚胎干细胞样的状态。 microRNA302s, the miR-302 family of microRNAs, including miR-302a, miR-302b, miR-302c, and miR-302d, clustered on human chromosome 4 and are miRNAs specifically expressed in embryonic stem cells. At present, studies on microRNAs of the miR-302 family have focused on genes related to embryonic development. For example, studies have found that each member of the miR-302 family can simultaneously regulate about 445 genes, and most of the genes they regulate They are all the same. Most of these genes are involved in early embryonic development-related signaling molecules or cytokines that affect cell differentiation. After miR-302s is transferred, it can inhibit the function of these genes, thereby inhibiting the differentiation of tissue cells, and it is possible to regenerate cells. programmed to an embryonic stem cell-like state. the
发明内容 Contents of the invention
本发明提供了miR-302家族microRNA在制备抗肿瘤药物中的新用途。 The invention provides a new application of miR-302 family microRNA in the preparation of antitumor drugs. the
首先,本发明提供了SEQ ID NO.1~5所示的核苷酸序列。 First, the present invention provides the nucleotide sequence shown in SEQ ID NO.1-5. the
SEQ ID NO.1~4所示的核苷酸序列分别为miR-302a、miR-302b、miR-302c、miR-302d,SEQ ID NO.5所示的核苷酸序列为miR-302a、miR-302b、miR-302c和miR-302d串联后的基因序列:miR-302s。 The nucleotide sequences shown in SEQ ID NO.1~4 are respectively miR-302a, miR-302b, miR-302c, miR-302d, and the nucleotide sequences shown in SEQ ID NO.5 are miR-302a, miR Gene sequence of -302b, miR-302c and miR-302d in series: miR-302s. the
miR-302a:CCACCACUUAAACGUGGAUGUACUUGCUUUGAAACUAAAGAAGUAAGUGCUUCCAUGUUUUGGUGAUGG; miR-302a:CCACCACUUAAACGUGGAUGUACUUGCUUUGAAACUAAAAGAAGUAAGUGCUUCCAUGUUUUGGUGAUGG;
miR-302b:GCUCCCUUCAACUUUAACAUGGAAGUGCUUUCUGUGACUUUAAAAGUAAGUGCUUCCAUGUUUUAGUAGGAGU; miR-302b:GCUCCCUUCAACUUUAACAUGGAAGUGCUUUCUGUGACUUUAAAAGUAAGUGCUUCCAUGUUUUUAGUAGGAGU;
miR-302c:CCUUUGCUUUAACAUGGGGGUACCUGCUGUGUGAAACAAAAGUAAGUGCUUCCAUGUUUCAGUGGAGG; miR-302c:CCUUUGCUUUUAACAUGGGGGUACCUGCUGUGUGAAACAAAAGUAAGUGCUUCCAUGUUUCAGUGGAGG;
miR-302d:CCUCUACUUUAACAUGGAGGCACUUGCUGUGACAUGACAAAAAUAAGUGCUUCCAUGUUUGAGUGUGG。 miR-302d: CCUCUACUUUAACAUGGAGGCACUUGCUGUGACAUGACAAAAAAUAAGUGCUUCCAUGUUUUGAGUGUGG. the
miR-302s(SEQ ID NO.5): miR-302s(SEQ ID NO.5):
CCACCACTTAAACGTGGATGTACTTGCTTTGAAACTAAAGAAGTAAGTGCTTCCATGTTTTGGTGATGGAGATCTGCTCCCTTCAACTTTAACATGGAAGTGCTTTCTGTGACTTTAAAAGTAAGTGCTTCCATGTTTTAGTAGGAGTCATATGCCTTTGCTTTAACATGGGGGTACCTGCTGTGTGAAACAAAAGTAAGTGCTTCCATGTTTCAGTGGAGGTCTAGACCTCTACTTTAACATGGAGGCACTTGCTGTGACATGACAAAAATAAGTGCTTCCATGTTTGAGTGTGG CCACCACTTAAACGTGGATGTACTTGCTTTGAAACTAAAGAAGTAAGTGCTTCCATGTTTTGGTGATGGAGATCTGCTCCCTTCAACTTTAACATGGAAGTGCTTTCTGTGACTTTAAAAGTAAGTGCTTCCATGTTTTAGTAGGAGTCATATGCCTTTGCTTTAACATGGGGGTACCTGCTGTGTGAAACAAAAGTAAGTGCTTCCATGTTTCAGTGGAGGTCTAGACCTCTACTTTAACATGGAGGCACTTGCTGTGACATGACAAAAATAAGTGCTTCCATGTTTGAGTGTGG
本发明还提供了SEQ ID NO.1~5所示的核苷酸序列中的任意一个或任意多个序列在制备抗肿瘤药物中的用途。所述抗肿瘤药物是抗神经瘤药物。所述抗神经瘤药物是抗神经母细胞瘤药物。 The present invention also provides the use of any one or multiple sequences in the nucleotide sequences shown in SEQ ID NO.1-5 in the preparation of antitumor drugs. The antineoplastic drug is an antineuroma drug. The anti-neuroma drug is an anti-neuroblastoma drug. the
本发明还提供了一种重组质粒,它包括SEQ ID NO.1~5任意一项所示的核苷酸序列。优选地,所述重组质粒是重组GV266质粒。 The present invention also provides a recombinant plasmid, which includes the nucleotide sequence shown in any one of SEQ ID NO.1-5. Preferably, the recombinant plasmid is a recombinant GV266 plasmid. the
本发明还提供了所述重组质粒在制备治疗抗肿瘤药物中的用途。优选地,所述抗肿瘤药物是抗神经瘤药物。进一步优选地,所述抗神经瘤药物是抗神经母细胞瘤药物。 The invention also provides the use of the recombinant plasmid in the preparation of antitumor drugs. Preferably, the antineoplastic drug is an antineuroma drug. Further preferably, the anti-neuroma drug is an anti-neuroblastoma drug. the
本发明重组慢病毒,它包括SEQ ID NO.1~5任意一项所示的核苷酸序列。 The recombinant lentivirus of the present invention comprises the nucleotide sequence shown in any one of SEQ ID NO.1-5. the
本发明重组慢病毒,它包括前述重组质粒。 The recombinant lentivirus of the present invention includes the aforementioned recombinant plasmid. the
本发明还提供了所述重组慢病毒在制备治疗抗肿瘤药物中的用途。优选地,所述抗肿瘤药物是抗神经瘤药物。进一步优选地,所述抗神经瘤药物是抗神经母细胞瘤药物。 The present invention also provides the use of the recombinant lentivirus in the preparation of antitumor drugs. Preferably, the antineoplastic drug is an antineuroma drug. Further preferably, the anti-neuroma drug is an anti-neuroblastoma drug. the
本发明肿瘤细胞筛查试剂盒,它包括检测细胞microRNA302a表达水平的试剂。 The tumor cell screening kit of the present invention includes reagents for detecting the expression level of microRNA302a in cells. the
优选地,所述抗肿瘤药物是抗神经瘤药物。进一步优选地,所述抗神经瘤药物是抗神经母细胞瘤药物。 Preferably, the antineoplastic drug is an antineuroma drug. Further preferably, the anti-neuroma drug is an anti-neuroblastoma drug. the
本发明提供的SEQ ID NO.1~5所示的核苷酸序列,可以诱导肿瘤细胞凋亡,抑制肿瘤细胞的生长,可用于制备抗肿瘤药物,本发明肿瘤细胞筛查试剂盒可以有效筛查待检细胞是否为肿瘤细胞,具有良好的临床应用前景。 The nucleotide sequences shown in SEQ ID NO.1-5 provided by the present invention can induce tumor cell apoptosis, inhibit the growth of tumor cells, and can be used to prepare antitumor drugs. The tumor cell screening kit of the present invention can effectively screen Checking whether the cells to be tested are tumor cells has a good clinical application prospect. the
显然,根据本发明的上述内容,按照本领域的普通技术知识和惯用手段,在不脱离本发明上述基本技术思想前提下,还可以做出其它多种形式的修改、替换或变更。 Apparently, according to the above content of the present invention, according to common technical knowledge and conventional means in this field, without departing from the above basic technical idea of the present invention, other various forms of modification, replacement or change can also be made. the
以下通过实施例形式的具体实施方式,对本发明的上述内容再作进一步的详细说明。但不应将此理解为本发明上述主题的范围仅限于以下的实例。凡基于本发明上述内容所实现的技术均属于本发明的范围。 The above-mentioned content of the present invention will be further described in detail below through specific implementation in the form of examples. However, this should not be construed as limiting the scope of the above-mentioned subject matter of the present invention to the following examples. All technologies realized based on the above contents of the present invention belong to the scope of the present invention. the
附图说明 Description of drawings
图1miR-302a在293细胞和SK细胞中的表达情况比较 Figure 1 Comparison of the expression of miR-302a in 293 cells and SK cells
图2目的基因真核表达载体构建流程图 Figure 2 Flowchart for the construction of target gene eukaryotic expression vector
图3载体图谱 Figure 3 Carrier map
图4Marker自上而下依次为:5kb,3kb,2kb,1.5kb,1Kb,750bp,500bp,250bp,100bp,2#:酶切的目的基因质粒; Figure 4 Marker from top to bottom: 5kb, 3kb, 2kb, 1.5kb, 1Kb, 750bp, 500bp, 250bp, 100bp, 2#: Enzyme-digested target gene plasmid;
图5电泳图说明:1#:阴性对照(ddH2O);2#:阴性对照(空载自连对照组);3#:阳性对照(GAPDH);4#:Marker自上而下依次为5kb,3kb,2kb,1.5kb,1Kb,750bp,500bp,250bp,100bp;5#-12#:hsa-mir-302,a,b,c,d串联1-8号转化子。 Figure 5 Electropherogram description: 1#: Negative control (ddH2O); 2#: Negative control (empty self-connected control group); 3#: Positive control (GAPDH); 4#: Marker 5kb from top to bottom, 3kb, 2kb, 1.5kb, 1Kb, 750bp, 500bp, 250bp, 100bp; 5#-12#: hsa-mir-302, a, b, c, d transformants 1-8 in series. the
图6测序图谱,图6-1为第1~295bp的测序图谱;图6-2为第296~601bp的测序图谱;图6-3为第602~807bp的测序图谱;图6-4为第808~1081bp的测度图谱;图6-5为第1081~1159bp的测序谱图。 Figure 6 sequence map, Figure 6-1 is the sequence map of the 1st to 295bp; Figure 6-2 is the sequence map of the 296th to 601bp; Figure 6-3 is the sequence map of the 602nd to 807bp; Figure 6-4 is the sequence map of the first The measurement spectrum of 808-1081bp; Figure 6-5 is the sequencing spectrum of 1081-1159bp. the
图7病毒感染图片(1E1uL100x b) Figure 7 Virus infection pictures (1E1uL100x b)
图8病毒感染图片(1E1uL100x g) Figure 8 Virus infection pictures (1E1uL100x g)
图9病毒感染图片(1E1uL100x r) Figure 9 Virus infection pictures (1E1uL100x r)
图10病毒感染图片(1E1uL200x b) Figure 10 Virus infection pictures (1E1uL200x b)
图11病毒感染图片(1E1uL400x b) Figure 11 Picture of virus infection (1E1uL400x b)
图12定量PCR实验结果 Figure 12 Quantitative PCR experiment results
图13Real-time PCR检测慢病毒转染后miR-302s表达情况 Figure 13 Real-time PCR detection of miR-302s expression after lentiviral transfection
图14miR-302a在SK-目的病毒转染细胞和SK-目对照细胞的表达情况 Figure 14 The expression of miR-302a in SK-purpose virus transfected cells and SK-purpose control cells
图15miR-302b在SK-目的病毒转染细胞和SK-目对照细胞的表达情况 Figure 15 The expression of miR-302b in SK-purpose virus transfected cells and SK-purpose control cells
图16miR-302c在SK-目的病毒转染细胞和SK-目对照细胞的表达情况 Figure 16 The expression of miR-302c in SK-purpose virus transfected cells and SK-me control cells
图17miR-302d在SK-目的病毒转染细胞和SK-目对照细胞的表达情况 Figure 17 The expression of miR-302d in SK-purpose virus transfected cells and SK-me control cells
图18SK-N-SH细胞感染后48hHoechst33342染色实验结果 Figure 18 Hoechst33342 staining experiment results 48h after SK-N-SH cell infection
图19SK-N-SH细胞感染后48hHoechst33342染色检测凋亡结果 Figure 19 Hoechst33342 staining detection of apoptosis results of SK-N-SH cells 48h after infection
图20流失细胞技术检测miR-302s过表达慢病毒转染后48h时间点SK-N-SH细胞凋亡率的变化情况 Figure 20 The cell loss technique detects the changes in the apoptosis rate of SK-N-SH cells at 48 hours after miR-302s overexpression lentivirus transfection
图21流失细胞技术检测miR-302s过表达慢病毒转染后72h时间点SK-N-SH细胞凋亡率的变化情况 Figure 21 The change of the apoptosis rate of SK-N-SH cells at 72 hours after miR-302s overexpression lentivirus transfection detected by cell loss technique
图22SK-N-SH细胞感染后48h TUNEL染色实验结果 Figure 22 TUNEL staining experiment results 48h after SK-N-SH cell infection
图23SK-N-SH细胞感染后48h TUNEL染色检测凋亡结果 Figure 23 48h after SK-N-SH cells were infected, the results of TUNEL staining to detect apoptosis
图24CASP-3在SK正常细胞和miR-302s转染细胞中的表达情况 Figure 24 The expression of CASP-3 in SK normal cells and miR-302s transfected cells
图25Bax在SK正常细胞和miR-302s转染细胞中的表达情况 Figure 25 The expression of Bax in SK normal cells and miR-302s transfected cells
图26MCL-1在SK正常细胞和miR-302s转染细胞中的表达情况 Figure 26 The expression of MCL-1 in SK normal cells and miR-302s transfected cells
图27CCND-1在SK正常细胞和miR-302s转染细胞中的表达情况 Figure 27 The expression of CCND-1 in SK normal cells and miR-302s transfected cells
图28BMI-1在SK正常细胞核miR-302s转染细胞中的表达比较 Figure 28 Comparison of BMI-1 expression in SK normal cell nuclei miR-302s transfected cells
图29p16Ink4a在SK正常细胞核miR-302s转染细胞中的表达比较 Figure 29 Comparison of expression of p16Ink4a in miR-302s transfected cells of normal SK nuclei
图30p53在SK正常细胞核miR-302s转染细胞中的表达比较 Figure 30 Comparison of expression of p53 in SK normal cell nuclei miR-302s transfected cells
图31Western Blotting检测BMI-1的表达情况 Figure 31 Western Blotting to detect the expression of BMI-1
图32Western Blotting检测p16Ink4a,p53,Bax的表达情况 Figure 32 Western Blotting detection of p16Ink4a, p53, Bax expression
图33干扰前两组裸鼠的体重 The body weight of the two groups of nude mice before the interference in Figure 33
图34干扰前两组裸鼠肿瘤体积 Figure 34 Tumor volume of two groups of nude mice before interference
图35处死前称重图 Figure 35 Weighing chart before execution
图36处死前测得两组肿瘤体积图 Figure 36 The tumor volumes of the two groups measured before execution
图37处死前移植瘤活体比较图 Figure 37 Comparison chart of live xenograft tumors before execution
图38处死前移植瘤活体比较图 Figure 38 Comparison chart of transplanted tumors in vivo before execution
图39处死后取得两组移植瘤瘤重比较图 Figure 39 Comparison chart of transplanted tumor weight between two groups obtained after death
图40处死后取得两组移植瘤比较图 Figure 40 Comparison chart of transplanted tumors obtained after death
图41移植瘤生长曲线图 Figure 41 Growth curve of transplanted tumor
图42移植瘤生长曲线图 Figure 42 Growth curve of transplanted tumor
图43移植瘤增长倍数图 Figure 43 Growth multiples of transplanted tumors
具体实施方式 Detailed ways
实施例1 肿瘤细胞的microR-302a表达情况 Example 1 The expression of microR-302a in tumor cells
1、实验方法 1. Experimental method
(1)细胞复苏,培养,传代(293细胞和SK细胞);293细胞:转染腺病毒E1A基因的人肾上皮细胞系;SK细胞:人类神经母细胞瘤细胞株; (1) Cell recovery, culture, passage (293 cells and SK cells); 293 cells: human renal epithelial cell line transfected with adenovirus E1A gene; SK cells: human neuroblastoma cell line;
(2)细胞种板(六孔板,每孔3×105个); (2) Cell seed plate (six-well plate, 3×10 5 per well);
(3)细胞株总RNA提取(Trizol法); (3) Extraction of total RNA from cell lines (Trizol method);
(4)逆转录反应(茎环逆转录stem-loop),引物为 (4) Reverse transcription reaction (stem-loop reverse transcription stem-loop), the primer is
5’-GTCGTATCCAGTGCTGGGTCCGAGTGATTCGCACTGGATACGACTCACCA-3’; 5'-GTCGTATCCAGTGCTGGGTCCGAGTGATTCGCACTGGATACGACTCACCA-3';
(5)实时荧光定量PCR(Taqman)探针PCR技术,检测miR-302a的表达量,正常细胞计为1,使用的探针序列为: (5) Real-time fluorescent quantitative PCR (Taqman) probe PCR technology to detect the expression level of miR-302a, the normal cell count is 1, and the probe sequence used is:
5'-FAM-TCGTATCCAGTGCGAATCACTC-TAMRA-3' 5'-FAM-TCGTATCCAGTGCGAATCACTC-TAMRA-3'
(6)数据统计和分析。 (6) Data statistics and analysis. the
2、实验结果 2. Experimental results
实验结果如图1和表1所示: The experimental results are shown in Figure 1 and Table 1:
表1 miR-302a在293细胞和SK细胞中的表达情况 Table 1 The expression of miR-302a in 293 cells and SK cells
从实验结果可以看出,肿瘤细胞中miR-302a的表达水平显著低于正常细胞。实验说明,通过检测miR-302a的表达情况,可以筛查细胞是否为肿瘤细胞。 It can be seen from the experimental results that the expression level of miR-302a in tumor cells is significantly lower than that in normal cells. The experiment shows that by detecting the expression of miR-302a, it is possible to screen whether the cells are tumor cells. the
实施例2 构建包含本发明核苷酸序列的重组慢病毒 Example 2 Construction of a recombinant lentivirus comprising the nucleotide sequence of the present invention
一、实验材料描述1. Description of experimental materials
细胞株:293T,慢病毒的包装细胞,为贴壁依赖型成上皮样细胞,生长培养基为DMEM(含10%FBS)。贴壁细胞经培养生长增殖形成单层细胞。 Cell line: 293T, a lentivirus packaging cell, is an anchorage-dependent epithelioid cell, and the growth medium is DMEM (containing 10% FBS). Adherent cells grow and proliferate in culture to form a monolayer of cells. the
菌株:大肠杆菌菌株DH5α。用于扩增慢病毒载体和辅助包装载体质粒。 Strain: E. coli strain DH5α. For amplification of lentiviral vectors and helper packaging vector plasmids. the
病毒载体:a)pGC-LV重组载体;b)pHelper1.0;c)pHelper2.0 Viral vector: a) pGC-LV recombinant vector; b) pHelper1.0; c) pHelper2.0
DNA溶液的制备:以Qiagen公司的质粒抽提试剂盒提取慢病毒包装系统中三种质粒DNA,质粒DNA溶于除菌的TE中,以紫外光吸收法测定其浓度及纯度,保证所提质粒DNA的A260/A280在1.8~2.0之间。 Preparation of DNA solution: Extract the three plasmid DNAs in the lentiviral packaging system with Qiagen’s plasmid extraction kit, dissolve the plasmid DNA in sterilized TE, and measure its concentration and purity by ultraviolet light absorption to ensure that the extracted plasmid The A260/A280 of DNA is between 1.8 and 2.0. the
主要试剂: Main reagents:
主要仪器: Main instrument:
二、质粒构建2. Plasmid construction
如图2所示,从含有目的基因的质粒中,利用PCR方法钓取目的基因,将目的载体进行酶切,酶切产物电泳回收后进行交换,其产物转化细菌感受态细胞。对长出的克隆先进行菌落PCR鉴定,再对PCR鉴定阳性的克隆进行测序和比对分析,比对正确的即为构建成功的目的质粒。 As shown in Figure 2, from the plasmid containing the target gene, the target gene was fished out by PCR method, the target vector was digested, and the digested product was recovered by electrophoresis and exchanged, and the product was transformed into bacterial competent cells. Colony PCR identification was performed on the grown clones first, and then the clones with positive PCR identification were sequenced and compared and analyzed. The correct comparison was the successful construction of the target plasmid. the
1、基因信息 1. Gene information
化学合成的目的基因序列microR-302s(miR-302s): Chemically synthesized target gene sequence microR-302s (miR-302s):
ACCGGTCCACCACTTAAACGTGGATGTACTTGCTTTGAAACTAAAGAAGTAAGTGCTTCCATGTTTTGGTGATGGAGATCTGCTCCCTTCAACTTTAACATGGAAGTGCTTTCTGTGACTTTAAAAGTAAGTGCTTCCATGTTTT AGTAGGAGTCATATGCCTTTGCTTTAACATGGGGGTACCTGCTGTGTGAAACAAAAGTAAGTGCTTCCATGTTTCAGTGGAGGTCTAGACCTCTACTTTAACATGGAGGCACTTGCTGTGACATGACAAAAATAAGTGCTTCCATGTTTGAGTGTGGGCTAGC ACCGGT CCACCACTTAAACGTGGATGTACTTGCTTTGAAACTAAAGAAGTAAGTGCTTCCATGTTTTGGTGATGGAGATCTGCTCCCTTCAACTTTAACATGGAAGTGCTTTCTGTGACTTTAAAAGTAAGTGCTTCCATGTTTT AGTAGGAGTCATATGCCTTTGCTTTAACATGGGGGTACCTGCTGTGTGAAACAAAAGTAAGTGCTTCCATGTTTCAGTGGAGGTCTAGACCTCTACTTTAACATGGAGGCACTTGCTGTGACATGACAAAAATAAGTGCTTCCATGTTTGAGTGTGG GCTAGC
说明:5’端下划线为Age I酶切位点,3’端下划线为NheI酶切位点。 Note: The 5' end is underlined for the Age I restriction site, and the 3' end is underlined for the NheI restriction site. the
2、工具载体: 2. Tool carrier:
载体名称:GV266 Carrier name: GV266
元件顺序:Ubi-MCS-IRES-puromycin Component order: Ubi-MCS-IRES-puromycin
克隆位点:AgeI/NheI Cloning site: AgeI/NheI
载体图谱如图3所示:http://www.genechem.com.cn/Zaiti.aspx?zt=GV266可下载载体说明书。 The carrier map is shown in Figure 3: http://www.genechem.com.cn/Zaiti.aspx? zt=GV266 can download the instruction manual of the carrier. the
3、重组质粒的构建 3. Construction of recombinant plasmids
3.1PCR产物交换入线性化表达载体 3.1 Exchange of PCR products into linearized expression vectors
反应条件: Reaction conditions:
25℃30分钟→42℃15分钟 30 minutes at 25°C → 15 minutes at 42°C
反应体系: reaction system:
说明: illustrate:
a)加入的线性化载体DNA和纯化的PCR产物的摩尔数比例为:1:3~1:9之间 a) The molar ratio of the added linearized carrier DNA to the purified PCR product is between 1:3 and 1:9
b)阳性对照加入的纯化的PCR产物为GAPDH基因(同样带有交换臂) b) The purified PCR product added to the positive control is the GAPDH gene (also with an exchange arm)
3.2制备感受态细胞: 3.2 Preparation of competent cells:
配置下述溶液: Configure the following solutions:
1)0.1M CaCl2溶液,以0.22μm过滤除菌。 1) 0.1M CaCl 2 solution, sterilized by 0.22μm filter.
2)250mM KCl溶液。 2) 250mM KCl solution. the
3)2M MgCl2溶液,高压灭菌。 3) 2M MgCl 2 solution, autoclaved.
4)SOB:1ml250mM KCl溶液加入100ml LB,以5M NaOH调PH值至7.0,高压灭菌,临用前加入0.5ml2M MgCl2溶液。 4) SOB: add 100ml LB to 1ml of 250mM KCl solution, adjust the pH value to 7.0 with 5M NaOH, autoclave, add 0.5ml of 2M MgCl 2 solution before use.
用氯化钙制备新鲜的大肠杆菌感受态细胞 Preparation of fresh E. coli competent cells with calcium chloride
1)从于37℃培养16小时的新鲜平板中挑取一个单菌落,转到一个含有100ml LB培养基的1L烧瓶中。于37℃剧烈振摇培养3小时(旋转摇床,300转/分)。 1) Pick a single colony from a fresh plate cultured at 37°C for 16 hours and transfer to a 1L flask containing 100ml LB medium. Incubate vigorously at 37° C. for 3 hours (rotary shaker, 300 rpm). the
2)在无菌条件下将细菌转移到一个无菌、一次性使用的、用冰预冷的50ml聚丙烯管中,在冰上放置10分钟,使培养物冷却至0℃。 2) Aseptically transfer the bacteria to a sterile, single-use, ice-precooled 50ml polypropylene tube, place on ice for 10 minutes to cool the culture to 0°C. the
3)于4℃以4000转/分离心10分钟,回收细胞。 3) Centrifuge at 4000 rpm for 10 minutes at 4°C to recover the cells. the
4)倒出培养液,将管倒置1分钟,使最后残留的痕量培养液流尽。 4) Pour out the culture medium and invert the tube for 1 minute to drain the last remaining trace of the culture medium. the
5)以10ml用冰预冷的0.1mol/L CaCl2重悬每份沉淀,放置于冰浴上。 5) Resuspend each pellet in 10ml of ice-cooled 0.1mol/L CaCl2 and place on an ice bath. the
6)于4℃,以4000转/分离心10分钟,回收细胞。 6) Centrifuge at 4000 rpm for 10 minutes at 4°C to recover the cells. the
7)倒出培养液,将管倒置1分钟,使最后残留的痕量培养液流尽。 7) Pour out the culture medium and invert the tube for 1 minute to drain the last remaining trace of the culture medium. the
8)每50ml初始培养物用2ml用冰预冷的0.1mol/L CaCl2重悬每份细胞沉淀。 8) Resuspend each cell pellet with 2 ml of ice-cold 0.1 mol/L CaCl 2 per 50 ml of initial culture.
9)将细胞分装成小份,放于-70℃冻存。 9) Divide the cells into small portions and freeze them at -70°C. the
(感受态细胞制备参考:分子克隆实验指南第二版55页) (Reference for Competent Cell Preparation: Molecular Cloning Experiment Guide, Second Edition, page 55)
3.3转化: 3.3 Conversion:
1)用冷却的无菌吸头从每种感受态细胞悬液中各取200μL转移到无菌的微量离心管中,每管加10μL连接液,轻轻旋转以混匀内容物,在冰中放置30分钟。 1) Use a cooled sterile tip to transfer 200 μL of each competent cell suspension to a sterile microcentrifuge tube, add 10 μL of connection solution to each tube, swirl gently to mix the contents, and store in ice Leave for 30 minutes. the
2)将管放到预加温到42℃的循环水浴中放好的EP管架上,恰恰放置90秒,不要摇动EP管架。 2) Put the tube on the EP tube rack placed in the circulating water bath preheated to 42°C, and place it for exactly 90 seconds without shaking the EP tube rack. the
3)快速将管转移到冰浴中,使细胞冷却l—2分钟。 3) Quickly transfer the tube to an ice bath to cool the cells for 1-2 minutes. the
4)每管加800μL LB培养基。用水浴将培养基加温至37℃,然后将管转移到37℃摇床上,温育45分钟使细菌复苏。 4) Add 800 μL LB medium to each tube. Warm the medium to 37°C with a water bath, then transfer the tube to a 37°C shaker and incubate for 45 minutes to recover the bacteria. the
5)将150μL已转化的感受态细胞转移到AMP抗性(100ug/ml)的LB琼脂培养基上。 5) Transfer 150 μL of transformed competent cells to AMP-resistant (100 ug/ml) LB agar medium. the
6)将平板置于室温直至液体被吸收。 6) Leave the plate at room temperature until the liquid is absorbed. the
7)倒置平皿,于37℃培养,16小时。 7) Invert the plate and incubate at 37°C for 16 hours. the
8)长出的克隆进行后续PCR鉴定。 8) Subsequent PCR identification of the grown clones. the
(转化操作参考:分子克隆实验指南第二版55-56页) (Reference for transformation operation: Molecular Cloning Experiment Guide, Second Edition, pages 55-56)
3.4阳性克隆的PCR鉴定 3.4 PCR identification of positive clones
载体酶切 vector digestion
用AgeI/NheI酶切化学合成的含有目的基因的质粒: Use AgeI/NheI to digest the chemically synthesized plasmid containing the gene of interest:
酶切反应体系: Enzyme digestion reaction system:
将上述混合的反应物置于37℃,2h。 The above mixed reactants were placed at 37°C for 2h. the
酶切片段大小:296bp,片段酶切电泳结果如图4所示。 Digestion fragment size: 296bp, the fragment digestion electrophoresis results are shown in Figure 4. the
3.5PCR鉴定重组克隆 3.5 PCR identification of recombinant clones
PCR反应体系: PCR reaction system:
PCR反应条件: PCR reaction conditions:
94℃3min 94℃3min
94℃30sec 94℃30sec
60℃30sec 60℃30sec
72℃30sec 72℃30sec
72℃5min 72℃5min
4℃∞ 4℃∞
PCR结果如图5所示,阳性转化子PCR产物大小:503bp,阴性转化子PCR产物大小:282bp。 The PCR results are shown in Figure 5, the size of the PCR product of the positive transformant: 503bp, and the size of the PCR product of the negative transformant: 282bp. the
阳性克隆测序图谱如图6所示,测序结果如下: The positive clone sequencing pattern is shown in Figure 6, and the sequencing results are as follows:
AATTCTGGCCGTTTTTGGCTTTTTTGTTAGACGAAGCTTGGGCTGCAGGTCGACTCTAGAGGATCCCCGGGTACCGGTCCACCACTTAAACGTGGATGTACTTGCTTTGAAACTAAAGAAGTAAGTGCTTCCATGTTTTGGTGATGGAGATCTGCTCCCTTCAACTTTAACATGGAAGTGCTTTCTGTGACTTTAAAAGTAAGTGCTTCCATGTTTTAGTAGGAGTCATATGCCTTTGCTTTAACATGGGGGTACCTGCTGTGTGAAACAAAAGTAAGTGCTTCCATGTTTCAGTGGAGGTCTAGACCTCTACTTTAACATGGAGGCACTTGCTGTGACATGACAAAAATAAGTGCTTCCATGTTTGAGTGTGGGCTAGCTAAGCCCCTCTCCCTCCCCCCCCCCTAACGTTACTGGCCGAAGCCGCTTGGAATAAGGCCGGTGTGCGTTTGTCTATATGTTATTTTCCACCATATTGCCGTCTTTTGGCAATGTGAGGGCCCGGAAACCTGGCCCTGTCTTCTTGACGAGCATTCCTAGGGGTCTTTCCCCTCTCGCCAAAGGAATGCAAGGTCTGTTGAATGTCGTGAAGGAAGCAGTTCCTCTGGAAGCTTCTTGAAGACAAACAACGTCTGTAGCGACCCTTTGCAGGCAGCGGAACCCCCCACCTGGCGACAGGTGCCTCTGCGGCCAAAAGCCACGTGTATAAGATACACCTGCAAAGGCGGCACAACCCCAGTGCCACGTTGTGAGTTGGATAGTTGTGGAAAGAGTCAAATGGCTCTCCTCAAGCGTATTCAACAAGGGGCTGATGATGCCCAGAAAGTACCCCATTGTATGGGATCTGATCTGGGGCCTCGGTACACATGCTTTACATGTGTTTAGTCGAGGTTAAAAAACGTCTAGCCCCCCGAACCACGGGACGTGCTTTCCTTTGAAAAACACGATGATATATGGCACAGTTACATGACCGAGTACAGCCACGGTGCGCCTCGCACCCGCGACGACATCCCAAGGGCGTAGCACCCTCGCGCCGCGTTGCCGACATACCCGCCCAGCCCAACGTCGATCGAACGCCCAATAAGTACCTGACTGCGAATCTTTCACGCTCGCTCGACTCGCAAGTGTTCGACCACGTCACGTGCACTGGTACTCGCAG AATTCTGGCCGTTTTTGGCTTTTTTGTTAGACGAAGCTTGGGCTGCAGGTCGACTCTAGAGGATCCCCGGGTACCGGTCCACCACTTAAACGTGGATGTACTTGCTTTGAAACTAAAGAAGTAAGTGCTTCCATGTTTTGGTGATGGAGATCTGCTCCCTTCAACTTTAACATGGAAGTGCTTTCTGTGACTTTAAAAGTAAGTGCTTCCATGTTTTAGTAGGAGTCATATGCCTTTGCTTTAACATGGGGGTACCTGCTGTGTGAAACAAAAGTAAGTGCTTCCATGTTTCAGTGGAGGTCTAGACCTCTACTTTAACATGGAGGCACTTGCTGTGACATGACAAAAATAAGTGCTTCCATGTTTGAGTGTGGGCTAGCTAAGCCCCTCTCCCTCCCCCCCCCCTAACGTTACTGGCCGAAGCCGCTTGGAATAAGGCCGGTGTGCGTTTGTCTATATGTTATTTTCCACCATATTGCCGTCTTTTGGCAATGTGAGGGCCCGGAAACCTGGCCCTGTCTTCTTGACGAGCATTCCTAGGGGTCTTTCCCCTCTCGCCAAAGGAATGCAAGGTCTGTTGAATGTCGTGAAGGAAGCAGTTCCTCTGGAAGCTTCTTGAAGACAAACAACGTCTGTAGCGACCCTTTGCAGGCAGCGGAACCCCCCACCTGGCGACAGGTGCCTCTGCGGCCAAAAGCCACGTGTATAAGATACACCTGCAAAGGCGGCACAACCCCAGTGCCACGTTGTGAGTTGGATAGTTGTGGAAAGAGTCAAATGGCTCTCCTCAAGCGTATTCAACAAGGGGCTGATGATGCCCAGAAAGTACCCCATTGTATGGGATCTGATCTGGGGCCTCGGTACACATGCTTTACATGTGTTTAGTCGAGGTTAAAAAACGTCTAGCCCCCCGAACCACGGGACGTGCTTTCCTTTGAAAAACACGATGATATATGGCACAGTTACATGACCGAGTACAGCCACGGTGCGCCTCGCACCC GCGACGACATCCCAAGGGCGTAGCACCCTCGCGCCGCGTTGCCGACATACCCGCCCAGCCCAACGTCGATCGAACGCCCAATAAGTACCTGACTGCGAATCTTTCACGCTCGCTCGACTCGCAAGTGTTCGACCACGTCACGTGCACTGGTACTCGCAG
上述黑体部分即目的基因,实验结果说明,本发明成功地构建了包含目的基因microR-302s的重组GV266载体,其是一种pGC-LV重组载体,可用于慢病毒包装。The part in bold above is the target gene. The experimental results show that the present invention successfully constructed the recombinant GV266 vector containing the target gene microR-302s, which is a pGC-LV recombinant vector and can be used for lentivirus packaging.
三、慢病毒包装3. Lentiviral packaging
(一)、病毒包装细胞293T的培养 (1), the cultivation of virus packaging cell 293T
活细胞计数 live cell count
用无血清培养基把细胞悬液稀释到200~2000个/ml(一般稀释倍数为100倍),在0.1ml的细胞悬液中加入0.1ml的0.4%的台盼兰溶液。轻轻混匀,数分钟后,用血球计数板计数细胞。活细胞排斥台盼兰,因而染成蓝色的细胞是死细胞。 Dilute the cell suspension to 200-2000 cells/ml with serum-free medium (generally, the dilution factor is 100 times), and add 0.1 ml of 0.4% trypan blue solution to 0.1 ml of the cell suspension. Mix gently, and after a few minutes, count the cells with a hemocytometer. Live cells reject trypan blue, so cells that stain blue are dead cells. the
细胞株的冻存 Cryopreservation of cell lines
1.取培养2~3天生长旺盛的细胞,用细胞培养液将细胞配成2×106~2×107/ml。 1. Take the vigorously growing cells after culture for 2-3 days, and make the cells into 2×10 6 ~2×10 7 /ml with cell culture medium.
2.在1ml细胞冻存管中加入0.5ml细胞悬液,0.4ml小牛血清和0.1ml二甲基亚砜(或甘油),混匀后密封。置4℃1小时,-20℃2小时,然后直接放入液氮中或置液氮蒸汽上过夜后浸入液氮中。 2. Add 0.5ml cell suspension, 0.4ml calf serum and 0.1ml dimethyl sulfoxide (or glycerol) to a 1ml cell cryopreservation tube, mix well and seal. Put it at 4°C for 1 hour, and -20°C for 2 hours, then put it directly into liquid nitrogen or put it on the liquid nitrogen vapor overnight and then immerse it in liquid nitrogen. the
细胞复苏 Cell recovery
1.从液氮罐中取出细胞冻存管,应带有防护眼睛和手套。 1. Take out the cell cryopreservation tube from the liquid nitrogen tank, and wear protective eyes and gloves. the
2.迅速放入盛有37℃水的水浴中,并不时摇动,尽快解冻。 2. Quickly put it into a water bath filled with 37°C water, and shake it from time to time to thaw as soon as possible. the
3.用70%酒精擦拭消毒后,移至净化台上,吸出细胞悬液至培养瓶中,补加3ml含10%FBS的DMEM培养基,置温箱培养。 3. After wiping and disinfecting with 70% alcohol, move it to a clean bench, suck out the cell suspension into a culture bottle, add 3ml of DMEM medium containing 10% FBS, and culture in an incubator. the
4.次日更换一次培养液后再继续培养。 4. Change the culture medium the next day before continuing the culture. the
细胞传代 cell inheritance
1.弃去旧培养液,加入5ml灭菌PBS溶液,轻轻晃动,洗涤细胞生长面,然后弃去PBS溶液。 1. Discard the old culture medium, add 5ml sterilized PBS solution, shake gently, wash the cell growth surface, and then discard the PBS solution. the
2.加入2ml胰酶消化液,消化1-2min直到细胞完全消化下来。 2. Add 2ml of trypsin digestion solution and digest for 1-2min until the cells are completely digested. the
3.加入含10%胎牛血清和100U/ml双抗的DMEM培养基5ml,用刻度吸管吹打数次,将瓶壁上的细胞冲洗下来。 3. Add 5ml of DMEM medium containing 10% fetal bovine serum and 100U/ml double antibody, and blow it several times with a graduated pipette to wash down the cells on the bottle wall. the
4.混匀细胞后分至两个新的培养瓶中,继续培养。 4. After mixing the cells, divide them into two new culture flasks and continue to culture. the
(二)、慢病毒包装 (2) Lentiviral packaging
细胞转染 cell transfection
1)转染前24h,用胰蛋白酶消化对数生长期的293T细胞,以含10%血清的培养基调整细胞密度为1.2x107细胞/20ml,重新接种于15cm细胞培养皿,37℃、5%CO2培养箱内培养。24h待细胞密度达70%~80%时即可用于转染。细胞状态对于病毒包装至关重要,因此需要保证良好的细胞状态和较少的传代次数。 1) 24 hours before transfection, digest the 293T cells in the logarithmic growth phase with trypsin, adjust the cell density to 1.2x107 cells/20ml with the medium containing 10% serum, and re-seek in a 15cm cell culture dish, 37°C, 5 Cultured in a %CO 2 incubator. After 24 hours, when the cell density reaches 70%-80%, it can be used for transfection. Cell state is critical for virus packaging, so good cell state and low passage times need to be guaranteed.
2)转染前2h将细胞培养基更换为无血清培养基。 2) The cell culture medium was replaced with serum-free medium 2 hours before transfection. the
3)向一灭菌离心管中加入所制备的各DNA溶液(重组pGC-LV载体(即步骤二制备的重组GV266载体)20μg,pHelper1.0载体15μg,pHelper2.0载体10μg),与相应体积的Opti-MEM混合均匀,调整总体积为2.5ml,在室温下温育5分钟。 3) Add the prepared DNA solutions (recombinant pGC-LV vector (recombinant GV266 vector prepared in step 2) 20 μg, pHelper1.0 vector 15 μg, pHelper2.0 vector 10 μg) to a sterilized centrifuge tube, and the corresponding volume Mix Opti-MEM evenly, adjust the total volume to 2.5ml, and incubate at room temperature for 5 minutes. the
4)将Lipofectamine2000试剂轻柔摇匀,取100μl Lipofectamine2000试剂在另一管中与2.4ml Opti-MEM混合,在室温下温育5分钟。 4) Shake the Lipofectamine2000 reagent gently, take 100μl Lipofectamine2000 reagent and mix it with 2.4ml Opti-MEM in another tube, and incubate at room temperature for 5 minutes. the
5)把稀释后的DNA与稀释后的Lipofectamine2000进行混合,轻轻地颠倒混匀,不要振荡。必须在5分钟之内混合。 5) Mix the diluted DNA with the diluted Lipofectamine2000, and gently invert to mix without shaking. Must be mixed within 5 minutes. the
6)混合后,在室温下温育20分钟,以便形成DNA与Lipofectamine2000稀释液的转染复合物。 6) After mixing, incubate at room temperature for 20 minutes to form a transfection complex of DNA and Lipofectamine2000 dilution. the
7)将DNA与Lipofectamine2000混合液转移至293T细胞的培养液中, 混匀,于37℃,5%CO2细胞培养箱中培养。 7) Transfer the mixture of DNA and Lipofectamine2000 to the culture medium of 293T cells, mix well, and culture at 37° C., 5% CO 2 cell incubator.
8)培养8h后倒去含有转染混和物的培养基,每瓶细胞加入20ml的PBS液,10)轻轻左右晃动一下培养瓶以洗涤残余的转染混和物,然后倒去。 8) Pour off the medium containing the transfection mixture after culturing for 8 hours, add 20ml of PBS solution to each bottle of cells, 10) gently shake the culture bottle left and right to wash the remaining transfection mixture, and then pour it out. the
9)每瓶细胞中加入含10%血清的细胞培养基25ml,于37℃、5%CO2培养箱内继续培养48小时。 9) Add 25 ml of cell culture medium containing 10% serum to each bottle of cells, and continue culturing for 48 hours in a 37° C., 5% CO2 incubator. the
感染图片如图7~11所示。 Infection pictures are shown in Figures 7-11. the
(三)病毒的收获及浓缩 (3) Virus harvest and concentration
1.收集转染后48小时(转染即可为0小时计起)的293T细胞上清液。 1. Collect the 293T cell supernatant 48 hours after transfection (transfection can be counted from 0 hours). the
2.于4℃,4000g离心10min,除去细胞碎片。 2. Centrifuge at 4000g for 10min at 4°C to remove cell debris. the
3.以0.45μm滤器过滤上清液于40ml超速离心管中。 3. Filter the supernatant with a 0.45 μm filter into a 40 ml ultracentrifuge tube. the
4.把病毒粗提液样品加入到过滤杯中(最多19ml),盖上盖子。将过滤杯插到滤过液收集管中。 4. Add the virus crude extract sample to the filter cup (up to 19ml) and cover with the lid. Insert the filter cup into the filtrate collection tube. the
5.组合好后,做好平衡,放在转头上。 5. After the combination is complete, balance it and place it on the rotor. the
6.在4000×g离心,至需要的病毒浓缩体积。通常需要的时间为10-15分钟。 6. Centrifuge at 4000×g to the desired virus concentration volume. Usually takes 10-15 minutes. the
7.离心结束后,取出离心装置,将过滤杯和下面的滤过液收集杯分开。 7. After centrifugation, take out the centrifuge device and separate the filter cup from the filtrate collection cup below. the
8.将过滤杯倒扣在样品收集杯上。 8. Invert the filter cup onto the sample collection cup. the
9.离心力不超过1000g,时间为2分钟。过高转速会导致样品损失。把过滤杯从样品收集杯上移开。样品收集杯中的即为病毒浓缩液。 9. The centrifugal force does not exceed 1000g, and the time is 2 minutes. Excessively high rotational speeds can result in sample loss. Remove the filter cup from the sample collection cup. The virus concentrate is in the sample collection cup. the
10.将病毒浓缩液移出,分装后保存在病毒管中,-80度长期保存。取其中一支进行病毒生物学滴度测定。 10. Remove the virus concentrate, store in virus tubes after aliquoting, and store at -80 degrees for a long time. One of them was taken for virus biological titer determination. the
(四)滴度测定 (4) Titer determination
样品制备 Sample Preparation
1.检测前一天,对293T细胞传代,每个24孔中加1×105个细胞,体积为500μl; 1. On the day before the test, subculture the 293T cells, add 1× 105 cells to each 24-well, the volume is 500 μl;
2.次日,准备7~10个无菌的Ep管,在每个管中加入90μl的培养基(DMEM+10%FBS); 2. The next day, prepare 7-10 sterile Ep tubes, and add 90 μl of medium (DMEM+10% FBS) to each tube;
3.取待测定的病毒原液10μl加入到第一个管中,混匀后,取10μl加入到第二个管中。继续相同的操作直到最后一管; 3. Take 10 μl of the virus stock solution to be tested and add it to the first tube. After mixing, take 10 μl and add it to the second tube. Continue the same operation until the last tube;
4.选取所需的细胞孔,吸去90μl培养基。加入稀释好的病毒溶液。放入37℃,5%CO2培养箱中培养; 4. Select the desired cell wells and suck out 90 μl of medium. Add the diluted virus solution. Place in a 37°C, 5% CO2 incubator for cultivation;
5.24小时后,加入新鲜培养基500μl。小心操作,不要吹起细胞,维持细胞正常生长; 5. After 24 hours, add 500 μl of fresh medium. Operate carefully, do not blow up the cells, and maintain the normal growth of cells;
6.4天后,抽提RNA准备做RT-qPCR。 After 6.4 days, extract RNA and prepare for RT-qPCR. the
说明: illustrate:
第一个Ep管中加入10μl病毒原液,记为1E+1μl; Add 10 μl of virus stock solution to the first Ep tube, recorded as 1E+1 μl;
第二个Ep管中进行了第一次十倍稀释,所得病毒原液为第一个Ep管中的1/10,记为1E+0μl; The first ten-fold dilution was carried out in the second Ep tube, and the obtained virus stock solution was 1/10 of that in the first Ep tube, which was recorded as 1E+0μl;
第三个Ep管中进行了第二次十倍稀释,所得病毒原液为第二个Ep管中的1/10,记为1E-1μl; The second ten-fold dilution was carried out in the third Ep tube, and the obtained virus stock solution was 1/10 of that in the second Ep tube, which was recorded as 1E-1μl;
依次类推… And so on…
第七个Ep管中进行了第六次十倍稀释,所得病毒原液为第六个Ep管中的1/10,记为1E-5μl; The sixth ten-fold dilution was carried out in the seventh Ep tube, and the obtained virus stock solution was 1/10 of that in the sixth Ep tube, which was recorded as 1E-5 μl;
总RNA抽提 Total RNA Extraction
说明:根据Invitrogen公司的TRIZOL操作说明书进行,均为RNase-free操作。 Note: According to Invitrogen's TRIZOL operation manual, all operations are RNase-free. the
1.去细胞上清,每孔加入1mlTRIZOL吹打,室温静置5min,后转移至另一新的1.5ml eppendorf管中。 1. Remove the cell supernatant, add 1ml TRIZOL to each well, pipette, let stand at room temperature for 5min, and then transfer to another new 1.5ml eppendorf tube. the
2.每管加入200μl氯仿,用力震荡15s,室温静置15min。 2. Add 200 μl chloroform to each tube, shake vigorously for 15 seconds, and let stand at room temperature for 15 minutes. the
3.4℃,12000rpm,离心15min。 3.4°C, 12000rpm, centrifuge for 15min. the
4.从每管中吸取上清至另一新的1.5ml eppendorf管。加入等体积-20℃预冷的异丙醇,混匀后-20℃沉淀10min。 4. Pipette the supernatant from each tube into another new 1.5ml eppendorf tube. Add an equal volume of isopropanol pre-cooled at -20°C, mix well and precipitate at -20°C for 10 minutes. the
5.4℃,12000rpm离心10min后,去上清。 After centrifugation at 5.4°C and 12000rpm for 10min, the supernatant was removed. the
6.加入至少1ml4℃预冷的75%乙醇,洗涤沉淀及离心管壁。 6. Add at least 1ml of 75% ethanol pre-cooled at 4°C to wash the precipitate and the wall of the centrifuge tube. the
7.4℃,10000rpm离心5min,弃上清。 Centrifuge at 10,000 rpm for 5 minutes at 7.4°C, and discard the supernatant. the
8.4℃,10000rpm再次离心5min,吸去残液,室温干燥(不需完全干燥)。 8.4°C, centrifuge again at 10,000 rpm for 5 minutes, suck off the residual liquid, and dry at room temperature (complete drying is not required). the
9.加入20μlRNase-free水,至完全溶解,紫外分析测定所抽提RNA的浓度。 9. Add 20 μl RNase-free water until completely dissolved, and measure the concentration of the extracted RNA by UV analysis. the
RNA逆转录获cDNA RNA reverse transcription to obtain cDNA
M-MLV逆转录酶和dNTP购自PROMEGA公司。Oligo dT购自上海生工。RNase-free的物品都购自Axygen。 M-MLV reverse transcriptase and dNTP were purchased from PROMEGA Company. Oligo dT was purchased from Shanghai Shenggong. RNase-free items were purchased from Axygen. the
说明:根据Promega公司的M-MLV操作说明书进行,均为RNase-free操作。 Explanation: According to the M-MLV operation manual of Promega Company, all operations are RNase-free. the
Protocol: Protocol:
1.将1μl Oligo dT(0.5μg/μl)和2.0μg Total RNA加入到PCR小管中,补充DEPC-H2O至9μl。混匀后离心,70℃温浴10min。之后立即插入到0℃冰水浴中,使Oligo dT和模板退火。 1. Add 1 μl Oligo dT (0.5 μg/μl) and 2.0 μg Total RNA to a small PCR tube, and add DEPC-H2O to 9 μl. After mixing, centrifuge and incubate at 70°C for 10 minutes. Immediately thereafter, insert into a 0°C ice-water bath to anneal the Oligo dT and template. the
2.按下表的比例,根据反应管数算出所需的试剂量。将M-MLV酶等在冰上混匀,得到RT反应液。 2. According to the ratio in the table below, calculate the required reagent volume according to the number of reaction tubes. Mix the M-MLV enzyme and the like on ice to obtain the RT reaction solution. the
3.在每个反应管中加入的11μl的RT反应液,混匀后离心。 3. Add 11μl of RT reaction solution to each reaction tube, mix well and centrifuge. the
在每个反应管中加入的11μl的RT反应液,混匀后离心。 Add 11μl of RT reaction solution into each reaction tube, mix well and centrifuge. the
Real-time PCR检测 Real-time PCR detection
Real-time PCR在TAKARA的TP800上完成。SYBR Master Mixture来自TAKARA. Real-time PCR was completed on TAKARA's TP800. SYBR Master Mixture comes from TAKARA.
1.按下列比例配置反应体系: 1. Configure the reaction system according to the following ratio:
2.设定程序为两步法Real-Time定量。预变性95℃,15S,之后每一步变性95℃,5S,退火延伸60℃,30S,共进行40个循环。每次在延伸阶段读取吸光值。 2. Set the program to two-step Real-Time quantification. Pre-denaturation at 95°C for 15S, followed by each step of denaturation at 95°C for 5S, annealing and extension at 60°C for 30S, for a total of 40 cycles. Read the absorbance each time during the extension phase. the
Cycle1:(1X) Cycle1:(1X)
Step1:95.0℃for00:15. Step1:95.0℃for00:15.
Cycle2:(40X) Cycle2:(40X)
Step1:95.0℃for00:05. Step1:95.0℃for00:05.
Step2:60.0℃for00:30. Step2:60.0℃for00:30.
Data collection and real-time analysis enabled. Data collection and real-time analysis enabled.
3.制作熔解曲线。PCR结束后,在95℃变性1min。然后冷却至55℃,使DNA双链充分结合。从55℃开始到95℃,每一步增加0.5℃,保持30S,同时读取吸光值。 3. Make a melting curve. After PCR, denature at 95°C for 1 min. Then cool to 55°C to fully bind the DNA double strands. From 55°C to 95°C, increase by 0.5°C in each step, keep for 30S, and read the absorbance value at the same time. the
Cycle3:(1X) Cycle3:(1X)
Step1:95.0℃for01:00. Step1:95.0℃for01:00.
Cycle4:(1X) Cycle4:(1X)
Step1:55.0℃for01:00. Step1:55.0℃for01:00.
Cycle5:(81X) Cycle5:(81X)
Step1:55.0℃-95.0℃for00:30. Step1:55.0℃-95.0℃for00:30.
Increase set point temperature after cycle2by0.5℃ Increase set point temperature after cycle2by0.5℃
病毒滴度检测结果如表2所示: The virus titer detection results are shown in Table 2:
表2 不同浓度病毒感染后样品组的Ct值及表达量分析 Table 2 Ct value and expression analysis of sample groups after different concentrations of virus infection
在本次滴度检测中,1.00E-04ul组样品和control组样品的Ct值存在3个左右差异,因此1.00E-04ul组样品中存在病毒颗粒。 In this titer test, there are about 3 differences in Ct values between the 1.00E-04ul group samples and the control group samples, so there are virus particles in the 1.00E-04ul group samples. the
假定该组样品含有至少有1个病毒颗粒,则病毒的滴度为: Assuming that the group of samples contains at least 1 virus particle, the titer of the virus is:
1/(1.00E-04)*20=2.00E+5TU/ul=2.00E+8TU/ml。 1/(1.00E-04)*20=2.00E+5TU/ul=2.00E+8TU/ml. the
实验结果说明,本发明成功地构建了慢病毒颗粒,其包含了目的基因microR-302s。 The experimental results show that the present invention successfully constructs lentiviral particles, which contain the target gene microR-302s. the
(五)包含microR-302s的质粒qPCR表达检测 (5) qPCR expression detection of plasmid containing microR-302s
1、总RNA抽提(根据Invitrogen公司的Trizol操作说明书进行) 1. Total RNA extraction (according to Invitrogen's Trizol operating instructions)
1)收集细胞,1000rpm离心5min,去上清,细胞沉淀中加入1ml Trizol,迅速吹打后室温静置5min,然后转移至新的1.5ml eppendorf管中 1) Collect the cells, centrifuge at 1000rpm for 5min, remove the supernatant, add 1ml Trizol to the cell pellet, pipette quickly and let stand at room temperature for 5min, then transfer to a new 1.5ml eppendorf tube
2)每管加入200μl氯仿,用手上下颠倒eppendorf管15s,室温静置10min 2) Add 200μl chloroform to each tube, turn the eppendorf tube upside down by hand for 15 seconds, and let it stand at room temperature for 10 minutes
3)4℃,12000rpm,离心15min 3) 4°C, 12000rpm, centrifuge for 15min
4)吸取上清移至新的1.5ml eppendorf管,加入等体积预冷的异丙醇,混匀后4℃沉淀10min 4) Transfer the supernatant to a new 1.5ml eppendorf tube, add an equal volume of pre-cooled isopropanol, mix well and precipitate at 4°C for 10min
5)4℃,12000rpm离心10min后,去上清 5) Centrifuge at 12000rpm for 10min at 4°C, remove the supernatant
6)加入至少1ml75%乙醇(用DEPC处理过的水新鲜配制),洗涤沉淀 6) Add at least 1ml of 75% ethanol (freshly prepared with DEPC-treated water) to wash the precipitate
7)4℃,10000rpm离心5min,弃去大部分上清 7) Centrifuge at 10,000 rpm for 5 minutes at 4°C, discard most of the supernatant
8)4℃,10000rpm再次离心5min,吸去上清 8) Centrifuge again at 10,000rpm at 4°C for 5min, and suck off the supernatant
9)室温干燥 9) Dry at room temperature
10)待RNA基本透明时,加入20μl RNase-free水,至完全溶解,紫外分析测定所抽提RNA的浓度。 10) When the RNA is basically transparent, add 20 μl RNase-free water until it is completely dissolved, and measure the concentration of the extracted RNA by UV analysis. the
2、RNA逆转录获得cDNA 2. RNA reverse transcription to obtain cDNA
(根据Promega公司的M-MLV操作说明书进行)M-MLV逆转录酶和dNTPs购自Promega公司,Oligo dT购自上海生工,RNase-free的物品都 购自Axygen,具体步骤如下: (According to Promega's M-MLV operating instructions) M-MLV reverse transcriptase and dNTPs were purchased from Promega, Oligo dT was purchased from Shanghai Sangong, and RNase-free items were purchased from Axygen. The specific steps are as follows:
1)将1μl Oligo dT(0.5μg/μl)和2.0μg Total RNA加入到PCR小管中,补充DEPC-H2O至9ul;混匀后离心,70℃温浴10min;之后立即置于0℃冰水混合物中冰浴,使OligodT和模板退火 1) Add 1μl Oligo dT (0.5μg/μl) and 2.0μg Total RNA to a small PCR tube, add DEPC-H 2 O to 9ul; mix well, centrifuge, and incubate at 70°C for 10min; immediately place in ice water at 0°C Ice bath in mixture to anneal OligodT and template
2)按下表的比例配制反应体系(冰上进行),混匀,短暂离心 2) Prepare the reaction system according to the ratio in the table below (on ice), mix well, and briefly centrifuge
注:dNTPs是dATP,dCTP,dGTP,dTTP的混合,浓度为10mM Note: dNTPs is a mixture of dATP, dCTP, dGTP, dTTP, the concentration is 10mM
3)上述体系在42℃反应1h,然后在70℃水浴锅中水浴10min使RT酶失活 3) The above system was reacted at 42°C for 1 hour, and then bathed in a water bath at 70°C for 10 minutes to inactivate the RT enzyme
4)将得到的RT产物--cDNA置于-80℃保存备用 4) Store the obtained RT product--cDNA at -80°C for future use
3、Real-time PCR检测 3. Real-time PCR detection
1)按下列比例配置反应体系: 1) Configure the reaction system according to the following ratio:
2)设定程序为两步法Real-Time PCR:预变性95℃,15S;之后每一步变性95℃,5S; 2) Set the program as two-step Real-Time PCR: pre-denaturation at 95°C, 15S; subsequent denaturation at 95°C, 5S for each step;
退火延伸60℃,30S;共进行45个循环。每次在延伸阶段读取吸光值 Annealing extension 60 ℃, 30S; a total of 45 cycles. Absorbance readings each time during the extension phase
Cycle1:(1X) Cycle1:(1X)
Step1:95.0℃for00:15. Step1:95.0℃for00:15.
Cycle2:(45X) Cycle2:(45X)
Step1:95.0℃for00:05. Step1:95.0℃for00:05.
Step2:60.0℃for00:30. Step2:60.0℃for00:30.
Data collection and real-time analysis enabled Data collection and real-time analysis enabled
3)制作熔解曲线:PCR结束后,95℃变性1min,然后冷却至55℃,使DNA双链充分结合。从55℃开始到95℃,每一步增加0.5℃,保持4S,同时读取吸光值 3) Make a melting curve: After PCR, denature at 95°C for 1 min, then cool to 55°C to fully bind the DNA double strands. From 55°C to 95°C, increase by 0.5°C in each step, keep for 4S, and read the absorbance value at the same time
Cycle3:(1X) Cycle3:(1X)
Step1:95.0℃for01:00. Step1:95.0℃for01:00.
Cycle4:(1X) Cycle4:(1X)
Step1:55.0℃for01:00. Step1:55.0℃for01:00.
Cycle5:(81X) Cycle5:(81X)
Step1:55.0℃-95.0℃for00:04. Step1:55.0℃-95.0℃for00:04.
Increase set point temperature after cycle2by0.5℃ Increase set point temperature after cycle2by0.5℃
定量PCR结果如表3~4和图12所示: Quantitative PCR results are shown in Table 3-4 and Figure 12:
表3 定量PCR结果 Table 3 Quantitative PCR results
说明:ΔCt=hsa-miR-302aCt值-U6Ct值 Explanation: ΔCt=hsa-miR-302aCt value-U6Ct value
-ΔΔCt=NC组ΔCt平均值-各样品ΔCt -ΔΔCt=average value of ΔCt in NC group-ΔCt of each sample
2-ΔΔCt反映各样品相对CON组样品hsa-miR-302a的相对表达水平 2-ΔΔCt reflects the relative expression level of hsa-miR-302a in each sample relative to the CON group samples
“—”代表由于目的基因在细胞中表达丰度太低,仪器没有读值 "—" means that the instrument has no reading value because the expression abundance of the target gene in the cell is too low
由于目的基因的低表达(Ct>31)导致复孔重复性不好是正常的 It is normal for duplicate wells to have poor repeatability due to low expression of the target gene (Ct>31)
表4 定量PCR统计结果 Table 4 Quantitative PCR statistical results
从定量PCR结果可以看出,与对照组相比,本发明构建的含有慢病毒的细胞中,miR-302a基因的表达水平是前者的23倍以上(P<0.05), As can be seen from the quantitative PCR results, compared with the control group, in the cells containing the lentivirus constructed by the present invention, the expression level of the miR-302a gene is more than 23 times that of the former (P<0.05),
从定量PCR结果可以看出,人293T细胞中,相对于对照组,本发明重组质粒的hsa-miR-302a,hsa-miR-302b,hsa-miR-302c,hsa-miR-302d基因的表达水平可以达到NC的23倍以上(P<0.05)。 As can be seen from the quantitative PCR results, in human 293T cells, relative to the control group, the expression levels of hsa-miR-302a, hsa-miR-302b, hsa-miR-302c, and hsa-miR-302d genes of the recombinant plasmid of the present invention It can reach more than 23 times of NC (P<0.05). the
(六)转染过表达microR-302s后SK-N-SH细胞中microR302s的表达检测 (6) Expression detection of microR302s in SK-N-SH cells after transfection and overexpression of microR-302s
1、实验方法 1. Experimental method
取步骤(三)构建的慢病毒感染SK-N-SH细胞,检测miR-302a在SK-目的病毒转染细胞和SK-目对照细胞的表达情况。 The lentivirus constructed in step (3) was used to infect SK-N-SH cells, and the expression of miR-302a in SK-target virus-transfected cells and SK-me control cells was detected. the
转染: Transfection:
预实验提示在最佳条件下(Eni.S Enhanced Infection Solution中(pH7.4)),达到80%的感染效率需要的MOI=10。 Preliminary experiments indicated that under optimal conditions (in Eni.S Enhanced Infection Solution (pH7.4)), MOI=10 is required to achieve 80% infection efficiency. the
转染步骤: Transfection steps:
1.实验前保证细胞的良好生长状态; 1. Ensure that the cells are in a good growth state before the experiment;
2.实验前一天接种2~3×105个细胞/孔于6孔培养板中,所加培养基体积为2ml,经24h培养,细胞进入对数生长期,贴壁生长良好,开始转染; 2. Inoculate 2-3× 105 cells/well in a 6-well culture plate the day before the experiment, add a medium volume of 2ml, after 24 hours of cultivation, the cells enter the logarithmic growth phase, adhere to the wall and grow well, and start transfection ;
3.实验当天,将细胞用温和PBS轻轻清洗2遍,加入转染增强液(Enhancement Solution吉凯公司提供),按照MOI=10的设计要求,稀释目的病毒,加入转染液,轻轻混匀;对照组加入空载病毒或空白转染液(病毒感染时细胞的融合率约为30~50%,密度为20~40%); 3. On the day of the experiment, gently wash the cells twice with mild PBS, add transfection enhancement solution (provided by Enhancement Solution Jikai Company), dilute the target virus according to the design requirements of MOI=10, add the transfection solution, and mix gently Uniformly; add empty virus or blank transfection solution to the control group (the fusion rate of the cells during virus infection is about 30-50%, and the density is 20-40%);
4.转染8-12h后,弃含病毒转染液,温和PBS轻轻清洗细胞2遍,换正常培养液; 4. After 8-12 hours of transfection, discard the virus transfection solution, gently wash the cells twice with mild PBS, and replace with normal culture medium;
5.培养至转染后24h,再次清洗细胞,更换新鲜正常培养液; 5. Culture until 24 hours after transfection, wash the cells again, and replace with fresh normal culture medium;
6;培养至转染后48h,72h,时间点,收取细胞,开展下游实验。一次实验需要32个孔(12个对照孔,20个目的孔,再各自分为两种感染条件)。病毒感染时细胞的融合率约为30~50%,密度为20~40%。 6. Cultivate until 48h and 72h after transfection, harvest the cells, and carry out downstream experiments. One experiment requires 32 wells (12 control wells, 20 purpose wells, each divided into two infection conditions). The fusion rate of cells during virus infection is about 30-50%, and the density is 20-40%. the
2、实验结果 2. Experimental results
实验结果如图13~17以及表5~8所示: The experimental results are shown in Figures 13-17 and Tables 5-8:
表5 qPCR检测转染48h后microRNA-302a表达情况 Table 5 qPCR detection of microRNA-302a expression 48h after transfection
[0332] [0332]
表6 qPCR检测转染48h后microRNA-302b表达情况 Table 6 qPCR detection of microRNA-302b expression 48h after transfection
表7 qPCR检测转染48h后microRNA-302c表达情况 Table 7 qPCR detection of microRNA-302c expression 48h after transfection
表8 qPCR检测转染48h后microRNA-302d表达情况 Table 8 qPCR detection of microRNA-302d expression 48h after transfection
实验结果说明,转染本发明慢病毒后,细胞中microRNA-302a、microRNA-302b、microRNA-302c、microRNA-302d表达水平提高,说明本 发明构建得到含有目的基因microR-302s的重组慢病毒。 The experimental results show that after transfection of the lentivirus of the present invention, the expression levels of microRNA-302a, microRNA-302b, microRNA-302c, and microRNA-302d in the cells are increased, indicating that the present invention has constructed a recombinant lentivirus containing the target gene microR-302s. the
实施例3 microR-302s对肿瘤细胞的影响实验 Example 3 Effect of microR-302s on tumor cells
1、实验方法 1. Experimental method
取实施例2构建的含有目的基因microR-302s的重组慢病毒感染SK-N-SH细胞(人神经母细胞瘤细胞株) The recombinant lentivirus containing the target gene microR-302s constructed in Example 2 was used to infect SK-N-SH cells (human neuroblastoma cell line)
(1)转染 (1) Transfection
预实验提示在最佳条件下(Eni.S Enhanced Infection Solution中(pH7.4)),达到80%的感染效率需要的MOI=10。 Preliminary experiments indicated that under optimal conditions (in Eni.S Enhanced Infection Solution (pH7.4)), MOI=10 is required to achieve 80% infection efficiency. the
转染步骤: Transfection steps:
1.实验前保证细胞的良好生长状态; 1. Ensure that the cells are in a good growth state before the experiment;
2.实验前一天接种2~3×105个细胞/孔于6孔培养板中,所加培养基体积为2ml,经24h培养,细胞进入对数生长期,贴壁生长良好,开始转染; 2. Inoculate 2-3× 105 cells/well in a 6-well culture plate the day before the experiment, add a medium volume of 2ml, after 24 hours of cultivation, the cells enter the logarithmic growth phase, adhere to the wall and grow well, and start transfection ;
3.实验当天,将细胞用温和PBS轻轻清洗2遍,加入转染增强液(Enhancement Solution吉凯公司提供),按照MOI=10的设计要求,稀释目的病毒,加入转染液,轻轻混匀;对照组加入空载病毒或空白转染液(病毒感染时细胞的融合率约为30~50%,密度为20~40%); 3. On the day of the experiment, gently wash the cells twice with mild PBS, add transfection enhancement solution (provided by Enhancement Solution Jikai Company), dilute the target virus according to the design requirements of MOI=10, add the transfection solution, and mix gently Uniformly; add empty virus or blank transfection solution to the control group (the fusion rate of the cells during virus infection is about 30-50%, and the density is 20-40%);
4.转染8-12h后,弃含病毒转染液,温和PBS轻轻清洗细胞2遍,换正常培养液; 4. After 8-12 hours of transfection, discard the virus transfection solution, gently wash the cells twice with mild PBS, and replace with normal culture medium;
5.培养至转染后24h,再次清洗细胞,更换新鲜正常培养液; 5. Culture until 24 hours after transfection, wash the cells again, and replace with fresh normal culture medium;
6;培养至转染后48h,72h,时间点,收取细胞,开展下游实验。一次实验需要32个孔(12个对照孔,20个目的孔,再各自分为两种感染条件)。病毒感染时细胞的融合率约为30~50%,密度为20~40%。 6. Cultivate until 48h and 72h after transfection, harvest the cells, and carry out downstream experiments. One experiment requires 32 wells (12 control wells, 20 purpose wells, each divided into two infection conditions). The fusion rate of cells during virus infection is about 30-50%, and the density is 20-40%. the
(2)Hoechst33342染色 (2) Hoechst33342 staining
加入适当量Hoechst33342染色液,必须充分覆盖住待染色的样品; Add an appropriate amount of Hoechst33342 staining solution, which must fully cover the sample to be stained;
在适宜于细胞培养的温度培养20-30分钟; Incubate at a temperature suitable for cell culture for 20-30 minutes;
弃染色液,用PBS或培养液洗涤2-3次即可进行荧光检测。 Discard the staining solution, wash with PBS or culture medium for 2-3 times to perform fluorescence detection. the
(3)流式细胞仪检测 (3) Flow cytometry detection
本实验采用BD公司ANNEXIN V-FITC凋亡试剂盒,包括(ANNEXIN V-FITC和PI10X Binding Buffer缓冲液),本实验可以将早期凋亡,晚期凋亡和死亡细胞区分开来。 In this experiment, ANNEXIN V-FITC Apoptosis Kit from BD Company was used, including (ANNEXIN V-FITC and PI10X Binding Buffer). This experiment can distinguish early apoptosis, late apoptosis and dead cells. the
1.消化细胞后用温和的PBS清洗两遍后将细胞悬浮在1X的结合缓冲液中,浓度调整为1×106/ml; 1. After digesting the cells, wash them twice with mild PBS, suspend the cells in 1X binding buffer, and adjust the concentration to 1×10 6 /ml;
2.取100ul,1×105细胞数充分混合均匀的细胞悬液至流式试剂管标记待 用; 2. Take 100ul, 1× 105 cell number, fully mix the cell suspension and label it in the flow reagent tube for use;
3.加入5ul Annexin V-FITC和5ul PI,轻轻混匀; 3. Add 5ul Annexin V-FITC and 5ul PI, mix gently;
4.加入400ul Binding Buffer,室温避光孵育15min,立即上机检测。 4. Add 400ul Binding Buffer, incubate at room temperature in the dark for 15 minutes, and immediately test on the machine. the
(4)Tunel染色检测 (4) Tunel staining detection
1.新鲜固定液固定风干细胞样本1h15-25℃; 1. Fix air-dried cell samples with fresh fixative solution for 1h15-25℃;
2.PBS漂洗2次; 2. Rinse twice with PBS;
3.蛋白记号笔画圈,封闭液孵育10min15-25℃; 3. Draw a circle with a protein marker and incubate in blocking solution for 10 minutes at 15-25°C;
4.PBS漂洗2次; 4. Rinse twice with PBS;
5.加细胞通透液孵育2min(冰上); 5. Add cell permeabilization solution and incubate for 2 minutes (on ice);
6.PBS漂洗2次; 6. Rinse twice with PBS;
7.玻片干后,加50μl TUNEL反应混合液(阴性对照组仅加50μl荧光素标记的dUTP液)于标本上,加盖玻片或封口膜在暗湿盒中反应37℃×1h。 7. After the slides are dry, add 50 μl of TUNEL reaction mixture (the negative control group only adds 50 μl of fluorescein-labeled dUTP solution) on the specimens, add a cover glass or a parafilm and react in a dark and humid box at 37°C for 1h. the
8.PBS漂洗3次; 8. Rinse with PBS 3 times;
9.可以加1滴PBS在荧光显微镜下计数凋亡细胞(激发光波长为450~550nm,检测波长为515~565nm。 9. Add 1 drop of PBS to count apoptotic cells under a fluorescence microscope (excitation light wavelength is 450-550nm, detection wavelength is 515-565nm.
用光学显微镜观察凋亡细胞(共计200~500个细胞)并拍照。可结合凋亡细胞形态特征来综合判断(未染色细胞变小,胞膜完整但出现发泡现象,晚期出现凋亡小体,贴壁细胞出现邹缩、变圆、脱落;而染色细胞呈现染色质浓缩、边缘化,核膜裂解,染色质分割成块状/凋亡小体) Apoptotic cells (200-500 cells in total) were observed and photographed with an optical microscope. The morphological characteristics of apoptotic cells can be combined to make a comprehensive judgment (unstained cells become smaller, the cell membrane is complete but foaming occurs, apoptotic bodies appear in the late stage, adherent cells shrink, become round, and fall off; while stained cells show staining chromatin condensation, marginalization, nuclear envelope cleavage, chromatin segmentation into clumps/apoptotic bodies)
(5)转染过表达miR-302s后SK细胞凋亡过程中相关指标的变化情况 (5) Changes of related indicators in the apoptosis process of SK cells after transfection and overexpression of miR-302s
SK-N-SH细胞株持续转染24h,转染后48h时间点,qPCR检测Mcl-1,CCND-1,CASP3,BAX等表达情况。 The SK-N-SH cell line was continuously transfected for 24 hours, and the expression of Mcl-1, CCND-1, CASP3, BAX, etc. was detected by qPCR at the time point of 48 hours after transfection. the
SK-N-SH细胞株持续转染24h,转染后48h,72h时间点,qPCR检测BMI-1,p16Ink4a,p53等表达情况。 The SK-N-SH cell line was continuously transfected for 24 hours. At 48 hours and 72 hours after transfection, the expression of BMI-1, p16Ink4a, p53, etc. was detected by qPCR. the
SK-N-SH细胞株持续转染24h,转染后48h,72h时间点,Western Blotting检测Mcl-1,Caspase3Cleaved,BMI-1,p16Ink4a,p53等表达情况。 The SK-N-SH cell line was continuously transfected for 24 hours, and the expression of Mcl-1, Caspase3Cleaved, BMI-1, p16Ink4a, p53, etc. was detected by Western Blotting at 48h and 72h after transfection. the
2、实验结果 2. Experimental results
(1)Hoechst33342染色结果 (1) Hoechst33342 staining results
Hoechst33342染色实验结果如图18所示,细胞凋亡结果如图19以及表9所示: The results of the Hoechst33342 staining experiment are shown in Figure 18, and the apoptosis results are shown in Figure 19 and Table 9:
表9 SK-N-SH细胞感染后48hHoechst33342染色检测凋亡结果 Table 9 Apoptosis results detected by Hoechst33342 staining 48h after infection of SK-N-SH cells
由Hoechst33342染色结果可以看出,含microR-302s病毒组的SK-N-SH细胞凋亡情况显著高于正常对照组,说明在肿瘤细胞内转入microR-302s可以诱导肿瘤细胞凋亡。 From the results of Hoechst33342 staining, it can be seen that the apoptosis of SK-N-SH cells in the microR-302s virus group was significantly higher than that in the normal control group, indicating that the transfer of microR-302s into tumor cells can induce tumor cell apoptosis. the
(2)流式细胞仪检测结果 (2) Flow cytometry test results
流式细胞仪检测结果如图20~21以及表10~11所示: The test results of flow cytometry are shown in Figures 20-21 and Tables 10-11:
表10 流失细胞技术检测miR-302s过表达慢病毒转染后48h时间点SK-N-SH细胞凋亡率的变化情况 Table 10 The change of apoptosis rate of SK-N-SH cells at 48 hours after miR-302s overexpression lentivirus transfection detected by cell loss technique
表11流失细胞技术检测miR-302s过表达慢病毒转染后72h时间点SK-N-SH细胞凋亡率的变化情况 Table 11 The change of apoptosis rate of SK-N-SH cells at 72 hours after miR-302s overexpression lentivirus transfection detected by cell loss technique
根据流式细胞检测结果可以看出,含microR-302s病毒组的SK-N-SH细胞凋亡情况显著高于正常对照组和空载体病毒组,说明在肿瘤细胞内转入microR-302s可以诱导肿瘤细胞凋亡。 According to the results of flow cytometry, it can be seen that the apoptosis of SK-N-SH cells in the microR-302s virus group was significantly higher than that in the normal control group and the empty vector virus group, indicating that the transfer of microR-302s into tumor cells can induce Tumor cell apoptosis. the
(3)Tunel染色检测结果 (3) Tunel staining test results
Tunel染色实验结果如图22所示,细胞凋亡结果如图23以及表12所示: The results of the Tunel staining experiment are shown in Figure 22, and the apoptosis results are shown in Figure 23 and Table 12:
表12 SK-N-SH细胞感染后48h Tunel染色检测凋亡结果 Table 12 Apoptosis results detected by Tunel staining 48h after infection of SK-N-SH cells
由Tunel染色结果可以看出,含microR-302s病毒组的SK-N-SH细胞凋亡情况显著高于正常对照组,说明在肿瘤细胞内转入microR-302s可以诱导肿瘤细胞凋亡。 It can be seen from the results of Tunel staining that the apoptosis of SK-N-SH cells in the microR-302s virus group was significantly higher than that in the normal control group, indicating that the transfer of microR-302s into tumor cells can induce tumor cell apoptosis. the
(4)转染过表达miR-302s后SK细胞凋亡过程中相关指标的变化情况 (4) Changes of related indicators in the apoptosis process of SK cells after transfection and overexpression of miR-302s
转染过表达miR-302s后SK细胞凋亡过程中相关指标的变化情况如图24~32以及表13~15所示: The changes of relevant indicators in the apoptosis process of SK cells after transfection and overexpression of miR-302s are shown in Figures 24-32 and Tables 13-15:
表13 BMI-1在SK正常细胞核miR-302s转染细胞中的表达比较 Table 13 Comparison of expression of BMI-1 in SK normal nuclei miR-302s transfected cells
表14 p16Ink4a在SK正常细胞核miR-302s转染细胞中的表达比较 Table 14 Comparison of expression of p16Ink4a in SK normal nuclei miR-302s transfected cells
表15 p53在SK正常细胞核miR-302s转染细胞中的表达比较 Table 15 Comparison of expression of p53 in SK normal nuclei miR-302s transfected cells
实验结果说明,含microR-302s病毒组的SK-N-SH细胞中,涉及细胞凋亡的指标显著高于正常对照组,说明在肿瘤细胞内转入microR-302s可以诱导肿瘤细胞凋亡。 The experimental results showed that in the SK-N-SH cells containing the microR-302s virus group, the indicators related to cell apoptosis were significantly higher than those in the normal control group, indicating that the transfer of microR-302s into tumor cells can induce tumor cell apoptosis. the
上述各种检测结果说明,含microR-302s(SEQ ID NO.5所示的核苷酸序列)病毒组的SK-N-SH细胞的凋亡情况显著高于正常对照组,说明在肿瘤细胞内转入microR-302s可以诱导肿瘤细胞凋亡,microR-302s可以用于制备抗肿瘤药物。 The above various detection results show that the apoptosis of SK-N-SH cells in the virus group containing microR-302s (nucleotide sequence shown in SEQ ID NO.5) is significantly higher than that in the normal control group, indicating that in tumor cells Introducing microR-302s can induce tumor cell apoptosis, and microR-302s can be used to prepare antitumor drugs. the
实施例4 体内抑瘤实验 Example 4 In vivo tumor suppression experiment
1、材料与方法: 1. Materials and methods:
1.1实验动物 1.1 Experimental animals
Balb/c裸鼠十只,雄性,同周龄,周龄都在4~6w,购自四川成都市达硕生物科技有限公司。饲养与四川大学华西医院动物实验中心,层流净化室内饲养,笼子、垫料、水和食物均经过灭菌处理,SPF级饲养一周,接种前体重均在16~20g之间。 Ten Balb/c nude mice, male, of the same age, all 4-6 weeks old, were purchased from Dashuo Biotechnology Co., Ltd., Chengdu, Sichuan. Breeding and Animal Experiment Center of West China Hospital of Sichuan University, rearing in a laminar flow purification room, cages, bedding, water and food are all sterilized, SPF grade feeding for one week, and the body weight before inoculation is between 16 and 20g. the
1.2细胞株 1.2 Cell lines
人神经母细胞瘤株SK-N-MC购自中国协和医科大学基础医学研究所医学细胞中心,于5%CO2、37℃、饱和湿度,培养在10%胎牛血清、加双抗的MEM培养液中。细胞生长至约80%融合度时用0.25%胰酶消化,1:2或1:3传代。实验细胞均处于对数生长期。 The human neuroblastoma line SK-N-MC was purchased from the Medical Cell Center of the Institute of Basic Medical Sciences, Peking Union Medical College, China. It was cultured in MEM with 10% fetal bovine serum and double antibodies at 5% CO2, 37°C, and saturated humidity. in the liquid. When the cells grow to about 80% confluence, they are digested with 0.25% trypsin, and passaged at 1:2 or 1:3. All experimental cells were in logarithmic growth phase. the
2、主要实验试剂 2. Main experimental reagents
microRNA320a、microRNA320b、microRNA320c、microRNA320d agomir(双链RNA),Negative Control agomir(广州锐博生物科技有限公司) microRNA320a, microRNA320b, microRNA320c, microRNA320d agomir (double-stranded RNA), Negative Control agomir (Guangzhou Ruibo Biotechnology Co., Ltd.)
miR-302a:CCACCACUUAAACGUGGAUGUACUUGCUUUGAAACUAAAGAAGUAAGUGCUUCCAUGUUUUGGUGAUGG; miR-302a:CCACCACUUAAACGUGGAUGUACUUGCUUUGAAACUAAAAGAAGUAAGUGCUUCCAUGUUUUGGUGAUGG;
miR-302b:GCUCCCUUCAACUUUAACAUGGAAGUGCUUUCUGUGACUUUAAAAGUAAGUGCUUCCAUGUUUUAGUAGGAGU; miR-302b:GCUCCCUUCAACUUUAACAUGGAAGUGCUUUCUGUGACUUUAAAAGUAAGUGCUUCCAUGUUUUUAGUAGGAGU;
miR-302c:CCUUUGCUUUAACAUGGGGGUACCUGCUGUGUGAAACAAAAGUAAGUGCUUCCAUGUUUCAGUGGAGG; miR-302c:CCUUUGCUUUUAACAUGGGGGUACCUGCUGUGUGAAACAAAAGUAAGUGCUUCCAUGUUUCAGUGGAGG;
miR-302d:CCUCUACUUUAACAUGGAGGCACUUGCUGUGACAUGACAAAAAUAAGUGCUUCCAUGUUUGAGUGUGG。 miR-302d: CCUCUACUUUAACAUGGAGGCACUUGCUGUGACAUGACAAAAAAUAAGUGCUUCCAUGUUUUGAGUGUGG. the
Negative Control:名称为cel-miR-239b-5p,miRNA编号: Negative Control: the name is cel-miR-239b-5p, miRNA number:
MIMAT0000295,序列:UUUGUACUACACAAAAGUACUG MIMAT0000295, sequence: UUUGUACUACACAAAAGUACUG
HyClone MEM培养基(美国Thermo Scientific公司) HyClone MEM medium (Thermo Scientific, USA)
HyClone 胎牛血清(美国Thermo Scientific公司) HyClone Fetal Bovine Serum (Thermo Scientific, USA)
3、主要实验仪器 3. Main experimental instruments
3.1、恒温细胞培养箱(美国Thermo Scientific公司) 3.1. Constant temperature cell incubator (Thermo Scientific, USA)
3.2、研究生物显微镜(日本Olympus公司) 3.2. Research biological microscope (Olympus, Japan)
3.3、游标卡尺(上海申韩量具有限公司) 3.3 Vernier caliper (Shanghai Shenhan Measuring Tools Co., Ltd.)
3.4、电子秤(德国Sartorius公司) 3.4. Electronic scale (Germany Sartorius company)
4、实验方法 4. Experimental method
4.1细胞培养 4.1 Cell culture
4.11、细胞培养用液 4.11. Liquid for cell culture
(1)10×PBS缓冲液(细胞培养,pH7.2~7.4):KCl2.0g+KH2PO42.0g+NaCl80.0g+NaHPO4.12H2O20.8g,补充ddH2O至1000ml,充分溶解,高温灭菌,-20℃保存。使用时稀释10倍。 (1) 10×PBS buffer (cell culture , pH7.2~7.4): KCl2.0g+KH2PO42.0g+NaCl80.0g+ NaHPO4.12H2O20.8g , add ddH2O to 1000ml, fully dissolve, Sterilize at high temperature and store at -20°C. Dilute 10 times when used.
(2)胰酶细胞消化液:胰酶0.5g+1×PBS缓冲液200ml+EDTA0.02g,溶解1~2h,调节pH值7.5,0.22μm滤器过滤,分装,-20℃保存。 (2) Trypsin cell digestion solution: trypsin 0.5g + 1×PBS buffer 200ml + EDTA 0.02g, dissolve for 1-2 hours, adjust the pH value to 7.5, filter with a 0.22μm filter, aliquot, and store at -20°C. the
(3)青链霉素(PS)液:100万U青霉素(1g)+100万U链霉素,溶于100ml ddH2O,0.22μm滤器过滤,分装,-20℃保存。 (3) Penicillin (PS) solution: 1 million U penicillin (1 g) + 1 million U streptomycin, dissolved in 100 ml ddH 2 O, filtered through a 0.22 μm filter, aliquoted, and stored at -20°C.
(4)L-谷氨酰胺溶液:L-谷氨酰胺3.0g溶于100ml ddH2O,0.22μm滤器过滤,分装,-20℃保存。使用时稀释100倍。 (4) L-glutamine solution: Dissolve 3.0g of L-glutamine in 100ml of ddH2O, filter through a 0.22μm filter, subpackage, and store at -20°C. Dilute 100 times when used. the
(5)NaHCO3溶液(5.6%):5.6g NaHCO3溶于100ml ddH2O,0.22μm滤器过滤或高温灭菌,分装,-20℃保存。 (5) NaHCO 3 solution (5.6%): 5.6g NaHCO 3 was dissolved in 100ml ddH2O, filtered through a 0.22 μm filter or sterilized at high temperature, aliquoted, and stored at -20°C.
(6)HEPES溶液(储存液1500~2000mmol/L):36~50g HEPES溶于100ml ddH=O中,0.22μm滤器过滤,分装,-20℃保存。使用时稀释100倍(终浓度为15~20mmol/L)。 (6) HEPES solution (stock solution 1500-2000mmol/L): 36-50g HEPES dissolved in 100ml ddH=O, filtered through a 0.22μm filter, aliquoted, and stored at -20°C. Dilute 100 times when used (final concentration is 15-20mmol/L). the
(7)MEM培养液:MEM85ml+胎牛血清(FBS)10ml+L-谷氨酰胺1ml+青链霉素1ml,用NaHCO3调整pH为7.2,4℃保存。 (7) MEM culture medium: MEM85ml + fetal bovine serum (FBS) 10ml + L-glutamine 1ml + penicillin streptomycin 1ml, adjust pH to 7.2 with NaHCO 3 , store at 4°C.
4.12、细胞复苏 4.12. Cell Recovery
4.13、细胞传代 4.13. Cell passage
4.2、裸鼠人神经母细胞瘤SK-N-MC皮下移植瘤模型建立以及处理 4.2. Establishment and treatment of subcutaneous xenograft model of human neuroblastoma SK-N-MC in nude mice
4.2.1移植瘤模型 4.2.1 Transplanted tumor model
取对数生长期SK-N-MC细胞,胰蛋白酶消化后,配成PBS单细胞悬液,调整细胞密度配成5×107/ml,分别接种于裸鼠右侧腋窝皮下,每次每点注射液体量为0.2ml,以皮下结节直径5mm左右为成瘤标准,进行药物注射。 Take the SK-N-MC cells in the logarithmic growth phase, digest them with trypsin, make a PBS single cell suspension, adjust the cell density to 5×10 7 /ml, and inoculate them subcutaneously in the right armpit of nude mice, each time The volume of injection liquid is 0.2ml, and the subcutaneous nodule diameter is about 5mm as the standard for tumor formation, and the drug injection is carried out.
4.2.2实验分组以及处理干预 4.2.2 Experimental grouping and treatment intervention
观察移植瘤的生长情况,第10天移植瘤平均直径大于5mm,先于给药前称重,按体重从小到大编号,按随机数字表第8行前十个数字,23,68,35,26,00,99,53,93,61,28。把随机数字从1到10排列,1到5对应的裸鼠分到对照组,6到10对应的裸鼠分到实验组。然后测量各组肿瘤的大小,干扰前两组裸鼠生长状态良好,计算体重(如图33)和肿瘤体积(如图34)差异无统计学意义, 各项指标均无统计学意义。两组分别进行如下处理:对照组:瘤内多点注射negative control agomir,4nmol/只,溶于30ul生理盐水中,每四天一次。实验组:瘤内多点注射microRNA320a、microRNA320b、microRNA320c、microRNA320d agomir各1nmol,共4nmol/只,溶于30ul生理盐水中,每四天一次。 Observe the growth of transplanted tumors. On the 10th day, the average diameter of transplanted tumors is greater than 5mm. Weigh them before administration, number them from small to large, and use the first ten numbers in line 8 of the random number table, 23, 68, 35, 26, 00, 99, 53, 93, 61, 28. Arrange the random numbers from 1 to 10, assign the nude mice corresponding to 1 to 5 to the control group, and assign the nude mice corresponding to 6 to 10 to the experimental group. Then the size of the tumors in each group was measured. Before the interference, the two groups of nude mice grew in good condition, and there was no statistically significant difference in calculated body weight (as shown in Figure 33) and tumor volume (as shown in Figure 34), and all indicators had no statistical significance. The two groups were treated as follows: Control group: intratumoral multi-point injection of negative control agomir, 4nmol/mole, dissolved in 30ul normal saline, once every four days. Experimental group: 1 nmol each of microRNA320a, microRNA320b, microRNA320c, and microRNA320d agomir were injected into the tumor at multiple points, a total of 4 nmol per mouse, dissolved in 30ul normal saline, once every four days. the
4.2.3一般情况观察及瘤体测量 4.2.3 General observation and tumor measurement
给药期间每日观察各组裸鼠的精神状态、行动、饮食变化以及灵活性等一般情况。检测肿瘤生长情况,每三天用游标卡尺测量皮下肿瘤长泾(L)和短径(W),并计算肿瘤体积,绘制肿瘤生长曲线。同时每三天称裸鼠体重。 During the administration period, the mental state, behavior, diet changes and flexibility of the nude mice in each group were observed every day. The growth of the tumor was detected, and the long diameter (L) and short diameter (W) of the subcutaneous tumor were measured with a vernier caliper every three days, and the tumor volume was calculated, and the tumor growth curve was drawn. At the same time, the body weight of the nude mice was weighed every three days. the
肿瘤体积(V)=(LW2)/2 Tumor volume (V) = (LW 2 )/2
4.2.4裸鼠处死 4.2.4 Nude mice were killed
最后一次注射药物后四天称裸鼠体重,测量体积并计算肿瘤体积增长倍数,麻醉后处死两组裸鼠,用手术器械完整取出移植瘤,称瘤重记录,拍两组瘤体照片。计算抑瘤率。 Four days after the last drug injection, the nude mice were weighed, the volume was measured and the growth multiple of the tumor volume was calculated. The two groups of nude mice were killed after anesthesia, and the transplanted tumors were completely removed with surgical instruments. Calculate the tumor inhibition rate. the
抑瘤率=(1-实验组平均瘤重/对照组平均瘤重)×100% Tumor inhibition rate=(1-average tumor weight of experimental group/average tumor weight of control group)×100%
4.4统计学分析 4.4 Statistical analysis
采用SPSS16.0软件进行统计分析。所有数据均以均数±标准差表示。两样本间的比较采用t检验。双侧α=0.05为检验标准,P<0.05认为差异有统计学意义。 SPSS16.0 software was used for statistical analysis. All data are presented as mean ± standard deviation. The comparison between two samples was performed by t test. Two-sided α=0.05 is the test standard, and P<0.05 is considered statistically significant. the
5、实验结果 5. Experimental results
1、干预过程中裸鼠生长情况以及毒副作用观察 1. Observation on growth of nude mice and observation of toxic and side effects during the intervention process
干预期间两组荷瘤裸鼠生长状态良好,无一只死亡,干预过程中未发现毒性作用,饮食正常,精神状态良好,活动状态良好。 During the intervention period, the tumor-bearing nude mice in the two groups grew well, and none of them died. No toxic effect was found during the intervention process. They had a normal diet, a good mental state, and a good activity state. the
2、裸鼠成瘤情况 2. Tumor formation in nude mice
10只裸鼠接种细胞后,第五天见皮下结节形成,并逐渐长大,成瘤率100%。第10天开始给予药物注射,移植瘤成圆形或卵圆形,给药前瘤体表面光滑,随着注射药物,部分瘤体变得不规则,有结痂形成。最后一次注射药物四天后,处死所有裸鼠,取移植瘤,经解剖,未发现有淋巴结转移,各脏器未见异常。取瘤组织HE染色,证实为神经母细胞瘤(NB)。 After 10 nude mice were inoculated with cells, subcutaneous nodules formed on the fifth day and grew gradually, with a tumor formation rate of 100%. Drug injections were given on the 10th day. The transplanted tumors were round or oval. Four days after the last drug injection, all the nude mice were killed, and the transplanted tumors were taken out. After dissection, no lymph node metastasis was found, and no abnormality was found in each organ. HE staining of tumor tissue was confirmed as neuroblastoma (NB). the
3、分组处理前两组荷瘤裸鼠肿瘤体积和体重的均衡性 3. Balance of tumor volume and body weight of two groups of tumor-bearing nude mice before grouping
两组荷瘤裸鼠干预前肿瘤体积和体重(如图33,34),经t检验差异均无统计学意义(体重:F=0.502P=0.775。肿瘤体积:F=0.001P=0.359),两组荷瘤裸鼠生长状态均良好。表明两组荷瘤裸鼠在干预前具有均衡性。 The tumor volume and body weight of the two groups of tumor-bearing nude mice before intervention (as shown in Figures 33 and 34) had no statistically significant difference by t test (body weight: F=0.502P=0.775; tumor volume: F=0.001P=0.359), The tumor-bearing nude mice in the two groups were in good growth condition. It indicated that the two groups of tumor-bearing nude mice were balanced before the intervention. the
4、裸鼠移植瘤生长状态 4. Growth status of transplanted tumor in nude mice
观察过程中,发现干预后实验组荷瘤裸鼠的肿瘤生长明显慢于对照组。 移植瘤生长曲线图如图41和图42。 During the observation process, it was found that the tumor growth in the experimental group was significantly slower than that in the control group after the intervention. The growth curves of transplanted tumors are shown in Figure 41 and Figure 42. the
处死前称重如图35(对照组:23.38±1.06g,实验组:23.62±1.28g),两组平均体重比较差异无统计学意义(F=1.427P=0.718)。 The weight before sacrifice was shown in Figure 35 (control group: 23.38±1.06g, experimental group: 23.62±1.28g), and there was no significant difference in average body weight between the two groups (F=1.427P=0.718). the
处死前移植瘤活体比较如图37和图38,实验组荷瘤裸鼠的肿瘤生长明显慢于对照组。处死前测得两组肿瘤体积比较如表图36(对照组:2520.37±738.94mm3,实验组:968.08±708.49mm3),差异有统计学意义(F=0.058P=0.009)。 Comparison of transplanted tumors in vivo before sacrifice is shown in Figure 37 and Figure 38. The tumor growth of the tumor-bearing nude mice in the experimental group was significantly slower than that in the control group. The comparison of tumor volume between the two groups measured before sacrifice is shown in Table 36 (control group: 2520.37±738.94mm3, experimental group: 968.08±708.49mm3), and the difference was statistically significant (F=0.058P=0.009). the
处死后取得两组移植瘤,如图40所示,实验组荷瘤裸鼠的肿瘤明显小于对照组;对两组移植瘤称重,瘤重比较如图39(对照组2.03±0.91g,实验组0.81±0.75g),差异有统计学意义(F=0.037P=0.048),抑瘤率=1-0.81/2.03=60.10%。 Two groups of transplanted tumors were obtained after being executed, as shown in Figure 40, the tumors of the tumor-bearing nude mice in the experimental group were significantly smaller than those of the control group; the transplanted tumors of the two groups were weighed, and the tumor weights were compared as shown in Figure 39 (the control group 2.03±0.91g, the experimental group group (0.81±0.75g), the difference was statistically significant (F=0.037P=0.048), tumor inhibition rate=1-0.81/2.03=60.10%. the
移植瘤增长倍数如图43,实验组明显低于对照组(P<0.05)。 The growth rate of transplanted tumors is shown in Figure 43, and the experimental group was significantly lower than the control group (P<0.05). the
本实验通过将人神经母细胞瘤细胞株SK-N-MC细胞悬液接种于裸鼠右侧腋窝皮下,成功构建了人神经母细胞瘤裸鼠移植瘤模型。以microRNA320a、microRNA320b、microRNA320c和microRNA320d作为药物干预,进行瘤内多点注射,并且以Negative Control作为阴性对照,用药四次后,两组裸鼠的平均体重无统计学差异。而实验组的移植瘤生长明显慢于对照组,甚至有移植瘤缩小的表现,用药结束后,实验组的移植瘤的体积明显小于对照组,差异有统计学意义。且称量移植瘤的重量显示,实验组的移植瘤重量明显小于对照组,差异有统计学意义,抑瘤率为60.1%。 In this experiment, the human neuroblastoma cell line SK-N-MC cell suspension was inoculated subcutaneously in the right axilla of nude mice, and a nude mouse xenograft tumor model of human neuroblastoma was successfully constructed. With microRNA320a, microRNA320b, microRNA320c and microRNA320d as drug intervention, multi-point intratumoral injection was performed, and Negative Control was used as a negative control. After four times of administration, there was no statistical difference in the average body weight of nude mice between the two groups. However, the growth of transplanted tumors in the experimental group was significantly slower than that in the control group, and even the transplanted tumors shrank. And weighing the weight of the transplanted tumor showed that the weight of the transplanted tumor in the experimental group was significantly smaller than that in the control group, the difference was statistically significant, and the tumor inhibition rate was 60.1%. the
实验结果说明,表明microRNA320a、microRNA320b、microRNA320c和microRNA320d(SEQ ID NO.1~4所示的核苷酸序列)有抗肿瘤作用,可用于制备抗肿瘤药物,治疗神经母细胞瘤等肿瘤。 The experimental results show that microRNA320a, microRNA320b, microRNA320c and microRNA320d (nucleotide sequences shown in SEQ ID NO.1-4) have anti-tumor effects, and can be used to prepare anti-tumor drugs and treat tumors such as neuroblastoma. the
实施例5 本发明筛查试剂盒 Example 5 Screening kit of the present invention
1、本发明试剂盒(50人份) 1. Kit of the present invention (50 servings)
(1)总RNA提取试剂 (1) Total RNA extraction reagents
(2)逆转录试剂 (2) Reverse transcription reagents
(3)Real-time PCR检测试剂 (3) Real-time PCR detection reagent
上游引物: Upstream primer:
MiR302a3PF:5’AAGTGCTTCCATGTTTTCCT3’Tm(JS)56 MiR302a3PF:5'AAGTGCTTCCATGTTTTCCT3'Tm(JS)56
MiR302b3PF:5’AAGTGCTTCCATGTTTTAGT3’Tm(JS)54 MiR302b3PF:5'AAGTGCTTCCATGTTTTAGT3'Tm(JS)54
MiR302c3PF:5’AAGTGCTTCCATGTTTCAGT3’Tm(JS)56 MiR302c3PF:5'AAGTGCTTCCATGTTTCAGT3'Tm(JS)56
MiR302d3PF:5’GTGCTTCCATGTTTGAGTGT3’Tm(JS)58 MiR302d3PF:5'GTGCTTCCATGTTTGAGTGT3'Tm(JS)58
下游通用引物:5'-CAGTGCTGGGTCCGAGTGA-3' Downstream universal primer: 5'-CAGTGCTGGGTCCGAGTGA-3'
TaqMan probe:5'-FAM-TCGTATCCAGTGCGAATCACTC-TAMRA-3' TaqMan probe: 5'-FAM-TCGTATCCAGTGCGAATCACTC-TAMRA-3'
2、本发明试剂盒使用方法 2. The method of using the kit of the present invention
(1)细胞株总的RNA提取(Trizol法); (1) Total RNA extraction of cell lines (Trizol method);
(2)逆转录反应(茎环逆转录stem-loop两步法:RT1:70℃5min立即冰浴;RT2:16℃30min,42℃30min,85℃5min); (2) Reverse transcription reaction (two-step stem-loop reverse transcription stem-loop method: RT1: 70°C for 5 minutes and ice bath immediately; RT2: 16°C for 30 minutes, 42°C for 30 minutes, 85°C for 5 minutes);
(3)实时荧光定量PCR(Taqman)探针PCR技术(94℃3min预变性;两步法:94℃20S,60℃40S); (3) Real-time fluorescence quantitative PCR (Taqman) probe PCR technology (94°C 3min pre-denaturation; two-step method: 94°C 20S, 60°C 40S);
(4)数据统计和分析。 (4) Data statistics and analysis. the
实施例6 本发明筛查试剂盒 Example 6 Screening kit of the present invention
1、本发明试剂盒(50人份) 1. Kit of the present invention (50 servings)
(1)总RNA提取试剂 (1) Total RNA extraction reagents
(2)逆转录试剂 (2) Reverse transcription reagents
(3)Real-time PCR检测试剂 (3) Real-time PCR detection reagent
BMI-1上游引物: BMI-1 upstream primer:
hBMI1F-1:5’GAAATCTAAGGAGGAGGTGA3’456Tm(P5)50.8,Tm(JS)58 hBMI1F-1:5'GAAATCTAAGGAGGAGGTGA3'456Tm(P5)50.8,Tm(JS)58
BMI-1下游引物: BMI-1 downstream primer:
hBMI1R-1:5’catacatgacatcaatctgga3’ hBMI1R-1:5'catacatgacatcaatctgga3'
586Tm(P5)50.9,Tm(JS)56131bp。 586Tm (P5) 50.9, Tm (JS) 56131bp. the
2、本发明试剂盒使用方法 2. The method of using the kit of the present invention
(1)细胞株总的RNA提取(Trizol法),同上一RNA提取试剂盒; (1) Total RNA extraction of cell lines (Trizol method), the same as the previous RNA extraction kit;
(2)逆转录反应(普通逆转录反应,两步法:RT1:70℃5min立即冰浴;RT2:20℃10min,40℃60min,70℃10min); (2) Reverse transcription reaction (ordinary reverse transcription reaction, two-step method: RT1: 70°C for 5 minutes and ice bath immediately; RT2: 20°C for 10 minutes, 40°C for 60 minutes, 70°C for 10 minutes);
(3)实时荧光定量PCR技术(SYBGREEN荧光染料法94℃3min预变性;三步法40个循环:94℃30S,62℃40S,72℃1min;72℃5min); (3) Real-time fluorescent quantitative PCR technology (SYBGREEN fluorescent dye method 94°C 3min pre-denaturation; three-step method 40 cycles: 94°C 30S, 62°C 40S, 72°C 1min; 72°C 5min);
(4)数据统计和分析。 (4) Data statistics and analysis. the
综上,microR-302a在肿瘤细胞中表达水平极显著低于正常细胞,可以通过检测microR-302a表达水平筛查待检细胞是否为肿瘤细胞。同时,本发明5种核苷酸序列可以有效诱导肿瘤细胞凋亡,抑制肿瘤增生,可以治疗肿瘤。 In summary, the expression level of microR-302a in tumor cells is significantly lower than that in normal cells, and whether the cells to be tested are tumor cells can be screened by detecting the expression level of microR-302a. At the same time, the five nucleotide sequences of the present invention can effectively induce tumor cell apoptosis, inhibit tumor proliferation and treat tumors. the
Claims (14)
- Nucleotide sequence shown in 1.SEQ ID NO.1 ~ 5.
- Any one or any number of sequences in nucleotide sequence shown in 2.SEQ ID NO.1 ~ 5 are preparing the purposes in antitumor drug.
- 3. purposes according to claim 2, is characterized in that: described antitumor drug is anti-neuroma medicine.
- 4. purposes according to claim 3, is characterized in that: described anti-neuroma medicine is anti-neuroblast tumor medicine.
- 5. a recombinant plasmid, is characterized in that: it comprises the nucleotide sequence shown in any one of SEQ ID NO.1 ~ 5.
- 6. recombinant plasmid according to claim 5, is characterized in that: it is restructuring GV266 plasmid.
- 7. a recombinant slow virus, is characterized in that: it comprises the nucleotide sequence shown in any one of SEQ ID NO.1 ~ 5.
- 8. a recombinant slow virus, is characterized in that: it comprises recombinant plasmid described in claim 5 or 6.
- 9. recombinant plasmid described in claim 5 ~ 8 or recombinant slow virus are preparing the purposes in antitumor drug.
- 10. purposes according to claim 9, is characterized in that: described antitumor drug is anti-neuroma medicine.
- 11. purposes according to claim 10, is characterized in that: described anti-neuroma medicine is anti-neuroblast tumor medicine.
- 12. 1 kinds of tumor screening test kits, is characterized in that: it comprises the reagent detecting cell microRNA302a expression level.
- 13. test kits according to claim 12, is characterized in that: described tumour is neuroma.
- 14. test kits according to claim 13, is characterized in that: described neuroma is neuroblastoma.
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CN113577309A (en) * | 2020-04-30 | 2021-11-02 | 四川大学 | Application of miR-302b-3p as oral squamous cell carcinoma anti-tumor marker |
Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN102656268A (en) * | 2009-08-26 | 2012-09-05 | 林希龙 | Development of universal cancer drugs and vaccines |
CN102772806A (en) * | 2012-07-11 | 2012-11-14 | 中国科学技术大学 | Application of micromolecular nucleic acid miR-302 for treating or preventing testicular cancer |
US20130102768A1 (en) * | 2007-12-10 | 2013-04-25 | Kyoto University | Efficient method for nuclear reprogramming |
-
2014
- 2014-06-30 CN CN201410304621.9A patent/CN104293785A/en active Pending
Patent Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20130102768A1 (en) * | 2007-12-10 | 2013-04-25 | Kyoto University | Efficient method for nuclear reprogramming |
CN102656268A (en) * | 2009-08-26 | 2012-09-05 | 林希龙 | Development of universal cancer drugs and vaccines |
CN102772806A (en) * | 2012-07-11 | 2012-11-14 | 中国科学技术大学 | Application of micromolecular nucleic acid miR-302 for treating or preventing testicular cancer |
Non-Patent Citations (2)
Title |
---|
SCHEEL ANDREAS HANS JOACHIM ET AL: "Immunofluorescence-based screening identifies germ cell associated microRNA 302 as an antagonist to p63 expression", 《CELL CYCLE》 * |
葛秋燕 等: "人微小RNA-302s表达载体的构建及其对细胞周期的影响", 《中国细胞生物学学报》 * |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN113577309A (en) * | 2020-04-30 | 2021-11-02 | 四川大学 | Application of miR-302b-3p as oral squamous cell carcinoma anti-tumor marker |
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